Publications list
Filters: First Letter Of Last Name is Y [Clear All Filters]
β-Rhizobia from Mimosa pigra, a newly discovered invasive plant in Taiwan. New Phytologist. 168:661-675. Abstract
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2005.
Whole-systems analysis of environmental and economic sustainability in arable cropping systems: a case study. Agronomy. 9:ArticleNo.438.
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2019.
Who knows best? Understanding the use of research-based knowledge in conservation conflicts Journal of Environmental Management. 231:1065-1075.
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2019.
When facilitation meets clonal integration in forest canopies. New Phytologist. 225:135-142.
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2019.
When facilitation meets clonal integration in forest canopies. New Phytologist. 225:135-142.
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2019.
Virus-like particle facilitated deposition of hydroxyapatite bone mineral on nanocellulose after exposure to phosphate and calcium precursors. International Journal of Molecular Sciences. 20:ArticleNo.1814..
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2019.
Virtual water flows under projected climate, land use and population change: the case of UK feed barley and meat. Heliyon. 6:ArticleNo.e03127.
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2020.
Vertical distribution of antibiotic resistance genes in an urban green façade. Environment International. 152:ArticleNo.106502.
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2021.
Variation in Capsella (shepherd's purse): an example of intraspecific functional diversity. Physiologia Plantarum. 129:542-554. Abstract
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2007.
Variability of effects of spatial climate data aggregation on regional yield simulation by crop models. Climate Research. 65:53-69.
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2015.
Validating the alkane pair technique to estimate dry matter intake in equids. Journal of Agricultural Science. 145:273-281.
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2007.
UV/SO32- based advanced reduction processes of aqueous contaminants: Current status and prospects. Chemical Engineering Journal. 397:ArticleNo.125412.
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2020.
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2014.
Urbanization, rural development and environmental health in China. Environmental Development. 28:101-110.
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2018.
Urban geochemistry: research strategies to assist risk assessment and remediation of brownfield sites in urban areas. Environmental Geochemistry and Health. 30:565-576.
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2008.
The unfolded protein response and programmed cell death are induced by expression of garlic virus X p11 in Nicotiana benthamiana. Journal of General Virology. 97:1462-1468.
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2016.
Understanding mental constructs of biodiversity - implications for biodiversity management and conservation. Biological Conservation. 136(2):271-282.
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2007.
Twenty three unsolved problems in hydrology (UPH) - a community perspective. Hydrological Sciences Journal.. 64:1141-1158.
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2019.
Treatment of organic resources before soil incorporation in semi-arid regions improves resilience to El Nino, and increases crop production and economic returns. Environmental Research Letters. 14:ArticleNo.085004.
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2019.
Transcriptional changes in teladorsagia circumcincta upon encountering host tissue of differing immune status. Parasitology. 139:387-405.
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2012.
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2016.
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2008.
Three-dimensional microorganisation of the soil-root-microbe system. Microbial Ecology. 52:151-158. Abstract
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2006.
A theory of associating food types with their post-ingestive consequences. American Naturalist. 167(5):705-716.
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2006.
The temporal structure of feeding behaviour. American Journal of Physiology - Regulatory, Integrative and Comparative Physiology. 301:R378-R393.
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2011.
Temperature modulating sand-consolidating cyanobacterial biomass, nutrients removal and bacterial community dynamics in municipal wastewater. Bioresource Technology. 301:ArticleNo.122758.
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2020.
Teladorsagia circumcincta: The transcriptomic response of a multi-drug-resistant isolate to ivermectin exposure in vitro. Experimental Parasitology. 127:351-356.
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2011.
Tea plantation affects soil nitrogen transformations in subtropical China. Journal of Soils and Sediments..
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2020.
Tea plantation affects soil nitrogen transformations in subtropical China. Journal of Soils and Sediments. 21:441-451.
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2021.
Systems approaches in global change and biogeochemistry research. Philosophical Transactions of the Royal Society. Series B. Biological Sciences.. 367:311-321.
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2012.
Synthesis of nanoparticles using plants. Nanoindustry. 7:16-22.
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2012.
Straw amendment to paddy soil stimulates denitrification but biochar amendment promotes anaerobic ammonia oxidation. Journal of Soils and Sediments..
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2017.
Straw amendment to paddy soil stimulates denitrification but biochar amendment promotes anaerobic ammonia oxidation. Journal of Soils and Sediments. 17:2428-2437.
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2017.
Stomatal vs. genome size in angiosperms: The somatic tail wagging the genomic dog? Annals of Botany. 105:573-584.
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2010.
Status of feral oilseed rape in Europe: its minor role as a GM impurity and its potential as a reservoir of transgene persistence. Environmental Science and Pollution Research. 18:111-115.
