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Xiang Q, Zhu D, Giles M, Neilson R, Yang XR, Qiao M, Chen QL.  2020.  Agricultural activities affect the pattern of the resistome within the phyllosphere microbiome in peri-urban environments. Journal of Hazardous Materials. 382:ArticleNo.121068.
Butterfield BJ, Cavieres LA, Callaway RM, Cook BJ, Kikvidze Z, Lortie CJ, Michalet R, Pugnaire FI, Schoeb C, Xiao S et al..  2013.  Alpine cushion plants inhibit the loss of phylogenetic diversity in severe environments. Ecology Letters. 16:478-486.
Varshney RK, Singh VK, Hickey JM, Xun X, Marshall DF, Wang J, Edwards D, Ribaut JM.  2016.  Analytical and decision support tools for genomics-assisted breeding. Trends in Plant Science. 21:354-363.
Allwood JW, Woznicki TL, Xu Y, Foito A, Aaby K, Sungurtas J, Freitag S, Goodacre R, Stewart D, Rember SF et al..  2019.  Application of HPLC-PDA-MS metabolite profiling to investigate the effect of growth temperature and day length on blackcurrant fruit. Metabolomics. 15:ArticleNo.12.
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Xin GS, Long RJ, Guo XS, Irvine RJ, Ding LM, Ding LL, Shang ZH.  2011.  Blood mineral status of grazing Tibetan sheep in the Northeast of the Qinghai-Tibetan Plateau. Livestock Science. 136:102-107.
Wang XH, Long Y, Wang N, Zou J, Ding GD, Broadley MR, White PJ, Yuan P, Zhang QW, Luo ZL et al..  2017.  Breeding histories and selection criteria for oilseed rape in Europe and China identified by genome wide pedigree dissection. Scientific Reports. 7:ArticleNo.1916.
Liu XY, Wei S, Wang F, James EK, Zagar C, Wang YP, Dong X, Hui T, Xia LG.  2012.  Burkholderia and Cupriavidus spp. are the preferred symbionts of Mimosa spp. in Southern China. FEMS Microbiology Ecology. 80:417-426.
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Vanholme R, Cesarino I, Rataj K, Xiao Y, Sundin L, Goeminne G, Kim H, Cross J, Morreel K, Araujo P et al..  2013.  Caffeoyl Shikimate Esterase (CSE) is an enzyme in the lignin biosynthetic pathway. Science. 341:1103-1106.
Chan FCC, Arain MA, Khomik M, Brodeur JJ, Peichl M, Restrepo-Coupe N, Thorne R, Beamesderfer E, McKenzie S, Xu B et al..  2018.  Carbon, water and energy exchange dynamics of a young pine plantation forest during the initial fourteen years of growth. Forest Ecology and Management. 410:12-26.
Logie L, Harthill J, Patel K, Bacon S, Hamilton DL, Macrae K, McDougall GJ, Wang HH, Xue L, Jiang H et al..  2012.  Cellular responses to the metal-binding properties of metformin. Diabetes. 61:1423-1433.
Asseng S, Martre P, Maiorano A, Rotter RP, O'Leary GJ, Fitzgerald GJ, Girousse C, Motzo R, Giunta F, Babar MA et al..  2019.  Climate change impact and adaptation for wheat protein. Global Change Biology. 25:155-173.
Wang Y, Rashid MAR, Li XP, Yao CG, Lu LL, Bai JM, Li YS, Xu NS, Yang QF, Zhang LH et al..  2019.  Collection and evaluation of genetic diversity and population structure of potato landraces and varieties in China. Frontiers in Plant Science. 10:ArticleNo.139.
Li Q, Ding GD, Yang NM, White PJ, Ye XS, Cai HM, Lu JW, Shi L, Xu FS.  2020.  Comparative genome and transcriptome analysis unravels key factors of nitrogen use efficiency in Brassica napus L. Plant Cell and Environment. 43:712-731.
