Skip to navigation Skip to content

Publications list

Found 2467 results

Filters: First Letter Of Last Name is S  [Clear All Filters]
2016
Espada M, Silva AC, van Den Akker SE, Cock PJA, Mota M, Jones JT.  2016.  Identification and characterization of parasitism genes from the pinewood nematode Bursaphelenchus xylophilus reveals a multilayered detoxification strategy. Molecular Plant Pathology. 17:286-295.
Roberto BS, Macedo GA, Macedo JA, Martins IM, Nakajima VM, Allwood JW, Stewart D, McDougall GJ.  2016.  Immobilized tannase treatment alters polyphenolic composition in teas and their potential anti-obesity and hypoglycemic activities in vitro. Food and Function. 7:3920-3932.
Shepherd LVT, Hackett CA, Alexander CJ, McNicol JW, Sungurtas JA, McRae D, McCue KF, Belknap WR, Davies HV.  2016.  Impact of light-exposure on the metabolite balance of transgenic potato tubers with modified glycoalkaloid biosynthesis. Food Chemistry. 200:263-273.
Jost M, Hensel G, Kappel C, Druka A, Sicard A, Hohmann U, Beier S, Himmelbach A, Waugh R, Kumlehn J et al..  2016.  The INDETERMINATE DOMAIN protein BROAD LEAF1 limits barley leaf width by restricting lateral proliferation. Current Biology. 26:903-909.
Douhard M, Loe LE, Stien A, Bonenfant C, Irvine RJ, Veiberg V, Ropstad E, Albon SD.  2016.  The influence of weather conditions during gestation on life histories in a wild Arctic ungulate. Proceedings of the Royal Society, B. Published online..
Douhard M, Loe LE, Stien A, Bonenfant C, Irvine RJ, Veiberg V, Ropstad E, Albon SD.  2016.  The influence of weather conditions during gestation on life histories in a wild Arctic ungulate. Proceedings of the Royal Society, B.. 283:ArticleNo.20161760.
Correia B, Valledor L, Hancock RD, Renaut J, Pascual J, Soares AMVM, Pinto G.  2016.  Integrated proteomics and metabolomics to unlock global and clonal responses of Eucalyptus globulus recovery from water deficit. Metabolomics. 12:ArticleNo.141.
Kaspersen BS, Jacobsen TV, Butts MB, Boegh E, Muller HG, Stutter MI, Fredenslund AM, Kjaer T.  2016.  Integrating climate change mitigation into river basin management planning for the Water Framework Directive - A Danish case. Environmental Science and Policy. 55:141-150.
Capet A, Meysman FJR, Akoumianaki I, Soetaert K, Gregoire M.  2016.  Integrating sediment biogeochemistry into 3D oceanic models: A study of benthic-pelagic coupling in the Black Sea. Ocean Modelling. 101:83-100.
Capet A, Meysman FJR, Akoumianaki I, Soetaert K, Gregoire M.  2016.  Integrating sediment biogeochemistry into 3D oceanic models: a study of benthic-pelagic coupling in the Black Sea. Ocean Modelling. 101:83-100.
Cameron AR, Logie L, Patel K, Bacon S, Forteath C, Harthill J, Roberts A, Sutherland CD, Stewart D, Viollet B et al..  2016.  Investigation of salicylate hepatic responses in comparison with chemical analogues of the drug. Biochimica et Biophysica Acta - Molecular Basis of Disease. 1862:1412-1422.
Delgado-Baquerizo M, Giaramida L, Reich PB, Khachane AN, Hamonts K, Edwards C, Lawton LA, Singh BK.  2016.  Lack of functional redundancy in the relationship between microbial diversity and ecosystem functioning. Journal of Ecology. 104:936-946.
Adams MA, Turnbull TL, Sprent JI, Buchmann N.  2016.  Legumes are different: Leaf nitrogen, photosynthesis, and water use efficiency. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 113:4098-4103.
Schillereff DN, Boyle JF, Toberman H, Adams JL, Bryant CL, Chiverrell R, Helliwell RC, Keenan P, Lilly A, Tipping E.  2016.  Long-term macronutrient stoichiometry of UK ombrotrophic peatlands. Science of the Total Environment. 572:1561-1572.
Gibson SA, Horgan GW, Francis LE, Gibson AA, Stephen AM.  2016.  Low calorie beverage consumption is associated with energy and nutrient intakes and diet quality in British adults. Nutrients. 8:ArticleNo.9.
Andriotis VME, Saalbach G, Waugh R, Field RA, Smith AM.  2016.  The Maltase involved in starch metabolism in barley endosperm is encoded by a single gene. PLoS One. 11:e0151642.
Rutgers M, Orgiazzi A, Gardi C, Rombke J, Jansch S, Keith AM, Neilson R, Boag B, Schmidt O, Murchie AK et al..  2016.  Mapping earthworm communities in Europe. Applied Soil Ecology. 97:98-111.
Dupuy LX, Silk WK.  2016.  Mechanisms of early microbial establishment on growing root surfaces. Vadose Zone Journal. 15
Prigigallo MI, Abdelfattah A, Cacciola SO, Faedda R, Sanzani SM, Cooke DEL, Schena L.  2016.  Metabarcoding analysis of phytophthora diversity using genus-specific primers and 454 pyrosequencing. Phytopathology. 106:305-313.
Cuttle SP, Newell-Price JP, Harris D, Chadwick DR, Shepherd MA, Anthony SGA, Macleod CJA, Haygarth PM, Chambers BJ.  2016.  A method-centric 'User Manual' for the mitigation of diffuse water pollution from agriculture. Soil Use and Management. 32:162-171.
Delgado-Baquerizo M, Maestre FT, Reich PB, Jeffries TC, Gaitán JJ, Encinar D, Berdugo M, Campbell CD, Singh BK.  2016.  Microbial diversity drives multifunctionality in terrestrial ecosystems. Nature Communications. 7
Stutter MI, Cairns J.  2016.  The mineralisation of dissolved organic matter recovered from temperate waterbodies during summer. Aquatic Sciences. 78:447-482.
