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Found 1274 results

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2009
Haas BJ, Kamoun S, Zody MC, Jiang RHY, Handsaker RE, Cano LM, Grabherr M, Kodira CD, Raffaele S, Torto-Alalibo T et al..  2009.  Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature. 461:393-398.
Jones JT, Kumar A, Pylypenko LA, Thirugnanasambandam A, Castelli L, Chapman S, Cock PJA, Grenier E, Lilley CJ, Phillips MS et al..  2009.  Identification and functional characterisation of effectors in expressed sequence tags from various life cycle stages of the potato cyst nematode Globodera pallida. Molecular Plant Pathology. 10:815-828.
Rakhshanderhoo F, Takeshita M, Squires J, Palukaitis P.  2009.  The influence of RNA-dependent RNA polymerase 1 on Potato virus Y infection and on other antiviral response genes. Molecular Plant-Microbe Interactions. 22:1312-1318.
Mahajan A, Currie CG, Mackie S, Tree J, McAteer S, McKendrick I, McNeilly TN, Roe A, La Ragione RM, Woodward MJ et al..  2009.  An investigation of the expression and adhesin function of H7 flagella in the interaction of Escherichia coli O157:H7 with bovine intestinal epithelium. Cellular Microbiology. 11:121-137.
Torres-Ca P, Hinojosa MB, Garcia-Ruiz R, Daniell TJ, Carreira JA.  2009.  Linking biogeochemical variability and microbial community structure in forest soils: Abies pinsapo-fir forests as a study case. Ecosistemas. 18:91-102.
Dennis PG, Hirsch PR, Smith SJ, Taylor RG, Valsami-Jones E, Miller AJ.  2009.  Linking rhizoplane pH and bacterial density at the microhabitat scale. Journal of Microbiological Methods. 76:101-104.
Pritchard L, Liu H, Booth C, Douglas E, Fran P, Schrenzel J, Hedley PE, Birch PRJ, Toth IK.  2009.  Microarray comparative genomic hybridisation analysis incorporating genomic organisation, and application to enterobacterial plant pathogens. PLoS Computational Biology. 5:-e1000473.
Blower TR, Fineran PC, Johnson MJ, Toth IK, Humphreys DP, Salmond GPC.  2009.  Mutagenesis and functional characterisation of the RNA and protein components of the toxIN abortive infection and toxin-antitoxin locus of Erwinia. Journal of Bacteriology. 191:6029-6039.
Comadran J, Thomas WTB, van Eeuwijk FA, Ceccarelli S, Grando S, Stanca AM, Pecchioni N, Akar T, Al-Yassin A, Benbelkacem A et al..  2009.  Patterns of genetic diversity and linkage disequilibrium in a highly structured Hordeum vulgare association-mapping population for the Mediterranean basin. Theoretical and Applied Genetics. 119:175-187.
Debeljak M, Kocev D, Towers W, Jones M, Griffiths BS, Hallett PD.  2009.  Potential of multi-objective models for risk-based mapping of the resilience characteristics of soils: demonstration at a national level. Soil Use and Management. 25:66-77.
Hein I, Birch PRJ, Danan S, Lefebvre V, Odeny DA, Gebhardt C, Trognitz F, Bryan GJ.  2009.  Progress in mapping and cloning qualitative and quantitative resistance against Phytophthora infestans in potato and its wild relatives. Potato Research. 52:215-227.
Ma'shum M, Tisdall JM, Borrell AK, McKenzie BM, Gill JS, Kusnarta IGM, Sukartono M, Van Cooten DE.  2009.  Rice responses to soil management in rice-based cropping system in the semi-arid tropics of southern Lombok, Eastern Indonesia. Field Crops Research. 110:197-206. Abstract
Gregory PJ, Bengough AG, Grinev DV, Schmidt S, Thomas WTB, Wojciechowski T, Young IM.  2009.  Root phenomics of crops - opportunities and challenges. Functional Plant Biology. 36:922-929.
Visser RGF, Bachem CWB, de Boer JM, Bryan GJ, Chakrabati SK, Feingold S, Gromadka R, van Ham RCHJ, Huang SW, Jacobs JME et al..  2009.  Sequencing the potato genome: Outline and first results to come from the elucidation of the sequence of the world's most important food crop. American Journal of Potato Research. 86:417-429.
Bradshaw JE, Titley M, Wilson RN.  2009.  Single seed descent as a breeding method for swedes (Brassica napus L. var. napobrassica Peterm). Euphytica. 169:387-401.
Tyler A, Hunter PD, Carvalho L, Codd GA, Elliott JA, Ferguson CA, Hanley ND, Hopkins DW, Maberly SC, Mearns KJ et al..  2009.  Strategies for monitoring and managing mass populations of toxic cyanobacteria in recreational waters: A multi-interdisciplinary approach. Environmental Health. 8 Supplement 1:-S11.
Mess A, Squire GR, Perry JN, Angevin F, Gomez M, Townend P, Sausse C, Breckling B, Langrell S, Dzeroski S et al..  2009.  Sustainable introduction of GM crops into European agriculture: a summary report of the FP6 SIGMEA research project. Ol. 16:37-51.
Pearce MC, Chase-Topping ME, McKendrick IJ, Mellor DJ, Locking ME, Allison L, Ternent HE, Matthews L, Knight HI, Smith AW et al..  2009.  Temporal and spatial patterns of bovine Escherichia coli O157 prevalence and comparison of temporal changes in the patterns of phage types associated with bovine shedding and human E. coli O157 cases in Scotland between 1998-2000 and 2002-2004. BMC Microbiology. 9:-276.
Goodall N, Kisiswa L, Prashar A, Faulkner S, Tokarczuk P, Singh K, Erichsen JT, Guggenheim J, Halfter W, Wride MA.  2009.  Three-dimensional modelling of chick embryo eye development and growth using high resolution magnetic resonance imaging. Experimental Eye Research. 89:511-521.
Birch PRJ, Armstrong MR, Bos J, Boevink P, Gilroy EM, Taylor RM, Wawra S, Pritchard L, Conti L, Ewan R et al..  2009.  Towards understanding the virulence functions of RXLR effectors of the oomycete plant pathogen Phytophthora infestans (Review). Journal of Experimental Botany. 60:1133-1140.
