Publications list
Filters: First Letter Of Last Name is T [Clear All Filters]
A slow-cooling-rate in situ cell for long-duration studies of mineral precipitation in cold aqueous environments on earth and other planetary bodies. Journal of Applied Crystallography. 51:1197-1210.
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2018.
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2012.
Singlet oxygen quenching by phenylamides and their parent compounds. Zeischrift f. 62c:833-838.
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2007.
Single seed descent as a breeding method for swedes (Brassica napus L. var. napobrassica Peterm). Euphytica. 169:387-401.
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2009.
Single amino acid substitution in the tobacco mosaic virus ORF6 protein suppresses formation of complex with eEF1A and cooperative nucleic acids binding in vitro. Doklady Biochemistry and Biophysics. 448:1-4.
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2013.
Simultaneous down-regulation of enzymes in the phenylpropanoid pathway of plants has aggregated effects on rhizosphere microbial communities. Biology and Fertility of Soils. 50:455-463.
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2014.
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2011.
Significant difference in pathogencity between MAT1-1 and MAT1-2 isolates in the wheat pathogen Mycosphaerella graminicola.. Fungal Genetics and Biology. 44:339-346. Abstract
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2007.
Signatures of adaptation to a monocot host in the plant-parasitic cyst nematode Heterodera sacchari. Plant Journal. 103:1263-1274.
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2020.
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2017.
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2008.
Shifts in the microbial community structure explain the response of soil respiration to land-use but not to climate warming. Soil Biology and Biochemistry. 89:123-134.
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2015.
Shifts in the metabolic function of benthic estuarine microbial community following a single pulse exposure to silver nanoparticles. Environmental Pollution. 201:91-99.
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2015.
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2016.
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2018.
Seroprevalence of respiratory viral pathogens of indigenous calves in Western Kenya. Research in Veterinary Science. 108:120-124.
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2016.
Serengeti wildebeest migratory patterns modelled from rainfall and new vegetation growth. Ecology. 87(8):1987-1994.
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2006.
Sequencing the potato genome: Outline and first results to come from the elucidation of the sequence of the world's most important food crop. American Journal of Potato Research. 86:417-429.
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2009.
A sequence-ready physical map of barley anchored genetically by two million single-nucleotide polymorphisms. Plant Physiology. 164:412-423.
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2014.
Sequence analysis of the potato aphid Macrosiphum euphorbiae transcriptome identified two new viruses. PLoS ONE. 13:ArticleNo.e0193239.
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2018.
Sensitivity to assumptions in models of generalist predation on a cyclic prey. Ecology. 88(10):2576-2586.
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2007.
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2011.
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2010.
Selective breeding for susceptibility to myopia reveals a gene-environment interaction. Investigative Ophthalmology and Visual Science. 52:4003-4011.
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2011.
Selection footprints in barley breeding lines detected by combining genotyping-by-sequencing with reference genome information. Molecular Breeding. 35:Article11.
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2015.
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2016.
Seaweed fertilisation impacts the chemical and isotopic composition of barley: Implications for analyses of archaeological skeletal remains. Journal of Archaeological Science. 104:34-44.
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2019.
Seasonal regulation of petal number. Plant Physiology. 175:886-903.
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2017.
Seasonal nitrous oxide emissions in field soils under soil management of reduced tillage, compost application or organic farming. Agriculture, Ecosystems and Environment. 189:17-180.
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2014.
Seasonal dynamics of the soil microbial community: assimilation of old and young carbon sources in a long-term field experiment as revealed by natural C-13 abundance. European Journal of Soil Science. 67:79-89.
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2016.
Seasonal controls on DOC dynamics in nested upland catchments in NE Scotland. Hydrological Processes. 25:1647-1658.
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2011.
Searching for the origins of bere barley: a geometric morphometric approach to cereal landrace recognition in archaeology. Journal of Archaeological Method and Theory. 26:1125-1142.
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2019.
Scottish farmers' intentions to afforest land in the context of farm diversification. Forest Policy and Economics. 78:122-132.
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2017.
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2017.