Simonsson M, Court M, Bergholm J, Lemarchand D, Hillier S.  2016.  Mineralogy and biogeochemistry of potassium in the Skogaby experimental forest, southwest Sweden: pools, fluxes and K/Rb ratios in soil and biomass. Biogeochemistry. Published online..
Vereecken H, Schnepf A, Hopmans JW, Javaux M, Or D, Roose DOT, Vanderborght J, Young MH, Amelung W, Aitkenhead M et al..  2016.  Modeling soil processes: Review, key challenges, and new perspectives. Vadose Zone Journal. 15
Senapati N, Chabbi A, Giostri AF, Yeluripati JB, Smith P.  2016.  Modelling nitrous oxide emissions from mown-grass and grain-cropping systems: Testing and sensitivity analysis of DailyDayCent using high frequency measurements. Science of the Total Environment. 572:955-977.
Polhill JG, Filatova T, Schlüter M, Voinov A.  2016.  Modelling systemic change in coupled socio-environmental systems. Environmental Modelling and Software. 75:318-332.
Polhill JG, Filatova T, Schluter M, Voinov A.  2016.  Modelling systemic change in coupled socio-environmental systems. Environmental Modelling and Software. 75:318-332.
Hopkins M, Finlayson G, Duarte C, Whybrow S, Ritz P, Horgan GW, Blundell JE, Stubbs RJ.  2016.  Modelling the associations between fat-free mass, resting metabolic rate and energy intake in the context of total energy balance. International Journal of Obesity. 40:312-318.
Sahi G, Hedley PP, Morris J, Loake GJ, MacFarlane SA.  2016.  Molecular and biochemical examination of spraing disease in potato tuber in response to Tobacco rattle virus infection. Molecular Plant-Microbe Interactions (MPMI). 29:822-828.
Oliver DM, Hanley ND, van Niekerk M, Kay D, Heathwaite AL, Rabinovici SJM, Kinzelman JL, Fleming LE, Porter J, Shaikh S et al..  2016.  Molecular tools for bathing water assessment in Europe: Balancing social science research with a rapidly developing environmental science evidence-base. Ambio. 45:52-62.
Oliver DM, Hanley ND, van Niekerk M, Kay D, Heathwaite AL, Rabinovici SJM, Kinzelman JL, Fleming LE, Porter J, Shaikh S et al..  2016.  Molecular tools for bathing water assessment in Europe: balancing social science research with a rapidly developing environmental science evidence-base. Ambio. 45:52-62.
Yuan HM, Blackwell M, McGrath S, George TS, Granger SH, Hawkins JMB, Dunham S, Shen JB.  2016.  Morphological responses of wheat (Triticum aestivum L.) roots to phosphorus supply in two contrasting soils. Journal of Agricultural Science. 154:98-108.
Tak N, Awasthi E, Bissa G, Meghwal RR, James EK, Sprent JS, Gehlot HS.  2016.  Multi locus sequence analysis and symbiotic characterization of novel Ensifer strains nodulating Tephrosia spp. In the Indian Thar Desert. Systematic and Applied Microbiology. 39:534-545.
Lamichhane JR, Aubertot JN, Begg G, Birch ANE, Boonekamp P, Dachbrodt-Saaydeh S, Hansen JG, Hovmoller MS, Jensen JE, Jorgensen KLNJ et al..  2016.  Networking of integrated pest management: a powerful approach to address common challenges in agriculture. Crop Protection. 89:139-151.
Helfer G, Ross AW, Thomson LM, Mayer CD, Stoney PN, McCaffery PJ, Morgan PJ.  2016.  A neuroendocrine role for chemerin in hypothalamic remodelling and photoperiodic control of energy balance. Scientific Reports. 6
Johnson SN, Benefer CM, Frew A, Griffiths BS, Hartley SE, Karley AJ, Rasmann S, Schumann M, Sonnemann I, Robert CAM.  2016.  New frontiers in belowground ecology for plant protection from root-feeding insects. Applied Soil Ecology. 108:96-107.
Koutsovoulos G, Kumar S, Laetsch DR, Stevens L, Daub J, Conlon C, Maroon H, Thomas F, Aboobaker AA, Blaxter M.  2016.  No evidence for extensive horizontal gene transfer in the genome of the tardigrade Hypsibius dujardini. Proceedings of the National Academy of Sciences of the United States of America. 1135053
Platero R, James EK, Rios C, Iriarte A, Sandes L, Zabaleta M, Battistoni F, Fabiano E.  2016.  Novel Cupriavidus strains isolated from root nodules of native Uruguayan Mimosa species. Applied and Environmental Microbiology. 82:3150-3164.
Multari S, Neacsu M, Scobbie L, Cantlay L, Duncan G, Vaughan N, Stewart D, Russell WR.  2016.  Nutritional and phytochemical content of high-protein crops. Journal of Agricultural and Food Chemistry. 64:7800-7811.
Sjogersten S, Caul S, Daniell TJ, Jurd APS, O'Sullivan OS, Stapleton CS, Titman JJ.  2016.  Organic matter chemistry controls greenhouse gas emissions from permafrost peatlands. Soil Biology and Biochemistry. 98:42-53.
Schimmelrnann A, Qi HP, Coplen TB, Brand WA, Fong J, Meier-Augenstein W, Kemp HF, Toman B, Ackermann A, Assonov S et al..  2016.  Organic reference materials for hydrogen, carbon, and nitrogen stable isotope-ratio measurements: caffeines, n-alkanes, fatty acid methyl esters, glycines, L-valines, polyethylenes, and oils. Analytical Chemistry. 88:4294-4302.
Ehlers MH, Sutherland LA.  2016.  Patterns of attention to renewable energy in the British farming press from 1980 to 2013. Renewable and Sustainable Energy Reviews. 54:959-973.
Houston K, Tucker MR, Chowdhury J, Shirley N, Little A.  2016.  The plant cell wall: a complex and dynamic structure as revealed by the responses of genes under stress conditions. Frontiers in Plant Science. 7
Whybrow S, Stubbs RJ, Johnstone AM, O'Reilly LM, Fuller Z, Livingstone MBE, Horgan GW.  2016.  Plausible self-reported dietary intakes in a residential facility are not necessarily reliable. European Journal of Clinical Nutrition. 70:130-135.
