Publications list
Filters: First Letter Of Last Name is W [Clear All Filters]
A putative DEAD-box RNA-helicase is required for normal zoospore development in the late blight pathogen Phytophthora infestans. Fungal Genetics and Biology. 45:954-962. Abstract
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2008.
The 'Goldilocks Zone' of predation: the level of fox control needed to select predator resistance in a reintroduced mammal in Australia. Biodiversity and Conservation. Published online..
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2021.
The 172 kb genomic DNA region of the O. rufipogon ylg1.1 locus: comparative sequence analysis with O. sativa ssp. japonica and O. sativa ssp. indica. Functional & Integrative Genomics. 9:97-108.
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2009.
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2021.
The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies. Journal of Biomedical Semantics. 4
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2013.
Absence of Curli in soil-persistent Escherichia coli is mediated by a C-di-GMP signaling defect and suggests evidence of biofilm-independent niche specialization. Frontiers in Microbiology. 9:ArticleNo.1340.
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2018.
Absorption efficiencies and basal turnover of C, N and fatty acids in a marine Calanoid copepod. Functional Ecology. 25:509-518.
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2011.
Accelerating root system phenotyping of seedlings through a computer-assisted processing pipeline. Plant Methods. 13:ArticleNo.57.
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2017.
Achieving dietary recommendations and reducing greenhouse gas emissions: modelling diets to minimise the change from current intakes. International Journal of Behavioral Nutrition and Physical Activity. 13
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2016.
Activity energy expenditure is an independent predictor of energy intake in humans. International Journal of Obesity. 43:1466-1474.
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2019.
Adaptation of water resources systems to changing society and environment: a statement by the International Association of Hydrological Sciences. Hydrological Sciences Journal. 61:2803-2817.
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2016.
Adaptation response surfaces for managing wheat under perturbed climate and CO2 in a Mediterranean environment. Agricultural Systems. Published online..
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2017.
Adaptation response surfaces for managing wheat under perturbed climate and CO2 in a Mediterranean environment. Agricultural Systems. 159:260-274.
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2018.
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2013.
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2020.
Adding ‘iterativity’ to the credibility, relevance, legitimacy: A novel scheme to highlight dynamic aspects of science-policy interfaces. Environmental Science and Policy. 54:505-512.
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2015.
Addressing "nature-deficit disorder": a mixed methods pilot study of young adults attending a wilderness camp. Evidence based Complimentary and Alternative Medicine. Article No. 651827
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2015.
Adsorptive removal of imidacloprid by potassium hydroxide activated magnetic sugarcane bagasse biochar: adsorption efficiency, mechanism and regeneration. Journal of Cleaner Production. 292:ArticleNo.126005.
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2021.
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2009.
The age of CO2 released from soils in contrasting ecosystems during the arctic winter. Soil Biology and Biochemistry. 63:1-4.
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2013.
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2016.
An agent-based model to simulate meat consumption behaviour of consumers in Britain. Journal of Artificial Societies and Social Simulation. 22:ArticleNo.8.
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2019.
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2011.
Agronomic biofortification of cowpea with selenium: effects of selenate and selenite application on selenium and phytate concentrations in seeds. Journal of the Science of Food and Agriculture. 99:5969-5983.
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2019.
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2017.
Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytologist. Published online..
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In Press.
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2019.
Algae as nutritional and functional food sources: revisiting our understanding. Journal of Applied Phycology. 29:949-982.
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2017.
Allelic diversity of S-RNase alleles in diploid potato species. Theoretical and Applied Genetics. 129:1985-2001.
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2016.
Alperujo extract, hydroxytyrosol, and 3,4-dihydroxyphenylglycol are bioavailable and have antioxidant properties in vitamin e-deficient ratsua proteomics and network analysis approach. Molecular Nutrition and Food Research. 56:1131-1147.
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2012.
Alteration of enzyme activities and functional diversity of a soil contaminated with copper and arsenic. Ecotoxicology and Environmental Safety. 192:ArticleNo.110264.
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2020.
An alternative to radiation hybrid mapping for large-scale genome analysis in barley. Molecular Genetics and Genomics. 274:589-594. Abstract
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2005.
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2019.
