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Found 77 results

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2005
Mueller LA, Tanksley SD, Giovannoni JJ, van Eck J, Stack S, Choi D, Kim BD, Chen M, Cheng Z, Li C et al..  2005.  The tomato sequencing project, the first cornerstone of the international Solanaceae project (SOL). Comparative and Functional Genomics. 6:153-158. Abstract
2007
Xiong W, Matthews R, Holman I, Lin E, Xu Y.  2007.  Modelling China's potential maize production at regional scale under climate change. Climatic Change. 85(3-4):433-451.
Bastias BA, Anderson IC, Xu Z, Cairney WG.  2007.  RNA- and DNA-based profiling of soil fungal communities in a native Australian eucalypt forest and adjacent Pinus elliotti plantation. Soil Biology and Biochemistry. 39(12):3108-3114.
2009
Xu Y, Masui T.  2009.  Local air pollutant emission reduction and ancillary carbon benefits of SO2 control policies: Application of AIM/CGE model to China. European Journal of Operational Research. 198(1):315-325.
Jones HG, Serraj R, Loveys BR, Xiong LH, Wheaton A, Price AH.  2009.  Thermal infrared imaging of crop canopies for the remote diagnosis and quantification of plant responses to water stress in the field.. Functional Plant Biology. 36:978-989.
2010
Curlevski NJA, Xu Z, Anderson IA, Cairney JWG.  2010.  Converting Australian tropical rainforest to native Araucariaceae plantations alters soil fungal communities. Soil Biology and Biochemistry. 42(1):14-20.
2011
Xin GS, Long RJ, Guo XS, Irvine RJ, Ding LM, Ding LL, Shang ZH.  2011.  Blood mineral status of grazing Tibetan sheep in the Northeast of the Qinghai-Tibetan Plateau. Livestock Science. 136:102-107.
Zebarth BJ, Tai H, Sainan L, Millard P, De Koyer D, Li XQ, Xiong X.  2011.  Differential gene expression as an indicator of nitrogen sufficiency in field grown potato plants. Plant and Soil. 345:387-400.
Xu X, Pan SK, Cheng SF, Zhang B, Mu DS, Ni PX, Zhang GY, Yang S, Li RQ, Wang J et al..  2011.  Genome sequence and analysis of the tuber crop potato. Nature. 475:189-195.
Xiao H, Hourihan JM, Brown LJ, McMahon M, Stewart D, Hayes JD.  2011.  Nrf2-mediated induction of antioxidant response element-driven gene expression by flavonoids is dependent on their chemical structure. Toxicology. 290:126-127.
Luo S, Tai H, Zebarth B, Li XQ, Millard P, De Koeyer D, Xiong X.  2011.  Sample collection protocol effects on quantification of gene expression in potato leaf tissue. Plant Molecular Biology Reporter. 29:369-378.
2012
Liu XY, Wei S, Wang F, James EK, Zagar C, Wang YP, Dong X, Hui T, Xia LG.  2012.  Burkholderia and Cupriavidus spp. are the preferred symbionts of Mimosa spp. in Southern China. FEMS Microbiology Ecology. 80:417-426.
Xu Y.  2012.  Carbon tax or cap-and-trade: a computable general equilibrium analysis of Chinese economy. EconModels, March 2012..
Logie L, Harthill J, Patel K, Bacon S, Hamilton DL, Macrae K, McDougall GJ, Wang HH, Xue L, Jiang H et al..  2012.  Cellular responses to the metal-binding properties of metformin. Diabetes. 61:1423-1433.
Zebarth BJ, Tai H, Luo SN, Millard P, De Koeyer D, Li XQ, Xiong XY.  2012.  Effect of nitrogen form on gene expression in leaf tissue of greenhouse grown potatoes during three stages of growth. American Journal of Potato Research. 89:315-327.
Zhang H, Liu YX, Xu Y, Chapman SN, Love AJ, Xia T.  2012.  A newly isolated Na+/H+ antiporter gene, DmNHX1, confers salt tolerance when expressed transiently in Nicotiana benthamiana or stably in Arabidopsis thaliana. Plant Cell Tissue and Organ Culture. 110:189-200.
2013
Butterfield BJ, Cavieres LA, Callaway RM, Cook BJ, Kikvidze Z, Lortie CJ, Michalet R, Pugnaire FI, Schoeb C, Xiao S et al..  2013.  Alpine cushion plants inhibit the loss of phylogenetic diversity in severe environments. Ecology Letters. 16:478-486.