Torrance L, Lukhovitskaya NI, Schepetilnikov MV, Cowan GH, Ziegler A, Savenkov EI.  2009.  Unusual long-distance movement strategies of Potato mop-top virus RNAs in Nicotiana benthamiana. Molecular Plant-Microbe Interactions. 22:381-390.
Swanson MM, Fraser G, Daniell TJ, Torrance L, Gregory PJ, Taliansky ME.  2009.  Viruses in soils: morphological diversity and abundance in the rhizosphere. Annals of Applied Biology. 155:51-60. Abstract
Tingem M, Rivington M, Bellocchi G.  2009.  Adaptation assessments for crop production in response to climate change in Cameroon. Agronomy for Sustainable Development.. 29(2):247-256.
Demars BOL, Tremolieres M.  2009.  Aquatic macrophytes as bioindicators of carbon dioxide in groundwater fed rivers. The Science of the Total Environment. 407(16):4752-4763.
Britton AJ, Beale CM, Towers W, Hewison RL.  2009.  Biodiversity gains and losses: evidence for homogenisation of Scottish alpine vegetation. Biological Conservation. 142:1728-1739.
Irvine RJ, Fiorini S, McLeod J, Turner A, van der Wal R, Armstrong H, Yearley S, White PCL.  2009.  Can managers inform models? Integrating local knowledge into models of red deer habitat use Journal of Applied Ecology. 46(2):344-352.
Townsend SE, Newey SJ, Thirgood SJ, Matthews L, Haydon DT.  2009.  Can parasites drive population cycles in mountain hares? Proceedings of the Royal Society of London, B. 276(1662):1611-1617.
Bodeker ITM, Nygren CMR, Taylor AFS, Olson A, Lindahl BD.  2009.  ClassII peroxidase-encoding genes are present in a phylogenetically wide range of ectomycorrhizal fungi. ISME Journal. 3(12):1387-1395.
Bodecker ITM, Nygren CMR, Taylor AFS, Olson A, Lindahl BD.  2009.  ClassII peroxidase-encoding genes are present in a phylogenetically wide range of ectomycorrhizal fungi Ectomycorrhizal ClassII peroxidase-encoding genes. The ISME Journal. 3:1387-1395.
Potts JM, Chapman SJ, Towers W, on values Campbell C 'BCD, change in thesoil, implications for monitoring' by R.M. Lark BPH, of Science KEJSGJD.  2009.  Comments on 'Baseline values and change in the soil, and implications for monitoring' by R.M. Lark, P.H. Bellamy and G.J.D. Kirk. European Journal of Soil Science. 60:481-483.
Aalders IH, Ball B, Black HIJ, Campbell CD, Griffiths B, Hopkins D, Hough RL, Lilly A, McKenzie B, Rees RM et al..  2009.  Considerations for Scottish soil monitoring in the European context. European Journal of Soil Science. 60(5):833-843.
Tingem M, Rivington M, Bellocchi G, Azam-Ali S, Colls J.  2009.  Crop yield model validation for Cameroon. Theoretical and Applied Climatology. 96(3-4):275-280.
White RM, Fischer A, Marshall K, Travis J, Webb TJ, di Falco S, Redpath S, van der Wal R.  2009.  Developing an integrated conceptual framework to understand biodiversity conflicts. Land Use Policy. 26(2):242-253.
Babulo B, Muys B, Nega F, Tollens E, Nyssen J, Deckers J, Mathijs E.  2009.  The economic contribution of forest resource use to rural livelihoods in Tigray, Northern Ethiopia. Forest Policy and Economics. 11(2):123-131.
Wu G, Liu Z, Du G, Thirgood SJ.  2009.  Effect of fencing and grazing on Kobresia-dominated meadow in the Qinghai-Tibetan Plateau, China. Plant and Soil. 319(1-2):115-126.
Watts EJ, Palmer SCF, Bowman AS, Irvine RJ, Smith A, Travis JMJ.  2009.  The effect of host movement on viral transmission dynamics in a vector-borne disease system. Parasitology. 136(10):1221-1234.
Omsjoe EH, Stien A, Irvine RJ, Albon SD, Dahl E, Thoresen SI, Rustad E, Ropstad E.  2009.  Evaluating capture stress and its effects on reproductive success in Svalbard reindeer. Canadian Journal of Zoology. 87(1):73-85.
Harris G, Thirgood, S.J.; Redpath S, Hopcraft G, Berger J.  2009.  Global decline in aggregated migrations of large terrestrial mammals. Endangered Species Research. 7:55-76.
Redpath SM, Thirgood SJ.  2009.  Hen harriers and red grouse: moving towards consensus? Journal of Applied Ecology. 46(5):961-963.
Tetzlaff D, Seibert J, McGuire K, Laudon H, Burns D, Dunn SM, Soulsby C.  2009.  How does landscape structure influence catchment transit time across different geomorphic provinces? Hydrological Processes. 23(6):945-953.
Hodgkins R, Cooper R, Wadham J, Tranter M.  2009.  The hydrology of the proglacial zone of a high-Arctic glacier (Finsterwalderbreen, Svalbard): Atmospheric and surface water fluxes. Journal of Hydrology. 378(1-2):150-160.
Ode A, Fry G, Tveit M, Messager P, Miller D.  2009.  Indicators of perceived naturalness as drivers of landscape preference. Journal of Environmental Management. 90(1):375-383.
Pakeman RJ, Pugnaire F, Michalet R, Lortie C, Schiffers K, Maestre F, Travis J.  2009.  Is the cask of facilitation ready for bottling? A symposium on the connectivity and future directions of positive plant interactions Biology Letters. 5(5):577-579.
Fortunel C, Garnier E, Joffre R, Kazakou E, Quested H, Grigulis K, Lavorel S, Ansquer P, Castro H, Cruz P et al..  2009.  Leaf traits capture the effects of land use changes and climate on litter decomposability of grasslands across Europe. Ecology. 90(3):598-611.