Polhill JG, Filatova T, Schlüter M, Voinov A.  2016.  Preface to the thematic issue on modelling systemic change in coupled socio-environmental systems. Environmental Modelling and Software. 75:317.
Nisbet AJ, McNeilly TN, Greer AW, Bartley Y, Oliver EM, Smith S, Palarea-Albaladejo J, Matthews JB.  2016.  Protection of ewes against Teladorsagia circumcincta infection in the periparturient period by vaccination with recombinant antigens. Veterinary Parasitology. 228:130-136.
Zhang Y, Thomas CL, Xiang JX, Long Y, Wang XH, Zou J, Luo ZL, Ding GD, Cai HM, Graham NS et al..  2016.  QTL meta-analysis of root traits in Brassica napus under contrasting phosphorus supply in two growth systems. Scientific Reports. 6
Archer NAL, Otten W, Schmidt S, Bengough AG, Shah N, Bonell M.  2016.  Rainfall infiltration and soil hydrological characteristics below ancient forest, planted forest and grassland in a temperate climate. Ecohydrology. 9:585-600.
Edwards AC, Sinclair AH, Coull MC, Crooks W, Rees RM, Lumsdon DG.  2016.  Regional trends in Scottish advisory soil acidity and phosphorus results: significance of management history, land use and soil attributes. Soil Use and Management. 32:44-53.
Lumsdon DG, Shand CA, Wendler R, Edwards AC, Stutter MI, Richards S, Sinclair AH.  2016.  The relationship between water extractable P and modified Morgan P: results based on data and chemical modelling. Soil Use and Management. 32:162-171.
Lumsdon DG, Shand CA, Wendler R, Edwards AC, Stutter MI, Richards S, Sinclair AH.  2016.  The relationship between water-soluble P and modified Morgan P: results based on data and chemical modelling. Soil Use and Management. 32:162-171.
Douglas DJT, Buchanan GM, Thompson P, Smith T, Cole T, Amar A, Fielding DA, Redpath SM, Wilson JD.  2016.  Reply to comment on: Vegetation burning for game management in the UK uplands is increasing and overlaps spatially with soil carbon and protected areas. Biological Conservation. 195:295-296.
Eigenbrode SD, Birch ANE, Lindzey S, Meadow R, Snyder WE.  2016.  Review: A mechanistic framework to improve understanding and applications of push-pull systems in pest management. Journal of Applied Ecology. 53:202-212.
Barauna AC, Rouws LFM, Simoes-Araujo JL, Dos Reis Junior FB, Iannetta PPM, Maluk M, Goi SR, Reis VM, James EK, Zilli JE.  2016.  Rhizobium altiplani sp. nov. isolated from effective nodules on Mimosa pudica growing in untypically alkaline soil in Central Brazil. International Journal of Systematic and Evolutionary Microbiology. 66:1-7.
Auffret MD, Karhu K, Khachane A, Dungait JAJ, Fraser F, Hopkins DW, Wookey PA, Singh BK, Freitag TE, Hartley IP et al..  2016.  The role of microbial community composition in controlling soil respiration responses to temperature. PLoS One. 11:e1065448.
Young JC, Searle K, Butler A, Simmons P, Watt AD, Jordan A.  2016.  The role of trust in the resolution of conservation conflicts. Biological Conservation. 195:196-202.
Thomas CL, Alcock TD, Graham NS, Hayden R, Matterson S, Wilson L, Young SD, Dupuy LX, White PJ, Hammond JP et al..  2016.  Root morphology and seed and leaf ionomic traits in a Brassica napus L. diversity panel show wide phenotypic variation and are characteristic of crop habit. BMC Plant Biology.. 16
McDougall GJ, Austin C, van Schayk E, Martin P.  2016.  Salal (Gaultheria shallon) and aronia (Aronia melanocarpa) fruits from Orkney: phenolic content, composition and effect of wine making. Food Chemistry. 205:239-247.
Thomas-Sharma S, Abdurahman A, Ali S, Andrade-Piedra JL, Bao S, Charkowski AO, Crooke D, Kadian M, Kromann P, Struik PC et al..  2016.  Seed degeneration in potato: the need for an integrated seed health strategy to mitigate the problem in developing countries. Plant Pathology. 65:3-16.
Richards S, Paterson E, Withers PJA, Stutter MI.  2016.  Septic tank discharges as multi-pollutant hotspots in catchments. Science of the Total Environment. 542:854-863.
Ross LC, Austrheim G, Asheim LJ, Bjarnason G, Feilberg J, Fosaa AM, Hester AJ, Holand O, Jonsdottir IS, Mortensen LE et al..  2016.  Sheep grazing in the North Atlantic region: A long-term perspective on environmental sustainability. Ambio. 45:551-566.
Beckert MR, Smith P, Lilly A, Chapman SJ.  2016.  Soil and tree biomass carbon sequestration potential of silvopastoral and woodland pasture systems in North East Scotland. Agroforestry Systems. 90:371-383.
Habtom H, Demaneche S, Dawson LA, Azulay C, Matan O, Robe P, Gafny R, Simonet P, Jurkevitch E, Pasternak Z.  2016.  Soil characterisation by bacterial community analysis for forensic applications: a quantitative comparison of environmental technologies. Forensic Science International. 26:21-29.
Skelsey P, Elphinstone JG, Saddler GS, Wale SJ, Toth IK.  2016.  Spatial analysis of blackleg-affected seed potato crops in Scotland. Plant Pathology. 65:570-576.
Gonzalez J, Luque S, Poggio L, Smith R, Gimona A.  2016.  Spatial Bayesian belief networks as a planning decision tool for mapping ecosystem services trade-offs on multifunctional forested landscapes. Environmental Research. 144:15-26.
Sample JE, Baber I, Badger R.  2016.  A spatially distributed risk screening tool to assess climate and land use change impacts on water-related ecosystem services. Environmental Modelling and Software. 83:12-26.
Bailey M, Srivastava A, Conti L, Nelis S, Zhang CJ, Florance H, Love A, Milner J, Napier R, Grant M et al..  2016.  Stability of small ubiquitin-like modifier (SUMO) proteases OVERLY TOLERANT TO SALT1 and-2 modulates salicylic acid signalling and SUMO1/2 conjugation in Arabidopsis thaliana. Journal of Experimental Botany. 67:353-363.