Duan YF, Duan SG, Armstrong MR, Xu JF, Zheng HJYJ, Chen XW, Hein I, Li GC, Jin LP.  2020.  Comparative transcriptome profiling reveals compatible and incompatible patterns of potato toward phytophthora infestans. G3- Genes Genomes Gemnetics. 10:623-634.
Wang ZC, Liu ZF, Xu KH, Mayer LM, Zhang ZL, Kolker AS, Wu W.  2014.  Concentrations and sources of polycyclic aromatic hydrocarbons in surface coastal sediments of the northern Gulf of Mexico. Geochemical Transactions. 15
Schoeb CS, Callaway RM, Anthelme F, Brooker RW, Cavieres LA, Kikvidze Z, Lortie CJ, Michalet R, Pugnaire FI, Xiao S et al..  2014.  The context dependence of beneficiary feedback effects in plant facilitations. New Phytologist. 204:386-396.
Shu-Yi-Dan Z, Huang F-YH, Xin-Yuan Z, Chenshuo L, Ming-Kang J, Neilson R, Li HL, Jian-Qiang S.  2022.  Conurbation size drives antibiotic resistance along the river. Science of the Total Environment.
Curlevski NJA, Xu Z, Anderson IA, Cairney JWG.  2010.  Converting Australian tropical rainforest to native Araucariaceae plantations alters soil fungal communities. Soil Biology and Biochemistry. 42(1):14-20.
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Zebarth BJ, Tai H, Sainan L, Millard P, De Koyer D, Li XQ, Xiong X.  2011.  Differential gene expression as an indicator of nitrogen sufficiency in field grown potato plants. Plant and Soil. 345:387-400.
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Zebarth BJ, Tai H, Luo SN, Millard P, De Koeyer D, Li XQ, Xiong XY.  2012.  Effect of nitrogen form on gene expression in leaf tissue of greenhouse grown potatoes during three stages of growth. American Journal of Potato Research. 89:315-327.
Le-Yang Y, Shu-Yi-Dan Z, Chen-Shuo L, Xin-Rong H, Neilson R, Yang X-RY.  2022.  Effects of biofertilizer on soil microbial diversity and antibiotic resistance genes. Science of the Total Environment.
Kikvidze Z, Brooker RW, Butterfield BJ, Callaway RM, Cavieres LA, Cook BJ, Lortie CJ, Michalet R, Pugnaire FI, Xiao S et al..  2015.  The effects of foundation species on community assembly: a global study on alpine cushion plant communities. Ecology. 96:2064-2069.
He LY, Lv LX, Pillai SC, Wang HL, Xue JM, Ma YF, Liu YL, Chen YL, Wu L, Zhang ZL et al..  2021.  Efficient degradation of diclofenac sodium by periodate activation using Fe/Cu bimetallic modified sewage sludge biochar/UV system. Science of the Total Environment. 783:ArticleNo.146794.
Shuzhong G, Jenkins A, Gao SJ, Lu Y, Li H, Li Y, Ferrier RC, Bailey M, Wang Y, Zhang Y et al..  2017.  Ensuring water resource security in China; the need for advances in evidence-based policy to support sustainable management. Environmental Science and Policy. 75:65-69.
Zhao G, Hoffman H, Yeluripati J, Xenia S, Nendal C, Coucheney E, Kuhnert M, Tao F, Constantin J, Raynal H et al..  2016.  Evaluating the precision of eight spatial sampling schemes in estimating regional means of simulated yield for two crops. Environmental Modelling and Software. 80:100-112.
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Bagousse-Pinguet LY, Xiao S, Brooker RW, Gross N, Liancourt P, Straile D, Michalet R.  2014.  Facilitation displaces hotspots of diversity and allows communities to persist in heavily stressed and disturbed environments. Journal of Vegetation Science.. 25:66-76.
Cavieres LA, Brooker RW, Butterfield BJ, Cook BJ, Kikvidze Z, Lortie CJ, Michalet R, Pugnaire FI, Schoeb C, Xiao S et al..  2014.  Facilitative plant interactions and climate simultaneously drive alpine plant diversity. Ecology Letters. 17:193-202.