Trinder CJ, Johnson D, Artz RRE.  2009.  Litter type, but not plant cover, regulates initial litter decomposition and fungal community structure in recolonising cutover peatlands. Soil Biology and Biochemistry. 41(3):651-655.
Thirgood SJ.  2009.  New perspectives on managing wildlife diseases. Journal of Applied Ecology.. 46(2):454-456.
Macdonald CA, Thomas N, Robinson L, Tate KR, Ross DJ, Dando J, Singh BK.  2009.  Physiological, biochemical and molecular responses of soil microbial community after afforestation of pastures with Pinus radiata. Soil Biology and Biochemistry. 41(8):1642-1651.
Frogbrook ZL, Bell J, Bradley RI, Evans C, Lark RM, Reynolds B, Smith P, Towers W.  2009.  Quantifying terrestrial carbon stocks: examining the spatial variation in two upland areas in the UK and a comparison to mapped estimates of soil carbon. Soil Use and Management. 25(3):320-332.
Singh BK, Tate K, Ross D, Dando J, Singh J, Thomas N, Millard P, Murrell JC.  2009.  Soil methane oxidation and methanotroph responses to afforestation of pastures with Pinus radiata stands of different ages. Soil Biology and Biochemistry.. 41:2196-2205.
Ferrera R, Trevisol P, Acutis M, Rana G, Richter G, Baggaley NJ.  2009.  Topographic impacts on wheat yields under climate change: two contrasted case studies in Europe. Theoretical and Applied Climatology. Published online.
Hrachowitz M, Soulsby C, Tetzlaff D, Dawson JJC, Dunn SM, Malcolm IA.  2009.  Using long-term data sets to understand transit times in contrasting headwater catchments. Journal of Hydrology. 367(3-4):237-248.
2008
Titlyanov EA, Kiyashko SI, Titlyanova TV, Kalita TL, Raven JA.  2008.  δ13C and δ15N values in reef corals Porites lutea and P. cylindrica and in their epilithic and endolithic algae. Marine Biology. 155:353-361. Abstract
Davies HV, Bryan GJ, Taylor MA.  2008.  Advances in functional genomics and genetic modification of potato (Review). Potato Research. 51:283-299. Abstract
Caron-Lormier G, Humphry RW, Bohan DA, Hawes C, Thorbek P.  2008.  Asynchronous and synchronous updating in individual-based models. Ecological Modelling. 212:522-527. Abstract
Obraztsova EA, Kalinina NO, Taliansky ME, Gabrenaite-Verkhovskaya R, Makinen K, Yaminsky IV.  2008.  Atomic force microscopy of potato virus A.. Colloid Journal. 70:199-201. Abstract
Pswarayi A, van Eeuwijk FA, Ceccarelli S, Grando S, Comadran J, Russell JR, Francia E, Pecchioni N, Li Destri O, Akar T et al..  2008.  Barley adaptation and improvement in the Mediterranean basin. Plant Breeding. 127:554-560.
Pswarayi A, van Eeuwijk FA, Ceccarelli S, Grando S, Comadran J, Russell JR, Pecchioni N, Tondelli A, Akar T, Al-Yassin A et al..  2008.  Changes in allele frequencies in landraces, old and modern barley cultivars of marker loci close to QTL for grain yield under high and low input conditions. Euphytica. 163:435-447. Abstract
Kilminster KL, Walker DI, Thompson PA, Raven JA.  2008.  Changes in growth, internode distance and nutrient concentrations of the seagrass Halophila ovalis with exposure to sediment sulphide. Marine Ecology-Progress Series. 361:83-91. Abstract
Holden N, Pritchard L, Toth IK.  2008.  Colonisation outwith the colon: plants as an alternative environmental reservoir for human pathogenic enterobacteria. FEMS Microbiology ReviewsFEMS Microbiology Reviews. 33:689-703.
Gabrenaite-Verhouskaya R, Andreev IA, Kalinina NO, Torrance L, Taliansky ME, Makinen K.  2008.  Cylindrical inclusion protein of potato virus A is associated with a subpopulation of particles isolated from infected plants. Journal of General Virology. 89:829-838. Abstract
Webster EA, Tilston EL, Chudek JA, Hopkins DW.  2008.  Decomposition in soil and chemical characteristics of pollen. European Journal of Soil Science. 59:551-558. Abstract
Coulthurst SJ, Lilley KS, Hedley PE, Liu H, Toth IK, Salmond GPC.  2008.  DsbA plays a critical and multifaceted role in the production of secreted virulence factors by the phytopathogen, Erwinia carotovora subsp. atroseptica. Journal of Biological Chemistry. 283:23739-23753. Abstract
Sneddon AA, Tsofliou F, Fyfe CL, Matheson I, Jackson DM, Horgan GW, Winzell MS, Wahle KWJ, Ahren B, Williams LM.  2008.  Effect of a conjugated linoleic acid and omega-3 fatty acid mixture on body composition and adiponectin. Obesity. 16:1019-1024. Abstract
Chatterjee A, Horgan GW, Theobald CM.  2008.  Exposure assessment for pesticide intake from multiple food products: a Bayesian latent-variable approach. Risk Analysis. 28:1727-1736. Abstract
Ducreux LJM, Morris WL, Prosser IM, Morris JA, Beale MH, Wright F, Shepherd T, Bryan GJ, Hedley PE, Taylor MA.  2008.  Expression profiling of potato germplasm differentiated in quality traits leads to the identification of candidate flavour and texture genes. Journal of Experimental Botany. 59:4219-4231. Abstract
Judelson HS, Ah Fong AMV, Aux G, Avrova AO, Bruce CR, Cakir C, da Cunha L, Grenville-Briggs LJ, Latijnhouwers M, Ligterink W et al..  2008.  Gene expression profiling during asexual development of the late blight pathogen Phytophthora infestans reveals a highly dynamic transcriptome. Molecular Plant-Microbe Interaction. 21:433-447. Abstract
Abad P, Gouzy J, Aury JM, Castagnone-Sereno P, Danchin EGJ, Deleury E, Perfus-Barbeoch L, Anthouard V, Artiguenave F, Blok VC et al..  2008.  Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. Nature Biotechnology. 26:909-915.