Vanholme R, Cesarino I, Rataj K, Xiao Y, Sundin L, Goeminne G, Kim H, Cross J, Morreel K, Araujo P et al..  2013.  Caffeoyl Shikimate Esterase (CSE) is an enzyme in the lignin biosynthetic pathway. Science. 341:1103-1106.
Shi L, Shi TX, Broadley MR, White PJ, Long Y, Meng JL, Xu FS, Hammond JP.  2013.  High-throughput root phenotyping screens identify genetic loci associated with root architectural traits in Brassica napus under contrasting phosphate availabilities. Annals of Botany. 112:381-389.
Xiao H, Lü F, Stewart D, Zhang Y.  2013.  Mechanisms underlying chemopreventive effects of flavonoids via multiple signaling nodels within Nrf2-ARE and AhR0XRE gene regulatory networks. Current Chemical Biology. 7:151-176.
Tondelli A, Xu X, Moragues M, Sharma R, Schnaithmann F, Ingvardsen C, Manninen O, Comadran J, Russell J, Waugh R et al..  2013.  Structural and temporal variation in genetic diversity of European spring two-row barley cultivars and association mapping of quantitative traits. Plant Genome. 6
Lu JK, Kang LH, Sprent JI, Xu DP, He XH.  2013.  Two-way transfer of nitrogen between Dalbergia odorifera and its hemiparasite Santalum album is enhanced when the host is effectively nodulated and fixing nitrogen. Tree Physiology. 33:464-474.
Kattas GD, Perez-Barberia FJ, Small M, Xu XK, Walker DM.  2013.  Unravelling complexity in inter-species interaction through nonlinear dynamical models. Acta Ethologica. 16:21-30.
2014
Wang ZC, Liu ZF, Xu KH, Mayer LM, Zhang ZL, Kolker AS, Wu W.  2014.  Concentrations and sources of polycyclic aromatic hydrocarbons in surface coastal sediments of the northern Gulf of Mexico. Geochemical Transactions. 15
Schoeb CS, Callaway RM, Anthelme F, Brooker RW, Cavieres LA, Kikvidze Z, Lortie CJ, Michalet R, Pugnaire FI, Xiao S et al..  2014.  The context dependence of beneficiary feedback effects in plant facilitations. New Phytologist. 204:386-396.
Bagousse-Pinguet LY, Xiao S, Brooker RW, Gross N, Liancourt P, Straile D, Michalet R.  2014.  Facilitation displaces hotspots of diversity and allows communities to persist in heavily stressed and disturbed environments. Journal of Vegetation Science.. 25:66-76.
Cavieres LA, Brooker RW, Butterfield BJ, Cook BJ, Kikvidze Z, Lortie CJ, Michalet R, Pugnaire FI, Schoeb C, Xiao S et al..  2014.  Facilitative plant interactions and climate simultaneously drive alpine plant diversity. Ecology Letters. 17:193-202.
Ho T, Cardle L, Xu X, Bayer M, Prince SJ, Mutava RN, Marshall DF, Syed NH.  2014.  Genome-Tagged Amplification (GTA): a PCR-based method to prepare sample-tagged amplicons from hundreds of individuals for next generation sequencing. Molecular Breeding. 34:977-988.
Schoeb C, Michalet R, Cavieres LA, Pugnaire FI, Brooker RW, Butterfield BJ, Cook BJ, Kikvidze Z, Lortie CJ, Xiao S et al..  2014.  A global analysis of bidirectional interactions in alpine plant communities shows facilitators experiencing strong reciprocal fitness costs. New Phytologist. 202:95-105.
2015
Kikvidze Z, Brooker RW, Butterfield BJ, Callaway RM, Cavieres LA, Cook BJ, Lortie CJ, Michalet R, Pugnaire FI, Xiao S et al..  2015.  The effects of foundation species on community assembly: a global study on alpine cushion plant communities. Ecology. 96:2064-2069.
He Q, McLellan H, Boevink PC, Sadanandom A, Xie CH, Birch PRJ, Tian ZD.  2015.  U-box E3 ubiquitin ligase PUB17 acts in the nucleus to promote specific immune pathways triggered by Phytophthora infestans. Journal of Experimental Botany. 66:3189-3199.
2016
Varshney RK, Singh VK, Hickey JM, Xun X, Marshall DF, Wang J, Edwards D, Ribaut JM.  2016.  Analytical and decision support tools for genomics-assisted breeding. Trends in Plant Science. 21:354-363.