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Milner SG, Jost M, Taketa S, Mazon ER, Himmelbach A, Oppermann M, Weise S, Knupffer H, Basterrechea M, Konig P et al..  2019.  Genebank genomics highlights the diversity of a global barley collection. Nature Genetics.
Milner SG, Jost M, Taketa S, Mazon ER, Himmelbach A, Oppermann M, Weise S, Knupffer H, Basterrechea M, Konig P et al..  2019.  Genebank genomics highlights the diversity of a global barley collection. Nature Genetics.
Xu X, Pan SK, Cheng SF, Zhang B, Mu DS, Ni PX, Zhang GY, Yang S, Li RQ, Wang J et al..  2011.  Genome sequence and analysis of the tuber crop potato. Nature. 475:189-195.
Ho T, Cardle L, Xu X, Bayer M, Prince SJ, Mutava RN, Marshall DF, Syed NH.  2014.  Genome-Tagged Amplification (GTA): a PCR-based method to prepare sample-tagged amplicons from hundreds of individuals for next generation sequencing. Molecular Breeding. 34:977-988.
Xu X, Sharma R, Tondelli A, Russell J, Comadran J, Schnaithmann F, Pillen K, Kilian B, Cattivelli L, Thomas WTB et al..  2018.  Genome-wide association analysis of grain yield-associated traits in a Pan-European barley cultivar collection. Plant Genome. 11:ArticleNo.UNSP170073.
Schoeb C, Michalet R, Cavieres LA, Pugnaire FI, Brooker RW, Butterfield BJ, Cook BJ, Kikvidze Z, Lortie CJ, Xiao S et al..  2014.  A global analysis of bidirectional interactions in alpine plant communities shows facilitators experiencing strong reciprocal fitness costs. New Phytologist. 202:95-105.
Jeger M, Beresford R, Bock C, Brown N, Fox A, Newton AC, Vicent A, Xu X, Yuen J.  2021.  Global challenges facing plant pathology: multidisciplinary approaches to meet the food security and environmental challenges in the mid-21st century. CABI Agriculture and Bioscience. 2:ArticleNo.20.
Komatsu KJ, Avolio ML, Lemoine NP, Isbell F, Grman E, Houseman GR, Koerner SE, Johnson DS, Wilcox KR, Alatalo JM et al..  2019.  Global change effects on plant communities are magnified by time and the number of global change factors imposed. Proceedings of the National Academy of Sciences of the United States of America (PNAS). :ArticleNo.201819027.
Komatsu KJ, Avolio ML, Lemoine NP, Isbell F, Grman E, Houseman GR, Koerner SE, Johnson DS, Wilcox KR, Alatalo JM et al..  2019.  Global change effects on plant communities are magnified by time and the number of global change factors imposed. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 116:17867-17873.
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I
Wang W, Zhang Y, Ding GD, White PJ, Broadley MR, Hammond P, Jin K, Cai HM, Xu FS, Shi L.  2019.  Identification of QTLs for relative root traits associated with phosphorus efficiency in two culture systems in Brassica napus. Euphytica. 215:ArticleNo.192.
Han H, Hou J, Huang M, Li Z, Xu K, Zhang D, Bai WGC.  2020.  Impact of soil and water conservation measures and precipitation on streamflow in the middle and lower reaches of the Hulu River Basin, China. Catena. 195:ArticleNo.104792.
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M
Wang W, Ding GD, White PJ, Wang XH, Jin KM, Xu FS, Shi L.  2019.  Mapping and cloning of quantitative trait loci for phosphorus efficiency in crops: opportunities and challenges. Plant and Soil. 439:91-112.
Fan F, Yu B, Wang B, George TS, Yin H, Xu D, Li D, Song A.  2019.  Microbial mechanisms of the contrast residue decomposition and priming effect in soils with different organic and chemical fertilization histories. Soil Biology and Biochemistry. 135:213-221.
Xiong W, Matthews R, Holman I, Lin E, Xu Y.  2007.  Modelling China's potential maize production at regional scale under climate change. Climatic Change. 85(3-4):433-451.