Kroghsbo S, Madsen C, Poulsen M, Schroder M, Kvist PH, Taylor MA, Gatehouse A, Shu Q, Knudsen I.  2008.  Immunotoxicological studies of genetically modified rice expressing PHA-E lectin or Bt toxin in Wistar rats. Toxicology. 245:24-34. Abstract
Wheaton AD, McKenzie BM, Tisdall JM.  2008.  Management to increase the depth of soft soil improves soil conditions and grapevine performance in an irrigated vineyard. Soil and Tillage Research. 98:68-80. Abstract
Comadran J, Russell JR, van Eeuwijk FA, Ceccarelli S, Grando S, Baum M, Stanca AM, Pecchioni N, Mastrangelo AM, Akar T et al..  2008.  Mapping adaptation of barley to droughted environments. Euphytica. 161:35-45. Abstract
Giuliano G, Tavazza R, Diretto G, Beyer P, Taylor MA.  2008.  Metabolic engineering of carotenoid biosynthesis in plants. Trends in Biotechnology. 26:139-145. Abstract
Morris WL, Ducreux LJM, Bryan GJ, Taylor MA.  2008.  Molecular dissection of sensory traits in the potato tuber. American Journal of Potato Research. 85:286-297.
Nonyane BAS, Theobold CM.  2008.  Multiplicative models for combining information from several sensory experiments: A Bayesian analysis. Food Quality and Preference. 19:260-266. Abstract
Dennis PG, Miller AJ, Clark IM, Taylor RG, Valsami-Jones E, Hirsch PR.  2008.  A novel method for sampling bacteria on plant root and soil surfaces at the microhabitat scale. Journal of Microbiological Methods. 75:12-18. Abstract
Baccini M, Bachmaier EM, Biggeri A, Boekschoten MV, Bouwman FG, Brennan L, Caesar R, Cinti S, Coort SL, Crosley K et al..  2008.  The NuGO proof of principle study package: a collaborative research effort of the European Nutrigenomics Organisation. Genes and Nutrition. 3:147-151.
Stark LA, Taliansky ME.  2008.  Old and new faces of the nucleolus. Workshop on the nucleolus and disease. EMBO Reports. 10:35-40. Abstract
Blok VC, Jones JT, Phillips MS, Trudgill DL.  2008.  Parasitism genes and host range disparities in biotrophic nematodes: the conundrum of polyphagy versus specialism. Bioessays. 30:249-259. Abstract
Canetta E, Kim S-H, Kalinina NO, Shaw J, Adya AK, Gillespie T, Brown JWS, Taliansky ME.  2008.  A plant virus movement protein forms ringlike complexes with the major nucleolar protein, fibrillarin, in vitro. Journal of Molecular Biology. 376:932-937. Abstract
Liu H, Coulthurst SJ, Pritchard L, Hedley PE, Ravensdale M, Humphris SN, Burr T, Takle GW, Brurberg MB, Birch PRJ et al..  2008.  Quorum sensing coordinates brute force and stealth modes of infection in the plant pathogen Pectobacterium atrosepticum. PLoS Pathogens. 4:-e1000093. Abstract
Broadley MR, Hammond JP, King GJ, Astley D, Bowen HC, Meacham MC, Mead A, Pink DAC, Teakle G, Hayden R et al..  2008.  Shoot calcium and magnesium concentrations differ between subtaxa, are highly heritable, and associate with potentially pleiotropic loci in Brassica oleracea. Plant Physiology. 146:1707-1720. Abstract
Griffiths BS, Caul S, Thompson J, Hackett CA, Cortet J, Pernin C, Krogh PH.  2008.  Soil microbial and faunal responses to herbicide tolerant maize and herbicide in two soils. Plant and Soil. 308:93-103. Abstract
Tilston EL, Halpin C, Hopkins DW.  2008.  Tissue culture propagation alters plant-microbe interactions in tobacco rhizosphere. Biology and Fertility of Soils. 44:897-901. Abstract
Chichkova NV, Galiullina RA, Taliansky ME, Vartapetian AB.  2008.  Tissue disruption activates a plant caspase-like protease with TATD cleavage specificity. Plant Stress. 2:89-95. Abstract
Druka A, Druka I, Centeno AG, Li H, Sun Z, Thomas WTB, Bonar N, Steffenson BJ, Ullrich SE, Kleinhofs A et al..  2008.  Towards systems genetic analyses in barley: Integration of phenotypic, expression and genotype data into GeneNetwork. BMC Genetics. 9:-73. Abstract
Tingem M, Rivington M, Bellocchi G, Azam-Ali S, Colls J.  2008.  Adaptation assessments for crop production in response to climate change in Cameroon. African Journal of Plant Science and Biotechnology. 2:10-17.
Paterson E, Thornton B, Midwood AJ, Osborne SM, Sim A, Millard P.  2008.  Atmospheric CO2 enrichment and nutrient additions to planted soil increase mineralisation of soil organic matter, but do not alter microbial utilisation of plant and soil C-sources. Soil Biology and Biochemistry. 40(9):2434-2440.
Soulsby C, Neal C, Laudon H, Burns DA, Merot P, Bobnell M, Dunn SM, Tetzlaff D.  2008.  Catchment data for process conceptualization: simply not enough? Hydrological Processes. 22(12):2057-2061.
Tingem M, Rivington M, Colls J.  2008.  Climate variability and maize production in Cameroon: simulating the effects of extreme dry and wet years. Singapore Journal of Tropical Geography. 29:357-370.
Tetzlaff D, McDonnell JJ, Uhlenbrook S, McGuire KJ, Bogaart P, Naef F, Baird AJ, Dunn SM, Soulsby C.  2008.  Conceptualising catchment processes: simply too complex? Hydrological Processes. 22(11):1727-1730.
Dunn SM, Freer J, Weiler M, Kirkby MJ, Seibert J, Quinn PF, Lischeid G, Tetzlaff D, Soulsby C.  2008.  Conceptualising in catchment modelling: simply learning? Hydrological Processes. 22(13):2389-2393.