Among population differentiation at nuclear genes in native Scots pine (Pinus sylvestris L.) in Scotland. Flora - Morphology, Distribution, Functional Ecology of Plants. 208:79-96.
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2013.
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2014.
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2011.
Analysis of coupled axial and lateral deformation of roots in soil. International Journal for Numerical and Analytical Methods in Geomechanics. 43:684-707.
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2019.
Analysis of ESTs generated from inner bark tissue of an Acacia auriculiformis x Acacia mangium hybrid. Tree Genetics and Genomes. 7:143-152.
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2011.
Analysis of fatty acids and fatty alcohols reveals seasonal and sex-specific changes in the diets of seabirds. Marine Biology. 160:987-999.
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2013.
Analysis of improvements in nitrogen use efficiency associated with 75 years of spring barley breeding. European Journal of Agronomy. 42:49-58.
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2012.
Analysis of RNA silencing in agroinfiltrated leaves of Nicotiana benthamiana and Nicotiana tabacum. Plant Molecular Biology. 59:647-661. Abstract
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2005.
Analysis of root growth from a phenotyping data set using a density-based model. Journal of Experimental Botany. 67:1045-1058.
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2016.
Analysis of root growth from a phenotyping data set using a density-based model. Journal of Experimental Botany.. 67:1045-1058.
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2016.
Analysis of the barley bract suppression gene Trd1. Theoretical and Applied Genetics. 125:33-45.
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2012.
Analytical and decision support tools for genomics-assisted breeding. Trends in Plant Science. 21:354-363.
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2016.
Analyzing lateral root development: how to move forward. The Plant Cell. 24:15-20.
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2012.
Analyzing wildland fire smoke emissions data using compositional data techniques. Journal of Geophysical Research Atmospheres. 125:ArticleNo.e2019JD032128.
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2020.
An ancestral oomycete locus contains late blight avirulence gene Avr3a, encoding a protein that is recognised in the host cytoplasm. Proceedings of the National Academy of Sciences, USA. 102:7766-7771. Abstract
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2005.
Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ). Plant Journal. 76:718-727.
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2013.
Ancient barley landraces adapted to marginal soils demonstrate exceptional tolerance to manganese limitation. Annals of Botany.. 123:831-843.
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2019.
Ancient origin of elicitin gene clusters in Phytophthora genomes. Molecular Biology and Evolution. 23:338-351. Abstract
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2006.
Annual carbon fixation in terrestrial populations of Nostoc commune (Cyanobacteria) from an Antarctic dry valley is driven by temperature regime. Global Change Biology. 13:1224-1237. Abstract
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2007.
Anthropogenic noise as a stressor in animals: a multidisciplinary perspective. International Journal of Comparative Psychology. 20:250-273.
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2007.
Antigen-specific peripheral immune responses are unaltered during normal pregnancy in sheep. Journal of Reproductive Immunology. 77:171-178. Abstract
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2008.
APETALA2 control of barley internode elongation. Development. 146:ArticleNo.dev170373.
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2019.
APETALA2 functions as a temporal factor together with BLADE-ON-PETIOLE2 and MADS29 to control flower and grain development in barley. Development. 148:ArticleNo.dev194894.
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2021.
Application of a sensitive and reproducible label-free proteomic approach to explore the proteome of individual meiotic-phase barley anthers. Frontiers in Plant Science. 10:ArticleNo.393.
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2019.
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2019.
Application of multiple behaviour change models to identify determinants of farmers' biosecurity attitudes and behaviour. Preventive Veterinary Medicine. 115:61-74.
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2018.
Applying pedagogical theories to analyse and understand learning in participatory scenario planning. Futures. 128:ArticleNo.102710.
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2021.
Applying plant genomics to crop improvement. Genome Biology. 8:302-302. Abstract
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2007.
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2014.
Arable plant communities as indicators of farming practice. Agriculture, Ecosystems and Environment. 138:17-26.
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2010.
Arbuscular mycorrhizal fungi stimulate organic P mobilization by changing bacterial community structure in the field. Environmental Microbiology. 20:2639-2651.
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2018.
Are our dynamic water quality models too complex? A comparison of a new parsimonious phosphorus model, SimplyP, and INCA-P Water Resources Research. 53:5382-5399.
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2017.