Perez-Sancho J, Tilsner J, Samuels AL, Botella MA, Bayer EM, Rosado A.  2016.  Stitching organelles: organization and function of specialized membrane contact sites in plants. Trends in Cell Biology. 26:705-717.
Austrheim G, Speed JDM, Evju M, Hester AJ, Holand O, Loe LE, Martinsen V, Mobaek R, Mulder SJH, Thompson DBA et al..  2016.  Synergies and trade-offs between ecosystem services in an alpine ecosystem grazed by sheep - an experimental approach. Basic and Applied Ecology. 17:596-608.
Richards S, Withers PJA, Paterson E, McRoberts CW, Stutter MI.  2016.  Temporal variability in domestic point source discharges and their associated impact on receiving waters. Science of the Total Environment. 571:1275-1283.
Stocker BD, Prentice IC, Cornell SE, Davies-Barnard T, Finzi AC, Franklin O, Janssens I, Larmola T, Manzoni S, Nasholm T et al..  2016.  Terrestrial nitrogen cycling in earth system models revisited. New Phytologist. 210:1165-1168.
Sherwood P, Bonello P.  2016.  Testing the systemic induced resistance hypothesis with Austrian pine and Diplodia sapinea. Physiological and Molecular Plant Pathology. 94:118-125.
Sang N, Gold C, Miller DR.  2016.  The topological viewshed; embedding topological pointers into digital terrain models to improve GIS capability for visual landscape analysis. International Journal of Digital Earth. 9:1185-1205.
Snell HSK, Robinson D, Midwood AJ.  2016.  Tree species' influences on soil carbon dynamics revealed with natural abundance C-13 techniques. Plant and Soil. 400:285-296.
Pett TJ, Shwartz A, Irvine KN, Dallimer M, Davies ZG.  2016.  Unpacking the people - biodiversity paradox: a conceptual framework. Bioscience. 66:576-583.
Cammarano D, Zierden D, Stefanova L, Asseng S, O'Brien JJ, Jones JW.  2016.  Using historical climate observations to understand future climate change crop yield impacts in the Southeastern US. Climatic Change. 134:311-326.
Stone D, Costa D, Daniell TJ, Mitchell SM, Topp CFE, Griffiths BS.  2016.  Using nematode communities to test a European scale soil biological monitoring programme for policy development. Applied Soil Ecology. 97:78-85.
Basso B, Fiorentino C, Cammarano D, Schulthess U.  2016.  Variable rate nitrogen fertilizer response in wheat using remote sensing. Precision Agriculture. 17:168-182.
Wang JM, Lin H, Sun WC, Xia Y, Ma JW, Fu JR, Zhang ZL, Wu HZ, Qian MR.  2016.  Variations in the fate and biological effects of sulfamethoxazole, norfloxacin and doxycycline in different vegetable-soil systems following manure application. Journal of Hazardous Materials, 304, 49-57..
2015
Macedo D, Tavares L, McDougall GJ, Miranda HV, Stewart D, Ferreira RB, Tenreiro S, Outeiro TF, Santos CN.  2015.  (Poly)phenols protect from alpha-synuclein toxicity by reducing oxidative stress and promoting autophagy. Human Molecular Genetics. 24:1717-1732.
Flynn KJ, St John M, Raven JA, Skibinski DOF, Allen JI, Mitra A, Hofmann EE.  2015.  Acclimation, adaptation, traits and trade-offs in plankton functional type models: reconciling terminology for biology and modelling. Journal of Plankton Research. 37:683-691.
Sarkki S, Tinch R, Niemelä J, Heink U, Waylen KA, Timaeus J, Young JC, Watt AD, Neßhöver C, Van Den Hove S.  2015.  Adding ‘iterativity’ to the credibility, relevance, legitimacy: A novel scheme to highlight dynamic aspects of science-policy interfaces. Environmental Science and Policy. 54:505-512.
Sanchez-Marono N, Alonso-Betanzos A, Fontenla-Romero O, Brinquis-Nunez C, Polhill JG, Craig T, Dumitru A, Garcia-Mira R.  2015.  An agent-based model for simulating environmental behavior in an educational organization. Neural Processing Letters. 42:89-118.
Shin KH, Yang SH, Lee JY, Lim CW, Lee SC, Brown JWS, Kim SH.  2015.  Alternative splicing of mini-exons in the Arabidopsis leaf rust receptor-like kinase LRK10 genes affects subcellular localisation. Plant Cell Reports. 34:495-505.
Sarkies P, Selkirk ME, Jones JT, Blok VC, Boothby T, Goldstein B, Hanelt B, Ardila-Garcia A, Fast NM, Schiffer PM et al..  2015.  Ancient and novel small RNA pathways compensate for the loss of piRNAs in multiple independent nematode lineages. PLoS Biology. 13:e1002061.
Ferreira LMM, Celaya R, Santos AS, Mayes RW, Rodrigues MAM, Osoro K.  2015.  Application of long-chain alcohols as diet-composition markers in sheep fed on grass-white clover and heather-gorse plant species. Grass and Forage Science. 70:30-43.
Fray RG, Simpson GG.  2015.  The Arabidopsis epitranscriptome. Current Opinion in Plant Biology. 27:17-21.
Travis AJ, Norton GJ, Datta S, Sarma R, Dasgupta T, Savio FL, Macaulay M, Hedley PE, McNally KL, Sumon MH et al..  2015.  Assessing the genetic diversity of rice originating from Bangladesh, Assam and West Bengal. Rice. 8
Zhang RX, Calixto CPG, Tzioutziou NA, James AB, Simpson CG, Guo WB, Marquez Y, Kalyna M, Patro R, Eyras E et al..  2015.  AtRTD - a comprehensive reference transcript dataset resource for accurate quantification of transcript-specific expression in Arabidopsis thaliana. New Phytologist. 208:96-101.
Horgan GW, Song Y, Glasbey CA, van der Heijden GWAM, Polder G, Dieleman JA, Bink MCAM, van Eeuwijk FA.  2015.  Automated estimation of leaf area development in sweet pepper plants from image analysis. Functional Plant Biology. 42:486-492.