Scaling up and out in runoff process understanding - insights from nested experimental catchment studies. Hydrological Processes - HP Today. 20:2461-2465.
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2006.
Sampling bias misrepresents the biogeographical significance of constitutive mixotrophs across global oceans. Global Ecology and Biogeography. 28:418-428.
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2019.
Sample collection protocol effects on quantification of gene expression in potato leaf tissue. Plant Molecular Biology Reporter. 29:369-378.
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2011.
Safety testing of GM-rice expressing PHA-E lectin using a new animal test design. Food and Chemical Toxicology. 45:364-377. Abstract
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2007.
Safeguarding freshwater life beyond 2020: Recommendations for the new global biodiversity framework from the European experience. Conservation Letters. Published online..
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2020.
Safeguarding freshwater life beyond 2020: Recommendations for the new global biodiversity framework from the European experience. Conservation Letters. 14:ArticleNo.e12771.
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2021.
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2012.
The SAFE FOODS framework for improved risk analysis of foods. Food Control. 21:1566-1587.
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2010.
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2016.
RXLR effector AVR2 up-regulates a brassinosteroid responsive bHLH transcription factor to suppress immunity. Plant Physiology. 174:356-369.
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2017.
Runoff processes, stream water residence times and controlling landscape characteristics in a mesoscale catchment: an initial evaluation. Journal of Hydrology. 325(1-4):197-221.
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2006.
The rsmS (ybaM) mutation causes bypass suppression of the RsmAB post-transcriptional virulence regulation system in enterobacterial phytopathogens. Scientific Reports. 9:ArticleNo.4525.
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2019.
Routes to genetic gain in potato. Nature Plants. 4:631-632.
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2018.
Rotting softly and stealthily. Current Opinion in Plant Biology. 8:424-429.
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2005.
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2021.
Root-soil friction: quantification provides evidence for measurable benefits for manipulation of root-tip traits. Plant Cell and Environment. 36:1085-1092.
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2013.
Root-shoot growth responses during interspecific competition quantified using allometric modelling. Annals of Botany. 106(6):921-926.
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2010.
Root system architecture: opportunities and constraints for genetic improvement of crops. Trends in Plant Science. 12:474-481. Abstract
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2007.
Root phenomics of crops - opportunities and challenges. Functional Plant Biology. 36:922-929.
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2009.
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2016.
Root hair mutations displace the barley rhizosphere microbiota. Frontiers in Plant Science.. 8:ArticleNo.1094.
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2017.
The role of the potato (Solanum tuberosum L.) CCD8 gene in stolon and tuber development. New Phytologist. 198:1108-1120.
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2013.
Role of the methionine cycle in the temperature-sensitive responses of potato plants to potato virus Y. Molecular Plant Pathology. 22:77-91.
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2021.
The role of secretion systems and small molecules in soft-rot enterobacteriaceae pathogenicity. Annual Review of Phytopathology. 50:425-449.
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2012.
The role of mixotrophic protists in the biological carbon pump. Biogeosciences. 11:995-1005.
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2014.
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2007.
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2006.
The role of effectors in non host resistance to filamentous plant pathogens. Frontiers in Plant Science. 5
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2014.
The role of ecosystems and their management in regulating climate, and soil, water and air quality. Journal of Applied Ecology. 50:812-829.
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2013.
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2011.
RNAi-suppression of barley caffeic acid O-methyltransferase modifies lignin despite redundancy in the gene family. Plant Biotechnology Journal.. 17:594-607.
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2019.
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2019.
RNA-based technologies for engineering plant virus resistance. Plants. 10:ArticleNo.82.
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2021.
RNA sequence analysis of diseased groundnut (Arachis hypogaea) reveals the full genome of groundnut rosette assistor virus (GRAV). Virus Research. 277:ArticleNo.197837.
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2020.
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2012.
River macrophyte indices: not the Holy Grail!. Freshwater Biology. 57:1745-1759.
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2012.
A risk-based approach for developing standards for irrigation with reclaimed water. Water Research. 126:372-384.
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2017.
The risk of peat erosion from climate change: land management combinations: an assessment with bayesian belief networks. Human and Ecological Risk Assessment. 16(5):962-976.
