Publications list
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Cohort variation in individual body mass dissipates with age in large herbivores. Ecological Monographs. 86:517-543.
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2016.
Cohort variation in individual body mass dissipates with age in large herbivores. Ecological Monographs. 86:517-543.
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2016.
A comparative nitrogen balance and productivity analysis of legume and non-legume supported cropping systems: the potential role of biological nitrogen fixation. Frontiers in Plant Science. 7:ArticleNo.1700..
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2016.
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2016.
Contrasting effects of summer and winter warming on body mass explain population dynamics in a food-limited Arctic herbivore. Global Change Biology. Published online..
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2016.
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2016.
Crystal structure of the SPOC domain of the arabidopsis flowering regulator FPA. PLoS ONE. 11:ArticleNo.e0160694.
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2016.
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2016.
Development of a sensitive method to extract and detect low numbers of Cryptosporidium oocysts from adult cattle faecal samples. Veterinary Parasitology. 227:26-29.
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2016.
Do we care about sustainability? An analysis of time sensitivity of social preferences under environmental time-persistent effects Journal of Environmental Management. 117:356-364.
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2016.
The dynamics of transcript abundance during cellularization of developing barley endosperm. Plant Physiology. 170:1549-1565.
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2016.
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2016.
Environmental and gentic factors associated with solanesol accumulation in potato leaves. Frontiers in Plant Science. 7
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2016.
Estimating agro-ecosystem carbon balance of northern Japan, and comparing the change in carbon stock by soil inventory and net biome productivity. Science of the Total Environment. 554:293-302.
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2016.
Evaluating the precision of eight spatial sampling schemes in estimating regional means of simulated yield for two crops. Environmental Modelling and Software. 80:100-112.
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2016.
Evaluating the process of ecological restoration. Restoration Ecology. 21:ArticleNo.41..
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2016.
Evaluating the process of ecological restoration. Ecology and Society. 21:ArticleNo.41..
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2016.
Evaluation of spot and passive sampling for monitoring, flux estimation and risk assessment of pesticides within the constraints of a typical regulatory monitoring scheme. Science of the Total Environment. 569-570:1369-1379.
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2016.
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2016.
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2016.
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2016.
Genomic selection in multi-environment crop trials. G3- Genes Genomes Genetics. 6:1313-1326.
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2016.
Genomics and taxonomy in diagnostics for food security: soft-rotting enterobacterial plant pathogens. Analytical Methods. 8:12-24.
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2016.
Global environmental change: local perceptions, understandings, and explanations. Ecology and Society. 21:ArticleNo.25.
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2016.
High-throughput metabolic screening of microalgae genetic variation in response to nutrient limitation. Metabolomics. 12:ArticleNo.9.
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2016.
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2016.
A homolog of Blade-On-Petiole 1 and 2 (BOP1/2) controls internode length and homeotic changes of the barley inflorescence. Plant Physiology. 171:1113-1127.
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2016.
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2016.
Impact of warming on CO2 emissions from streams countered by aquatic photosynthesis. Nature Geoscience. 9:758-761.
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2016.
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2016.
Legumes are different: Leaf nitrogen, photosynthesis, and water use efficiency. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 113:4098-4103.
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2016.
Long-term impacts of nitrogen deposition on coastal plant communities. Environmental Pollution. 221:337-347.
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2016.
Long-term macronutrient stoichiometry of UK ombrotrophic peatlands. Science of the Total Environment. 572:1561-1572.
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2016.
Measurement and analysis of household carbon: the case of a UK city. Applied Energy. 164:871-881.
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2016.
Mitigating stress and supporting health in deprived urban communities: the importance of green space and the social environment. International Journal of Environmental Research and Public Health. 13:ArticleNo.440.
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2016.
Mobility and toxicity of heavy metal(loid)s arising from contaminated wood ash application to a pasture grassland soil. Environmental Pollution. 218:419-427.
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2016.