Dawson IK, Russell J, Powell W, Steffenson B, Thomas WTB, Waugh R.  2015.  Barley: a translational model for adaptation to climate change. New Phytologist. 206:913-931.
Sarkki S, Ficko AJ, Grunewald K, Nijnik M.  2015.  Benefits from and threats to European treeline ecosystem services: an exploratory study of stakeholders and governance. Regional Environmental Change. Published online.
Harrison K, Hoad G, Scott P, Simpson L, Horgan GW, Smyth E, Heys SD, Haggarty P.  2015.  Breast cancer risk and imprinting methylation in blood. Clinical Epigenetics. 7:ArticleNo.92.
Sheu SY, Chen MH, Liu WYY, Andrews M, James EK, Ardley JK, De Meyer SE, James TK, Howieson JG, Coutinho BG et al..  2015.  Burkholderia dipogonis sp. Nov., isolated from root nodules of Dipogon lignosus in New Zealand and Western Australia. International Journal of Systematic and Evolutionary Microbiology. 65:4716-4723.
Flanigan S, Sutherland LA.  2015.  Buying access to social capital? From collaboration to service provision in an agricultural co-operative Sociologia Ruralis. Published online.
Waylen KA, Martin-Ortega J, Blackstock KL, Brown I, Uribe BEA, Hernández SB, Bertoni MB, Bustos ML, Bayer AXC, Semerena RIE et al..  2015.  Can scenario-planning support community based natural resource management? Experiences from three countries in Latin America Ecology and Society. 20:ArticleNo.28.
Evans DM, Villar N, Littlewood NA, Pakeman RJ, Evans SA, Dennis P, Skartveit J, Redpath SM.  2015.  The cascading impacts of livestock grazing in upland ecosystems: a 10 year experiment. Ecosphere. 6:ArticleNo.42..
Specht A, Gordon IJ, Groves RH, Lambers H, Phinn SR.  2015.  Catalysing transdisciplinary synthesis in ecosystem science and management. Science of the Total Environment. 534:1-3.
Downie HF, Adu MO, Schmidt S, Otten W, Dupuy LX, White PJ, Valentine TA.  2015.  Challenges and opportunities for quantifying roots and rhizosphere interactions through imaging and image analysis. Plant, Cell and Environment. 38:1213-1232.
Chapman JA, Mascher M, Buluc A, Barry K, Georganas E, Session A, Strnadova V, Jenkins J, Seghal S, Oliker L et al..  2015.  Chromosome-scale assembly of the hexaploid wheat genome from whole genome shotgun sequencing. Genome Biology. 16
Wilkinson ME, Mackay E, Quinn PF, Stutter MI, Beven KJ, Macleod CJA, Macklin MG, Elkhatib Y, Percy B, Vitolo C et al..  2015.  A cloud based tool for knowledge exchange on local scale flood risk. Journal of Environmental Management. 161:38-50.
Smith SW, Johnson D, Quin SLO, Munro K, Pakeman RJ, van der Wal R, Woodin SJ.  2015.  Combination of herbivore removal and nitrogen deposition increases upland carbon storage. Global Change Biology.. 21:3036-3048.
Lee JS, Filatova T, Ligmann-Zielinska A, Hassani-Mahmooei B, Stonedahl F, Lorscheid I, Voinov A, Polhill JG, Sun Z, Parker DC.  2015.  The complexities of agent-based modeling output analysis. Journal of Artificial Societies and Social Simulation. 18:ArticleNo.4.
Sutherland LA, Peter S, Zagata L.  2015.  Conceptualising multi-regime interactions: the role of the agriculture sector in renewable energy transitions. Research Policy. 44:1543-1554.
Speed JDM, Martinsen V, Hester AJ, Holand O, Mulder MJA, Austrheim G.  2015.  Continuous and discontinuous variation in ecosystem carbon stocks with elevation across a treeline ecotone. Biogeosciences. 12:1615-1627.
Richards S, Paterson E, Withers PJA, Stutter MI.  2015.  The contribution of household chemicals to environmental discharges via effluents: Combining chemical and behavioural data. Journal of Environmental Management. 150:427-434.
Slee B, Hopkins J, Vellinga N.  2015.  Could the creative class be a factor in Scottish rural development? Scottish Affairs. 24:207-226.
Ewert F, Rotter RP, Bindi M, Webber H, Trnka M, Kersebaum KC, Olesen JE, Van Ittersum MK, Janssen S, Rivington M et al..  2015.  Crop modelling for integrated assessment of risk to food production from climate change. Environmental Modelling and Software. 72:287-303.
Bowler DE, Haase P, Kroncke I, Tackenberg O, Bauer HG, Brendel C, Brooker RW, Gerisch M, Henle K, Hickler T et al..  2015.  A cross-taxon analysis of the impact of climate change on abundance trends in central Europe. Biological Conservation. 187:41-50.
Zagata L, Sutherland LA.  2015.  Deconstructing the 'young farmer problem in Europe': towards a research agenda. Journal of Rural Studies. 38:39-51.
Wilson D, Dixon SD, Artz RRE, Smith TEL, Evans CD, Owen HJF, Archer E, Renou-Wilson F.  2015.  Derivation of greenhouse gas emission factors for peatlands managed for extraction in the Republic of Ireland and the United Kingdom. Biogeosciences. 12:5291-5308.
Powell J, Karunaratne S, Campbell CD, Yao HY, Robinson L, Singh BK.  2015.  Deterministic processes vary during community assembly for ecologically dissimilar taxa. Nature Communications. 6
Malolepszy A, Urbanski DF, James EK, Sandal N, Isono E, Stougaard J, Andersen SU.  2015.  The deubiquitinating enzyme AMSH1 is required for rhizobial infection and nodule organogenesis in Lotus japonicus. The Plant Journal. 83:719-731.
Mackay EB, Wilkinson ME, Macleod CJA, Beven K, Percy BJ, Macklin MG, Quinn PF, Stutter MI, Haygarth PM.  2015.  Digital catchment observatories: a platform for engagement and knowledge exchange between catchment scientists, policy makers, and local communities. Water Resources Research. 51:4815-4822.
