Publications list
Filters: First Letter Of Last Name is T [Clear All Filters]
Designing future barley ideotypes using a crop model ensemble. European Journal of Agronomy. 82:144-162.
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2017.
Designing future barley ideotypes using a crop model ensemble. European Journal of Agronomy. 82:144-162.
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2017.
Depletion of organic phosphorus from Oxisols in relation to phosphatase activities in the rhizosphere. European Journal of Soil Science. 57:47-57. Abstract
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2006.
Dependence of ombrotrophic peat nitrogen on phosphorus and climate. Biogeochemistry. 125:11-20.
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2015.
Denial of long-term issues with agriculture on tropical peatlands will have devastating consequences. Global Change Biology. 23:977-982.
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2017.
Demographic consequences of increased winter births in a large aseasonally breeding mammal (Bos taurus) in response to climate change. Journal of Animal Ecology. 80:1134-1144.
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2011.
Defining the rhizobium leguminosarum species complex. Genes. 12:ArticleNo.111.
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2021.
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2016.
Defining and delivering resilient ecological networks: nature conservation in England. Journal of Applied Ecology. Published online..
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2018.
Deep rooting and drought screening of cereal crops: A novel field-based method and its application.. Field Crops Research. 112:165-171. Abstract
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2009.
Decomposition processes under Bt (Bacillus thuringiensis) maize: results of a multi-site experiment. Soil Biology & Biochemistry. 38:195-199. Abstract
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2006.
Decomposition of tobacco roots with modified phenylpropanoid content by fungi with contrasting lignocellulose degradation strategies. Biology and Fertility of Soils. 49:305-311.
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2013.
Decomposition in soil of soluble, insoluble and lignin-rich fractions of plant material from tobacco with genetic modifications to lignin biosynthesis. Soil Biology & Biochemistry. 37:751-760. Abstract
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2005.
Decomposition in soil and chemical characteristics of pollen. European Journal of Soil Science. 59:551-558. Abstract
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2008.
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2013.
Day length dependent restructuring of the leaf transcriptome and metabolome in potato genotypes with contrasting tuberisation phenotypes. Plant Cell and Environment. 37:1351-1363.
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2014.
The database of the PREDICTS (Projecting Responses of ecological Diversity in Changing Terrestrial Systems). Ecology and Evolution. 7:145-188.
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2017.
Data on a delivery of biomolecules into Nicothiana benthamiana leaves using different nanoparticles. Data in Brief. 16:1034-1037.
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2018.
Darwin - a mission to detect and search for life on extrasolar planets. Astrobiology. 9:1-22.
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2009.
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2006.
Cylindrical inclusion protein of potato virus A is associated with a subpopulation of particles isolated from infected plants. Journal of General Virology. 89:829-838. Abstract
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2008.
The current decline of tropical marsupials in Australia: is history repeating? Global Ecology and Biogeography. 23:181-190.
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2014.
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2021.
Culling wildlife hosts to control disease: mountain hares, red grouse and louping ill virus. Journal of Applied Ecology. 46(4):926-930.
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2010.
Cucurbit extrafascicular phloem has strong negative impacts on aphids and is not a preferred feeding site. Plant Cell and Environment. 40:2780-2789.
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2017.
Crystal structure of the SPOC domain of the arabidopsis flowering regulator FPA. PLoS ONE. 11:ArticleNo.e0160694.
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2016.
A cross-taxon analysis of the impact of climate change on abundance trends in central Europe. Biological Conservation. 187:41-50.
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2015.
Cross-realm assessment of the impact of climate change on species’ abundance trends. Nature Ecology and Evolution. 1:ArticleNo.0067.
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2017.
Crops, nitrogen, water: are legumes friend, foe, or misunderstood ally? Trends in Plant Science. 23:539-550.
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2018.
Crops that feed the world 8: potato: are the trends of increased global production sustainable? Food Security. 4:477-508.
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2012.
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2011.