Multi locus sequence analysis and symbiotic characterization of novel Ensifer strains nodulating Tephrosia spp. In the Indian Thar Desert. Systematic and Applied Microbiology. 39:534-545.
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2016.
Multi-wheat-model ensemble responses to interannual climate variability. Environmental Modelling and Software. 81:86-101.
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2016.
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2016.
No evidence for extensive horizontal gene transfer in the genome of the tardigrade Hypsibius dujardini. Proceedings of the National Academy of Sciences of the United States of America. 1135053
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2016.
Oomycetes seek help from the plant: Phytophthora infestans effectors target host susceptibility factors. Molecular Plant. 9:636-638.
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2016.
Organic matter chemistry controls greenhouse gas emissions from permafrost peatlands. Soil Biology and Biochemistry. 98:42-53.
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2016.
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2016.
Phosphorus in soils and plants - facing phosphorus scarcity. Plant and Soil. 401:1-6.
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2016.
A Phytophthora infestans RXLR effector targets plant PP1c isoforms that promote late blight disease. Nature Communications. 7
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2016.
The plant cell wall: a complex and dynamic structure as revealed by the responses of genes under stress conditions. Frontiers in Plant Science. 7
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2016.
Potato NPH3/RPT2-like protein StNRL1, targeted by a phytophthora infestans RXLR effector, is a susceptibility factor. Plant Physiology. 171:645-657.
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2016.
Product stability and sequestration mechanisms in Solanum tuberosum engineered to biosynthesize high value ketocarotenoids. Plant Biotechnology Journal. 14:140-152.
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2016.
A proposal for classification of non-urban regions in the European Union. Cuadernos Geograficos. 55:92-124.
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2016.
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2016.
Relative importance of local- and large-scale drivers of alpine soil microarthropod communities. Oecologia. 182:913-924.
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2016.
Reply to comment on: Vegetation burning for game management in the UK uplands is increasing and overlaps spatially with soil carbon and protected areas. Biological Conservation. 195:295-296.
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2016.
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2016.
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2016.
Seasonal dynamics of the soil microbial community: assimilation of old and young carbon sources in a long-term field experiment as revealed by natural C-13 abundance. European Journal of Soil Science. 67:79-89.
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2016.
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2016.
Seroprevalence of respiratory viral pathogens of indigenous calves in Western Kenya. Research in Veterinary Science. 108:120-124.
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2016.
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2016.
Spatial analysis of blackleg-affected seed potato crops in Scotland. Plant Pathology. 65:570-576.
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2016.
Staying tight: Plasmodesmal membrane contact sites and the control of cell-to-cell connectivity in plants. Annual Review of Plant Biology.
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2016.
Staying tight: Plasmodesmal membrane contact sites and the control of cell-to-cell connectivity in plants. Annual Review of Plant Biology. 67:337-364.
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2016.
Stitching organelles: organization and function of specialized membrane contact sites in plants. Trends in Cell Biology. 26:705-717.
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2016.
Synergies and trade-offs between ecosystem services in an alpine ecosystem grazed by sheep - an experimental approach. Basic and Applied Ecology. 17:596-608.
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2016.
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2016.
Uncertainty of wheat water use: Simulated patterns and sensitivity to temperature and CO2. Field Crops Research. 198:80-92.
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2016.
Using nematode communities to test a European scale soil biological monitoring programme for policy development. Applied Soil Ecology. 97:78-85.
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2016.
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2016.
(Poly)phenols protect from alpha-synuclein toxicity by reducing oxidative stress and promoting autophagy. Human Molecular Genetics. 24:1717-1732.
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2015.
Adding ‘iterativity’ to the credibility, relevance, legitimacy: A novel scheme to highlight dynamic aspects of science-policy interfaces. Environmental Science and Policy. 54:505-512.
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2015.
Aged riverine particulate organic carbon in four UK catchments. Science of the Total Environment. 536:648-654.
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2015.
