Publications list
Filters: First Letter Of Last Name is S [Clear All Filters]
Partial complementation of Sinorhizobium meliloti bacA mutant phenotypes by the Mycobacterium tuberculosis BacA protein. Journal of Bacteriology. 195:389-398.
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2013.
Paraburkholderia youngii sp. nov. and 'Paraburkholderia atlantica' - Brazilian and Mexican Mimosa-associated rhizobia that were previously known as Paraburkholderia tuberum sv. Mimosae. Systematic and Applied Microbiology. 44:ArticleNo.126152.
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2021.
Pantoea ananatis utilizes a type VI secretion system for pathogenesis and bacterial competition. Molecular Plant-Microbe Interactions. 28:420-431.
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2015.
p15 encoded by Garlic virus X is a pathogenicity factor and RNA silencing suppressor. Journal of General Virology. 99:1515-1521.
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2018.
Overview of holistic application of biogas for small scale farmers in Sub-Saharan Africa. Biomass and Bioenergy. 70:4-16.
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2014.
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2016.
Overriding importance of water table in the greenhouse gas balance of managed peatlands. Nature. Published online.
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2021.
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2018.
Over-seasons analysis of quantitative trait loci affecting phenolic content and antioxidant capacity in raspberry. Journal of Agricultural and Food Chemistry. 60:5360-5366.
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2012.
Origin might matter; people matter, too. A response to the comment by Rejmanek and Simberloff, 2016. Environmental Conservation. 44:100-101.
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2017.
Organophosphorus degrading bacteria: ecology and industrial applications. Nature Review Microbiology. 7(2):156-164.
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2009.
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2016.
Organic phosphorus in the terrestrial environment: a perspective on the state of the art and future priorities. Plant and Soil. 427:191-208.
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2018.
Organic phosphorus in the terrestrial environment: a perspective on the state of the art and future priorities. Plant and Soil. 427:191-208.
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2018.
Organic matter chemistry controls greenhouse gas emissions from permafrost peatlands. Soil Biology and Biochemistry. 98:42-53.
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2016.
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2022.
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2015.
Optimization of spectral pre-processing for estimating soil conditions on small farms. Soil Use and Management.
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2021.
Optimization of in vitro inhibition of HT-29 colon cancer cell cultures by Solanum tuberosum L. extracts. Food and Function. 6:72-83.
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2015.
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2013.
Optimal harvesting decision paths when timber and water have an economic value in uneven forests. Forests. 11:ArticleNo.903.
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2020.
Opportunities for mobilizing recalcitrant phosphorus from agricultural soils: a review. Plant and Soil. 427:5-16.
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2018.
Opportunities for improving phosphorus-use efficiency in crop plants. New Phytologist. 195:306-320.
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2012.
Opportunities and challenges in using catchment-scale storage estimates from cosmic ray neutron sensors for rainfall-runoff modelling. Journal of Hydrology. 586:ArticleNo.124878.
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2020.
Opportunities and challenges for terrestrial carbon offsetting and marketing, with some implications for forestry in the UK. South and East European Journal of Forestry (SEEFOR). 1:69-79.
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2011.
Operationalizing an ecosystem services-based approach using Bayesian Belief Networks: An application to a riparian buffer zone. Ecological Economics. 110:15-27.
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2015.
Operationalising ecosystem service assessment in bayesian belief networks: Experiences within the OpenNESS project. Ecosystem Services. 29:452-464.
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2017.
Operationalising ecosystem service assessment in bayesian belief networks: Experiences within the OpenNESS project. Ecosystem Services. 29:452-464.
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2018.
Operational considerations for hot-washing in potato crisp manufacture. Food and Bioproducts Processing. 124:387-396.
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2020.
Open-system chemical behavior in deep Wilcox Group mudstones, Texas Gulf. Marine and Petroleum Geology.. 27(9):1804-1818.
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2010.
The oomycete broad-host-range pathogen Phytophthora capsici. Molecular Plant Pathology. 13:329-337.
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2012.
Onsite geometric calibration of RPAS mounted sensors for SfM photogrammetric geomorphological surveys. Earth Surface Processes and Landforms..
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2022.
On the use of unmanned aerial systems for environmental monitoring. Remote Sensing. 10:ArticleNo.641.
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2018.