Zhao G, Hoffman H, Yeluripati J, Xenia S, Nendal C, Coucheney E, Kuhnert M, Tao F, Constantin J, Raynal H et al..  2016.  Evaluating the precision of eight spatial sampling schemes in estimating regional means of simulated yield for two crops. Environmental Modelling and Software. 80:100-112.
Giles CD, Isles PDF, Manley T, Xu YY, Druschel GK, Schroth AW.  2016.  The mobility of phosphorus, iron, and manganese through the sediment-water continuum of a shallow eutrophic freshwater lake under stratified and mixed water-column conditions. Biogeochemistry. 127:15-34.
Zhang Y, Thomas CL, Xiang JX, Long Y, Wang XH, Zou J, Luo ZL, Ding GD, Cai HM, Graham NS et al..  2016.  QTL meta-analysis of root traits in Brassica napus under contrasting phosphorus supply in two growth systems. Scientific Reports. 6
Wang JM, Lin H, Sun WC, Xia Y, Ma JW, Fu JR, Zhang ZL, Wu HZ, Qian MR.  2016.  Variations in the fate and biological effects of sulfamethoxazole, norfloxacin and doxycycline in different vegetable-soil systems following manure application. Journal of Hazardous Materials, 304, 49-57..
2017
Wang XH, Long Y, Wang N, Zou J, Ding GD, Broadley MR, White PJ, Yuan P, Zhang QW, Luo ZL et al..  2017.  Breeding histories and selection criteria for oilseed rape in Europe and China identified by genome wide pedigree dissection. Scientific Reports. 7:ArticleNo.1916.
Shuzhong G, Jenkins A, Gao SJ, Lu Y, Li H, Li Y, Ferrier RC, Bailey M, Wang Y, Zhang Y et al..  2017.  Ensuring water resource security in China; the need for advances in evidence-based policy to support sustainable management. Environmental Science and Policy. 75:65-69.
2018
Chan FCC, Arain MA, Khomik M, Brodeur JJ, Peichl M, Restrepo-Coupe N, Thorne R, Beamesderfer E, McKenzie S, Xu B et al..  2018.  Carbon, water and energy exchange dynamics of a young pine plantation forest during the initial fourteen years of growth. Forest Ecology and Management. 410:12-26.
Xu X, Sharma R, Tondelli A, Russell J, Comadran J, Schnaithmann F, Pillen K, Kilian B, Cattivelli L, Thomas WTB et al..  2018.  Genome-wide association analysis of grain yield-associated traits in a Pan-European barley cultivar collection. Plant Genome. 11:ArticleNo.UNSP170073.
Wang X, Xue DBJ, Qin LXL, Chi Y, Jones JT, Li H.  2018.  A novel Meloidogyne incognita chorismate mutase effector suppresses plant immunity by manipulating the salicylic acid pathway and functions mainly during the early stages of nematode parasitism. Plant Pathology. 67:1436-1448.
AlRabiah H, Allwood JW, Correa E, Xu Y, Goodacre R.  2018.  pH plays a role in the mode of action of trimethoprim on Escherichia coli. PLoS ONE. 13:ArticleNo.e0200272.
Jiang R, Li JC, Tian ZD, Du J, Armstrong M, Baker K, Lim JTY, Vossen JH, He H, Portal L et al..  2018.  Potato late blight field resistance from QTL dPI09c is conferred by the NB-LRR gene R8. Journal of Experimental Botany. 69:1545-1555.
Chen WR, Zhang ZL, Li XK, Wu D, Xue Y, Li LS.  2018.  Reducing DBPs formation in chlorination of Br-containing Diclofenac via Fe-Cu-MCM-41/O-3 peroxidation: Efficiency, characterization DBPs precursors and mechanism. Journal of the Taiwan Institute of Chemical Engineers. 84:212-221.
Luo S, Wei Z, Spinney R, Zhang Z, Dionysiou DD, Gao L, Chai L, Wang D, Xiao R.  2018.  UV direct photolysis of sulfamethoxazole and ibuprofen: An experimental and modelling study. Journal of Hazerdous Materials. 343:132-139.
Luo S, Wei Z, Spinney R, Zhang Z, Dionysiou DD, Gao L, Chai L, Wang D, Xiao R.  2018.  UV direct photolysis of sulfamethoxazole and ibuprofen: An experimental and modelling study. Journal of Hazardous Materials. 343:132-139.
2019
Allwood JW, Woznicki TL, Xu Y, Foito A, Aaby K, Sungurtas J, Freitag S, Goodacre R, Stewart D, Rember SF et al..  2019.  Application of HPLC-PDA-MS metabolite profiling to investigate the effect of growth temperature and day length on blackcurrant fruit. Metabolomics. 15:ArticleNo.12.