Crop yield model validation for Cameroon. Theoretical and Applied Climatology. 96(3-4):275-280.
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2009.
Crop modelling for integrated assessment of risk to food production from climate change. Environmental Modelling and Software. 72:287-303.
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2015.
Crop model improvement reduces the uncertainty of the response to temperature of multi-model ensembles. Field Crops Research. 202:5-20.
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2017.
CRISPR applications in plant virology: virus resistance and beyond. Phytopathology. 110:18-28.
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2020.
Creating contacts between replication and movement at plasmodesmata- a role for membrane contact sites in plant virus infections? Frontiers in Plant Science. 11:ArticleNo.862.
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2020.
Coupling the GAL4 UAS system with alcR for versatile cell type-specific chemically inducible gene expression in Arabidopsis. Plant Biotechnology Journal. 5:465-476. Abstract
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2007.
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2016.
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2019.
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2012.
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2019.
The corn price surge: impacts in rural Mexico. World Development. 39:1878-1887.
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2011.
Conversion of lowland tropical forests to tree cash crop plantations loses up to one-half of stored soil organic carbon. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 112:9956-9960.
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2015.
Control of foliar diseases in barley: towards an integrated approach. European Journal of Plant Pathology. 133:33-73.
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2012.
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2009.
Contribution of plant photosynthate to soil respiration and dissolved organic carbon in a naturally recolonising cutover peatland. Soil Biology and Biochemistry. 40(7):1622-1628.
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2008.
Contribution of crop model structure, parameters and climate projections to uncertainty in climate change impact assessments. Global Change Biology. 24:1291-1307.
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2018.
Contribution of crop model structure, parameters and climate projections to uncertainty in climate change impact assessments. Global Change Biology. 24:1291-1307.
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2018.
Contrasting impacts of afforestation on nitrous oxide and methane emissions. Agricultural and Forest Meteorology. 198:82-93.
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2014.
Contrasting genetic regulation of plant development in wild barley grown in two European environments revealed by nested association mapping. Journal of Experimental Botany. 69:1517-1531.
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2018.
Contrasting effects of summer and winter warming on body mass explain population dynamics in a food-limited Arctic herbivore. Global Change Biology. Published online..
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2016.
Contrasting effects of summer and winter warming on body mass explain population dynamics in a food-limited Arctic herbivore. Global Change Biology. 23:1374-1389.
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2017.
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2017.
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2017.
Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data. 4:ArticleNo.170044.
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2017.
Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data. 4:ArticleNo.170044.
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2017.
Consistent temperature dependence of respiration across ecosystems contrasting in thermal history. Global Change Biology. 18:1300-1311.
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2012.
Considerations for Scottish soil monitoring in the European context. European Journal of Soil Science. 60(5):833-843.
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2009.
Conservation vs divergence in LEAFY and APETALA1 functions between Arabidopsis thaliana and Cardamine hirsuta. New Phytologist. 216:549-561.
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2017.
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2006.
Conflicts between biodiversity conservation and human acivities in the CEEC. Ambio. 36(7):545-550.
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2007.
Conceptualising in catchment modelling: simply learning? Hydrological Processes. 22(13):2389-2393.
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2008.
Conceptualising catchment processes: simply too complex? Hydrological Processes. 22(11):1727-1730.
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2008.
Conceptualisation of runoff processes using tracers and GIS analysis in a nested mesoscale catchment. Hydrological Processes. 21(10):1289-1307.
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2007.
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2020.
Concentrations and geographic distribution of selected organic pollutants in Scottish surface soils. Environmental Pollution. 182:15-27.
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2013.
Concentration-dependent NH3 deposition processes for mixed moorland semi-natural vegetation. Atmospheric Environment. 41:2049-2060. Abstract
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2007.
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2017.
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2017.
Competing conservation goals, biodiversity or ecosystem services : element losses and species recruitment in a managed moorland bracken model system. Journal of Environmental Management. 85(4):1034-1047.
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2007.
