Publications list
Filters: First Letter Of Last Name is S [Clear All Filters]
Identification and characterization of parasitism genes from the pinewood nematode Bursaphelenchus xylophilus reveals a multilayered detoxification strategy. Molecular Plant Pathology. 17:286-295.
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2016.
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2016.
Impact of light-exposure on the metabolite balance of transgenic potato tubers with modified glycoalkaloid biosynthesis. Food Chemistry. 200:263-273.
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2016.
The INDETERMINATE DOMAIN protein BROAD LEAF1 limits barley leaf width by restricting lateral proliferation. Current Biology. 26:903-909.
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2016.
The influence of weather conditions during gestation on life histories in a wild Arctic ungulate. Proceedings of the Royal Society, B. Published online..
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2016.
The influence of weather conditions during gestation on life histories in a wild Arctic ungulate. Proceedings of the Royal Society, B.. 283:ArticleNo.20161760.
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2016.
Integrated proteomics and metabolomics to unlock global and clonal responses of Eucalyptus globulus recovery from water deficit. Metabolomics. 12:ArticleNo.141.
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2016.
Integrating climate change mitigation into river basin management planning for the Water Framework Directive - A Danish case. Environmental Science and Policy. 55:141-150.
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2016.
Integrating sediment biogeochemistry into 3D oceanic models: A study of benthic-pelagic coupling in the Black Sea. Ocean Modelling. 101:83-100.
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2016.
Integrating sediment biogeochemistry into 3D oceanic models: a study of benthic-pelagic coupling in the Black Sea. Ocean Modelling. 101:83-100.
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2016.
Investigation of salicylate hepatic responses in comparison with chemical analogues of the drug. Biochimica et Biophysica Acta - Molecular Basis of Disease. 1862:1412-1422.
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2016.
Lack of functional redundancy in the relationship between microbial diversity and ecosystem functioning. Journal of Ecology. 104:936-946.
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2016.
Legumes are different: Leaf nitrogen, photosynthesis, and water use efficiency. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 113:4098-4103.
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2016.
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2016.
Long-term macronutrient stoichiometry of UK ombrotrophic peatlands. Science of the Total Environment. 572:1561-1572.
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2016.
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2016.
The Maltase involved in starch metabolism in barley endosperm is encoded by a single gene. PLoS One. 11:e0151642.
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2016.
Mapping earthworm communities in Europe. Applied Soil Ecology. 97:98-111.
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2016.
Markov switching autoregressive models for interpreting vertical movement data with application to an endangered marine apex predator. Methods in Ecology and Evolution. 7:407-417.
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2016.
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2016.
Mechanisms of early microbial establishment on growing root surfaces. Vadose Zone Journal. 15
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2016.
Metabarcoding analysis of phytophthora diversity using genus-specific primers and 454 pyrosequencing. Phytopathology. 106:305-313.
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2016.
A method-centric 'User Manual' for the mitigation of diffuse water pollution from agriculture. Soil Use and Management. 32:162-171.
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2016.
Microbial diversity drives multifunctionality in terrestrial ecosystems. Nature Communications. 7
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2016.
The mineralisation of dissolved organic matter recovered from temperate waterbodies during summer. Aquatic Sciences. 78:447-482.
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2016.
Mineralogy and biogeochemistry of potassium in the Skogaby experimental forest, southwest Sweden: pools, fluxes and K/Rb ratios in soil and biomass. Biogeochemistry. Published online..
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2016.
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2016.
Modeling soil processes: Review, key challenges, and new perspectives. Vadose Zone Journal. 15
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2016.
Modelling nitrous oxide emissions from mown-grass and grain-cropping systems: Testing and sensitivity analysis of DailyDayCent using high frequency measurements. Science of the Total Environment. 572:955-977.
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2016.
Modelling systemic change in coupled socio-environmental systems. Environmental Modelling and Software. 75:318-332.
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2016.
Modelling systemic change in coupled socio-environmental systems. Environmental Modelling and Software. 75:318-332.
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2016.
Modelling the associations between fat-free mass, resting metabolic rate and energy intake in the context of total energy balance. International Journal of Obesity. 40:312-318.
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2016.
Molecular and biochemical examination of spraing disease in potato tuber in response to Tobacco rattle virus infection. Molecular Plant-Microbe Interactions (MPMI). 29:822-828.
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2016.
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2016.
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2016.
Morphological responses of wheat (Triticum aestivum L.) roots to phosphorus supply in two contrasting soils. Journal of Agricultural Science. 154:98-108.
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2016.