Aryl hydrocarbon receptor activation during in vitro and in vivo digestion of raw and cooked broccoli (brassica oleracea var.Italica). Food and Function. 11:4026-4037.
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2020.
Ascorbic acid conjugates isolated from the phloem of Cucurbitaceae. Phytochemistry. 69:1850-1858. Abstract
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2008.
Ascorbic acid content of blackcurrant fruit is influenced by both genetic and enviromental factors. Functional Plant Science and Biotechnology. 4:40-52.
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2010.
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2013.
Assessing national nutrition security: The UK reliance on imports to meet population energy and nutrient recommendations. PLoS ONE. 13:ArticleNo.e0192649.
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2018.
Assessing nested hydrological and hydrochemical behaviour of a mesoscale catchment using continuous tracer data. Journal of Hydrology. 336:430-443. Abstract
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2007.
Assessing pig body language: agreement and consistency between pig farmers, veterinarians, and animal activists. Journal of Animal Science. 90:3652-3665.
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2012.
Assessing recovery from acidification of European surface waters in the year 2010: evaluation of projections made with the MAGIC model in 1995. Environmental Science and Technology. 48:13280-13288.
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2014.
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2006.
Assessing the recovery potential of alpine moss-sedge heath: reciprocal transplants along a nitrogen deposition gradient. Environmental Pollution. 159:140-147.
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2011.
Assessing the resilient provision of ecosystem services by social-ecological systems: introduction and theory. Climate Research. 73:7-15.
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2017.
Assessing the vulnerability of the marine bird community in the western North Sea to climate change and other anthropogenic impacts. Marine Ecology Progress Series. 507:277-295.
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2014.
Assessing virulence of vaccine strains of Mycobacterium avium subspecies paratuberculosis in a calf model. Veterinary Microbiology. 146:63-69.
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2010.
Assessing water requirements for irrigated agriculture in Scotland. Water International. 32(1):133-144.
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2008.
Assessment of a large number of empirical plant species niche models by elicitation of knowledge from two national experts. Ecology and Evolution. 9:12858-12868.
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2019.
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2012.
An assessment of engineered log jam structures in response to a flood event in an upland gravel-bed river system. Earth Surface Processes and Landforms. Published online..
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2016.
An assessment of engineered log jam structures in response to a flood event in an upland gravel-bed river system. Earth Surface Processes and Landforms. 41:1658-1670.
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2016.
Assessment of fluorescein-based fluorescent dyes for tracing Neotyphodium endophytes in planta. Mycologia. 105:221-229.
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2013.
An assessment of the fine sediment dynamics in an upland river system: INCA-Sed modifications and implications for fisheries. The Science of the Total Environment. 408(12):2555-2566.
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2010.
An assessment of the multifunctionality of integrated buffer zones in Northwestern Europe. Journal of Environmental Quality. 48:362-375.
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2019.
Assessment of the use of sediment fences for control of erosion and sediment phosphorus loss after potato harvesting on sloping land. Science of the Total Environment. 468-469:1234-1244.
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2014.
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2013.
Associational relationships at multiple spatial scales affect forest damage by moose. Forest Ecology and Management. 348:97-107.
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2015.
Asynchrony among local communities stabilises ecosystem function of metacommunities. Ecology Letters. 20:1534-1545.
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2017.
An atlas of gene expression from seed to seed through barley development. Functional & Integrative Genomics. 6:202-211. Abstract
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2006.
The attack of the clones: tracking the movement of insecticide-resistant peach-potato aphids Myzus persicae (Hemiptera: Aphididae). Bulletin of Entomological Research. 95:483-494. Abstract
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2005.
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2011.
Automated saccharification assay for determination of digestibility in plant materials. Biotechnology for Biofuels. 3:-23.
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2010.
Automatic reconstruction of 3D environment using real terrain data and satellite images. Intelligent Automation and Soft Computing. 18:49-63.
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2012.
Autumnal N storage determines the spring growth, N uptake and N internal cycling of young peach trees. Trees - Structure and Function. 26:393-404.
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2012.
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2020.
Avirulence protein 3a (AVR3a) from the potato pathogen Phytophthora infestans forms homodimers through its predicted translocation region and does not specifically bind phospholipids. Journal of Biological Chemistry. 287:38101-38109.
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2012.