Reavy B, Swanson MM, Cock PJA, Dawson LA, Freitag TE, Singh BK, Torrance L, Mushegain AR, Taliansky M.  2015.  Distinct circular single-stranded DNA viruses exist in different soil types. Applied and Environmental Microbiology. 81:3934-3945.
Sessin-Dilascio K, Prager K, Irvine KN, de Almeida Sinisgalli PA.  2015.  The dynamics of co-management and social capital in protected area management - The Cardoso Island State Park in Brazil. World Development. 67:475-489.
Holden NJ, Jackson RW, Schikora A.  2015.  Editorial on plants as alternative hosts for human and animal pathogens. Frontiers in Microbiology. 6
Deng WN, Hallett PD, Jeng DS, Squire GR, Toorop PE, Iannetta PPM.  2015.  The effect of natural seed coatings of Capsella bursa-pastoris L. Medik. (shepherd's purse) on soil-water retention, stability and hydraulic conductivity. Plant and Soil. 387:167-176.
Zhao G, Hoffmann H, van Bussel LGJ, Enders A, Specka X, Sosa C, Yeluripati JB, Tao FL, Constantin J, Raynal H et al..  2015.  Effect of weather data aggregation on regional crop simulation for different crops, production conditions, and response variables. Climate Research. 65:141-157.
Barzman M, Barberi P, Birch ANE, Boonekamp P, Dachbrodt-Saaydeh S, Graf B, Hommel B, Jensen JE, Kiss J, Kudsk P et al..  2015.  Eight principles of integrated pest management. Agronomy for Sustainable Development. 35:1199-1215.
Wylie CE, Shaw DJ, Fordyce FM, Lilly A, Pirie S, McGorum BC.  2015.  Equine grass sickness in Scotland: a case control study of environmental geochemical risk factors. Equine Veterinary Journal. Published online..
Sang N, Hagerhall C, Ode A.  2015.  The Euler character: a new type of visual landscape metric? Environment and Planning B. 42:110-132.
Pourkheirandish M, Hensel G, Kilian B, Senthil N, Chen G, Sameri M, Azhaguvel P, Sakuma S, Dhanagond S, Sharma R et al..  2015.  Evolution of the seed dispersal system in barley. Cell. 162:527-539.
Schwerdt JG, MacKenzie K, Wright F, Oehme D, Wagner JM, Harvey AJ, Shirley NJ, Burton RA, Schreiber M, Halpin C et al..  2015.  Evolutionary dynamics of the cellulose synthase gene superfamily in grasses. Plant Physiology. 168:968-983.
Fry WE, Birch PRJ, Judelson HS, Grunwald NJ, Danies G, Everts KL, Gevens AJ, Gugino BK, Johnson DA, Johnson SB et al..  2015.  Five reasons to consider Phytophthora infestans a reemerging pathogen. Phytopathology. 105:966-981.
Matamoros MA, Saiz A, Penuelas M, Bustos-Sanmamed P, Mulet JM, Barja MV, Rouhier N, Moore M, James EK, Dietz KJ et al..  2015.  Function of glutathione peroxidases in legume root nodules. Journal of Experimental Botany. 66:2979-2990.
Skelsey P, Newton AC.  2015.  Future environmental and geographic risks of Fusarium head blight of wheat in Scotland. European Journal of Plant Pathology. 142:133-147.
Tamburic B, Evenhuis CR, Suggett DJ, Larkum AWD, Raven JA, Ralph PJ.  2015.  Gas transfer controls carbon limitation during biomass production by marine microalgae. Chemsuschem. 8:2727-2736.
Love AJ, Makarov VV, Sinitsyna OV, Shaw J, Yaminsky IV, Kalinina NO, Taliansky ME.  2015.  A genetically modified tobacco mosaic virus that can produce gold nanoparticles from a metal salt precursor. Frontiers in Plant Science. 6
Houston K, Burton RA, Sznajder B, Rafalski AJ, Dhugga KS, Mather DE, Taylor J, Steffenson BJ, Waugh R, Fincher GB.  2015.  A genome-wide association study for culm cellulose content in barley reveals candidate genes co-expressed with members of the cellulose synthase a gene family. PLoS ONE. 10:e0130890.
Spinney J, Aldred R, Brown KM.  2015.  Geographies of citizenship and everyday (im)mobility. Geoforum. 64:325-332.
Yeluripati JB, del Prado A, Sanz-Cobena A, Rees R, Li C, Chadwick D, Tilston E, Topp CFE, Cardenas L, Ingraham P et al..  2015.  Global Research Alliance Modelling Platform (GRAMP): An open web platform for modelling greenhouse gas emissions from agro-ecosystems. Computers and Electronics in Agriculture. 111:112-120.
Jackson-Blake LA, Dunn SM, Helliwell RC, Skeffington RA, Stutter MI, Wade AJ.  2015.  How well can we model stream phosphorus concentrations in agricultural catchments? Environmental Modelling and Software. 64:31-46.
Ma L, Bartholome A, Tong MH, Qin ZW, Yu Y, Shepherd T, Kyeremeh K, Deng H, O'Hagan D.  2015.  Identification of a fluorometabolite from Streptomyces sp MA37: (2R3S4S)-5-fluoro-2,3,4-trihydroxypentanoic acid. Chemical Science. 6:1414-1419.
Lu YL, Song S, Wang RS, Liu ZY, Meng J, Sweetman AJ, Jenkins A, Ferrier RC, Li H, Luo W et al..  2015.  Impacts of soil and water pollution on food safety and health risks in China. Environment International. 77:5-15.
Shepherd LVT, Alexander CJ, Hackett CA, McRae D, Sungurtas JA, Verrall SR, Morris JA, Hedley PE, Rockhold D, Belknap W et al..  2015.  Impacts on the metabolome of down-regulating polyphenol oxidase in potato tubers. Transgenic Research. 24:447-461.
Brooker RW, Bennett AE, Cong WF, Daniell TJ, George TS, Hallett PD, Hawes C, Iannetta PPM, Jones HG, Karley AJ et al..  2015.  Improving intercropping: a synthesis of research in agronomy, plant physiology and ecology. New Phytologist. 206:107-117.