Agro-meteorological indices and climate model uncertainty over the UK. Climatic Change. 128:113-126.
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2015.
Ancient and novel small RNA pathways compensate for the loss of piRNAs in multiple independent nematode lineages. PLoS Biology. 13:e1002061.
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2015.
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2015.
Associational relationships at multiple spatial scales affect forest damage by moose. Forest Ecology and Management. 348:97-107.
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2015.
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2015.
Barley: a translational model for adaptation to climate change. New Phytologist. 206:913-931.
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2015.
Bayesian-multiplicative treatment of count zeros in compositional data sets. Central European Journal of Biology. 15:134-158.
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2015.
C-13 PLFAs: a key to open the soil microbial black box? Plant and Soil. 392:3-15.
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2015.
Caesium inhibits the colonization of Medicago truncatula by arbuscular mycorrhizal fungi. Journal of Environmental Radioactivity. 141:57-61.
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2015.
Can Hymenoscyphus fraxineus infect hardy members of the Oleaceae other than ash species? Forest Pathology. 45:426-429.
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2015.
Conversion of lowland tropical forests to tree cash crop plantations loses up to one-half of stored soil organic carbon. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 112:9956-9960.
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2015.
Crop modelling for integrated assessment of risk to food production from climate change. Environmental Modelling and Software. 72:287-303.
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2015.
A cross-taxon analysis of the impact of climate change on abundance trends in central Europe. Biological Conservation. 187:41-50.
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2015.
Dependence of ombrotrophic peat nitrogen on phosphorus and climate. Biogeochemistry. 125:11-20.
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2015.
Distinct circular single-stranded DNA viruses exist in different soil types. Applied and Environmental Microbiology. 81:3934-3945.
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2015.
Distributions of carbon and nitrogen isotopes in Scotland's topsoil: a national-scale study. European Journal of Soil Science. 66:1002-1011.
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2015.
DNA-entropy reveals a significant difference in complexity between housekeeping and tissue specific gene promoters. Computational Biology and Chemistry. 58:19-24.
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2015.
Does decadal climate variation influence Wheat and Maize production in the southeast USA? Agricultural Forest Meteorology. 204:1-9.
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2015.
Drought-resistant cereals: impact on water sustainability and nutritional quality. Proceedings of the Nutrition Society. 74:191-197.
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2015.
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2015.
Effects of increased day and night temperature with supplemental infrared heating on winter wheat growth in North China. European Journal of Agronomy. 64:67-77.
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2015.
Enteropathogen survival in soil from different land-uses is predominantly regulated by microbial community composition. Applied Soil Ecology. 89:76-84.
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2015.
Epidemiology of Dickeya dianthicola and Dickeya solani in ornamental hosts and potato studied using variable number tandem repeat analysis. European Journal of Plant Pathology. 141:63-70.
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2015.
Evolution of the seed dispersal system in barley. Cell. 162:527-539.
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2015.
Gas transfer controls carbon limitation during biomass production by marine microalgae. Chemsuschem. 8:2727-2736.
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2015.
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2015.
A genetically modified tobacco mosaic virus that can produce gold nanoparticles from a metal salt precursor. Frontiers in Plant Science. 6
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2015.
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2015.
Global Research Alliance Modelling Platform (GRAMP): An open web platform for modelling greenhouse gas emissions from agro-ecosystems. Computers and Electronics in Agriculture. 111:112-120.
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2015.
Hydrocarbon contamination affects deep-sea benthic oxygen uptake and microbial community composition. Deep Sea Research Part 1 - Oceanographic Research Papers. 100:79-87.
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2015.
Identification of a fluorometabolite from Streptomyces sp MA37: (2R3S4S)-5-fluoro-2,3,4-trihydroxypentanoic acid. Chemical Science. 6:1414-1419.
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2015.
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2015.
Lichen response to ammonia deposition defines the footprint of a penguin rookery. Biogeochemistry. 122:295-311.