BacHBerry: BACterial Hosts for production of Bioactive phenolics from bERRY fruits. Phytochemistry Reviews. 17:291-326.
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2018.
Bacterial flagella: twist and stick, or dodge across the Kingdoms. PLoS Pathogens.. 11:e1004483.
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2015.
Balancing macronutrient stoichiometry to alleviate eutrophication. Science of the Total Environment. 634:439-447.
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2018.
Balancing the trade-offs between ecological and economic risks in the Great Barrier Reef: a pragmatic conceptual framework. Human and Ecological Risk Assessment.. 18:69-91.
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2012.
Barley anther and meiocyte transcriptome dynamics in meiotic prophase I. Frontiers in Plant Science. 11:ArticleNo.619404.
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2021.
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2014.
Barley grain (1,3;1,4)-beta-glucan content: effects of transcript and sequence variation in genes encoding the corresponding synthase and endohydrolase enzymes. Scientific Reports. 9:ArticleNo.17250.
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2019.
Barley has two peroxisomal ABC transporters with multiple functions in beta-oxidation. Journal of Experimental Botany. 65:4833-4847.
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2014.
Barley necrotic locus nec1 encodes the cyclic nucleotide-gated ion channel 4 homologous to the Arabidopsis HLM1. Molecular Genetics and Genomics. 275:159-168. Abstract
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2006.
Barley SIX-ROWED SPIKE3 encodes a putative Jumonji C-type H3K9me2/me3 demethylase that represses lateral spikelet fertility. Nature Communications. 8:ArticleNo.936.
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2017.
Barley yield formation under abiotic stress depends on the interplay between flowering time genes and environmental cues. Scientific Reports. 9:ArticleNo.6397.
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2019.
Barley: a translational model for adaptation to climate change. New Phytologist. 206:913-931.
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2015.
Barriers to institutional learning and innovations in the forest sector in Europe: Markets, policies and stakeholders. Forest Policy and Economics. 13:124-131.
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2011.
BaRTv1.0: a barley reference transcript dataset for quantitative measurement barley transcriptomes using RNA-seq. BMC Genomics. 20:ArticleNo.968.
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2019.
Baseline health and disease assessment of founder eastern quolls (Dasyurus Viverrinus) during a conservation translocation to mainland Australia. Journal of Wildlife Diseases. 56:547-559.
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2020.
Bats as bushmeat: a global review. Oryx. 43(2):217-234.
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2009.
Bats like vintage: managing exotic eucalypt plantations for bat conservation in a Mediterranean landscape. Animal Conservation. 19:53-64.
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2016.
BAX INHIBITOR-1 is required for full susceptibility of barley to powdery mildew. Molecular Plant-Microbe Interactions. 23:1217-1227.
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2010.
Benchmarking plant diversity of Palaearctic grasslands and other open habitats. Journal of Vegetation Science. 32:ArticleNo.e13050.
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2021.
Benchmarking the predictive capability of hydrological models for river flow and flood peak predictions across a large sample of catchments in Britain. Hydrology and Earth System Sciences. 23:4011-4032.
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2019.
Berry-enriched diet in salt-sensitive hypertensive rats: metabolic fate of (poly)phenols and the role of gut microbiota. Nutrients. 11:ArticleNo.2634.
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2019.
Beyond the black box: promoting mathematical collaborations for elucidating interactions in soil ecology. Ecosphere. 10:ArticleNo.e02799.
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2019.
Bio-fortification of potato tubers using foliar zinc-fertiliser. Journal of Horticultural Science and Biotechnology. 87:123-129.
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2012.
Bioactive berry components: Potential modulators of health benefits. Functional Plant Science and Biotechnology. 4:34-38.
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2010.
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2021.
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2009.
Biofortifying Scottish potatoes with zinc. Plant and Soil. 411:151-165.
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2017.
Biogeochemical impacts of sewage effluents in predominantly rural river catchments are point source inputs distinct to background diffuse pollution. Journal of Environmental Management.
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2022.
BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains. Journal of Biomedical Semantics. 5
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2014.
The biological and physical stability and resilience of a selection of Scottish soils to stresses. European Journal of Soil Science. 58:811-821. Abstract
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2007.