On the multifunctionality of hunting - an institutional analysis of eight cases from Europe and Africa. Journal of Environmental Planning and Management. 56:531-552.
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2013.
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2021.
Old and new faces of the nucleolus. Workshop on the nucleolus and disease. EMBO Reports. 10:35-40. Abstract
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2008.
The oil-contaminated soil diazotroph Azoarcus olearius DQS-4T if genetically and phenotypically similar to the model grass endophyte Azoarcus sp. BH72. Environmental Microbiology Reports. 9:223-238.
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2017.
The oil-contaminated soil diazotroph Azoarcus olearius DQS-4T if genetically and phenotypically similar to the model grass endophyte Azoarcus sp. BH72. Environmental Microbiology Reports. 9:223-238.
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2017.
Of organic farmers and "good farmers": changing habitus in rural England. Journal of Rural Studies. 28:232-240.
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2012.
The ODD protocol for describing agent-based and other simulation models: a second update to improve clarity, replication, and structural realism. Journal of Artificial Societies and Social Simulation. 23:ArticleNo.7.
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2020.
Oceanic protists with different forms of acquired phototrophy display contrasting biogeographies and abundance. Proceedings of the Royal Society B, Biological Sciences. 284:ArticleNo.1860.
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2017.
Observation of extensive chromosome axis remodeling during the "diffuse-phase" of meiosis in large genome cereals. Frontiers in Plant Science. 8:ArticleNo.1235.
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2017.
Nutritional and phytochemical content of high-protein crops. Journal of Agricultural and Food Chemistry. 64:7800-7811.
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2016.
The NuGO proof of principle study package: a collaborative research effort of the European Nutrigenomics Organisation. Genes and Nutrition. 3:147-151.
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2008.
Nucleotide sequence analysis of two lignin genes in Acacia auriculiformis x Acacia mangium hybrid for enhancement of wood pulp quality. Tree Genetics and Genome. 9:1369-1381.
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2013.
Nucleoli: Composition, function and dynamics (Review). Plant Physiology. 158:44-51.
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2012.
Nucleolar localisation of Potato leafroll virus capsid proteins. Journal of General Virology. 86:2891-2896. Abstract
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2005.
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2011.
Novel quorum sensing-controlled genes in Erwinia carotovora subsp. carotovora: identification of a fungal elicitor homologue in a soft-rotting bacterium. Molecular Plant-Microbe Interactions. 18:343-353. Abstract
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2005.
Novel microsatellite markers for the analysis of Phytophthora infestans populations. Plant Pathology. 55:311-319. Abstract
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2006.
Novel industry-government governance mechanisms for the eradication of bovine viral diarrhoea in the UK and Ireland. Journal of Rural Studies. 81:324-355.
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2021.
A novel grass hybrid to reduce flood generation in temperate regions. Nature Scientific Reports, 3, Article no.1683..
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2013.
A novel framework for linking functional diversity of plants with other trophic levels for the quantification of ecosystem services. Journal of Vegetation Science. 24:942-948.
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2013.
Novel Cupriavidus strains isolated from root nodules of native Uruguayan Mimosa species. Applied and Environmental Microbiology. 82:3150-3164.
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2016.
Novel colon-available triterpenoids identified in raspberry fruits exhibit antigenotoxic activities in vitro. Molecular Nutrition and Food Research. 61:ArticleNo.1600327.
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2017.
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2012.
A novel approach to evaluating relationships between soil test and runoff P at landscape scales by integrating farmer knowledge on soil drains. Agriculture, Ecosystems and Environment. 254:179-190.
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2018.
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2020.
Nonsense-mediated RNA decay factor UPF1 is critical for posttranscriptional and translational gene regulation in arabidopsis. The Plant Cell. Published online..
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2020.
Non-targeted metabolite profiling highlights the potential of strawberry leaves as a resource for specific bioactive compounds. Journal of the Science of Food and Agriculture. 97:2182-2190.
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2017.
Non-destructive automatic leaf area measurements by combining stereo and time-of-flight images. IET Computer Vision. 8:391-403.
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2014.
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2019.
Nodulation of Sesbania species by Rhizobium (Agrobacterium) strain IRBG74 and other Rhizobia. Environmental Microbiology. 11:2510-2525.
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2009.