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2010.
Risk of erosion in peat soils - an investigation using Bayesian belief networks. Soil Use and Management. 27:538-549.
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2011.
Risk assessments for quality-assured, source-segregated composts and anaerobic digestates for a circular bioeconomy in the UK. Environment International. 127:253-266.
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2019.
Risk assessment of the use of PAS100 green composts in sheep and cattle production in Scotland. Waste Management. 32:117-130.
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2012.
Rice responses to soil management in rice-based cropping system in the semi-arid tropics of southern Lombok, Eastern Indonesia. Field Crops Research. 110:197-206. Abstract
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2009.
Rhynchosporium leaf scald disease incidence: seed source and spatial pattern. Plant Pathology. 68:1179-1187.
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2019.
Rhizodeposition shapes rhizosphere microbial community structure in organic soil. New Phytologist. 173(3):600-610.
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2007.
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2012.
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2013.
A review of the role of excess soil moisture conditions in constraining farm practices under Atlantic conditions. Soil Use and Management. 28:580-589.
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2012.
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2018.
The resurgence of haploids in higher plants. Trends in Plant Science. 12:368-375. Abstract
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2007.
Responses of plant traits of four grasses from contrasting habitats to defoliation and N supply. Nutrient Cycling in Agroecosystems. 88(2):245-258.
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2010.
Response to Kruse-Plass et al. (2017) regarding the risk to non-target lepidopteran larvae exposed to pollen from one or more of three Bt maize events (MON810, Bt11 and 1507). Environmental Sciences Europe. 29:ArticleNo.21.
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2017.
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2015.
Response of methanotrophic communities to afforestation and reforestation in New Zealand. ISME Journal. 5:1832-1836.
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2011.
Response of ectomycorrhizal extramatrical mycelium production and isotopic composition to in-growth bag size and soil fauna. Soil Biology and Biochemistry. 66:154-162.
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2013.
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2012.
Resource quality affects carbon cycling in deep-sea sediments. ISME Journal. 6:1740-1748.
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2012.
Resistance to Rhynchosporium commune in a collection of European spring barley germplasm. Theoretical and Applied Genetics. 131:2513-2528.
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2018.
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2021.
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2008.
Resilience of microorganisms and aggregation of a sandy calcareous soil to amendment with organic and synthetic fertilizer. Soil Use and Management. 26:149-157.
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2010.
Reservoir sedimentation and its mitigating strategies: a case study of Angereb reservoir (NW Ethiopia). Journal of Soil and Sediments. 12:291-305.
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2012.
Reproducibility of species lists, visual cover estimates and frequency methods for recording high-mountain vegetation. Journal of Vegetation Science. 21:1035-1047.
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2010.
Reproducibility of species lists, visual cover estimates and frequency methods for recording high-mountain vegetation. Journal of Vegetation Science. 21:1035-1047.
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2010.
Representation of decision-making in European agricultural agent-based models. Agricultural Systems. 167:143-160.
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2018.
Reply to comment on: Vegetation burning for game management in the UK uplands is increasing and overlaps spatially with soil carbon and protected areas. Biological Conservation. 195:295-296.
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2016.
Replication and trafficking of a plant virus are coupled at the entrances of plasmodesmata. Journal of Cell Biology. 201:981-995.
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2013.
Replacement of amino acid in the ORF6 protein of tobacco mosaic virus prevents the formation of a complex with eEF1A and the cooperative binding to nucleic acids in vitro. Proceedings of the Russian Academy of Sciences. 448:1-5.
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2013.
REMA: A computer-based mapping tool for analysis of restriction sites in multiple DNA sequences. Journal of Microbiological Methods. 69(2):411-413.
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2007.
Relative importance of local- and large-scale drivers of alpine soil microarthropod communities. Oecologia. 182:913-924.
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2016.
Relationships between volatile and non-volatile metabolites and attributes of processed potato flavour. Phytochemistry. 71:1765-1773.
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2010.
The relationship between soil water storage capacity and plant species diversity in high alpine vegetation. Plant Ecology and Diversity. 6:457-466.