Trinder CJ, Artz RRE, Johnson D.  2008.  Contribution of plant photosynthate to soil respiration and dissolved organic carbon in a naturally recolonising cutover peatland. Soil Biology and Biochemistry. 40(7):1622-1628.
Baines D, Redpath S, Richardson M, Thirgood, S.J.; Redpath S.  2008.  The direct and indirect effects of predation by Hen Harriers Circus cyaneus on trends in breeding birds on a Scottish grouse moor. Ibis. 150(Supplement 1):27-36.
Demars BOL, Thiebaut G.  2008.  Distribution of aquatic plants in the Northern Vosges rivers: implications for biomonitoring and conservation. Aquatic Conservation: Freshwater and Marine Ecosystem. 18:619-632.
Tingem M, Rivington M, Bellocchi G, Azam-Ali S, Colls J.  2008.  Effects of climate change on Cameroon crop production: Simulation results using GCM scenarios. Climate Research. 36:65-77.
Brooker RW, Maestre FT, Callaway RM, Lortie CL, Cavieres LA, Kunstler G, Liancourt P, Tielborger K, Travis JMJ, Anthelme F et al..  2008.  Facilitation in plant communities: the past, the present and the future. Journal of Ecology. 96:18-34.
Lin H, Cai ZY, Zhang T, Su J, Thirgood, S.J.; Redpath S.  2008.  Genetic diversity of the subterranean Gansu zokor in a semi-natural landscape. Journal of Zoology. 275(2):153-159.
Nygren CMR, Eberhardt U, Karlsson M, Parrent JL, Lindahl BD, Taylor AFS.  2008.  Growth on nitrate and occurrence of nitrate reductase-encoding genes in a phylogenetically diverse range of ectomycorrhizal fungi. New Phytologist. 180(4):875-889.
Thirgood SJ, Redpath S.  2008.  Hen harriers and red grouse: science, politics and human-wildlife conflict. Journal of Applied Ecology. 45(5):1488-1492.
Babulo B, Muys B, Fredu N, Tollens E, Nyssen J, Deckers J, Mathijs E.  2008.  Household livelihood strategies and forest dependence in the highlands of Tigray, Northern Ethiopia. Agricultural Systems. 98:147-155.
Thomas MM, Millard P, Watt MS, Turnbull MH, Peltzer D, Whitehead D.  2008.  The impact of defoliation on nitrogen translocation patterns in Buddleia davidii FRANCH. Functional Plant Biology. 35(6):462-469.
Amar A, Thirgood SJ, Pearce-Higgins J, Redpath S.  2008.  The impact of raptors on the abundance of upland passerines and waders. Oikos. 117(8):1143-1152.
Toberman H, Freeman C, Artz RRE, Evans C, Fenner N.  2008.  Impeded drainage stimulates extracellular phenol oxidase activity in riparian peat cores. Soil Use and Management. 24(4):357-365.
Brown I, Towers W, Rivington M, Black HIJ.  2008.  The influence of climate change on agricultural land-use potential: adapting and updating the land capability system for Scotland. Climate Research. 37(1):43-57.
Dawson JJC, Soulsby C, Tetzlaff D, Hrachowitz M, Dunn SM, Malcolm IA.  2008.  Influence of hydrology and seasonality on long-term DOC exports from three contrasting upland catchments. Biogeochemistry. 90(1):93-113.
Trinder CJ, Artz RRE, Johnson D.  2008.  Interactions between fungal community structure, litter decomposition and depth of water-table in a cutover peatland. FEMS Microbiology Ecology. 64(3):433-448.
Dunn SM, Bacon JR, Soulsby C, Tetzlaff D, Stutter MI, Waldron S, Malcolm IA.  2008.  Interpretation of homogeneity in &18O signatures of stream water in a nested sub-catchment system in north east Scotland. Hydrological Processes. 22:4767-4782.
Midwood AJ, Thornton B, Millard P.  2008.  Measuring the 13C content of soil respired CO2 using a novel open chamber system. Rapid Communications in Mass Spectrometry. 22:2073-2081.
Macdonald LM, Singh BK, Thomas N, Brewer M, Campbell CD, Dawson LA.  2008.  Microbial DNA profiling by multiplex terminal restriction fragment length polymorphism for forensic examination of soil evidence and the influence of sample condition. Journal Applied Microbiology. 105(3):813-821.
Leckie FM, Arroyo B, Redpath SM, Thirgood SJ.  2008.  Parental differences in brood provisioning by Hen Harriers Circus cyaneus. Bird Study. 55(2):209-215.
Debeljak M, Kocev D, Towers W, Jones M, Griffiths BS, Hallett PD.  2008.  Potential of multi-objective models for risk-based mapping of the resilience characteristics of soils: demonstration at a national level. Soil Use and Management. 25(1):66-77.
Rouchier J, Cioffi-Revilla C, Polhill JG, Takadama K.  2008.  Progress in model-to-model analysis. Journal of Artificial Societies and Social Simulation. 11(2):8.
Toberman H, Freeman C, Evans C, Fenner N, Artz RRE.  2008.  Summer drought decreases soil fungal diversity and associated phenol oxidase activity in upland Calluna heathland soil. FEMS Microbiology Ecology. 66(2):426-436.
Toberman H, Evan C, Freeman C, Fenner N, Artz RRE.  2008.  Summer drought effects upon soil and litter phenol oxidase activity and soluble carbon release in an upland Calluna heathland. Soil Biology and Biochemistry. 40(6):1519-1532.
Trinder CJ, Artz RRE, Johnson D.  2008.  Temporal patterns of litter production by vascular plants colonising cut-over peatlands. Wetlands. 28(1):245-250.
Thornton I, Farago ME, Thums CR, Parrish RR, McGill RAR, Breward N, Fortey NJ, Simpson P, Young SD, Tye AM et al..  2008.  Urban geochemistry: research strategies to assist risk assessment and remediation of brownfield sites in urban areas. Environmental Geochemistry and Health. 30:565-576.