Compensating for the costs of polygyny in hen harriers. Behavioural Ecology and Sociobiology. 60(3):386-391.
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2006.
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2005.
Comparison of soil carbon stocks in Scottish soils between 1978 and 2009. European Journal of Soil Science. 64:455-465.
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2013.
Comparison of microbial community assays for the assessment of stream biofilm ecology. Journal of Microbiological Methods. 85:190-198.
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2011.
Comparison of genome sequence of PVY isolates with biological properties. American Journal of Potato Research. 86:227-238.
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2009.
A comparison of ecosystem services delivered by 11 long-term monitoring sites in the UK environmental change network. Environmetrics. 22:639-648.
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2011.
Comparison of DNA walking methods for isolation of transgene flanking regions in GM potato. Molecular Biotechnology. 49:19-31.
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2011.
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2016.
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2005.
Comparative sequence analysis and serological and infectivity studies indicate that cocksfoot mild mosaic virus is a member of the genus Panicovirus. Archives of Virology. 154:1545-1549.
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2009.
A comparative nitrogen balance and productivity analysis of legume and non-legume supported cropping systems: the potential role of biological nitrogen fixation. Frontiers in Plant Science. 7:ArticleNo.1700..
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2016.
Comparative genomics reveals what makes an enterobacterial plant pathogen. Annual Review of Phytopathology. 44:305-336. Abstract
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2006.
Comparative genomics of type VI secretion systems in strains of Pantoea ananatis from different environments. BMC Genomics. 15:ArticleNo163.
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2014.
Comparative genomics of the tardigrades Hypsibius dujardini and Ramazzottius varieornatus. PLoS Biology. 15:e2002266.
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2017.
Comparative assessment of different crop rotation schemes for organic common bean production. Agronomy. 10:ArticleNo.1269.
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2020.
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2011.
Community-based biotic effects as determinants of tree resistance to pests and pathogens. Forest Ecology and Management. 417:301-312.
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2018.
Community energy: entanglements of community, state and private sectors. Geography Compass. 12:ArticleNo.e12378.
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2018.
Comments on 'Baseline values and change in the soil, and implications for monitoring' by R.M. Lark, P.H. Bellamy and G.J.D. Kirk. European Journal of Soil Science. 60:481-483.
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2009.
Comment on "Productivity Is a Poor Predictor of Plant Species Richness". Science. 335:1441.
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2012.
Combining inorganic and organic carbon stable isotope signatures in the Schwalbenberg Loess-palaeosol-sequence near Remagen (Middle Rhine Valley, Germany). Frontiers in Earth Science. 8:ArticleNo.276.
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2020.
Colour displays for categorical images. Color Research and Application. 32:304-309. Abstract
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2007.
Colonisation outwith the colon: plants as an alternative environmental reservoir for human pathogenic enterobacteria. FEMS Microbiology ReviewsFEMS Microbiology Reviews. 33:689-703.
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2008.
Collapsing foundations: the ecology of the British oak, implications of its decline and mitigation options. Biological Conservation. 233:316-327.
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2019.
Cold-dependent expression and alternative splicing of arabidopsis long non-coding RNAs. Frontiers in Plant Science. 10:ArticleNo.235.
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2019.
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2014.
Cohort variation in individual body mass dissipates with age in large herbivores. Ecological Monographs. 86:517-543.
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2016.
Cohort variation in individual body mass dissipates with age in large herbivores. Ecological Monographs. 86:517-543.
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2016.
Co-researching the Cairngorms: supporting the aims of, not just researching in, the Cairngorms National Park. Scottish Geographical Journal.. 127:40-60.
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2011.
Co-ordinated gene expression during phases of dormancy release in raspberry (Rubus idaeus L.) buds.. Journal of Experimental Botany. 58:1035-1045. Abstract
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2007.
Co-adaptation of seed dormancy and flowering time in the arable weed Capsella bursa-pastoris (shepherd's purse). Annals of Botany. 109:481-489.
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2012.
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2011.
