Publications list
Filters: First Letter Of Last Name is S [Clear All Filters]
Pine microsatellite markers allow roots and ectomycorrhizas to be linked to individual trees. New Phytologist. 165:295-304. Abstract
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2005.
FragMatch - a programme for the analysis of DNA fragment data. Mycorrhiza. 17(2):133-136.
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2007.
Secreted pectin monooxygenases drive plant infection by pathogenic oomycetes. Science. 373:774-779.
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2021.
A unified classification system for eukaryotic transposable elements. Nature Reviews Genetics. 8:973-982. Abstract
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2007.
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2020.
Characterisation of Phytophthora inundata according to host range, morphological variation and multigene molecular phylogeny. Phytopathologia Mediterranea. 52:46-65.
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2013.
Molecular and biochemical examination of spraing disease in potato tuber in response to Tobacco rattle virus infection. Molecular Plant-Microbe Interactions (MPMI). 29:822-828.
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2016.
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2013.
Alteration and resilience of the soil microbial community following compost amendment: effects of compost level and compost-borne microbial community. Environmental Microbiology. 8(2):247-257.
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2006.
Genetic variability of Chlamydophila abortus strains assessed by PCR-RFLP analysis of polymorphic membrane protein-encoding genes. Veterinary Microbiology. 151:284-290.
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2011.
Coupling the GAL4 UAS system with alcR for versatile cell type-specific chemically inducible gene expression in Arabidopsis. Plant Biotechnology Journal. 5:465-476. Abstract
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2007.
Two grapevine viruses in an ornamental Vitis species from Scotland. Journal of Plant Pathology. 87:-76. Abstract
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2005.
The interaction between dam methylation sites and Xha1 restriction digest sites in Escherichia coli O157: H7 EDL933. Journal of Applied Microbiology. 102:820-825. Abstract
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2007.
The impact of computer aided architectural design programs on conceptual design in an educational context. Design Studies. 35:412-428.
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2014.
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2010.
Spring phenology shows genetic variation among and within populations in seedlings of Scots pine (Pinus sylvestris L.) in the Scotish Highlands. Plant Ecology and Diversity. 6:523-536.
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2013.
Seasonal patterns of photochemical capacity and spring phenology reveal genetic differentiation among native Scots pine (Pinus sylvetsris L.) populations in Scotland. Forest Ecology and Management. 262:1020-1029.
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2011.
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2014.
Reconstruction of monocotyledonous proto-chromosomes reveals faster evolution in plants than in animals. Proceedings of the National Academy of Sciences, USA. 106:14908-14913.
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2009.
Characterization of immune system cell subsets in fixed tissues from alpine chamois (Rupicapra rupicapra). Journal of Comparative Pathology. 155:207-212.
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2016.
Association between hours worked in paid employment and diet quality, frequency of eating out and consuming takeaways in the UK. Public Health Nutrition. 22:3368-3376.
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2019.
A spatially distributed risk screening tool to assess climate and land use change impacts on water-related ecosystem services. Environmental Modelling and Software. 83:12-26.
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2016.
Scotland's hydropower: Current capacity, future potential and the possible impacts of climate change. Renewable and Sustainable Energy Reviews. 52:111-122.
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2015.
A methyl transferase links the circadian clock to the regulation of alternative splicing. Nature. 468:112-116.
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2010.
Early photosynthetic eukaryotes inhabited low-salinity habitats. Proceedings of the National Academy of Sciences of the USA. 114:E7737-E7745.
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2017.
A neoproterozoic transition in the marine nitrogen cycle. Current Biology. 24:652-657.
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2014.
An agent-based model for simulating environmental behavior in an educational organization. Neural Processing Letters. 42:89-118.
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2015.
Spatial sampling and public opinion in environmental management: A case study of the Ythan catchment. Land Use Policy. 25(1):30-42.
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2008.
Informing common pool resource problems: A survey of preference for catchment management strategies amongst farmers and the general public in the Ythan river catchment. Journal of Environmental Management. 88(4):1161-1174.
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2008.