Brouwer R, Martin-Ortega J, Dekker T, Sardonini L, Andreu J, Kontogianni A, Skourtos M, Raggi M, Viaggi D, Pulido-Velazquez M et al..  2015.  Improving value transfer through socio-economic adjustments in a multicountry choice experiment of water conservation alternatives. Australian Journal of Agricultural and Resource Economics. 59:458-478.
Drake AJ, O'Shaughnessy PJ, Bhattacharya S, Monteiro A, Kerrigan D, Goetz S, Raab A, Rhind SM, Sinclair KD, Meharg AA et al..  2015.  In utero exposure to cigarette chemicals induces sex-specific disruption of one-carbon metabolism and DNA methylation in the human fetal liver. BMC Medicine. 13
Lee AM, Bjorkvoll EM, Hansen BB, Albon SD, Stien A, Saether BE, Engen S, Veiberg V, Loe LE, Grotan V.  2015.  An integrated population model for a long-lived ungulate: more efficient data use with Bayesian methods. Oikos. 124:806-816.
Schoeb C, Kerle S, Karley AJ, Morcillo L, Pakeman RJ, Newton AC, Brooker RW.  2015.  Intraspecific genetic diversity and composition modify species-level diversity-productivity relationships. New Phytologist. 205:720-730.
Littlewood NA, Nau BS, Pozsgai G, Stockan JA, Stubbs A, Young MR.  2015.  Invertebrate species at risk from ash dieback in the UK. Journal of Insect Conservation. 19:75-85.
Morris JL, Leake JR, Stein WE, Berry CM, Marshall JEA, Wellman CH, Milton JA, Hillier S, Mannolini F, Quirk J et al..  2015.  Investigating Devonian trees as geo-engineers of past climates: linking palaeosols to palaeobotany and experimental geobiology. Palaeontology. 58:787-801.
Ribeiro A, Golicz A, Hackett CA, Milne I, Stephen G, Marshall D, Flavell AJ, Bayer M.  2015.  An investigation of causes of false positive single nucleotide polymorphisms using simulated reads from a small eukaryotic genome. BMC Bioinformatics. 16
Barraclough D, Smith P, Worrall F, Black HIJ, Bhogal A.  2015.  Is there an impact of climate change on soil carbon contents in England and Wales? European Journal of Soil Science. 66:451-462.
Stutter MI, Shand CA, George TS, Blackwell MSA, Dixon L, Bol R, Mackay RL, Richardson AE, Condron LM, Haygarth PM.  2015.  Land use and soil factors affecting accumulation of phosphorus species in temperate soils. Geoderma. 257:29-39.
Crittenden PD, Scrimgeour CM, Minnullina G, Sutton MA, Tang YS, Theobald MR.  2015.  Lichen response to ammonia deposition defines the footprint of a penguin rookery. Biogeochemistry. 122:295-311.
Brown JWS, Simpson C, Marquez Y, Gadd GM, Barta A, Kalyna M.  2015.  Lost in translation: pitfalls in deciphering plant alternative splicing transcripts. The Plant Cell. 27:2083-2087.
Rutgers M, Orgiazzi A, Gardi C, Rombke J, Jansch S, Keith AM, Neilson R, Boag B, Schmidt O, Murchie AK et al..  2015.  Mapping earthworm communities in Europe. Applied Soil Ecology. 97:98-111.
Bohn T, McDougall GJ, Alegria A, Alminger M, Arrigoni E, Aura AM, Brito C, Cilla A, El SN, Karakaya S et al..  2015.  Mind the gap-deficits in our knowledge of aspects impacting the bioavailability of phytochemicals and their metabolites - a position paper focusing on carotenoids and polyphenols. Molecular Nutrition and Food Research. 59:1307-1323.
Shepherd LVT, Hackett CA, Alexander CA, McNicol JW, Sungurtas JA, Stewart D, McCue K, Belknap WR, Davies HV.  2015.  Modifying glycoalkaloid content in transgenic potato - Metabolome impacts. Food Chemistry. 187:437-443.
Prigigallo MI, Mosca S, Cacciola SO, Cooke DEL, Schena L.  2015.  Molecular analysis of Phytophthora diversity in nursery-grown ornamental and fruit plants. Plant Pathology. 64:1308-1319.
Wells B, Shaw H, Innocent G, Guido S, Hotchkiss E, Parigi M, Opsteegh M, Green J, Gillespie S, Innes EA et al..  2015.  Molecular detection of Toxoplasma gondii in water samples from Scotland and a comparison between the 529bp real-time PCR and ITS1 nested PCR. Water Research. 87:175-181.
Flemsaeter F, Setten G, Brown KM.  2015.  Morality, mobility and citizenship: Legitimising mobile subjectivities in a contested outdoors. Geoforum. 64:342-350.
Macadam CR, Stockan JA.  2015.  More than just fish food: ecosystem services provided by freshwater insects. Ecological Entomology. 40:113-124.
Amar D, Frades I, Diels T, Zaltzman D, Ghatan N, Hedley PE, Alexandersson E, Tzfadia O, Shamir R.  2015.  The MORPH-R web server and software tool for predicting missing genes in biological pathways. Physiologia Plantarum. 155:12-20.
Cock PJA, Chilton JM, Gruning B, Johnson JE, Soranzo N.  2015.  NCBI BLASTplus integrated into Galaxy. Technical note. GigaScience. 4
van der Wal R, Fischer A, Selge S, Larson B.  2015.  Neither the public nor experts judge species primarily on their origins. Environmental Conservation. 42:349-355.
Sanhueza M, Chai A, Smith C, McCray BA, Simpson TI, Taylor JP, Pennetta G.  2015.  Network analyses reveal novel aspects of ALS pathogenesis. PLoS Genetics. 11:e1005107.
Lu YW, McGavin W, Cock PJA, Schnettler E, Yan F, Chen JP, MacFarlane SA.  2015.  Newly identified RNAs of raspberry leaf blotch virus encoding a related group of proteins. Journal of General Virology. 96:3432-3439.
McVittie A, Norton L, Martin-Ortega J, Siameti I, Glenk K, Aalders IH.  2015.  Operationalizing an ecosystem services-based approach using Bayesian Belief Networks: An application to a riparian buffer zone. Ecological Economics. 110:15-27.