Multi locus sequence analysis and symbiotic characterization of novel Ensifer strains nodulating Tephrosia spp. In the Indian Thar Desert. Systematic and Applied Microbiology. 39:534-545.
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2016.
Networking of integrated pest management: a powerful approach to address common challenges in agriculture. Crop Protection. 89:139-151.
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2016.
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2016.
New frontiers in belowground ecology for plant protection from root-feeding insects. Applied Soil Ecology. 108:96-107.
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2016.
No evidence for extensive horizontal gene transfer in the genome of the tardigrade Hypsibius dujardini. Proceedings of the National Academy of Sciences of the United States of America. 1135053
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2016.
Novel Cupriavidus strains isolated from root nodules of native Uruguayan Mimosa species. Applied and Environmental Microbiology. 82:3150-3164.
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2016.
Nutritional and phytochemical content of high-protein crops. Journal of Agricultural and Food Chemistry. 64:7800-7811.
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2016.
Organic matter chemistry controls greenhouse gas emissions from permafrost peatlands. Soil Biology and Biochemistry. 98:42-53.
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2016.
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2016.
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2016.
Patterns of attention to renewable energy in the British farming press from 1980 to 2013. Renewable and Sustainable Energy Reviews. 54:959-973.
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2016.
The plant cell wall: a complex and dynamic structure as revealed by the responses of genes under stress conditions. Frontiers in Plant Science. 7
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2016.
Plausible self-reported dietary intakes in a residential facility are not necessarily reliable. European Journal of Clinical Nutrition. 70:130-135.
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2016.
Preface to the thematic issue on modelling systemic change in coupled socio-environmental systems. Environmental Modelling and Software. 75:317.
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2016.
Protection of ewes against Teladorsagia circumcincta infection in the periparturient period by vaccination with recombinant antigens. Veterinary Parasitology. 228:130-136.
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2016.
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2016.
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2016.
Regional trends in Scottish advisory soil acidity and phosphorus results: significance of management history, land use and soil attributes. Soil Use and Management. 32:44-53.
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2016.
The relationship between water extractable P and modified Morgan P: results based on data and chemical modelling. Soil Use and Management. 32:162-171.
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2016.
The relationship between water-soluble P and modified Morgan P: results based on data and chemical modelling. Soil Use and Management. 32:162-171.
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2016.
Reply to comment on: Vegetation burning for game management in the UK uplands is increasing and overlaps spatially with soil carbon and protected areas. Biological Conservation. 195:295-296.
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2016.
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2016.
Review: A mechanistic framework to improve understanding and applications of push-pull systems in pest management. Journal of Applied Ecology. 53:202-212.
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2016.
Rhizobium altiplani sp. nov. isolated from effective nodules on Mimosa pudica growing in untypically alkaline soil in Central Brazil. International Journal of Systematic and Evolutionary Microbiology. 66:1-7.
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2016.
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2016.
The role of trust in the resolution of conservation conflicts. Biological Conservation. 195:196-202.
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2016.
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2016.
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Septic tank discharges as multi-pollutant hotspots in catchments. Science of the Total Environment. 542:854-863.
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2016.
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2016.
Soil and tree biomass carbon sequestration potential of silvopastoral and woodland pasture systems in North East Scotland. Agroforestry Systems. 90:371-383.
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2016.
Soil characterisation by bacterial community analysis for forensic applications: a quantitative comparison of environmental technologies. Forensic Science International. 26:21-29.
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2016.
Spatial analysis of blackleg-affected seed potato crops in Scotland. Plant Pathology. 65:570-576.
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2016.
Spatial Bayesian belief networks as a planning decision tool for mapping ecosystem services trade-offs on multifunctional forested landscapes. Environmental Research. 144:15-26.
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2016.
A spatially distributed risk screening tool to assess climate and land use change impacts on water-related ecosystem services. Environmental Modelling and Software. 83:12-26.
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2016.
Stability of small ubiquitin-like modifier (SUMO) proteases OVERLY TOLERANT TO SALT1 and-2 modulates salicylic acid signalling and SUMO1/2 conjugation in Arabidopsis thaliana. Journal of Experimental Botany. 67:353-363.
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2016.
Stitching organelles: organization and function of specialized membrane contact sites in plants. Trends in Cell Biology. 26:705-717.
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2016.
Synergies and trade-offs between ecosystem services in an alpine ecosystem grazed by sheep - an experimental approach. Basic and Applied Ecology. 17:596-608.
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2016.
Temporal variability in domestic point source discharges and their associated impact on receiving waters. Science of the Total Environment. 571:1275-1283.
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2016.
Terrestrial nitrogen cycling in earth system models revisited. New Phytologist. 210:1165-1168.