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2013.
Rejoinder to Comments on Minasny et al., 2017 Soil carbon 4 per mille. Geoderma, 292, 59-86. Geoderma. 309:124-129.
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2018.
Regulon studies and in planta role of the BraI/R quorum-sensing system in the plant-beneficial Burkholderia cluster. Applied and Environmental Microbiology. 79:4421-4432.
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2013.
Regional-scale alteration of clear-cut forest regeneration caused by moose browsing. Forest Ecology and Management. 289:289-299.
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2013.
Regional scale gradients of climate and nitrogen deposition drive variation in ectomycorrhizal fungal communities associated with native Scots pine. Global Change Biology. 19:1688-1696.
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2013.
Reforming the CAP - with area-based Pillar 1 payments, who wins and who loses? Land Use Policy. 31:209-222.
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2013.
Recovering phosphorus from soil - A root solution? Environmental Science and Technology. 46:1977-1978.
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2012.
The receptor-like kinase SlSERK1 is required for Mi-1-mediated resistance to potato aphids in tomato. Plant Journal. 67:459-471.
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2011.
Recent trends in water quality in an agricultural catchment in Eastern Scotland: elucidating the roles of hydrology and land use. Environmental Science: Processes and Impacts. 16:1659-1675.
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2014.
Recent developments in effector biology of filamentous plant pathogens. Cellular Microbiology. 12:705-715.
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2010.
Recent changes in the distribution of carboxylesterase genes and associated chromosomal rearrangements in Greek populations of the tobacco aphid Myzus persicae nicotianae. Biological Journal of the Linnean Society. 113:455-470.
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2014.
Rapid defense responses in maize leaves induced by Spodoptera exigua caterpillar feeding. Journal of Experimental Botany. 68:4709-4723.
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2017.
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2018.
Rapid and dynamic alternative splicing impacts the arabidopsis cold response transcriptome. Plant Cell. 30:1424-1444.
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2018.
Ranking the value of germplasm: new oil palm (Elaeis guineensis) breeding stocks as a case study. Annals of Applied Biology. 160:145-156.
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2012.
Random mutagenesis screen shows that Phytophthora capsici CRN83_152-mediated cell death is not required for its virulence function(s). Molecular Plant Pathology. 19:1114-1126.
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2018.
Rainfall and temperature effects on fruit body production by stipitate hydnoid fungi in Inverey Wood, Scotland. Fungal Ecology. 27:137-140.
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2017.
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2008.
Quantitative trait loci for agronomic traits in an elite barley population for Mediterranean conditions. Molecular Breeding. 33:249-265.
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2013.
Quantitative trait loci and candidate loci for heading date in a large population of a wide barley cross. Crop Science. 52:2469-2480.
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2012.
Quantitative analysis of the tomato nuclear proteome during Phytophthora capsici infection unveils regulators of immunity. New Phytologist. 215:309-322.
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2017.
Quantifying terrestrial carbon stocks: examining the spatial variation in two upland areas in the UK and a comparison to mapped estimates of soil carbon. Soil Use and Management. 25(3):320-332.
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2009.
Quantifying preferences for the natural world using monetary and non-monetary assessments of value. Conservation Biology. 28:404-413.
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2014.
Quantifying hydrological budgets and pathways in a small upland catchment using a combined modelling and tracer approach. Hydrological Processes. 20:349-368.
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2006.
Quantification of effects of season and nitrogen supply on tree belowground carbon transfer. New Phytologist. 187(2):485-493.
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2010.
A qualitative multi-attribute model for assessing the impact of cropping systems on soil quality. Pedobiologia. 51:239-250. Abstract
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2007.
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2014.
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2016.
Psoroptes ovis-Early Immunoreactive Protein (Pso-EIP-1) a novel diagnostic antigen for sheep scab. Parasite Immunology, Article No. e12788. Published online..
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2020.
The pseudogenes of barley. The Plant Journal. 93:502-514.
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2018.
The pseudogenes of barley. Plant Journal. 93:502-514.
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2018.