The topological viewshed; embedding topological pointers into digital terrain models to improve GIS capability for visual landscape analysis. International Journal of Digital Earth. 9:1185-1205.
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2016.
The Euler character: a new type of visual landscape metric? Environment and Planning B. 42:110-132.
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2015.
Landscape metrics and visual topology in the analysis of landscape preference. Environment and Planning B. 35(3):504-520.
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2008.
The topological viewshed; embedding topological pointers into digital terrain models to improve GIS capability for visual landscape analysis. International Journal of Digital Earth. 9
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2016.
Network analyses reveal novel aspects of ALS pathogenesis. PLoS Genetics. 11:e1005107.
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2015.
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2017.
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2017.
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2012.
Phosphorus-zinc interactions in cotton: consequences for biomass production and nutrient-use efficiency in photosynthesis. Physiologia Plantarum. 166:996-1007.
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2019.
Diverse genotypes of Bradyrhizobium nodulate herbaceous Chamaecrista (Moench) Fabaceae, Caesalpinioideae) species in Brazil. Systematic and Applied Microbiology. 40:69-79.
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2017.
Genetic diversity analysis in Vicia species using retrotransposon-based SSAP markers. Molecular Genetics and Genomics. 278:433-441. Abstract
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2007.
Effects of drought and shade on nitrogen cycling in the leavers and canopy of mediterranean Qurecus seedlings. Plant and Soil. 316:45-56.
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2009.
A synthetic system for expression of components of a bacterial microcompartment. Microbiology-SGM. 159:2427-2436.
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2013.
Ancient and novel small RNA pathways compensate for the loss of piRNAs in multiple independent nematode lineages. PLoS Biology. 13:e1002061.
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2015.
Social equity in governance of ecosystem services: synthesis from European treeline areas. Climate Research. 73:31-44.
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2017.
Managing science-policy interfaces for impact: interactions within the environmental governance meshwork. Environmental Science and Policy. 113:21-30.
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2020.
Reconstructive social innovation cycles in women led initiatives in rural areas. Sustainability. 13:ArticleNo.1231.
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2021.
Social equity in governance of ecosystem services: synthesis from European treeline areas. Climate Research. 73:31-44.
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2017.
Human values as catalysts and consequences of social innovations. Forest Policy and Economics. 104:33-44.
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2019.
Assessing the resilient provision of ecosystem services by social-ecological systems: introduction and theory. Climate Research. 73:7-15.
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2017.
Adding ‘iterativity’ to the credibility, relevance, legitimacy: A novel scheme to highlight dynamic aspects of science-policy interfaces. Environmental Science and Policy. 54:505-512.
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2015.
Benefits from and threats to European treeline ecosystem services: an exploratory study of stakeholders and governance. Regional Environmental Change. 16:2019-2032.
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2016.
Beyond participation! Social-ecological innovations facilitating movement from technocratic state to collaborative landscape governance in Ukraine. Landscape Ecology. Published online..
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In Press.
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2019.
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2017.
Benefits from and threats to European treeline ecosystem services: an exploratory study of stakeholders and governance. Regional Environmental Change. Published online.
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2015.
The tomato genome sequence provides insights into fleshy fruit evolution. Nature. 485:635-641.
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2012.
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2010.
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2012.
Reviewing the carbon cycle dynamics and carbon sequestration potential of Cyperus papyrus L. wetlands in tropical Africa. Wetlands Ecology and Management. 22:143-155.
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2014.
Impacts of exceptional and extreme inter-annual climatic events on the net ecosystem carbon dioxide exchange of a Sitka spruce forest. Agricultural and Forest Meteorology. 184:147-157.
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2014.
How to manage the impact of gene flow on oilseed rape grain quality? Simulation case studies of three contrasted landscapes European Journal of Agronomy. 38:32-42.
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2012.
Population structure of Phytophthora infestans collected on potato and tomato in Italy. Plant Pathology. Published online..
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2021.
Riffle-pool maintenance and flow convergence routing confirmed on a large gravel bed river. Geomorphology. 114(3):143-160.