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2016.
Testing the systemic induced resistance hypothesis with Austrian pine and Diplodia sapinea. Physiological and Molecular Plant Pathology. 94:118-125.
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2016.
The topological viewshed; embedding topological pointers into digital terrain models to improve GIS capability for visual landscape analysis. International Journal of Digital Earth. 9
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2016.
The topological viewshed; embedding topological pointers into digital terrain models to improve GIS capability for visual landscape analysis. International Journal of Digital Earth. 9:1185-1205.
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2016.
Tree species' influences on soil carbon dynamics revealed with natural abundance C-13 techniques. Plant and Soil. 400:285-296.
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2016.
Unpacking the people - biodiversity paradox: a conceptual framework. Bioscience. 66:576-583.
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2016.
Using historical climate observations to understand future climate change crop yield impacts in the Southeastern US. Climatic Change. 134:311-326.
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2016.
Using nematode communities to test a European scale soil biological monitoring programme for policy development. Applied Soil Ecology. 97:78-85.
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2016.
Variable rate nitrogen fertilizer response in wheat using remote sensing. Precision Agriculture. 17:168-182.
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2016.
Variations in the fate and biological effects of sulfamethoxazole, norfloxacin and doxycycline in different vegetable-soil systems following manure application. Journal of Hazardous Materials, 304, 49-57..
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2016.
(Poly)phenols protect from alpha-synuclein toxicity by reducing oxidative stress and promoting autophagy. Human Molecular Genetics. 24:1717-1732.
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2015.
Acclimation, adaptation, traits and trade-offs in plankton functional type models: reconciling terminology for biology and modelling. Journal of Plankton Research. 37:683-691.
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2015.
Adding ‘iterativity’ to the credibility, relevance, legitimacy: A novel scheme to highlight dynamic aspects of science-policy interfaces. Environmental Science and Policy. 54:505-512.
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2015.
An agent-based model for simulating environmental behavior in an educational organization. Neural Processing Letters. 42:89-118.
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2015.
Alternative splicing of mini-exons in the Arabidopsis leaf rust receptor-like kinase LRK10 genes affects subcellular localisation. Plant Cell Reports. 34:495-505.
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2015.
Ancient and novel small RNA pathways compensate for the loss of piRNAs in multiple independent nematode lineages. PLoS Biology. 13:e1002061.
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2015.
Application of long-chain alcohols as diet-composition markers in sheep fed on grass-white clover and heather-gorse plant species. Grass and Forage Science. 70:30-43.
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2015.
The Arabidopsis epitranscriptome. Current Opinion in Plant Biology. 27:17-21.
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2015.
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2015.
Automated estimation of leaf area development in sweet pepper plants from image analysis. Functional Plant Biology. 42:486-492.
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2015.
Barley: a translational model for adaptation to climate change. New Phytologist. 206:913-931.
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2015.
Benefits from and threats to European treeline ecosystem services: an exploratory study of stakeholders and governance. Regional Environmental Change. Published online.
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2015.
Breast cancer risk and imprinting methylation in blood. Clinical Epigenetics. 7:ArticleNo.92.
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2015.
Burkholderia dipogonis sp. Nov., isolated from root nodules of Dipogon lignosus in New Zealand and Western Australia. International Journal of Systematic and Evolutionary Microbiology. 65:4716-4723.
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2015.
Buying access to social capital? From collaboration to service provision in an agricultural co-operative Sociologia Ruralis. Published online.
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2015.
Can scenario-planning support community based natural resource management? Experiences from three countries in Latin America Ecology and Society. 20:ArticleNo.28.
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2015.
The cascading impacts of livestock grazing in upland ecosystems: a 10 year experiment. Ecosphere. 6:ArticleNo.42..
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2015.
Catalysing transdisciplinary synthesis in ecosystem science and management. Science of the Total Environment. 534:1-3.
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2015.
Challenges and opportunities for quantifying roots and rhizosphere interactions through imaging and image analysis. Plant, Cell and Environment. 38:1213-1232.
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2015.
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A cloud based tool for knowledge exchange on local scale flood risk. Journal of Environmental Management. 161:38-50.
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2015.
Combination of herbivore removal and nitrogen deposition increases upland carbon storage. Global Change Biology.. 21:3036-3048.
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2015.
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The complexities of agent-based modeling output analysis. Journal of Artificial Societies and Social Simulation. 18:ArticleNo.4.
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2015.
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Conceptualising multi-regime interactions: the role of the agriculture sector in renewable energy transitions. Research Policy. 44:1543-1554.
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2015.