Nodulation of Sesbania species by Rhizobium (Agrobacterium) strain IRBG74 and other rhizobia. Environmental Microbiology. 11(10):2510-2525.
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2009.
Nodulation of legumes from the Thar desert of India and molecular characterization of their rhizobia. Plant and Soil. 357:227-243.
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2012.
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2012.
Nodulation and nitrogen fixation by Mimosa spp. in the Cerrado and Caatinga biomes of Brazil. New Phytologist. 186:934-946.
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2010.
Nodulation and nitrogen fixation by mimosa spp. In the Cerrado and Caatinga biomes of Brazil. New Phytologist. 186(4):934-946.
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2010.
Nodulation and ecological significance of indigenous legumes in Scotland and Sweden. Symbiosis. 57:133-48.
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2012.
NO flowering. Bioessays. 27:239-241. Abstract
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2005.
No evidence requiring change in the risk assessment of Inachis io larvae. Ecological Modelling. 268:103-122.
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2013.
No evidence for extensive horizontal gene transfer in the genome of the tardigrade Hypsibius dujardini. Proceedings of the National Academy of Sciences of the United States of America. 1135053
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2016.
No evidence for compensatory thermal adaptation of soil microbial respiration in the study of Bradford et al. (2008). Ecology Letters. 12:E12-E14.
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2009.
An NMRA-like protein regulates gene expression in Phytophthora capsici to drive the infection cycle on tomato. Molecular Plant-Microbe Interactions. 31:665-677.
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2018.
NMDA receptor-dependent regulation of miRNA expression and association with Argonaute during LTP in vivo. Frontiers in Cellular Neuroscience. 7
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2014.
Nitrogen fixation in legumes and actinorhizal plants in natural ecosystems: values obtained using N-15 natural abundance. Plant Ecology and Diversity. 4:131-140.
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2011.
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2013.
Niche-based responses in addressing the climatic constraints to farm production: analogues to adapting climate change in Nepal. Climate and Development. 5:174-181.
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2013.
Newly identified RNAs of raspberry leaf blotch virus encoding a related group of proteins. Journal of General Virology. 96:3432-3439.
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2015.
New training to meet the global phosphorus challenge. Environmental Science and Technology. 53:8479-8481.
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2019.
New records of the velvet ant and Mutilla europaea Linnaeues, 1758. British Journal of Entomology and Natural History. 29:229-230.
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2017.
New phenotyping methods for screening wheat and barley for beneficial responses to water deficit. Journal of Experimental Botany. 61:3499-3507.
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2010.
A new model for root growth in soil with macropores. Plant and Soil. 415:99-116.
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2017.
New model diagnostics for spatio-temporal systems in epidemiology and ecology. Journal of The Royal Society Interface. 11:ArticleNo.20131093..
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2014.
A new method to identify the fluvial regimes used by spawning salmonids. Canadian Journal of Fisheries and Aquatic Sciences. 66:1404-1408.
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2009.
A new method to identify the fluvial regimes used by spawning salmonids. Canadian Journal of Fisheries and Aquatic Sciences. 66:1404-1408.
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2009.
New knowledge networks of small-scale farmers in Europe’s periphery. Land Use Policy. 63:428-439.
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2017.
New insight into wild red raspberry populations using simple sequence repeat markers. Journal of the American Society for Horticultural Science. 134:109-119. Abstract
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2009.
New frontiers in belowground ecology for plant protection from root-feeding insects. Applied Soil Ecology. 108:96-107.
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2016.
A new approach to simulating stream isotope dynamics using Markov switching autoregressive models. Advances in Water Resources. 46:20-30.
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2012.
The neuroprotective potential of phenolic-enriched fractions from four juniperus species found in Portugal. Food Chemistry. 135:562-570.
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2012.
Neuroprotective effects of digested polyphenols from wild blackberry species. European Journal of Nutrition. 52:225-236.
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2013.
Neuroprotective effect of blackberry (Rubus sp.) polyphenols is potentiated after simulated gastronintestinal digestion. Food Chemistry. 131:1443-1452.
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2012.
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2016.
Networking of integrated pest management: a powerful approach to address common challenges in agriculture. Crop Protection. 89:139-151.
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2016.
Network motifs involving both competition and facilitation predict biodiversity in alpine plant communities. Proceedings of the National Academy of Sciences of the USA (PNAS). 118:ArticleNo.e2005759118.