A proteomic and targeted metabolomic approach to investigate change in Lolium perenne roots when challenged with glycine. Journal of Experimental Botany. 58(7):1581-1590.
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2007.
Prospects for plant defence activatiors and biocontrol in IPM - concpets and lessons learnt so far. Crop Protection. 97:128-134.
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2017.
A proposal for classification of non-urban regions in the European Union. Cuadernos Geograficos. 55:92-124.
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2016.
Promoting microbial immobilization of soil nitrogen during restoration of abandoned agricultural fields by organic additions. Biology and Fertility of Soils. 43:823-828.
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2007.
Progress in model-to-model analysis. Journal of Artificial Societies and Social Simulation. 11(2):8.
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2008.
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2009.
Profiling of phenols in human faecal water after raspberry supplementation. Journal of Agricultural and Food Chemistry. 58:10389-10395.
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2010.
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2014.
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2020.
Production and properties of monoclonal antibodies to Solanum nodiflorum mottle sobemovirus. Annals of Applied Biology. 146:321-325. Abstract
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2005.
Product stability and sequestration mechanisms in Solanum tuberosum engineered to biosynthesize high value ketocarotenoids. Plant Biotechnology Journal. 14:140-152.
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2016.
Processing of 13C-labelled diatoms by a bathyal community at sub-zero temperatures. Marine Ecology Progress Series. 421:39-50.
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2011.
Probabilistic modelling of the inherent fieldlevel pesticide pollution risk in a small drinking water catchment using spatial Bayesian belief networks. Hydrology and Earth Systems Science. 26:1261-1293.
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2022.
Prevalence and survival of potential pathogens in source segregated green waste compost. Science of the Total Environment. 431:128-138.
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2012.
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2011.
Preparing interdisciplinary leadership for a sustainable future. Sustainability Science..
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2020.
Preharvest application of exogenous abscisic acid (ABA) or an ABA analogue does not affect endogenous ABA concentration of onion bulbs. Plant Growth Regulation. 52:117-129. Abstract
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2007.
Preferences for coastal and marine conservation in Vietnam: accounting for differences in individual choice set formation. Ecological Economics. 180:ArticleNo.106885.
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2021.
Prediction of soil characteristics and colour using data from the National Soils Inventory of Scotland. Geoderma. 200-201:99-107.
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2013.
Predicting the severity of the grass pollen season and the effect of climate change in Northwest Europe. Science Advances. 7:ArticleNo.eabd7658.
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2021.
Predicting the effects of body fatness on food intake and performance of sheep. British Journal of Nutrition. 97(6):1206-1215.
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2007.
Predicting soil chemical composition and other soil parameters from field observations using a neural network. Computers and Electronics in Agriculture. 82:108-116.
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2012.
Predicting dates of head initiation and yields of broccoli crops grown throughout Scotland. European Journal of Agronomy. 116:ArticleNo.126055..
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2020.
Predicting a change in the order of spring phenology in temperate forests. Global Change Biology. 21:2603-2611.
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2015.
Preceding crop and weed management history affect denitrification and denitrifier community structure throughout the development of durum wheat. Agriculture, Ecosystems and Environment. 212:49-63.
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2015.
A pragmatic methodology for horizon scanning of water quality linked to future climate and land use scenarios. Land Use Policy. 44:131-144.
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2015.
Potential of multi-objective models for risk-based mapping of the resilience characteristics of soils: demonstration at a national level. Soil Use and Management. 25:66-77.
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2009.
Potential of multi-objective models for risk-based mapping of the resilience characteristics of soils: demonstration at a national level. Soil Use and Management. 25(1):66-77.
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2008.
The potential of chlorhexidine lavage to reduce the shedding of VTEC 0157 from cattle. Cattle Practice. 22:280-280.
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2014.
Potential for pathogen reduction in anaerobic digestion and biogas generation in Sub-Saharan Africa. Biomass and Bioenergy. 70:112-124.
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2014.
Potential environment and public health risk due to contamination of heavy metals from industrial waste water in Lam Thao, Phu Tho, Vietnam. American Journal of Environmental Sciences. 8:71-78.