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2015.
Long-chain alcohols did not improve predictions of the composition of tall fescue and red clover mixtures over n-alkanes alone. Grass and Forage Science. 70:499-506.
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2015.
Mitigating arable soil compaction: A review and analysis of available cost and benefit data. Soil and Tillage Research. 146:10-25.
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2015.
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2015.
More plant growth but less plant defence? First global gene expression data for plants grown in soil amended with biochar Global Change Biology Bioenergy. 7:658-672.
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2015.
The MORPH-R web server and software tool for predicting missing genes in biological pathways. Physiologia Plantarum. 155:12-20.
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2015.
Multimodel ensembles of wheat growth: many models are better than one. Global Change Biology. 21:911-925.
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2015.
Network analyses reveal novel aspects of ALS pathogenesis. PLoS Genetics. 11:e1005107.
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2015.
Occurrence of priming in the degradation of lignocellulose in marine sediments. PLoS ONE. 10:e0143917.
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2015.
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Optimization of in vitro inhibition of HT-29 colon cancer cell cultures by Solanum tuberosum L. extracts. Food and Function. 6:72-83.
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2015.
Pantoea ananatis utilizes a type VI secretion system for pathogenesis and bacterial competition. Molecular Plant-Microbe Interactions. 28:420-431.
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2015.
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2015.
Participatory scenario-planning in place-based social-ecological research: insights and experiences from 23 case studies. Ecology and Society. 20:ArticleNo.34.
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2015.
Phylogenetic effects on shoot magnesium concentration. Crop and Pasture Science. 66:1241-1248.
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2015.
A pragmatic methodology for horizon scanning of water quality linked to future climate and land use scenarios. Land Use Policy. 44:131-144.
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2015.
Preceding crop and weed management history affect denitrification and denitrifier community structure throughout the development of durum wheat. Agriculture, Ecosystems and Environment. 212:49-63.
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2015.
Predicting a change in the order of spring phenology in temperate forests. Global Change Biology. 21:2603-2611.
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2015.
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2015.
Selection footprints in barley breeding lines detected by combining genotyping-by-sequencing with reference genome information. Molecular Breeding. 35:Article11.
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2015.
Shifts in the metabolic function of benthic estuarine microbial community following a single pulse exposure to silver nanoparticles. Environmental Pollution. 201:91-99.
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2015.
Shifts in the microbial community structure explain the response of soil respiration to land-use but not to climate warming. Soil Biology and Biochemistry. 89:123-134.
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2015.
Stream metabolism and the open diel oxygen method: principles, practice and perspectives. Limnology and Oceanography: Methods. 13:356-374.
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2015.
Strong altitudinal partitioning in the distributions of ectomycorrhizal fungi along a short (300 m) elevation gradient. New Phytologist. 206:1145-1155.
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2015.
Techniques for RNA in vivo imaging in plants. Journal of Microscopy. 258:1-5.
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2015.
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2015.
The top 10 oomycete pathogens in molecular plant pathology. Molecular Plant Pathology. 16:413-434.
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2015.
Trophy hunters' willingness to pay for wildlife conservation and community benefits. Conservation Biology. 29:1111-1121.
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2015.
U-box E3 ubiquitin ligase PUB17 acts in the nucleus to promote specific immune pathways triggered by Phytophthora infestans. Journal of Experimental Botany. 66:3189-3199.
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2015.
Vaccination of pigs with the S48 strain of Toxoplasma gondii - safer meat for human consumption. Veterinary Research. 46
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2015.
Variability of effects of spatial climate data aggregation on regional yield simulation by crop models. Climate Research. 65:53-69.
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2015.
Vegetation burning for game management in the UK uplands is increasing and overlaps spatially with soil carbon and protected areas. Biological Conservation. 191:243-250.
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2015.
Why genomics research on Pectobacterium and Dickeya makes a difference. American Journal of Potato Research. 92:218-222.
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2015.