Biological and psychological mediators of the relationships between fat mass, fat-free mass and energy intake. International Journal of Obesity. 43:233-242.
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2019.
Biological approaches to global environmental change: mitigation and remediation. Current Biology. 19:R615-R623.
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2009.
Biomass partitioning and rhizosphere responses of maize and faba bean to phosphorus deficiency. Crop and Pasture Science. 67:847-856.
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2016.
Biopython: freely available Python tools for computational molecular biology and bioinformatics. Bioinformatics. 25:1422-1423.
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2009.
Bioremedial potential of fenamiphos and chlorpyrifos degrading isolates: influence of different environmental conditions. Soil Biology and Biochemistry. 38(9):2682-2693.
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2006.
Biotic homogenization of upland vegetation: patterns and drivers at multiple spatial scales over five decades. Journal of Vegetation Science. 23:755-770.
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2012.
Biotransformation of manganese oxides by fungi: solubilization and production of manganese oxalate biominerals. Environmental Microbiology. 14:1744-1752.
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2012.
Birch invasion of heather moorland increases nematode diversity and trophic complexity. Soil Biology and Biochemistry. 38(12):3421-3430.
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2006.
Botrytis cinerea: the cause of grey mould disease. Molecular Plant Pathology. 8:561-580. Abstract
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2007.
Boundaries of the wolf and the wild: a conceptual examination of the relationship between rewilding and animal reintroduction. Restoration Ecology. 24:27-34.
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2016.
A Brassica exon array for whole-transcript gene expression profiling. PLoS One. 5:-e12812.
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2010.
Breeding histories and selection criteria for oilseed rape in Europe and China identified by genome wide pedigree dissection. Scientific Reports. 7:ArticleNo.1916.
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2017.
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2019.
British Escherichia coli O157 in Cattle Study (BECS): to determine the prevalence of E-coli O157 in herds with cattle destined for the food chain. Epidemiology and Infection. 145:3168-3179.
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2017.
Broad-based resistance to pigeonpea sterility mosaic disease in wild relatives of pigeonpea (Cajanus: Phaseoleae). Annals of Applied Biology. 146:371-379. Abstract
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2005.
Buffering effects of seed banks on plant community diversity in response to land use and climate. Global Ecology and Biogeography. 30:128-139.
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2021.
Burkholderia and Cupriavidus spp. are the preferred symbionts of Mimosa spp. in Southern China. FEMS Microbiology Ecology. 80:417-426.
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2012.
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2006.
Caesium inhibits the colonization of Medicago truncatula by arbuscular mycorrhizal fungi. Journal of Environmental Radioactivity. 141:57-61.
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2015.
Caffeoyl Shikimate Esterase (CSE) is an enzyme in the lignin biosynthetic pathway. Science. 341:1103-1106.
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2013.
Calculation of the compression index and precompression stress from soil compression test data. Soil and Tillage Research. 89:45-57. Abstract
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2006.
Calibrating and testing APSIM for wheat-faba bean pure cultures and intercrops across Europe. Field Crops Research. 264:ArticleNo.108088.
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2021.
Calibrating and testing APSIM for wheat-faba bean pure cultures and intercrops across Europe. Field Crops Research. 264:ArticleNo.108088..
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2021.
Calluna vulgaris-dominated upland heathland sequesters more CO2 annually than grass-dominated upland heathland. Science of the Total Environment.. 505:740-747.
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2015.
Can Hymenoscyphus fraxineus infect hardy members of the Oleaceae other than ash species? Forest Pathology. 45:426-429.
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2015.
Can managers inform models? Integrating local knowledge into models of red deer habitat use Journal of Applied Ecology. 46(2):344-352.
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2009.
Can policy be risk-based? The cultural theory of risk and the case of livestock disease containment Sociologia Ruralis. 55:379-399.
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2015.
Can root electrical capacitance be used to predict root mass in soil? Annals of Botany. 112:457-464.
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2013.
Can scenario-planning support community based natural resource management? Experiences from three countries in Latin America Ecology and Society. 20:ArticleNo.28.
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2015.
Can silencing of transposons contribute to variation in effector gene expression in Phytophthora infestans? Mobile Genetic Elements. 2:110-114.
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2012.
Capability and limitations of a simple grid-based model for simulating land use influences on stream nitrate concentrations. Journal of Hydrology. 507:110-123.