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2021.
Network analyses reveal novel aspects of ALS pathogenesis. PLoS Genetics. 11:e1005107.
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2015.
Net ecosystem exchange from two formerly afforested peatlands undergoing restoration in the Flow Country of northern Scotland. Mires and Peat. 23:ArticleNumber05.
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2019.
Nesting preferences of the threatened wood ant Formica exsecta (Hymenoptera: Formicidae): implications for conservation in Scotland. Journal of Insect Conservation.. 14(3):269-276.
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2010.
A neoproterozoic transition in the marine nitrogen cycle. Current Biology. 24:652-657.
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2014.
Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds. Proceedings of the National Academy of Sciences of the United States of America. 117:2551-2559.
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2020.
Neither the public nor experts judge species primarily on their origins. Environmental Conservation. 42:349-355.
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2015.
The neglected season: warmer autumns counteract harsher winters and promote growth in Arctic reindeer. Global Change Biology. 27:993-1002.
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2020.
NCBI BLASTplus integrated into Galaxy. Technical note. GigaScience. 4
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2015.
Nature-based interventions for improving health and wellbeing: the purpose, the people and the outcomes. Sports. 7:ArticleNo.141.
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2019.
The nature, origin and significance of luminescent layers in the Bazhenov Shale formation of west Siberia, Russia. Marine and Petroleum Geology. 100:358-375.
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2019.
Natural variation in meiotic recombination rate shapes introgression patterns in intraspecific hybrids between wild and domesticated barley. New Phytologist, Published online..
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2020.
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2012.
Natural flood management: small-scale progress and larger-scale challenges. Scottish Geographical Journal. 135:23-32.
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2019.
A native parasitic plant systemically induces resistance in Jack Pine to a fungal symbiont of invasive mountain pine beetle. Journal of Chemical Ecology. 43:506-518.
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2017.
Nanoparticle interactions with zinc and iron: Implications for toxicology and inflammation. Toxicology and Applied Pharmacology. 225:80-89. Abstract
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2007.
The N-terminal domain of PMTV TGB1 movement protein is required for nucleolar localization, microtubule association and long-distance movement. Molecular Plant-Microbe Interactions. 23:1486-1497.
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2010.
Myocardial and systemic inflammation in acute stress-induced (Takotsubo) cardiomyopathy. Circulation. 129:1581-1592.
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2019.
Mutation of Arabidopsis spliceosomal timekeeper locus 1 causes circadian clock defects. The Plant Cell. 24:4066-4082.
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2012.
Mutagenesis and functional characterisation of the RNA and protein components of the toxIN abortive infection and toxin-antitoxin locus of Erwinia. Journal of Bacteriology. 191:6029-6039.
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2009.
Municipal wastewater as a microbial surveillance platform for enteric diseases: a case study for salmonella and salmonellosis. Environmental Science and Technology. 52:4869-4877.
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2018.
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2017.
Multivariate analysis of protein profiles of metal hyperaccumulator Thlaspi caerulescens accessions. Proteomics. 6:3696-3706. Abstract
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2006.
A multivariate analysis of beta diversity across organisms and environments. Ecology. 88(11):2830-2838.
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2007.
Multiscale socio-ecological networks in the age of information. PLoS ONE. 13:ArticleNo.e02056672.
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2018.
Multiplex-terminal restriction fragment length polymorphism (M-TRFLP). Nature Protocols. 1(5):2428-2433.
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2006.
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2012.
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2007.
Multiple profiling of soil microbial communities identifies potential genetic markers of metal-enriched sewage sludge. FEMS Microbiology Ecology. 65:555-564.
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2008.
Multiple mechanisms enable invasive species to suppress native species. Amercian Journal of Botany. 98:1086-1094.
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2011.
Multiple evolutionary origins of legume traits leading to extreme rhizobial differentiation. New Phytologist. 187:508-520.
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2010.
Multimodel ensembles improve predictions of crop-environment-management interactions. Global Change Biology. 24:5072-5083.
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2018.
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2012.
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2011.
Multi-locus sequence typing of Ixodes ricinus and its symbiont Candidatus Midichloria mitochondrii across Europe reveals evidence of local co-cladogenesis in Scotland. Ticks and Tick-borne Diseases.. 10:52-62.
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2019.