N
Zheng JY, Duan SG, Armstrong MR, Duan YF, Xu JF, Chen XW, Hein I, Jin LP, Li GC.  2020.  New findings on the resistance mechanism of an elite diploid wild potato species JAM1-4 in response to a super race strain of Phytophthora infestans. Phytopathology. 110:1375-1387.
Zhang H, Liu YX, Xu Y, Chapman SN, Love AJ, Xia T.  2012.  A newly isolated Na+/H+ antiporter gene, DmNHX1, confers salt tolerance when expressed transiently in Nicotiana benthamiana or stably in Arabidopsis thaliana. Plant Cell Tissue and Organ Culture. 110:189-200.
Xiao H, Hourihan JM, Brown LJ, McMahon M, Stewart D, Hayes JD.  2011.  Nrf2-mediated induction of antioxidant response element-driven gene expression by flavonoids is dependent on their chemical structure. Toxicology. 290:126-127.
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AlRabiah H, Allwood JW, Correa E, Xu Y, Goodacre R.  2018.  pH plays a role in the mode of action of trimethoprim on Escherichia coli. PLoS ONE. 13:ArticleNo.e0200272.
Ollerton J, Trunschke J, Havens K, Landaverde-González P, Keller A, Gilpin A, Rech A, Baronio G, Phillips B, Mackin C et al..  2022.  Pollinator-flower interactions in gardens during the COVID19 pandemic lockdown of 2020. Journal of Pollination Ecology.
Jiang R, Li JC, Tian ZD, Du J, Armstrong M, Baker K, Lim JTY, Vossen JH, He H, Portal L et al..  2018.  Potato late blight field resistance from QTL dPI09c is conferred by the NB-LRR gene R8. Journal of Experimental Botany. 69:1545-1555.
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Zhang Y, Thomas CL, Xiang JX, Long Y, Wang XH, Zou J, Luo ZL, Ding GD, Cai HM, Graham NS et al..  2016.  QTL meta-analysis of root traits in Brassica napus under contrasting phosphorus supply in two growth systems. Scientific Reports. 6
R
Allwood JW, Xu Y, Martinez-Martin P, Palau R, Cowan A, Goodacre R, Marshall A, Stewart D, Howarth C.  2019.  Rapid UHPLC-MS metabolite profiling and phenotypic assays reveal genotypic impacts of nitrogen supplementation in oats. Metabolomics. 15:ArticleNo.42..
Chen WR, Zhang ZL, Li XK, Wu D, Xue Y, Li LS.  2018.  Reducing DBPs formation in chlorination of Br-containing Diclofenac via Fe-Cu-MCM-41/O-3 peroxidation: Efficiency, characterization DBPs precursors and mechanism. Journal of the Taiwan Institute of Chemical Engineers. 84:212-221.
Yang L, Xue JM, He LY, Wu L, Ma YF, Chen H, Li H, Peng P, Zhang ZL.  2019.  Review on ultrasound assisted persulfate degradation of organic contaminants in wastewater: Influences, mechanisms and prospective. Chemical Engineering Journal. 378:ArticleNo.UNSP122146.
Bastias BA, Anderson IC, Xu Z, Cairney WG.  2007.  RNA- and DNA-based profiling of soil fungal communities in a native Australian eucalypt forest and adjacent Pinus elliotti plantation. Soil Biology and Biochemistry. 39(12):3108-3114.
S
Luo S, Tai H, Zebarth B, Li XQ, Millard P, De Koeyer D, Xiong X.  2011.  Sample collection protocol effects on quantification of gene expression in potato leaf tissue. Plant Molecular Biology Reporter. 29:369-378.
Xiang Q, Qiao M, Zhu D, Giles M, Neilson R, Yang XR, Zhu YG, Chen QL.  2021.  Seasonal change is a major driver of soil resistomes at a watershed scale. Isme Communications. 1:ArticleNo.1.