Asseng S, Martre P, Maiorano A, Rotter RP, O'Leary GJ, Fitzgerald GJ, Girousse C, Motzo R, Giunta F, Babar MA et al..  2019.  Climate change impact and adaptation for wheat protein. Global Change Biology. 25:155-173.
Wang Y, Rashid MAR, Li XP, Yao CG, Lu LL, Bai JM, Li YS, Xu NS, Yang QF, Zhang LH et al..  2019.  Collection and evaluation of genetic diversity and population structure of potato landraces and varieties in China. Frontiers in Plant Science. 10:ArticleNo.139.
Milner SG, Jost M, Taketa S, Mazon ER, Himmelbach A, Oppermann M, Weise S, Knupffer H, Basterrechea M, Konig P et al..  2019.  Genebank genomics highlights the diversity of a global barley collection. Nature Genetics.
Milner SG, Jost M, Taketa S, Mazon ER, Himmelbach A, Oppermann M, Weise S, Knupffer H, Basterrechea M, Konig P et al..  2019.  Genebank genomics highlights the diversity of a global barley collection. Nature Genetics.
Komatsu KJ, Avolio ML, Lemoine NP, Isbell F, Grman E, Houseman GR, Koerner SE, Johnson DS, Wilcox KR, Alatalo JM et al..  2019.  Global change effects on plant communities are magnified by time and the number of global change factors imposed. Proceedings of the National Academy of Sciences of the United States of America (PNAS). :ArticleNo.201819027.
Komatsu KJ, Avolio ML, Lemoine NP, Isbell F, Grman E, Houseman GR, Koerner SE, Johnson DS, Wilcox KR, Alatalo JM et al..  2019.  Global change effects on plant communities are magnified by time and the number of global change factors imposed. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 116:17867-17873.
Wang W, Zhang Y, Ding GD, White PJ, Broadley MR, Hammond P, Jin K, Cai HM, Xu FS, Shi L.  2019.  Identification of QTLs for relative root traits associated with phosphorus efficiency in two culture systems in Brassica napus. Euphytica. 215:ArticleNo.192.
Wang W, Ding GD, White PJ, Wang XH, Jin KM, Xu FS, Shi L.  2019.  Mapping and cloning of quantitative trait loci for phosphorus efficiency in crops: opportunities and challenges. Plant and Soil. 439:91-112.
Fan F, Yu B, Wang B, George TS, Yin H, Xu D, Li D, Song A.  2019.  Microbial mechanisms of the contrast residue decomposition and priming effect in soils with different organic and chemical fertilization histories. Soil Biology and Biochemistry. 135:213-221.
Allwood JW, Xu Y, Martinez-Martin P, Palau R, Cowan A, Goodacre R, Marshall A, Stewart D, Howarth C.  2019.  Rapid UHPLC-MS metabolite profiling and phenotypic assays reveal genotypic impacts of nitrogen supplementation in oats. Metabolomics. 15:ArticleNo.42..
Yang L, Xue JM, He LY, Wu L, Ma YF, Chen H, Li H, Peng P, Zhang ZL.  2019.  Review on ultrasound assisted persulfate degradation of organic contaminants in wastewater: Influences, mechanisms and prospective. Chemical Engineering Journal. 378:ArticleNo.UNSP122146.
Shedayi AA, Xu M, Gonalez-Redin J, Hagist SCN, Aslam S, Khan N.  2019.  Spatiotemporal assessment and valuation of provisioning ecosystem services of Pakistan. Applied Ecology and Environmental Research. 17:6735-6759.
Armstrong MR, Vossen J, Lim TY, Hutten RCB, Xu JF, Strachan SM, Harrower B, Champouret N, Gilroy EM, Hein I.  2019.  Tracking disease resistance deployment in potato breeding by enrichment sequencing. Plant Biotechnology Journal. 17:540-549.
Blöschl G, Bierkens MFP, Chambel A, Cudennec C, Destouni G, Fiori A, Kirchner JW, McDonnell J, Savenije HHG, Sivapalan M et al..  2019.  Twenty three unsolved problems in hydrology (UPH) - a community perspective. Hydrological Sciences Journal.. 64:1141-1158.
2020
Xiang Q, Zhu D, Giles M, Neilson R, Yang XR, Qiao M, Chen QL.  2020.  Agricultural activities affect the pattern of the resistome within the phyllosphere microbiome in peri-urban environments. Journal of Hazardous Materials. 382:ArticleNo.121068.