Continuous and discontinuous variation in ecosystem carbon stocks with elevation across a treeline ecotone. Biogeosciences. 12:1615-1627.
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2015.
The contribution of household chemicals to environmental discharges via effluents: Combining chemical and behavioural data. Journal of Environmental Management. 150:427-434.
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2015.
Could the creative class be a factor in Scottish rural development? Scottish Affairs. 24:207-226.
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2015.
Crop modelling for integrated assessment of risk to food production from climate change. Environmental Modelling and Software. 72:287-303.
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2015.
A cross-taxon analysis of the impact of climate change on abundance trends in central Europe. Biological Conservation. 187:41-50.
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2015.
Deconstructing the 'young farmer problem in Europe': towards a research agenda. Journal of Rural Studies. 38:39-51.
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2015.
Deterministic processes vary during community assembly for ecologically dissimilar taxa. Nature Communications. 6
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2015.
The deubiquitinating enzyme AMSH1 is required for rhizobial infection and nodule organogenesis in Lotus japonicus. The Plant Journal. 83:719-731.
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2015.
Digital catchment observatories: a platform for engagement and knowledge exchange between catchment scientists, policy makers, and local communities. Water Resources Research. 51:4815-4822.
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2015.
Distinct circular single-stranded DNA viruses exist in different soil types. Applied and Environmental Microbiology. 81:3934-3945.
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2015.
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2015.
The dynamics of co-management and social capital in protected area management - The Cardoso Island State Park in Brazil. World Development. 67:475-489.
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2015.
Editorial on plants as alternative hosts for human and animal pathogens. Frontiers in Microbiology. 6
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2015.
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Eight principles of integrated pest management. Agronomy for Sustainable Development. 35:1199-1215.
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2015.
Equine grass sickness in Scotland: a case control study of environmental geochemical risk factors. Equine Veterinary Journal. Published online..
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2015.
The Euler character: a new type of visual landscape metric? Environment and Planning B. 42:110-132.
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2015.
Evolution of the seed dispersal system in barley. Cell. 162:527-539.
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2015.
Evolutionary dynamics of the cellulose synthase gene superfamily in grasses. Plant Physiology. 168:968-983.
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2015.
Five reasons to consider Phytophthora infestans a reemerging pathogen. Phytopathology. 105:966-981.
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2015.
Function of glutathione peroxidases in legume root nodules. Journal of Experimental Botany. 66:2979-2990.
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2015.
Future environmental and geographic risks of Fusarium head blight of wheat in Scotland. European Journal of Plant Pathology. 142:133-147.
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2015.
Gas transfer controls carbon limitation during biomass production by marine microalgae. Chemsuschem. 8:2727-2736.
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2015.
A genetically modified tobacco mosaic virus that can produce gold nanoparticles from a metal salt precursor. Frontiers in Plant Science. 6
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2015.
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2015.
Geographies of citizenship and everyday (im)mobility. Geoforum. 64:325-332.
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2015.
Global Research Alliance Modelling Platform (GRAMP): An open web platform for modelling greenhouse gas emissions from agro-ecosystems. Computers and Electronics in Agriculture. 111:112-120.
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2015.
How well can we model stream phosphorus concentrations in agricultural catchments? Environmental Modelling and Software. 64:31-46.
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2015.
Identification of a fluorometabolite from Streptomyces sp MA37: (2R3S4S)-5-fluoro-2,3,4-trihydroxypentanoic acid. Chemical Science. 6:1414-1419.
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2015.
Impacts of soil and water pollution on food safety and health risks in China. Environment International. 77:5-15.
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2015.
Impacts on the metabolome of down-regulating polyphenol oxidase in potato tubers. Transgenic Research. 24:447-461.
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2015.
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Improving intercropping: a synthesis of research in agronomy, plant physiology and ecology. New Phytologist. 206:107-117.
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2015.
Improving value transfer through socio-economic adjustments in a multicountry choice experiment of water conservation alternatives. Australian Journal of Agricultural and Resource Economics. 59:458-478.
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Intraspecific genetic diversity and composition modify species-level diversity-productivity relationships. New Phytologist. 205:720-730.
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Invertebrate species at risk from ash dieback in the UK. Journal of Insect Conservation. 19:75-85.
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Is there a case for community-based equity participation in Scottish on-shore wind energy production? Gaps in evidence and research needs Renewable and Sustainable Energy Reviews. 41:540-549.
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2015.
Is there an impact of climate change on soil carbon contents in England and Wales? European Journal of Soil Science. 66:451-462.
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2015.
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Lichen response to ammonia deposition defines the footprint of a penguin rookery. Biogeochemistry. 122:295-311.