Shedayi AA, Xu M, Gonalez-Redin J, Hagist SCN, Aslam S, Khan N.  2019.  Spatiotemporal assessment and valuation of provisioning ecosystem services of Pakistan. Applied Ecology and Environmental Research. 17:6735-6759.
Tondelli A, Xu X, Moragues M, Sharma R, Schnaithmann F, Ingvardsen C, Manninen O, Comadran J, Russell J, Waugh R et al..  2013.  Structural and temporal variation in genetic diversity of European spring two-row barley cultivars and association mapping of quantitative traits. Plant Genome. 6
Ollerton J, Trunschke J, Havens K, Landaverde-González P, Keller A, Gilpin A, Rech A, Baronio G, Phillips B, Mackin C et al..  2022.  A systematic review of methods for studying the impacts of outdoor recreation on terrestrial wildlife. Global Ecology and Conservation. 22:ArticleNo.e00917.
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Jones HG, Serraj R, Loveys BR, Xiong LH, Wheaton A, Price AH.  2009.  Thermal infrared imaging of crop canopies for the remote diagnosis and quantification of plant responses to water stress in the field.. Functional Plant Biology. 36:978-989.
Mueller LA, Tanksley SD, Giovannoni JJ, van Eck J, Stack S, Choi D, Kim BD, Chen M, Cheng Z, Li C et al..  2005.  The tomato sequencing project, the first cornerstone of the international Solanaceae project (SOL). Comparative and Functional Genomics. 6:153-158. Abstract
Armstrong MR, Vossen J, Lim TY, Hutten RCB, Xu J, Strachan SM, Harrower B, Champouret N, Gilroy EM, Hein I.  In Press.  Tracking disease resistance deployment in potato breeding by enrichment sequencing. New Phytologist. Published online..
Armstrong MR, Vossen J, Lim TY, Hutten RCB, Xu JF, Strachan SM, Harrower B, Champouret N, Gilroy EM, Hein I.  2019.  Tracking disease resistance deployment in potato breeding by enrichment sequencing. Plant Biotechnology Journal. 17:540-549.
Blöschl G, Bierkens MFP, Chambel A, Cudennec C, Destouni G, Fiori A, Kirchner JW, McDonnell J, Savenije HHG, Sivapalan M et al..  2019.  Twenty three unsolved problems in hydrology (UPH) - a community perspective. Hydrological Sciences Journal.. 64:1141-1158.
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He Q, McLellan H, Boevink PC, Sadanandom A, Xie CH, Birch PRJ, Tian ZD.  2015.  U-box E3 ubiquitin ligase PUB17 acts in the nucleus to promote specific immune pathways triggered by Phytophthora infestans. Journal of Experimental Botany. 66:3189-3199.
Kattas GD, Perez-Barberia FJ, Small M, Xu XK, Walker DM.  2013.  Unravelling complexity in inter-species interaction through nonlinear dynamical models. Acta Ethologica. 16:21-30.
Luo S, Wei Z, Spinney R, Zhang Z, Dionysiou DD, Gao L, Chai L, Wang D, Xiao R.  2018.  UV direct photolysis of sulfamethoxazole and ibuprofen: An experimental and modelling study. Journal of Hazerdous Materials. 343:132-139.
Luo S, Wei Z, Spinney R, Zhang Z, Dionysiou DD, Gao L, Chai L, Wang D, Xiao R.  2018.  UV direct photolysis of sulfamethoxazole and ibuprofen: An experimental and modelling study. Journal of Hazardous Materials. 343:132-139.
Yang L, He LY, Xue JM, Ma YF, Shi Y, Wu L, Zhang ZL.  2020.  UV/SO32- based advanced reduction processes of aqueous contaminants: Current status and prospects. Chemical Engineering Journal. 397:ArticleNo.125412.
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Wang JM, Lin H, Sun WC, Xia Y, Ma JW, Fu JR, Zhang ZL, Wu HZ, Qian MR.  2016.  Variations in the fate and biological effects of sulfamethoxazole, norfloxacin and doxycycline in different vegetable-soil systems following manure application. Journal of Hazardous Materials, 304, 49-57..

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.