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2012.
Potato virus Y HCPro localization at distinct, dynamically related and environment-influenced structures in the cell cytoplasm. Molecular Plant-Microbe Interactions. 27:1331-1343.
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2014.
Potato tuber pectin structure is influenced by pectin methyl esterase activity and impacts on cooked potato texture. Journal of Experimental Botany. 62:371-381.
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2011.
Potato NPH3/RPT2-like protein StNRL1, targeted by a phytophthora infestans RXLR effector, is a susceptibility factor. Plant Physiology. 171:645-657.
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2016.
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2012.
Potato mop-top virus co-opts the stress sensor HIPP26 for long-distance movement. Plant Physiology. 176:2052-2070.
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2018.
The potato MAP3K StVIK is required for Phytophthora infestans RXLR effector Pi17316 to promote disease. Plant Physiology. 177:398-410.
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2018.
Potato late blight field resistance from QTL dPI09c is conferred by the NB-LRR gene R8. Journal of Experimental Botany. 69:1545-1555.
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2018.
Population structure of Phytophthora infestans collected on potato and tomato in Italy. Plant Pathology. Published online..
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2021.
Population resequencing reveals local adaptation of Arabidopsis lyrata to serpentine soils. Nature Genetics. 42:260-U42.
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2010.
Population and individual level effects of over-winter supplementary feeding mountain hares. Journal of Zoology. 282(3):214-220.
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2010.
Polyphenols journey through blood-brain barrier towards neuronal protection. Scientific Reports. 7:ArticleNo.11456.
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2017.
Polyphenol and vitamin C content in European commercial blackcurrant juice products. Food Chemistry. 127:1216-1223.
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2011.
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2017.
Pollinator-flower interactions in gardens during the COVID19 pandemic lockdown of 2020. Journal of Pollination Ecology.
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2022.
Pollinator monitoring more than pays for itself. Journal of Applied Ecology. 58:44-57.
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2021.
Policy instruments for environmental public goods: interdependencies and hybridity. Land Use Policy. 104:ArticleNo.104709.
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2021.
Plasmodesmata viewed as specialised membrane adhesion sites. Protoplasma. 248:39-60.
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2011.
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2010.
A plant virus movement protein forms ringlike complexes with the major nucleolar protein, fibrillarin, in vitro. Journal of Molecular Biology. 376:932-937. Abstract
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2008.
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2013.
Plant phytaspases and animal caspases: structurally unrelated death proteases with a common role and specificity. Physiologia Plantarum. 145:77-84.
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2012.
The plant microbiome. Genome Biology. 14:209.
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2013.
Plant immunity in plant-aphid interactions. Frontiers in Plant Science. 5
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2014.
A plant growth-promoting symbiosis between Mycena galopus and Vaccinium corymbosum seedlings. Mycorrhiza. 27:831-839.
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2017.
Plant functional connectivity - integrating landscape structure and effective dispersal. Journal of Ecology. 105:1648-1656.
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2017.
Plant ecology's guilty little secret: understanding the dynamics of plant competition. Functional Ecology. 27:918-929.
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2013.
Plant coilin: structural characteristics and RNA-binding properties. PLoS ONE. 8:e53571.
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2013.
A plant chitinase controls cortical infection thread progression and nitrogen-fixing symbiosis. ELIFE. 7:ArticleNo.e38874.
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2018.
The plant cell wall: a complex and dynamic structure as revealed by the responses of genes under stress conditions. Frontiers in Plant Science. 7
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2016.
A plant alternative to animal caspases: subtilisin-like proteases. Cell Death and Differentiation. 18:1289-1297.
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2011.
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2006.
Phytophthora infestans RXLR effectors target parallel steps in an immune signal transduction pathway. Plant Physiology. 180:2227-2239.
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2019.
Phytophthora infestans RXLR effectors act in concert at diverse subcellular localisations to enhance host colonisation. Journal of Experimental Botany. 70:343-356.
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2019.
A Phytophthora infestans RXLR effector targets plant PP1c isoforms that promote late blight disease. Nature Communications. 7
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2016.