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2010.
In situ degradation characteristics as predictors of in vivo digestibility and metabolizable energy values of forages and wheat straw. Journal of Applied Animal Research. 37(1):77-81.
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2010.
A bifunctional D12, D15-desaturase from Acanthamoeba castellanii directs the synthesis of highly unusual n-1 series unsaturated fatty acids. Journal of Biological Chemistry. 281:36533-36541. Abstract
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2007.
Antiviral activity of HPMPC (cidofovir) against orf virus infected lambs. Antiviral Research. 73:169-174. Abstract
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2007.
An agent-based model to simulate meat consumption behaviour of consumers in Britain. Journal of Artificial Societies and Social Simulation. 22:ArticleNo.8.
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2019.
Phosphorus loss in overfertilized soils: The selective P partitioning and redistribution between particle size separates. European Journal of Agronomy. 27(1):72-80.
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2007.
Myocardial and systemic inflammation in acute stress-induced (Takotsubo) cardiomyopathy. Circulation. 129:1581-1592.
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2019.
Water balance dynamics during ten years of ecological development at ChickenCreek catchment. Vadose Zone Journal. 16:1-14.
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2017.
Use of genome sequence data in the design and testing of SSR markers for Phytophthora species. BMC Genomics. 9:620-643. Abstract
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2008.
Detection and quantification of Phytophthora ramorum, P. kernoviae, P. citricola and P. quercina in symptomatic leaves by multiplex real-time PCR. Molecular Plant Pathology. 7:365-379. Abstract
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2006.
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2008.
Assessing the potential of regions of the nuclear and mitochondrial genome to develop a 'molecular tool box' for the detection and characterization of Phytophthora species. Journal of Microbiological Methods. 67:70-85. Abstract
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2006.
Limited evolutionary rescue of locally adapted populations facing climate change. Philosophical Transactions of the Royal Society B. 368:e20120083.
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2013.
Editorial: Plants as alternative hosts for human and animal pathogens - second edition. Frontiers in Microbiology. 11:ArticleNo.1439.
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2020.
Long-term macronutrient stoichiometry of UK ombrotrophic peatlands. Science of the Total Environment. 572:1561-1572.
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2016.
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2016.
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2019.
The plant microbiome at work. Molecular Plant Microbe Interactions. 28:212-217.
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2015.
Comparative genetic mapping reveals synteny and collinearity between the American cranberry and diploid blueberry genomes. Molecular Breeding. 38:ArticleNo.9.
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2018.
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2018.
The susceptibility of selected conifer foliage to infection with Phytophthora lateralis. Forest Pathology. 47:ArticleNo.e12333.
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2017.
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2019.
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2011.
The role of Variovorax and other Comamonadaceae in sulphur transformations by microbial wheat rhizosphere communities exposed to different sulphur fertilization regimes. Environmental Microbiology. 10(6):1486-1500.
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2008.
Estimating root-soil contact from 3-D X-ray microtomographs. European Journal of Soil Science. 63:776-786.
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2012.
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2013.
Ancient barley landraces adapted to marginal soils demonstrate exceptional tolerance to manganese limitation. Annals of Botany.. 123:831-843.
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2019.
Inferring the origin and dietary history of beef from C, N and S stable isotope ratio analysis. Food Chemistry. 91:545-549. Abstract
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2005.
The mixotrophic nature of photosynthetic plants. Functional Plant Biology. 40:425-438.
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2013.
Evolution of facilitation requires diverse communities. Nature Ecology and Evolution. 2:1381-1385.
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2018.
Intraspecific genetic diversity and composition modify species-level diversity-productivity relationships. New Phytologist. 205:720-730.
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2015.
Consequences of facilitation: one plant's benefit is another plant's cost. Functional Ecology. 28:500-508.
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2014.
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2014.
Direct and indirect interactions co-determine species composition in nurse plant systems. Oikos. 122:1371-1379.
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2013.
Variability in functional traits mediates plant interactions along stress gradients. Journal of Ecology. 101:753-762.
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2013.