Within-year changes in hydraulic properties of a shallow entisol in farmland and forestland. Vadose Zone Journal. 14
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2015.
Allelic variation at Fr-H1/Vrn-H1 and Fr-H2 loci is the main determinant of frost tolerance in spring barley. Environmental and Experimental Botany. 106:148-155.
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2014.
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2014.
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2014.
Assessing daily egestion rates in earthworms: using fungal spores as a natural soil marker to estimate gut transit time. Biology and Fertility of Soils. 50:179-183.
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2014.
Assessing the sustainability of renewable energy technologies using multi-criteria analysis: Suitability of approach for national-scale assessments and associated uncertainties. Renewable and Sustainable Energy Reviews. 39:1173-1184.
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2014.
Assessment of the use of sediment fences for control of erosion and sediment phosphorus loss after potato harvesting on sloping land. Science of the Total Environment. 468-469:1234-1244.
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2014.
Atmospheric deposition of phosphorus to land and freshwater. Environmental Science: Processes and Impacts. 16:1608-1617.
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2014.
Barley has two peroxisomal ABC transporters with multiple functions in beta-oxidation. Journal of Experimental Botany. 65:4833-4847.
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2014.
Bayesian-multiplicative treatment of count zeros in compositional data sets. Central European Journal of Biology. 15:134-158.
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2014.
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2014.
Between migration load and evolutionary rescue: dispersal, adaptation and the response of spatially structured populations to environmental change. Proceedings of the Royal Society Series B. 281:1471-2954.
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2014.
Biogas appliances in Sub-Sahara Africa. Biomass and Bioenergy. 70:40-50.
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2014.
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2014.
Climate of origin affects tick (Ixodes ricinus) host-seeking behavior in response to temperature: implications for resilience to climate change? Ecology and Evolution. 4:1186-1198.
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2014.
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2014.
Comparative genomics of type VI secretion systems in strains of Pantoea ananatis from different environments. BMC Genomics. 15:ArticleNo163.
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2014.
Contrasting impacts of afforestation on nitrous oxide and methane emissions. Agricultural and Forest Meteorology. 198:82-93.
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2014.
The current decline of tropical marsupials in Australia: is history repeating? Global Ecology and Biogeography. 23:181-190.
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2014.
Day length dependent restructuring of the leaf transcriptome and metabolome in potato genotypes with contrasting tuberisation phenotypes. Plant Cell and Environment. 37:1351-1363.
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2014.
Distribution and evolution of glycoside hydrolase family 45 cellulases in nematodes and fungi. BMC Evolutionary Biology. 14
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2014.
DTREEv2, a computer-based support system for the risk assessment of genetically modified plants. New Biotechnology. 31:166-171.
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2014.
Dynamics and management of the white potato cyst nematode Globodera pallida in commercial potato crops. Annals of Applied Biology. 164:18-34.
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2014.
Early-life residential exposure to soil components in rural areas and childhood respiratory health and allergy. Science of the Total Environment. 466-467:338-344.
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2014.
Elevating crop disease resistance with cloned genes. Philosophical Transactions of the Royal Society B, Biological Sciences.. 369:ArticleNo20130087.
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2014.
Escherichia coli common pilus (ECP) targets arabinosyl residues in plant cell walls to mediate adhesion to fresh produce plants. Journal of Biological Chemistry. 289:34349-34365.
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2014.
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2014.
Evolving a conceptual framework to explore the links between human wellbeing and the environment. Environmental Scientist. 23:9-14.
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2014.
Experimental evidence that feral cats cause local extirpation of small mammals in Australia's tropical savannas. Journal of Applied Ecology. 51:1486-1493.
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2014.
Factors determining the stability and productivity of small scale anaerobic digesters. Biomass and Bioenergy. 70:51-57.
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2014.
First 20 years of DNDC: model evolution. Ecological Modelling. 292:51-62.
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2014.