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2015.
Lost in translation: pitfalls in deciphering plant alternative splicing transcripts. The Plant Cell. 27:2083-2087.
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2015.
Mapping earthworm communities in Europe. Applied Soil Ecology. 97:98-111.
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2015.
Mind the gap-deficits in our knowledge of aspects impacting the bioavailability of phytochemicals and their metabolites - a position paper focusing on carotenoids and polyphenols. Molecular Nutrition and Food Research. 59:1307-1323.
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2015.
Modifying glycoalkaloid content in transgenic potato - Metabolome impacts. Food Chemistry. 187:437-443.
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2015.
Molecular analysis of Phytophthora diversity in nursery-grown ornamental and fruit plants. Plant Pathology. 64:1308-1319.
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More than just fish food: ecosystem services provided by freshwater insects. Ecological Entomology. 40:113-124.
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2015.
The MORPH-R web server and software tool for predicting missing genes in biological pathways. Physiologia Plantarum. 155:12-20.
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2015.
NCBI BLASTplus integrated into Galaxy. Technical note. GigaScience. 4
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2015.
Neither the public nor experts judge species primarily on their origins. Environmental Conservation. 42:349-355.
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2015.
Network analyses reveal novel aspects of ALS pathogenesis. PLoS Genetics. 11:e1005107.
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2015.
Newly identified RNAs of raspberry leaf blotch virus encoding a related group of proteins. Journal of General Virology. 96:3432-3439.
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2015.
Operationalizing an ecosystem services-based approach using Bayesian Belief Networks: An application to a riparian buffer zone. Ecological Economics. 110:15-27.
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2015.
Optimization of in vitro inhibition of HT-29 colon cancer cell cultures by Solanum tuberosum L. extracts. Food and Function. 6:72-83.
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2015.
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2015.
Pantoea ananatis utilizes a type VI secretion system for pathogenesis and bacterial competition. Molecular Plant-Microbe Interactions. 28:420-431.
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2015.
Phenolic compounds in blackcurrant (Ribes nigrum L.) leaves relative to leaf position and harvest date. Food Chemistry. 172:135-142.
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2015.
Phylogenetic effects on shoot magnesium concentration. Crop and Pasture Science. 66:1241-1248.
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2015.
The plant microbiome at work. Molecular Plant Microbe Interactions. 28:212-217.
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2015.
Potential of Fava Bean as future protein supply to partially replace meat intake in the human diet. Comprehensive Reviews in Food Science and Safety. 14:511-522.
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2015.
A pragmatic methodology for horizon scanning of water quality linked to future climate and land use scenarios. Land Use Policy. 44:131-144.
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2015.
Predicting a change in the order of spring phenology in temperate forests. Global Change Biology. 21:2603-2611.
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2015.
Predicting Scottish topsoil organic matter content from colour and environmental factors. European Journal of Soil Science. 66:112-120.
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2015.
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2015.
Probing soil physical and biological resilience data from a broad sampling of arable farms in Scotland. Soil Use and Management. 31:491-503.
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2015.
Prospects for payments for ecosystem services in the Brazilian Pantanal: a scenario analysis. The Journal of Environment and Development. 24:26-53.
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2015.
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2015.
Raspberry fruit quality changes during ripening and storage as assessed by colour, sensory evaluation and chemical analyses. Scientia Horticulturae. 195:216-225.
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2015.
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2015.
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2015.
Review: A mechanistic framework to improve understanding and applications of push-pull systems in pest management. Journal of Applied Ecology. 53:202-212.
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2015.
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2015.
Rural gentrification in Russia: Renegotiating identity, alternative food production and social tensions in the countryside. Journal of Rural Studies. 42:154-165.
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2015.
Sampling root-respired CO2 in-situ for C-13 measurement. Plant and Soil, 393, 259-271..
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2015.
Scenario planning: The future of the cattle and sheep industries in Scotland and their resiliency to disease. Preventive Veterinary Medicine. 121:353-364.
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2015.
School closures as a driver of rural decline in Scotland: a problem in pursuit of some evidence? Scottish Geographical Journal. 131:78-97.
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2015.
Scotland's hydropower: Current capacity, future potential and the possible impacts of climate change. Renewable and Sustainable Energy Reviews. 52:111-122.
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2015.
Seed dispersal by ungulates as an ecological filter: a trait-based meta-analysis. Oikos. 124:1109-1120.
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2015.
Shifts in the microbial community structure explain the response of soil respiration to land-use but not to climate warming. Soil Biology and Biochemistry. 89:123-134.
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2015.