Li Q, Ding GD, Yang NM, White PJ, Ye XS, Cai HM, Lu JW, Shi L, Xu FS.  2020.  Comparative genome and transcriptome analysis unravels key factors of nitrogen use efficiency in Brassica napus L. Plant Cell and Environment. 43:712-731.
Duan YF, Duan SG, Armstrong MR, Xu JF, Zheng HJYJ, Chen XW, Hein I, Li GC, Jin LP.  2020.  Comparative transcriptome profiling reveals compatible and incompatible patterns of potato toward phytophthora infestans. G3- Genes Genomes Gemnetics. 10:623-634.
Yang L, Li H, Xue JM, He LY, Ma YF, Wu L, Zhang ZL.  2020.  Hydrothermal enhanced nanoscale zero-valent iron activated peroxydisulfate oxidation of chloramphenicol in aqueous solutions: Fe-speciation analysis and modeling optimization. Water. 12:ArticleNo.131.
Han H, Hou J, Huang M, Li Z, Xu K, Zhang D, Bai WGC.  2020.  Impact of soil and water conservation measures and precipitation on streamflow in the middle and lower reaches of the Hulu River Basin, China. Catena. 195:ArticleNo.104792.
Zheng JY, Duan SG, Armstrong MR, Duan YF, Xu JF, Chen XW, Hein I, Jin LP, Li GC.  2020.  New findings on the resistance mechanism of an elite diploid wild potato species JAM1-4 in response to a super race strain of Phytophthora infestans. Phytopathology. 110:1375-1387.
Mazzola V, Perks MP, Smith J, Yeluripati J, Xenakis G.  2020.  Seasonal patterns of greenhouse gas emissions from a forest-to-bog restored site in northern Scotland: Influence of microtopography and vegetation on carbon dioxide and methane dynamics. European Journal of Soil Science.
Yang L, He LY, Xue JM, Ma YF, Shi Y, Wu L, Zhang ZL.  2020.  UV/SO32- based advanced reduction processes of aqueous contaminants: Current status and prospects. Chemical Engineering Journal. 397:ArticleNo.125412.
2021
He LY, Lv LX, Pillai SC, Wang HL, Xue JM, Ma YF, Liu YL, Chen YL, Wu L, Zhang ZL et al..  2021.  Efficient degradation of diclofenac sodium by periodate activation using Fe/Cu bimetallic modified sewage sludge biochar/UV system. Science of the Total Environment. 783:ArticleNo.146794.
Jeger M, Beresford R, Bock C, Brown N, Fox A, Newton AC, Vicent A, Xu X, Yuen J.  2021.  Global challenges facing plant pathology: multidisciplinary approaches to meet the food security and environmental challenges in the mid-21st century. CABI Agriculture and Bioscience. 2:ArticleNo.20.
Xiang Q, Qiao M, Zhu D, Giles M, Neilson R, Yang XR, Zhu YG, Chen QL.  2021.  Seasonal change is a major driver of soil resistomes at a watershed scale. Isme Communications. 1:ArticleNo.1.
2022
Shu-Yi-Dan Z, Huang F-YH, Xin-Yuan Z, Chenshuo L, Ming-Kang J, Neilson R, Li HL, Jian-Qiang S.  2022.  Conurbation size drives antibiotic resistance along the river. Science of the Total Environment.
Le-Yang Y, Shu-Yi-Dan Z, Chen-Shuo L, Xin-Rong H, Neilson R, Yang X-RY.  2022.  Effects of biofertilizer on soil microbial diversity and antibiotic resistance genes. Science of the Total Environment.
Ollerton J, Trunschke J, Havens K, Landaverde-González P, Keller A, Gilpin A, Rech A, Baronio G, Phillips B, Mackin C et al..  2022.  Pollinator-flower interactions in gardens during the COVID19 pandemic lockdown of 2020. Journal of Pollination Ecology.
Ollerton J, Trunschke J, Havens K, Landaverde-González P, Keller A, Gilpin A, Rech A, Baronio G, Phillips B, Mackin C et al..  2022.  A systematic review of methods for studying the impacts of outdoor recreation on terrestrial wildlife. Global Ecology and Conservation. 22:ArticleNo.e00917.
In Press
Armstrong MR, Vossen J, Lim TY, Hutten RCB, Xu J, Strachan SM, Harrower B, Champouret N, Gilroy EM, Hein I.  In Press.  Tracking disease resistance deployment in potato breeding by enrichment sequencing. New Phytologist. Published online..

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.