Multi-locus sequence types of Campylobacter carried by flies and slugs acquired from local ruminant faeces. Journal of Applied Microbiology. 109(3):829-838.
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2010.
Multi-level governance: opportunities and barriers in moving to a low-carbon Scotland. Earth and Environmental Science, Transactions of the Royal Society of Edinburgh. 103:175-186.
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2012.
Multi-factorial drivers of ammonia oxidizer communities: evidence from a national soil survey. Environmental Microbiology. 15:2545-2556.
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2013.
Multi-element signatures of stream sediments and sources under moderate to low flow conditions. Applied Geochemistry. 24(5):800-809.
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2009.
A multi-agent system model of pastoralist behaviour in Kazakhstan. Ecological Complexity. 3(1):23-36.
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2006.
Multi locus sequence analysis and symbiotic characterization of novel Ensifer strains nodulating Tephrosia spp. In the Indian Thar Desert. Systematic and Applied Microbiology. 39:534-545.
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2016.
mRNA levels of placental iron and zinc transporter genes are upregulated in Gambian women with low iron and zinc status. Journal of Nutrition. 147:1401-1409.
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2017.
Mp10 and Mp42 from the aphid species Myzus persicae trigger plant defenses in Nicotiana benthamiana through different activities. Molecular Plant Microbe Interactions. 27:30-39.
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2014.
Moving together: Incidental leaders and naive followers. Behavioural Processes. 83(3):225-241.
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2010.
Moving beyond heterogeneity and process complexity: A new vision for watershed hydrology. Water Resources Research. 43(7):W07301.
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2007.
Moving beyond calories and protein: Micronutrient assessment of UK diets and land use. Global Environmental Change - Human and Policy Dimensions. 52:108-116.
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2018.
Movement protein of hordeivirus interacts in vitro and in vivo with coilin, a major structural protein of Cajal bodies. Doklady Biochemistry and Biophysics. 442:57-60.
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2012.
Mountain forestry policy and strategies in response to climate change challenges: the case of the Ukrainian Carpathians. Journal of Economy and Ecology..
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2012.
Motives behind willingness to pay for improving biodiversity in a water ecosystem: economics, ethics and social psychology. Ecological Economics. 68(4):955-964.
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2009.
Morphological, genetic and molecular characteristics of barley root hair mutants. Journal of Applied Genetics. 55:433-447.
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2014.
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2006.
Morphological responses of wheat (Triticum aestivum L.) roots to phosphorus supply in two contrasting soils. Journal of Agricultural Science. 154:98-108.
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2016.
Morphological clasification of plant cell deaths. Cell Death and Differentiation. 18:1241-1246.
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2011.
The MORPH-R web server and software tool for predicting missing genes in biological pathways. Physiologia Plantarum. 155:12-20.
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2015.
More than just fish food: ecosystem services provided by freshwater insects. Ecological Entomology. 40:113-124.
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2015.
More frequent extreme climate events stabilize reindeer population dynamics. Nature Communications. 10:ArticleNo.1616.
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2019.
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2015.
A Monte Carlo filtering application for systematic sensitivity analysis of computable general equilibrium result. Economic Systems Research. 31:404-422.
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2019.
Monitoring the arsenic and iodine exposure of seaweed-eating North Ronaldsay sheep from the gestational and suckling periods to adulthood by using horns as a dietary archive. Environmental Science & Technology. 41:2673-2679. Abstract
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2007.
Monitoring changes in alternative precursor messenger RNA splicing in multiple gene transcripts. The Plant Journal. 53:1035-1048. Abstract
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2008.
Monitoring and screening plant populations with combined thermal and chlorophyll fluorescence imaging. Journal of Experimental Botany. 58:773-784. Abstract
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2007.
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2016.
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2016.
Molecular regulation of somatic embryogenesis in potato: an auxin led perspective. Plant Molecular Biology. 68:185-201. Abstract
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2008.
The molecular network governing nodule organogenesis and infection in the model legume Lotus japonicus. Nature Communications. 1:-10.
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2010.
A molecular method to assess Phytophthora diversity in environmental samples. Journal of Microbiological Methods. 88:356-368.
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2011.
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2015.
Molecular characterization of novel Bradyrhizobium strains nodulating ErioSema Chinese and Flemingia vestita, important unexplored native legumes of the sub-Himalayan region (Meghalaya) of India. Systematic and Applied Microbiology. 40:334-344.