Species but not genotype diversity strongly impacts the establishment of rare colonisers. Functional Ecology. 31:1462-1470.
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2017.
Foundation species influence trait-based community assembly. New Phytologist. 196:824-834.
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2012.
The context dependence of beneficiary feedback effects in plant facilitations. New Phytologist. 204:386-396.
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2014.
Cultivar differences and impact of plant-plant competition on temporal patterns of nitrogen and biomass accumulation. Frontiers in Plant Science. 10:ArticleNo.215.
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2019.
Temporal dynamism of resource capture: a missing factor in ecology? Trends in Ecology and Evolution. 33:277-286.
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2018.
Plant-plant competition influences temporal dynamism of soil microbial enzyme activity. Soil Biology and Biochemistry. 139:ArticleNo.107615..
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2019.
Ancient class of translocated oomycete effectors targets the host nucleus. Proceedings of the National Academy of Sciences, USA. 107:17421-17426.
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2010.
A highly mutagenised barley (cv. Golden Promise) TILLING population coupled with strategies for screening-by-sequencing. Plant Methods. 15:ArticleNo.99..
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2019.
Comparative transcriptomics in the Triticeae. BMC Genomics. 10:-285. Abstract
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2009.
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2014.
International Barley Sequencing Consortium - at the threshold of efficient access to the barley genome. Plant Physiology. 149:142-147. Abstract
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2009.
A review of the role of excess soil moisture conditions in constraining farm practices under Atlantic conditions. Soil Use and Management. 28:580-589.
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2012.
Learning to live with social-ecological complexity: An interpretive analysis of learning in 11 UNESCO Biosphere Reserves. Global Environmental Change. 50:75-87.
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2018.
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2012.
Prospects for payments for ecosystem services in the Brazilian Pantanal: a scenario analysis. The Journal of Environment and Development. 24:26-53.
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2015.
The value base of water governance: a multi-disciplinary perspective. Ecological Economics. 131:241-249.
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2017.
Applying a 'Value Landscapes Approach' to conflicts in water governance: The case of the Paraguay-Parana waterway. Ecological Economics. 138:47-55.
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2017.
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2014.
Evolutionary dynamics of the cellulose synthase gene superfamily in grasses. Plant Physiology. 168:968-983.
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2015.
A molecular method to assess Phytophthora diversity in environmental samples. Journal of Microbiological Methods. 88:356-368.
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2011.
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2021.
Response of the moss Racomitrium lanuginosum to changes in sheep grazing and snow-lie due to a snow-fence. Applied Vegetation Science. 10:229-238. Abstract
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2007.
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2019.
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2011.
Seeing is not everything: Exploring the landscape experiences of different publics. Landscape and Urban Planning.. 34(4):397-424.
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2009.
Cassava Ivorian bacilliform virus is a member of the genus Anulavirus. Archives of Virology. 159:2791-2793.
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2014.
Planning for rural development in Scotland: A new role for local landscape designations? Planning Theory and Practice. 8:509-528.
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2007.
Local landscape designations in Scotland: Opportunity or barrier to effective landscape management. Landscape and Urban Planning. 81(3):257-269.
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2007.
Analysis of the distribution of marker classes in a genetic linkage map: A case study in Norway Spruce (Picea.abies Karst). Tree Genetics and Genomes. 1:93-102. Abstract
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2005.
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2014.
Identifying environmental drivers of insect phenology across space and time: Culicoides in Scotland as a case study. Bulletin of Entomological Research. 103:155-170.
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2013.
A Monte Carlo filtering application for systematic sensitivity analysis of computable general equilibrium result. Economic Systems Research. 31:404-422.
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2019.
Influence of prenatal nutrition and obesity on tissue specific fat mass and obesity-associated (FTO) gene expression. Reproduction. 139(1):265-274.
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2010.
Towards a method of evaluating social innovation in forest-dependent communities: Firsy suggestions from a a science-stakeholder collaboration. Forest Policy and Economics. 104:9-22.
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2019.
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2013.