Climate variability and maize production in Cameroon: simulating the effects of extreme dry and wet years. Singapore Journal of Tropical Geography. 29:357-370.
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2008.
Climate of origin affects tick (Ixodes ricinus) host-seeking behavior in response to temperature: implications for resilience to climate change? Ecology and Evolution. 4:1186-1198.
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2014.
Climate information and capacity needs for ecosystem management under a changing climate. Procedia Environmental Sciences. 1:206-227.
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2010.
Climate change impact and adaptation for wheat protein. Global Change Biology. 25:155-173.
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2019.
Climate change cannot be entirely responsible for soil carbon loss observed in England and Wales, 1978-2003. Global Change Biology. 13(12):2605-2609.
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2007.
Climate change and ecosystem-based adaptation: a new pragmatic approach to buffering climate change impacts. Current Opinion in Environmental Sustainability. 5:67-71.
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2013.
Climate change and consequences for potato production: a review of tolerance to emerging abiotic stress. Potato Research. 60:239-268.
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2018.
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2009.
ClassII peroxidase-encoding genes are present in a phylogenetically wide range of ectomycorrhizal fungi. ISME Journal. 3(12):1387-1395.
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2009.
Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change. Agricultural Systems. 159:209-224.
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2018.
Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change. Agricultural Systems. 159:209-224.
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2018.
A chromosome conformation capture ordered sequence of the barley genome. Nature. 544:427-433.
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2017.
A chromosome conformation capture ordered sequence of the barley genome. Nature. 544:427-433.
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2017.
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2005.
Chitin-binding protein of verticillium nonalfalfae disguises fungus from plant chitinases and suppresses chitin-triggered host immunity. Molecular Plant Microbe Interactions. 32:1378-1390.
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2019.
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2012.
Chemical speciation studies on DU contaminated soils using flow field flow fractionation linked to inductively coupled plasma mass spectrometry (FIFFF-ICP-MS). Journal of Environmental Monitoring. 14:782-790.
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2012.
Characterization of surface water isotope spatial patterns of Scotland. Journal of Geochemical Exploration. 194:71-80.
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2018.
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2018.
Characterization of immune system cell subsets in fixed tissues from alpine chamois (Rupicapra rupicapra). Journal of Comparative Pathology. 155:207-212.
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2016.
Characterisation of Phytophthora infestans isolates of potato crops from Spain. Potato Research. 62:453-463.
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2019.
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2009.
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2011.
Characterisation of barley landraces from Syria and Jordan for resistance to rhynchosporium and identification of diagnostic markers for Rrs1Rh4. Theoretical and Applied Genetics. 133:1243-1264.
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2020.
Characterisation and pathogenicity of Fusarium taxa isolated from ragwort (Jacobaea vulgaris) roots. Fungal Ecology. 20:186-192.
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2016.
Chapter three - climate change and defence against pathogens in plants. Advances in Applied Microbiology. 81:89-132.
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2012.
Changes in microbial community structure and function following Sphagnum peatland restoration. Soil Biology and Biochemistry. 42(2):291-301.
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2010.
Changes in growth, internode distance and nutrient concentrations of the seagrass Halophila ovalis with exposure to sediment sulphide. Marine Ecology-Progress Series. 361:83-91. Abstract
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2008.
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2008.
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In Press.
Causes of differences in urinary excretion of purine derivatives in buffaloes and cattle. Animal Science. 82(3):355-358.
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2006.
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2012.
Catchment data for process conceptualization: simply not enough? Hydrological Processes. 22(12):2057-2061.
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2008.
Caspase-resistant VirD2 protein provides enhanced gene delivery and expression in plants. Plant Cell Reports. 26:1215-1219. Abstract
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2007.
Carotenoid biosynthesis in plant storage organs: recent advances and prospects for improving plant food quality (Review). Physiologia Plantarum. 124:143-151. Abstract
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2005.
Carbon, water and energy exchange dynamics of a young pine plantation forest during the initial fourteen years of growth. Forest Ecology and Management. 410:12-26.