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2017.
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2017.
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2017.
Molecular and biochemical examination of spraing disease in potato tuber in response to Tobacco rattle virus infection. Molecular Plant-Microbe Interactions (MPMI). 29:822-828.
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2016.
Molecular and biochemical characterization of an endo-. Biochemical Journal. 389:117-125. Abstract
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2005.
Molecular analysis of Phytophthora diversity in nursery-grown ornamental and fruit plants. Plant Pathology. 64:1308-1319.
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2015.
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2012.
Modulation of fructokinase activity of potato (Solanum tuberosum) results in substantial shifts in tuber metabolism. Plant and Cell Physiology. 46:1103-1115. Abstract
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2005.
Modulating effects of ontogeny on the outcome of plant-plant interactions along stress gradients. New Phytologist. 200:7-9.
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2013.
Modifying glycoalkaloid content in transgenic potato - Metabolome impacts. Food Chemistry. 187:437-443.
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2015.
Modelling under-reporting in epidemics. Journal of Mathematical Biology. 69:737-765.
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2014.
Modelling the persistence of volunteer oilseed rape (Brassica napus). Ecological Modelling. 198:195-207. Abstract
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2006.
Modelling the long-term response of stream water chemistry to forestry in Galloway, Southwest Scotland. Ecological Indicators. 37:396-411.
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2014.
Modelling the effects of previous infection and re-infection on the costs of bovine viral diarrhoea outbreaks in beef herds. Veterinary Journal. 185:138-143.
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2010.
Modelling the associations between fat-free mass, resting metabolic rate and energy intake in the context of total energy balance. International Journal of Obesity. 40:312-318.
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2016.
Modelling systemic change in coupled socio-environmental systems. Environmental Modelling and Software. 75:318-332.
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2016.
Modelling systemic change in coupled socio-environmental systems. Environmental Modelling and Software. 75:318-332.
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2016.
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2009.
Modelling species presence-absence in the ecological niche theory framework using shape-constrained generalized additive models. Ecological Modelling. 418:ArticleNo.108926.
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2020.
Modelling species abundance in a river by Negative Binomial hidden Markov models. Computational Statistics and Data Analysis. 71:599-614.
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2014.
Modelling soil organic carbon storage with RothC in irrigated Vertisols under cotton cropping systems in the sub-tropics. Soil and Tillage Research. 143:38-49.
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2014.
Modelling rotations: can crop sequences explain arable weed seedbank abundance? Weed Research. 51:422-432.
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2011.
Modelling nutritional interactions: from individuals to communities. Trends in Ecology and Evolution.. 25(1):53-60.
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2009.
Modelling nitrous oxide emissions from mown-grass and grain-cropping systems: Testing and sensitivity analysis of DailyDayCent using high frequency measurements. Science of the Total Environment. 572:955-977.
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2016.
Modelling long-term patterns of dissolved organic carbon concentration in the surface waters of a boreal catchment. Hydrology and Earth System Sciences. 12(2):437-447.
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2008.
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2019.
Modelling food security: Bridging the gap between the micro and the macro scale. Global Environmental Change. 63:ArticleNo.102085.
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2020.
Modelling doc export from catchments in Scotland using neural networks. Computers and Geosciences. 33:423-436.
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2007.
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2019.
Modelling contact spread of infection in host-parasitoid systems: Vertical transmission of pathogens can cause chaos. Journal of Theoretical Biology. 262:441-451.
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2010.
Modeling the ecological impact of phosphorus in catchments with multiple environmental stressors. Journal of Environmental Quality. 48:1336-1346.
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2019.
Modeling soil processes: Review, key challenges, and new perspectives. Vadose Zone Journal. 15
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2016.
Modeling primary and secondary fractionation effects and atmospheric transport of polychlorinated biphenyls through single-source emissions. Environmental Geochemistry and Health. 41:1939-1951.
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2019.
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2010.
A model of gross primary productivity based on satellite data suggests formerly afforested peatlands undergoing restoration regain full photosynthesis capacity after five to ten years. Journal of Environmental Management. 246:594-604.
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2019.
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2016.
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2018.
Mobilising the past: Towards a conceptualisation of retro-innovation. Sociologia Ruralis. 60:639-660.
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2020.