Zuber T, Holm D, Byrne P, Ducreux L, Taylor M, Kaiser M, Stushnoff C.  2015.  Optimization of in vitro inhibition of HT-29 colon cancer cell cultures by Solanum tuberosum L. extracts. Food and Function. 6:72-83.
McNeilly TN, Mitchell MC, Corbishley A, Nath M, Simmonds H, McAteer SP, Mahajan A, Low JC, Smith DGE, Huntley JF et al..  2015.  Optimizing the protection of cattle against Escherichia coli O157:H7 colonization through immunization with different combinations of H7 Flagellin, Tir, Intimin-531 or EspA. PLoS ONE. 10:e0128391.
Shyntum DY, Theron J, Venter SN, Moleleki LN, Toth IK, Coutinho TA.  2015.  Pantoea ananatis utilizes a type VI secretion system for pathogenesis and bacterial competition. Molecular Plant-Microbe Interactions. 28:420-431.
Vagiri M, Conner S, Stewart D, Andersson SC, Verrall S, Johansson E, Rumpunen K.  2015.  Phenolic compounds in blackcurrant (Ribes nigrum L.) leaves relative to leaf position and harvest date. Food Chemistry. 172:135-142.
White PJ, Bowen HC, Farley E, Shaw EK, Thompson JA, Wright G, Broadley MR.  2015.  Phylogenetic effects on shoot magnesium concentration. Crop and Pasture Science. 66:1241-1248.
Schlaeppi K, Bulgarelli D.  2015.  The plant microbiome at work. Molecular Plant Microbe Interactions. 28:212-217.
Multari S, Stewart D, Russell WR.  2015.  Potential of Fava Bean as future protein supply to partially replace meat intake in the human diet. Comprehensive Reviews in Food Science and Safety. 14:511-522.
Dunn SM, Towers W, Dawson JJC, Sample J, MacDonald J.  2015.  A pragmatic methodology for horizon scanning of water quality linked to future climate and land use scenarios. Land Use Policy. 44:131-144.
Roberts AMI, Tansey C, Smithers RJ, Phillimore AB.  2015.  Predicting a change in the order of spring phenology in temperate forests. Global Change Biology. 21:2603-2611.
Aitkenhead MJ, Donnelly D, Sutherland LA, Miller DG, Coull MC, Black HIJ.  2015.  Predicting Scottish topsoil organic matter content from colour and environmental factors. European Journal of Soil Science. 66:112-120.
Mills AJ, van der Vyver M, Gordon IJ, Patwardhan A, Marais C, Blignaut J, Sigwela A, Kgope B.  2015.  Prescribing innovation within a large-scale restoration programme in degraded subtropical thicket in South Africa. Forests. 6:4328-4348.
Griffiths BS, Hallett PD, Daniell TJ, Hawes C, Squire GS, Mitchell SM, Caul S, Valentine TA, Binnie K, Adeloye AJ et al..  2015.  Probing soil physical and biological resilience data from a broad sampling of arable farms in Scotland. Soil Use and Management. 31:491-503.
Schulz C, Ioris A, Martin-Ortega J, Glenk K.  2015.  Prospects for payments for ecosystem services in the Brazilian Pantanal: a scenario analysis. The Journal of Environment and Development. 24:26-53.
Stavang JA, Freitag S, Foito A, Verrall S, Heide OM, Stewart D, Sonsteby A.  2015.  Raspberry fruit quality changes during ripening and storage as assessed by colour, sensory evaluation and chemical analyses. Scientia Horticulturae. 195:216-225.
O'Leary GJ, Christy B, Nuttall J, Huth J, Cammarano D, Stöckle C, Basso B, Shcherbak I, Fitzgerald G, Luo Q et al..  2015.  Response of wheat growth, grain yield and water use to elevated CO2 under a Free Air CO2 Enrichment (FACE) experiment and modelling in a semi-arid environment. Global Change Biology.. 21:2670-2686.
Kontopoulou CK, Giagkou S, Stathi E, Savvas D, Iannetta PPM.  2015.  Responses of hydroponically grown common bean fed with nitrogen-free nutrient solution to root inoculation with N-2-fixing bacteria. Hortscience. 50:597-602.
Eigenbrode SD, Birch ANE, Lindzey S, Meadow R, Snyder WE.  2015.  Review: A mechanistic framework to improve understanding and applications of push-pull systems in pest management. Journal of Applied Ecology. 53:202-212.
Navarro E, Fabregue O, Scorretti R, Reboulet J, Simonet P, Dawson LA, Demaneche S.  2015.  RisaAligner software for aligning fluorescence data between Agilent 2100 Bioanalyzer chips: application to soil microbial community analysis. Biotechniques. 59:347-358.
Snell HSK, Robinson D, Midwood AJ.  2015.  Sampling root-respired CO2 in-situ for C-13 measurement. Plant and Soil, 393, 259-271..
Boden LA, Auty H, Bessell P, Duckett D, Liu J, Kyle C, McKee A, Sutherland LA, Reynolds J, Bronsvoort BMD et al..  2015.  Scenario planning: The future of the cattle and sheep industries in Scotland and their resiliency to disease. Preventive Veterinary Medicine. 121:353-364.
Slee RW, Miller DG.  2015.  School closures as a driver of rural decline in Scotland: a problem in pursuit of some evidence? Scottish Geographical Journal. 131:78-97.
Sample JE, Duncan N, Ferguson M, Cooksley S.  2015.  Scotland's hydropower: Current capacity, future potential and the possible impacts of climate change. Renewable and Sustainable Energy Reviews. 52:111-122.
Albert A, Auffret AG, Cosyns E, Cousins SAO, D'Hondt B, Eichberg C, Eycott AE, Heinken T, Hoffmann M, Jaroszewicz B et al..  2015.  Seed dispersal by ungulates as an ecological filter: a trait-based meta-analysis. Oikos. 124:1109-1120.
Nazaries L, Tottey W, Robinson LJ, Khachane A, Al-Soud WA, Sorensen S, Singh BK.  2015.  Shifts in the microbial community structure explain the response of soil respiration to land-use but not to climate warming. Soil Biology and Biochemistry. 89:123-134.

Printed from /publications/publications-list/ag/S?page=4&sort=year&order=desc on 22/02/24 08:31:37 AM

The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.