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2013.
Carbon addition reduces labile soil phosphorus by increasing microbial biomass phosphorus in intensive agricultural systems. Soil Use and Management. 36:536-546.
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2020.
The carbon footprints of food crop production. International Journal of Agicultural Sustainability. 7:107-118.
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2009.
Carbon in tundra soils in the Lake Labaz region of arctic Siberia. European Journal of Soil Science. 58(5):1164-1174.
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2007.
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2014.
Catchment microbial dynamics: the emergence of a research agenda. Progress in Physical Geography. 31(1):59-76.
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2007.
Catchment systems engineering: an holistic approach to catchment management. WIRESs Water. :ArticleNo.e1417.
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2020.
Cellular responses to the metal-binding properties of metformin. Diabetes. 61:1423-1433.
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2012.
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2008.
Cereal aphid colony turnover and persistence in winter wheat. PLoS ONE. 9:e106822.
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2014.
Cereal breeding takes a walk on the wild side. Trends in Genetics. 24:24-32. Abstract
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2008.
Cereal variety identification using MALDI-TOF mass spectrometry SNP genotyping. Journal of Cereal Science. 52:356-361.
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2010.
Challenges and opportunities for quantifying roots and rhizosphere interactions through imaging and image analysis. Plant, Cell and Environment. 38:1213-1232.
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2015.
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In Press.
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2018.
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2018.
Challenges to enabling and implementing Natural Flood Management in Scotland. Journal of Flood Risk Management. Published online..
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2017.
Challenges to enabling and implementing Natural Flood Management in Scotland. Journal of Flood Risk Management. 11:S1078-S1089.
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2018.
Changes in growth, internode distance and nutrient concentrations of the seagrass Halophila ovalis with exposure to sediment sulphide. Marine Ecology-Progress Series. 361:83-91. Abstract
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2008.
Changes in pH at the exterior surface of plankton with ocean acidification. Nature Climate Change. 2:510-513.
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2012.
Changing climate and nutrient transfers: Evidence from high temporal resolution concentration-flow dynamics in headwater catchments. Science of the Total Environment. 548:325-339.
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2016.
The changing shape of Scotland's digital divide. European Countryside. 11:563-583.
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2019.
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2005.
Characterisation and pathogenicity of Fusarium taxa isolated from ragwort (Jacobaea vulgaris) roots. Fungal Ecology. 20:186-192.
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2016.
Characterisation of barley landraces from Syria and Jordan for resistance to rhynchosporium and identification of diagnostic markers for Rrs1Rh4. Theoretical and Applied Genetics. 133:1243-1264.
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2020.
Characterisation of barley resistance to rhynchosporium on chromosome 6HS. Theoretical and Applied Genetics. 132:1089-1107.
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2019.
Characterisation of Rhizoctonia solani from potato in Great Britain. Plant Pathology. 56:286-295. Abstract
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2007.
Characterization of 25 tropical hardwoods with Fourier transform infrared,ultraviolet resonance Raman and 13C cross-polarisation magic-angle spinning NMR spectroscopy. Journal of Applied Polymer Science. 102:810-819. Abstract
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2006.
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2018.
Chemical forms and distribution of heavy metals in core sediments from the Gdansk Basin, Baltic Sea. Polish Journal of Environmental Studies. 16:505-515.
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2007.
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2007.
Chlorine disinfection of greywater for reuse: effect of organics and particles. Water Research. 42(1-2):483-491.
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2008.
A chromosome conformation capture ordered sequence of the barley genome. Nature. 544:427-433.
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2017.
A chromosome conformation capture ordered sequence of the barley genome. Nature. 544:427-433.
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2017.
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2015.
Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change. Agricultural Systems. 159:209-224.
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2018.
Clay mineral source tracing and characterisation of Burdekin River (NE Australia) and flood plume fine sediment. Journal of Soils and Sediments. 16:687-706.
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2016.
Clay mineralogy and shale instability: an alternative conceptual analysis. Clay Minerals. 49:127-145.
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2014.
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2016.
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2016.
Clay mineralogy of the Old Red Sandstone and Devonian sedimentary rocks of Wales, Scotland, and England. Clay Minerals. 41(1):433-471.
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2006.