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2018.
The carbon partitioning of glucose and DIC in mixotrophic, heterotrophic and photoautotrophic cultures of Tetraselmis suecica. Biotechnology Letters. Published online..
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2021.
Carbon dynamics in a model grassland with functionally different soil communities. Functional Ecology. 21(4):690-697.
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2007.
Capability and limitations of a simple grid-based model for simulating land use influences on stream nitrate concentrations. Journal of Hydrology. 507:110-123.
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2013.
Can parasites drive population cycles in mountain hares? Proceedings of the Royal Society of London, B. 276(1662):1611-1617.
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2009.
Can managers inform models? Integrating local knowledge into models of red deer habitat use Journal of Applied Ecology. 46(2):344-352.
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2009.
Can Hymenoscyphus fraxineus infect hardy members of the Oleaceae other than ash species? Forest Pathology. 45:426-429.
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2015.
Can gas chromatography combustion isotope ratio mass spectrometry be used to quantify organic compound abundance? Rapid Communications in Mass Spectrometry. 23:2433-2438.
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2011.
Can analysis of a small clod of soil help to solve a murder case? Science and Justice. 59:667-677.
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2019.
Call for transparency of COVID-19 models. Science. 368:482-483.
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2020.
Calibration of quantitative PCR assays. Journal of Agricultural Biological and Environmental Statistics. 12:364-378. Abstract
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2007.
Calibrating and testing APSIM for wheat-faba bean pure cultures and intercrops across Europe. Field Crops Research. 264:ArticleNo.108088.
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2021.
Calibrating and testing APSIM for wheat-faba bean pure cultures and intercrops across Europe. Field Crops Research. 264:ArticleNo.108088..
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2021.
Cajal bodies and their role in plant stress and disease responses. RNA Biology. 14:779-790.
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2016.
Cajal bodies and the nucleolus are required for a plant virus systemic infection. EMBO Journal. 26:2169-2179. Abstract
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2007.
Caesium inhibits the colonization of Medicago truncatula by arbuscular mycorrhizal fungi. Journal of Environmental Radioactivity. 141:57-61.
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2015.
C-13 PLFAs: a key to open the soil microbial black box? Plant and Soil. 392:3-15.
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2015.
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2013.
Buffering effects of seed banks on plant community diversity in response to land use and climate. Global Ecology and Biogeography. 30:128-139.
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2021.
BTB-BACK domain protein POB1 suppresses immune cell death by targeting ubiquitin E3 ligase PUB17 for degradation. PLoS Genetics. 13:e1006540.
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2017.
British Escherichia coli O157 in Cattle Study (BECS): to determine the prevalence of E-coli O157 in herds with cattle destined for the food chain. Epidemiology and Infection. 145:3168-3179.
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2017.
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2019.
Bridging the gap between national and ecosystem accounting application in Andalusian Forests, Spain. Ecological Economics. 157:218-236.
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2019.
Breeding low-glycemic index barley for functional food. Field Crops Research. 154:31-39.
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2013.
Botrytis cinerea: the cause of grey mould disease. Molecular Plant Pathology. 8:561-580. Abstract
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2007.
Blood-brain barrier permeability and neuroprotective potential of blackberry-digested polyphenols. European Journal of Nutrition. 58:113-130.
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2019.
Birds bias offspring sex ratio in response to livestock grazing. Biology Letters. 7:958-960.
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2011.
Biotic homogenization of upland vegetation: patterns and drivers at multiple spatial scales over five decades. Journal of Vegetation Science. 23:755-770.
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2012.
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2014.
Biological nitrification inhibition (BNI) - Is there potential for genetic interventions in Triticeae? Breeding Science. 59:529-545.
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2009.
Biogeography of plant root-associated fungal communities in the North Atlantic region mirrors climatic variability. Journal of Biogeography. 46:1532-1546.
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2019.
Biogas appliances in Sub-Sahara Africa. Biomass and Bioenergy. 70:40-50.