2007
Kr E, Tups A, Archer ZA, Ross AW, Moar KM, Bell LM, Duncan JS, Mayer CD, Morgan PJ, Mercer JG et al..  2007.  Altered expression of SOCS3 in the hypothalamic arcuate nucleus during seasonal body mass changes in the field vole, Microtus agrestis. Journal of Neuroendocrinology. 19:83-94. Abstract
Tetzlaff D, Waldron S, Brewer MJ, Soulsby C.  2007.  Assessing nested hydrological and hydrochemical behaviour of a mesoscale catchment using continuous tracer data. Journal of Hydrology. 336:430-443. Abstract
Forster BP, Franckowiak JD, Lundqvist U, Lyon J, Pitkethly I, Thomas WTB.  2007.  The barley phytomer. Annals of Botany. 100:725-733. Abstract
Williamson B, Tudzynski B, Tudzynski P, Van Kan JAL.  2007.  Botrytis cinerea: the cause of grey mould disease. Molecular Plant Pathology. 8:561-580. Abstract
Kim S-H, Ryabov EV, Kalinina N, Rakitina DV, Gillespie T, MacFarlane SA, Haupt S, Brown JWS, Taliansky ME.  2007.  Cajal bodies and the nucleolus are required for a plant virus systemic infection. EMBO Journal. 26:2169-2179. Abstract
Roberts AMI, Theobold CM, McNeil M.  2007.  Calibration of quantitative PCR assays. Journal of Agricultural Biological and Environmental Statistics. 12:364-378. Abstract
Reavy B, Bagirova S, Chichkova NV, Fedoseeva SV, Kim S-H, Vartapetian AB, Taliansky ME.  2007.  Caspase-resistant VirD2 protein provides enhanced gene delivery and expression in plants. Plant Cell Reports. 26:1215-1219. Abstract
Mazzitelli L, Hancock RD, Haupt S, Walker PG, Pont SDA, McNicol JW, Cardle L, Morris J, Viola R, Brennan RM et al..  2007.  Co-ordinated gene expression during phases of dormancy release in raspberry (Rubus idaeus L.) buds.. Journal of Experimental Botany. 58:1035-1045. Abstract
Glasbey CA, van der Heijden GWAM, Toh VFK, Gray A.  2007.  Colour displays for categorical images. Color Research and Application. 32:304-309. Abstract
Jones MR, Leith ID, Fowler D, Raven JA, Sutton MA, Nemitz E, Cape JN, Sheppard LJ, Smith RI, Theobold MR.  2007.  Concentration-dependent NH3 deposition processes for mixed moorland semi-natural vegetation. Atmospheric Environment. 41:2049-2060. Abstract
Sakvarelidze L, Tao Z, Bush M, Roberts GR, Leader DJ, Doonan JH, Rawsthorne S.  2007.  Coupling the GAL4 UAS system with alcR for versatile cell type-specific chemically inducible gene expression in Arabidopsis. Plant Biotechnology Journal. 5:465-476. Abstract
Tzortzakakis EA, Blok VC.  2007.  Differentiation in two populations of Meloidogyne incognita from Greece in relation to reproduction on resistant tomato and pepper. Journal of Plant Diseases and Protection. 114:276-277. Abstract
Chope GA, Terry LA, White PJ.  2007.  The effect of 1-methylcyclopropene (1-MCP) on the physical and biochemical characteristics of onion cv. SS1 bulbs during storage. Postharvest Biology and Technology. 44:131-140. Abstract
Ravirala RS, Barabote RD, Wheeler DM, Reverchon S, Tatum O, Malouf J, Liu H, Pritchard L, Hedley PE, Birch PRJ et al..  2007.  Efflux pump gene expression in Erwinia chrysanthemi is induced by exposure to phenolic acids. Molecular Plant-Microbe Interactions. 20:313-320. Abstract
Cortet J, Griffiths BS, Bohanec M, Demsar D, Andersen MN, Caul S, Birch ANE, Pernin C, Tabone E, de Vaufleury A et al..  2007.  Evaluation of effects of transgenic Bt maize on microarthropods in a European multi-site experiment. Pedobiologia. 51:207-218. Abstract
Watanabe T, Broadley MR, Jansen S, White PJ, Takada J, Satake K, Takamatsu T, Tuah SJ, Osaki M.  2007.  Evolutionary control of leaf element composition in plants. New Phytologist. 174:516-523. Abstract
Grant OM, Tronina L, Jones HG, Chaves MM.  2007.  Exploring thermal imaging variables for the detection of stress responses in grapevine under different irrigation regimes. Journal of Experimental Botany. 58:815-825. Abstract
Butler A, Heffernan JE, Tawn JA, Flather RA, Horsburgh KJ.  2007.  Extreme value analysis of decadal variations in storm surge elevations. Journal of Marine Systems. 67:189-200. Abstract
Lichner L, Hallett PD, Feeney D, Dugova O, Sir M, Tesar M.  2007.  Field measurement of soil water repellency and its impact on water flow under different vegetation. Biologia. 62:537-541. Abstract
Forster BP, Tuvesson S, Weyen J.  2007.  Foreword: Gametic cells and molecular breeding for crop improvement. Euphytica. 158:273-274. Abstract
Ramsey JS, Wilson ACC, de Vos M, Sun Q, Tamborindeguy C, Winfield A, Malloch G, Smith DM, Fenton B, Gray SM et al..  2007.  Genomic resources for Myzus persicae: EST sequencing, SNP identification, and microarray design. BMC Genomics. 8:-423. Abstract
Kim S-H, MacFarlane SA, Kalinina NO, Rakitina DV, Ryabov E, Gillespie T, Haupt S, Brown JWS, Taliansky ME.  2007.  Interaction of a plant virus-encoded protein with the major nucleolar protein fibrillarin is required for systemic virus infection. Proceedings of the National Academy of Sciences, USA. 104:11115-11120.