How people familiarise themselves with complex ecological concepts - anchoring of social representations of invasive non-native species. Journal of Community and Applied Social Psychology. 21:297-311.
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2011.
Public and professional views on invasive non-native species - a qualitative social scientific investigation. Biological Conservation. 144:3089-3097.
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2011.
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2012.
Movement protein of hordeivirus interacts in vitro and in vivo with coilin, a major structural protein of Cajal bodies. Doklady Biochemistry and Biophysics. 442:57-60.
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2012.
Projections of changes in grassland soil organic carbon under climate change are relatively insensitive to methods of model initialization. European Journal of Soil Science. 64:229-238.
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2013.
Modelling nitrous oxide emissions from mown-grass and grain-cropping systems: Testing and sensitivity analysis of DailyDayCent using high frequency measurements. Science of the Total Environment. 572:955-977.
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2016.
Modelling soil organic carbon storage with RothC in irrigated Vertisols under cotton cropping systems in the sub-tropics. Soil and Tillage Research. 143:38-49.
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2014.
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2016.
Genetic increases in growth do not lead to trade-offs with ecologically important litter and fine root traits in Norway spruce. Forest Ecology and Management. 446:54-62.
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2019.
Variable extent of hybridization between invasive sika (Cervus nippon) and native red deer (C-elaphus) in a small geographical area. Molecular Ecology. 18(5):862-876.
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2009.
Onsite geometric calibration of RPAS mounted sensors for SfM photogrammetric geomorphological surveys. Earth Surface Processes and Landforms..
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2022.
Phenotypic correlates of hybridisation between red and sika deer (genus Cervus). Journal of Animal Ecology. 79(2):414-425.
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2010.
The role of free radicals in brassica-induced anaemia of sheep: an ESR spin trapping study. Asian-Australiasian Journal of Animal Sciences. 25:1404-1410.
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2012.
SerpinA3N is a novel hypothalamic gene upregulated by a high-fat diet and leptin in mice. Genes and Nutrition. 13:ArticleNo.28.
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2018.
Simulating climate change impacts on hybrid-poplar and black locust short rotation coppices. Forests. 9:ArticleNo.419.
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2018.
The dynamics of co-management and social capital in protected area management - The Cardoso Island State Park in Brazil. World Development. 67:475-489.
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2015.
Ecosystem services as an integrative framework: what is the potential? Land Use Policy. 75:549-556.
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2018.
The impact of increased food availability on survival of a long-distance migratory bird. Ecology. 94:221-230.
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2013.
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2014.
An evaluation of the fixed concentration procedure for assessment of acute inhalation toxicity. Regulatory Toxicology and Pharmacology. 94:22-32.
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2018.
The grain Hardness locus characterized in a diverse wheat panel (Triticum aestivum L.) adapted to the central part of the Fertile Crescent: genetic diversity, haplotype structure, and phylogeny. Molecular Genetics and Genomics. 291:1259-1275.
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2016.
Explaining people's perceptions of invasive alien species - A conceptual framework. Journal of Environmental Management. 229:10-26.
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2019.
Evaluating fugacity models for trace components in landfill gas. Environmental Pollution. 144:1013-1023.
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2006.
Importance of fungi in a 63 years old long-term field experiment with 20 years of maize growth. European Journal of Soil Biology. 102:ArticleNo.103264.
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2021.
High resolution mapping of Dense spike-ar (dsp.ar) to the genetic centromere of barley chromosome 7H. Theoretical and Applied Genetics. 124:373-384.
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2011.
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2017.
The nature, origin and significance of luminescent layers in the Bazhenov Shale formation of west Siberia, Russia. Marine and Petroleum Geology. 100:358-375.
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2019.
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2019.
Enhanced resistance and neutralization of defense responses by suppressors of RNA silencing. Virus Research. 130:103-109. Abstract
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2007.
Nature-based interventions for improving health and wellbeing: the purpose, the people and the outcomes. Sports. 7:ArticleNo.141.
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2019.
The effects of sheep faeces on soil solution composition. Plant and Soil. 285(1-2):135-148.