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2014.
Biofortifying Scottish potatoes with zinc. Plant and Soil. 411:151-165.
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2017.
Biodiversity gains and losses: evidence for homogenisation of Scottish alpine vegetation. Biological Conservation. 142:1728-1739.
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2009.
Bioconda: A sustainable and comprehensive software distribution for the life sciences. Nature Methods. 15:475-476.
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2018.
Biochemical and molecular characterisation of methanotrophs in soil from a pristine New Zealand beech forest. FEMS Microbiology Letters. 275(1):89-97.
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2007.
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2021.
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2013.
Bio.Phylo: a unified toolkit for processing, analyzing and visualizing phylogenetic trees in Biophyton. BMC Bioinformatics. 13:209.
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2012.
Bio-fortification of potato tubers using foliar zinc-fertiliser. Journal of Horticultural Science and Biotechnology. 87:123-129.
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2012.
Between migration load and evolutionary rescue: dispersal, adaptation and the response of spatially structured populations to environmental change. Proceedings of the Royal Society Series B. 281:1471-2954.
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2014.
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2014.
Benchmarking plant diversity of Palaearctic grasslands and other open habitats. Journal of Vegetation Science. 32:ArticleNo.e13050.
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2021.
Bayesian-multiplicative treatment of count zeros in compositional data sets. Central European Journal of Biology. 15:134-158.
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2014.
Bayesian-multiplicative treatment of count zeros in compositional data sets. Central European Journal of Biology. 15:134-158.
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2015.
A Bayesian belief network approach for assessing uncertainty in conceptual site models at contaminated sites. Journal of Contaminant Hydrology. 188:12-28.
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2016.
Barley: a translational model for adaptation to climate change. New Phytologist. 206:913-931.
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2015.
Barley yield formation under abiotic stress depends on the interplay between flowering time genes and environmental cues. Scientific Reports. 9:ArticleNo.6397.
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2019.
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2006.
Barley SIX-ROWED SPIKE3 encodes a putative Jumonji C-type H3K9me2/me3 demethylase that represses lateral spikelet fertility. Nature Communications. 8:ArticleNo.936.
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2017.
The barley phytomer. Annals of Botany. 100:725-733. Abstract
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2007.
Barley has two peroxisomal ABC transporters with multiple functions in beta-oxidation. Journal of Experimental Botany. 65:4833-4847.
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2014.
Barley grain (1,3;1,4)-beta-glucan content: effects of transcript and sequence variation in genes encoding the corresponding synthase and endohydrolase enzymes. Scientific Reports. 9:ArticleNo.17250.
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2019.
Barley adaptation and improvement in the Mediterranean basin. Plant Breeding. 127:554-560.
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2008.
Balancing the trade-offs between ecological and economic risks in the Great Barrier Reef: a pragmatic conceptual framework. Human and Ecological Risk Assessment.. 18:69-91.
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2012.
Bacterial chemoattraction towards jasmonate plays a role in the entry of Dickeya dadantii through wounded tissues. Molecular Microbiology. 74:662-671.
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2009.
BacHBerry: BACterial Hosts for production of Bioactive phenolics from bERRY fruits. Phytochemistry Reviews. 17:291-326.
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2018.
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2015.
Atomic force microscopy of potato virus A.. Colloid Journal. 70:199-201. Abstract
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2008.
Atmospheric deposition of phosphorus to land and freshwater. Environmental Science: Processes and Impacts. 16:1608-1617.
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2014.
Atmospheric CO2 enrichment and nutrient additions to planted soil increase mineralisation of soil organic matter, but do not alter microbial utilisation of plant and soil C-sources. Soil Biology and Biochemistry. 40(9):2434-2440.
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2008.
Asynchrony among local communities stabilises ecosystem function of metacommunities. Ecology Letters. 20:1534-1545.
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2017.
Asynchronous and synchronous updating in individual-based models. Ecological Modelling. 212:522-527. Abstract
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2008.