Griffiths BS, Caul S, Thompson J, Birch ANE, Cortet J, Andersen MN, Krogh PH.  2007.  Microbial and microfaunal community structure in cropping systems with genetically modified plants. Pedobiologia. 51:195-206. Abstract
Rae SJ, Macaulay M, Ramsay L, Leigh F, Matthews D, O'Sullivan DM, Donini P, Morris PC, Powell W, Marshall DF et al..  2007.  Molecular barley breeding. Euphytica. 158:295-303. Abstract
Morris WL, Ducreux LJM, Bryan GJ, Taylor MA.  2007.  Molecular dissection of sensory traits in the potato tuber. American Journal of Potato Research. 85:286-297. Abstract
Szili-Kovacs T, Torok K, Tilston EL, Hopkins DW.  2007.  Promoting microbial immobilization of soil nitrogen during restoration of abandoned agricultural fields by organic additions. Biology and Fertility of Soils. 43:823-828.
Bohanec M, Cortet J, Griffiths BS, Znidarsic M, Debeljak M, Caul S, Thompson J, Krogh PH.  2007.  A qualitative multi-attribute model for assessing the impact of cropping systems on soil quality. Pedobiologia. 51:239-250. Abstract
Forster BP, Herberle-Bors E, Kasha KJ, Touraev A.  2007.  The resurgence of haploids in higher plants. Trends in Plant Science. 12:368-375. Abstract
de Dorlodot S, Forster BP, Pag L, Price AH, Tuberosa R, Draye X.  2007.  Root system architecture: opportunities and constraints for genetic improvement of crops. Trends in Plant Science. 12:474-481. Abstract
Poulsen M, Schroder M, Wilcks A, Kroghsbo S, Lindecrona RH, Miller A, Frenzel T, Danier J, Rychlik M, Shu QY et al..  2007.  Safety testing of GM-rice expressing PHA-E lectin using a new animal test design. Food and Chemical Toxicology. 45:364-377. Abstract
Zhan J, Torriani SFF, McDonald BA.  2007.  Significant difference in pathogencity between MAT1-1 and MAT1-2 isolates in the wheat pathogen Mycosphaerella graminicola.. Fungal Genetics and Biology. 44:339-346. Abstract
Velikova V, Edreva AM, Tsonev T, Jones HG.  2007.  Singlet oxygen quenching by phenylamides and their parent compounds. Zeischrift f. 62c:833-838.
Whisson SC, Boevink P, Moleleki LN, Avrova AO, Morales JG, Gilroy EM, Armstrong MR, Grouffaud S, van West P, Chapman S et al..  2007.  A translocation signal for delivery of oomycete effector proteins into host plant cells. Nature. 450:115-118. Abstract
Morris WL, Ross HA, Ducreux LJM, Bradshaw JE, Bryan GJ, Taylor MA.  2007.  Umami compunds are a determinant of the flavor of potato (Solanum tuberosum L.).. Journal of Agricultural and Food Chemistry. 55:9627-9633. Abstract
Griffiths BS, Heckmann LH, Caul S, Thompson J, Scrimgeour CM, Krogh PH.  2007.  Varietal effects of eight paired lines of transgenic Bt maize and near-isogenic non-Bt maize on soil microbial and nematode community structure. Plant Biotechnology Journal. 5:60-68. Abstract
Thoss V, O'Reilly-Wapstra J, Iason GR.  2007.  Assessment and implications of intra-specific and phenological variability in monoterpenes of Scots pine (Pinus sylvestris) foliage. Journal of Chemical Ecology. 33(3):477-491.
Tingem M, Rivington M, Azam-Ali S, Colls J.  2007.  Assessment of the ClimGen stochastic weather generator at Cameroon sites. African Journal of Environmental Science and Technology. 1:86-92.
Johnston SL, Souter DM, Erwin SS, Tolkamp BJ, Yearsley JM, Gordon IJ, Illius AW, Kyriazakis I, Speakman JR.  2007.  Associations between basal metabolic rate and reproductive performance in C57BL/6J mice. Journal of Experimental Biology. 210(1):65-74.
Singh BK, Tate KR.  2007.  Biochemical and molecular characterisation of methanotrophs in soil from a pristine New Zealand beech forest. FEMS Microbiology Letters. 275(1):89-97.
Bradford MA, Tordoff GM, Black HIJ, Cook R, Eggers T, Garnett MH, Grayston SJ, Hutcheson KA, Ineson P, Newington JE et al..  2007.  Carbon dynamics in a model grassland with functionally different soil communities. Functional Ecology. 21(4):690-697.
Smith P, Chapman SJ, Scott WA, Black HIJ, Wattenbach M, Milne R, Campbell CD, Lilly A, Ostle N, Levey P et al..  2007.  Climate change cannot be entirely responsible for soil carbon loss observed in England and Wales, 1978-2003. Global Change Biology. 13(12):2605-2609.
Marrs RH, Galtress K, Tong C, Cox ES, Blackbird SJ, Heyes TJ, Pakeman RJ, Le Duc MG.  2007.  Competing conservation goals, biodiversity or ecosystem services : element losses and species recruitment in a managed moorland bracken model system. Journal of Environmental Management. 85(4):1034-1047.
Tetzlaff D, Soulsby C, Waldron S, Malcolm BDIAPJS, Lilly A, Youngson AF.  2007.  Conceptualisation of runoff processes using tracers and GIS analysis in a nested mesoscale catchment. Hydrological Processes. 21(10):1289-1307.
Young J, Richards C, Fischer A, Halada L, Kull T, Kuzniar A, Tartes U, Uzunov Y, Watt A.  2007.  Conflicts between biodiversity conservation and human acivities in the CEEC. Ambio. 36(7):545-550.
Paoletti, M.G, Osler GHR, Kinnear A, Black DG, Thomson LJ, Tsitsilas A, Sharley D, Judd S, Neville P et al..  2007.  Detritivores as indicators of landscape stress and soil degradation. Australian Journal of Experimental Agriculture. 47(4):412-423.
McAdam JH, Sibbald AR, Teklehaimanot Z, Eason W.  2007.  Developing silvopastoral systems and their effects on diversity of fauna. Agroforestry Systems. 70(1):81-89.
Newey SJ, Willebrand T, Haydon D, Dahl F, Aebischer N, Smith A, Thirgood SJ.  2007.  Do mountain hare populations cycle? Oikos. 116(9):1547-1557.
Devereux G, McNeill G, Newman G, Turner S, Craig L, Martindale S, Helms P, Seaton A.  2007.  Early childhood wheezing symptoms in relation to plasma selenium in pregnant mothers and neonates. Clinical and Experimental Allergy. 37:1000-1008.