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2006.
Selenium concentrations in national inventory soils from Scotland and Sweden and their relationships with geochemical factors. Journal of Geochemical Exploration. 121:4-14.
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2012.
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2017.
Determination of N-species in soil extracts using microplate techniques. Talanta. 74:648-654.
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2008.
Downward migration of radiocaesium in organic soils across a transect in Scotland. Journal of Environmental Radioactivity. 115:124-133.
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2013.
Portable X-ray fluorescence analysis of mineral and organic soils and the influence of organic matter. Journal of Geochemical Exploration. 143:31-42.
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2014.
Aqua regia extractable selenium contents of some Scottish topsoils measured by ICP-MS and the relationship with mineral and organic components. Journal of the Science of Food and Agriculture. 90(6):972-980.
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2010.
Linkage disequilibrium and evaluation of genome-wide association mapping models in tetraploid potato. G3: Genes, Genomes, Genetics, 8.. 8
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2018.
Construction of reference chromosome-scale Pseudomolecules for potato: integrating the potato genome with genetic and physical maps. G3-Genomes Genomes Genetics. 3:2031-2047.
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2013.
Genome-wide association of yield traits in a nested association mapping population of barley reveals new gene diversity for future breeding. Authors. Journal of Experimental Botany. 69:3811-3822.
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2018.
Molecular regulation of somatic embryogenesis in potato: an auxin led perspective. Plant Molecular Biology. 68:185-201. Abstract
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2008.
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2007.
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2008.
Auxin pulse treatment holds the potential to enhance efficiency and practicability of somatic embryogenesis in potato. Plant Cell Reports. 26:945-950. Abstract
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2007.
Linkage disequilibrium and evaluation of genome-wide association mapping models in tetraploid potato. G3: Genes, Genomes, Genetics, 8.. 8:3185-3202.
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2018.
High prevalence of paratuberculosis in rabbits is associated with difficulties in controlling the disease in cattle. Veterinary Journal. 198:267-270.
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2013.
Nucleoli: Composition, function and dynamics (Review). Plant Physiology. 158:44-51.
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2012.
Helium: visualization of large scale plant pedigrees. BMC Bioinformatics. 15
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2014.
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2019.
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2017.
Regeneration of Salix arbuscula and Salix lapponum within a large mammal exclosure: the impacts of microsite and herbivory. Restoration Ecology. 18(Suppl. 1):1-9.
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2010.
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2014.
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2010.
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2010.
Microsite affects willow sapling recovery from bank vole (Myodes glareolus) herbivory, but does not affect grazing risk. Annals of Botany. 112:731-739.
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2013.
Spatiotemporal assessment and valuation of provisioning ecosystem services of Pakistan. Applied Ecology and Environmental Research. 17:6735-6759.
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2019.
Modifying glycoalkaloid content in transgenic potato - Metabolome impacts. Food Chemistry. 187:437-443.
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2015.
Potato metabolomics by GC-MS: what are the limiting factors? Metabolomics. 3:475-488. Abstract
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2007.
Variation in acrylamide producing potential in potato: Segregation of the trait in a breeding population. Food Chemistry. 123:568-573.
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2010.
Impacts on the metabolome of down-regulating polyphenol oxidase in potato tubers. Transgenic Research. 24:447-461.
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2015.
Metabolomic analysis of the potato tuber life cycle. Metabolomics. 6:274-291.
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2010.
Metabolomics: a second-generation platform for crop and food analysis. Bioanalysis. 3:1143-1159.
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2011.
The effects of stress on plant epicuticular waxes. New Phytologist. 171:469-499. Abstract
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2006.
Impact of light-exposure on the metabolite balance of transgenic potato tubers with modified glycoalkaloid biosynthesis. Food Chemistry. 200:263-273.
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2016.
Effect of agricultural production systems on the potato metabolome. Metabolomics. 10:212-224.
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2014.
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2006.
Living with dementia in rural and remote Scotland: Diverse experiences of people with dementia and their carers. Journal of Rural Studies. 22:161-176.
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2006.