Flagella interact with ionic plant lipids to mediate adherence of pathogenic Escherichia coli to fresh produce plants. Environmental Microbiology. 16:2181-2195.
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Genome-wide QTL and bulked transcriptomic analysis reveals new candidate genes for the control of tuber carotenoid content in potato (Solanum tuberosum L.). Theoretical and Applied Genetics. 127:1917-1933.
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2014.
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2014.
The geographical patterns of symbiont diversity in the invasive legume Mimosa pudica can be explained by the competitiveness of its symbionts and by the host genotype. Environmental Microbiology. 16:2099-2111.
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2014.
"Green" nanotechnologies: synthesis of metal nanoparticles using plants. Acta Naturae. 6:35-44.
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2014.
Greenhouse gas emissions from renewable energy sources: A review of lifecycle considerations. Renewable and Sustainable Energy Reviews. 39:461-475.
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2014.
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2014.
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2014.
Impacts of exceptional and extreme inter-annual climatic events on the net ecosystem carbon dioxide exchange of a Sitka spruce forest. Agricultural and Forest Meteorology. 184:147-157.
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2014.
Improving the link between payments and the provision of ecosystem services in agri-environment schemes. Ecosystem Services. 9:44-53.
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2014.
Improving the science-policy dialogue to meet the challenges of biodiversity conservation: having a conversation rather than talking at one-another. Biodiversity and Conservation. 23:387-404.
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2014.
In vitro and in vivo models of colorectal cancer: antigenotoxic activity of berries. Journal of Agricultural and Food Chemistry. 62:3852-3866.
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2014.
Incorporation of urea-derived C-13 into microbial communities in four different agriculture soils. Biology and Fertility of Soils. 50:603-612.
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2014.
Interactions between light intensity and phosphorus nutrition affect the phosphate-mining capacity of white lupin (Lipinus albus L.). Journal of Experimental Botany. 65:2995-3003.
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2014.
The Irish potato famine pathogen Phytophthora infestans originated in central Mexico rather than the Andes. Proceedings of the National Academy of Sciences of the USA. 111:8791-8796.
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2014.
A locus conferring effective late blight resistance in potato cultivar Sarpo Mira maps to chromosome XI. Theoretical and Applied Genetics. 127:647-657.
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2014.
Long term temporal and spatial changes in the distribution of polychlorinated biphenyls and polybrominated diphenyl ethers in Scottish soils. Science of the Total Environment. 468-469:158-164.
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2014.
Loss of labile carbon following soil disturbance determinded by measurement of respired d¹³CO. Soil Biology and Biochemistry. 68:125-132.
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2014.
Loss of microbial diversity in soils is coincident with reductions in some specialized functions. Environmental Microbiology. 16:2408-2420.
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2014.
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2014.
Low levels of ribosomal RNA partly account for the very high photosynthetic phosphorus-use efficiency of Proteaceae species. Plant Cell and Environment. 37:1276-1298.
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2014.
Mapping socio-economic performance in rural Scotland. Scottish Geographical Journal. 130:1-21.
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2014.
Mapping species distributions in one dimension by non homogeneous hidden Markov models: freshwater pearl mussels in the River Dee. Environmental and Ecological Statistics. 21:487-505.
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2014.
Modelling species abundance in a river by Negative Binomial hidden Markov models. Computational Statistics and Data Analysis. 71:599-614.
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2014.
Modelling the hydrological impacts of rural land use change. Hydrology Research. 45:737-754.
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2014.
More plant growth but less plant defence? First global gene expression data for plants grown in soil amended with biochar Global Change Biology Bioenergy. Published online.
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2014.
Mud, muddle and models in the knowledge value-chain to action on tropical peatland conservation. Mitigation and Adaptation Strategies for Global Change. 19:887-905.
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2014.
Permeable reactive interceptors - blocking diffuse nutrient and greenhouse gases losses in key areas of the farming landscape. Journal of Agricultural Science. 152:S71-S81.
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2014.