Singh BK, Tate KR, Kolipaka G, Hedley CB, Macdonald CA, Millard P, Murrell JC.  2007.  Effect of afforestation and reforestation of pastures on the activity and population dynamics of methanotrophic bacteria. Applied and Environmental Microbiology. 73(16):5153-5161.
Treonis AM, Cook R, Dawson LA, Grayston SJ, Mize T.  2007.  Effects of a plant parasitic nematode (Heterodera trifolii) on clover roots and soil microbial communities. Biology and Fertility of Soils. 43(5):541-548.
Rhind SM, Kyle CE, Mackie C, Telfer G.  2007.  Effects of exposure of ewes to sewage sludge-treated pasture on phthalate and alkyl phenol concentrations in their milk. The Science of the Total Environment. 383(1-3):70-80.
Tagarelli G, Fiorini S, Piro A, Luiselli D, Tagarelli A, Pettener D.  2007.  Ethnicity and biodemographic structure in the Arbereshe of the province of Cosenza, Souther Italy in the XIX century. Collegium Antropologicum. 31:331-338.
Fiorini S, Tagarelli G, Boattini A, Luiselli D, Piro A, Tagarelli A, Pettener D.  2007.  Ethnicity and evolution of the biodemographic structure of Arbereshe and Italian populations of the Pollino Area, Southern Italy (1820-1984). American Anthropologist. 109(4):735-746.
Wadham JL, Cooper RJ, Tranter M, Bottrell S.  2007.  Evidence for widespread anoxia in the proglacial zone of an Arctic glacier. Chemical Geology. 243(1-2):1-15.
Lian X, Zhang T, Ca SYJ, Thirgood SJ.  2007.  Group size affects foraging and vigilance in migratory Tibetan antelope. Behavioural Processes. 76(3):192-197.
Sinclair ARE, Mduma SAR, Hopcraft G, Fryxell J, Hillborn R, Thirgood SJ.  2007.  Long-term ecosystem dynamics in the Serengeti: lessons for conservation. Conservation Biology. 21(3):580-590.
Tate KR, Ross DJ, Saggar S, Hedley CB, Dando J, Singh BK, Lamb SJ.  2007.  Methane uptake in soils from Pinus radiata plantations, a reverting shrubland and adjacent pastures: effects of land-use change, and soil texture, water and mineral nitrogen. Soil Biology and Biochemistry. 39(7):1437-1449.
Brooker RW, Travis JMJ, Clark EJ, Dytham C.  2007.  Modelling species' range shifts in a changing climate: The impacts of biotic interactions, dispersal distance and the rate of climate change. Journal of Theoretical Biology. 245(1):59-65.
Stutter MI, Lumsdon DG, Thoss V.  2007.  Physico-chemical and biological controls on dissolved organic matter in peat aggregate soil columns. European Journal of Soil Science. 58:646-657.
Tolkamp BJ, Yearsley JM, Gordon IJ, Illius AW, Speakman JR, Kyriazakis I.  2007.  Predicting the effects of body fatness on food intake and performance of sheep. British Journal of Nutrition. 97(6):1206-1215.
Thornton B, Osborne SM, Paterson E, Cash P.  2007.  A proteomic and targeted metabolomic approach to investigate change in Lolium perenne roots when challenged with glycine. Journal of Experimental Botany. 58(7):1581-1590.
Szubert J, Reiff C, Thorburn AP, Singh BK.  2007.  REMA: A computer-based mapping tool for analysis of restriction sites in multiple DNA sequences. Journal of Microbiological Methods. 69(2):411-413.
Paterson E, Gebbing T, Abel C, Sim A, Telfer G.  2007.  Rhizodeposition shapes rhizosphere microbial community structure in organic soil. New Phytologist. 173(3):600-610.
Matthiopoulos J, Graham K, Smout S, Asseburg C, Redpath S, Thirgood SJ, Hudson P, Harwood J.  2007.  Sensitivity to assumptions in models of generalist predation on a cyclic prey. Ecology. 88(10):2576-2586.
Kerlin D, Haydon D, Miller D, Aebischer N, Smith A, Thirgood SJ.  2007.  Spatial synchrony in red grouse population dynamics. Oikos. 116(12):2007-2016.
Gaston KJ, Davies RC, David C, Orme L, Olson VA, Thomas GH, Ding TS, Rasmussen PC, Lennon JJ, Bennett PM et al..  2007.  Spatial turnover in the global avifauna. Proceedings of the Royal Society of London, B. 274(1618):1567-1574.
Newey SJ, Dahl F, Willebrand T, Thirgood SJ.  2007.  Unstable dynamics and population regulation in mountain hares: a review. Biological Reviews. 82(4):527-549.
Thirgood SJ, Mduma SAR, Keyyu JD, Laurenson MK.  2007.  The value of long-term research: conservation science and practice in Tanzania. Conservation Biology. 21(3):576-579.
Dullinger S, Kleinbauer I, Pauli H, Gottfried M, Brooker RW, Nagy L, Theurillat JP, Holten JI, Abdaladze O, Benito JL et al..  2007.  Weak and variable relationships between environmental severity and small-scale co-occurrence in alpine plant communities. Journal of Ecology. 95(6):1284-1295.
2006
Jiang RHY, Tyler BM, Whisson SC, Hardham AR, Govers F.  2006.  Ancient origin of elicitin gene clusters in Phytophthora genomes. Molecular Biology and Evolution. 23:338-351. Abstract
Toth IK, Pritchard L, Birch PRJ.  2006.  Comparative genomics reveals what makes an enterobacterial plant pathogen. Annual Review of Phytopathology. 44:305-336. Abstract
Heckmann L, Griffiths BS, Caul S, Thompson J, Pusztai-Carey M, Moar, W.J, Andersen MN, Krogh PH.  2006.  Consequences for Protaphorura armata (Collembola: Onychiuridae) following exposure to genetically modified Bacillus thuringiensis (Bt) maize and non-Bt maize. Environmental Pollution. 142:212-216. Abstract

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.