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2011.
Stage-specific gene expression in Teladorsagia circumcincta (Nematoda: Strongylida) infective larvae and early parasitic stages. International Journal for Parasitology. 38:829-838. Abstract
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2008.
The spliceosome assembly factor GEMIN2 attenuates the effects of temperature on alternative splicing and circadian rhythms. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 112:9382-9387.
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2015.
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2015.
Spatial assessment of land degradation through key ecosystem services: the role of globally available data. Science of the Total Environment. 628-629:539-555.
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2018.
Soil strength and macropore volume limit root elongation rates in many UK agricultural soils. Annals of Botany. 110:259-270.
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2012.
Soil pH controls nitrification and carbon substrate utilization more than urea or charcoal in some highly acidic soils. Biology and Fertility of Soils. 47:515-522.
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2011.
Soil organic carbon sequestration and mitigation potential in a rice cropland in Bangladesh - a modelling approach. Field Crops Research. 226:16-27.
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2018.
Soil nitrogen availability alters rhizodeposition carbon flux into the soil microbial community. Journal of Soils and Sediments. 16:1472-1480.
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2016.
Soil nematode abundance and functional group composition at a global scale. Nature. 572:194-198.
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2019.
Soil microbial activity and community composition as influenced by application of pig biogas slurry in paddy field in southeast China. Paddy and Water Environment. 18:15-25.
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2020.
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2017.
Soil eaten by chacma baboons adsorbs polar plant secondary metabolites representative of those found in their diet. Environmental Geochemistry and Health.
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2018.
Simultaneous reductions in antibiotics and heavy metal pollution during manure composting. Science of the Total Environment. 788:ArticleNo.147830.
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2021.
Simulation of soil organic carbon effects on long-term winter wheat (Triticum aestivum) production under varying fertilizer inputs. Frontiers in Plant Science. 9:ArticleNo.1158.
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2018.
Simulating soil carbon sequestration from long term fertilizer and manure additions under continuous wheat using the DailyDayCent model. Nutrient Cycling in Agroecosystems. 109:291-302.
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2017.
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2020.
Shiga toxin sub-type 2a increases the efficiency of Escherichia coli O157 transmission between animals and restricts epithelial regeneration in bovine enteroids. PLoS Pathogens. 15:ArticleNo.e1008003.
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2019.
Sexual selection for fighting skills as a driver of sexual segregation in polygynous ungulates: an evolutionary model. Animal Behaviour. 80(4):745-755.
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2010.
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2019.
Sequence diversity in the large subunit of RNA polymerase I contributes to Mefenoxam insensitivity in Phytophthora infestans. Molecular Plant Pathology. 15:664-676.
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2014.
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2010.
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2020.
Seasonal change is a major driver of soil resistomes at a watershed scale. Isme Communications. 1:ArticleNo.1.
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2021.
The search for the meaning of life in soil: an opinion. European Journal of Soil Science. 69:31-38.
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2018.
RXLR effector AVR2 up-regulates a brassinosteroid responsive bHLH transcription factor to suppress immunity. Plant Physiology. 174:356-369.
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2017.
Root phenomics of crops - opportunities and challenges. Functional Plant Biology. 36:922-929.
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2009.
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2016.
Root hairs improve root penetration, root-soil contact, and phosphorus acquisition in soils of different strength. Journal of Experimental Botany. 64:3711-3721.
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2013.
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2014.
Root cap influences root colonisation by Pseudomonas fluorescens SBW25 on maize. FEMS Microbiology Ecology. 54:123-130. Abstract
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2005.
The role of trust in the resolution of conservation conflicts. Biological Conservation. 195:196-202.
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2016.
Rising water temperatures alter lipid dynamics and reduce N-3 essential fatty acid concentrations in Scenedesmus obliquus (Chlorophyta). Journal of Phycology. 47:763-774.
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2011.
Rising water temperatures alter lipid dynamics and reduce N-3 essential fatty acid concentrations in Scenedesmus obliquus (chlorophyta). Journal of Phycology. 47:763-764.
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2011.
Rice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate. Nature Communications. 9:ArticleNo.1408.
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2018.
Rice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate. Nature Communications. 9:ArticleNo.1408.
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2018.
Rhizosphere: biophysics, biogeochemistry and ecological relevance. Plant and Soil. 321:117-152.
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2009.
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2012.
Review on ultrasound assisted persulfate degradation of organic contaminants in wastewater: Influences, mechanisms and prospective. Chemical Engineering Journal. 378:ArticleNo.UNSP122146.
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2019.
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2016.
Response of lightning NOx emissions and ozone production to climate change: Insights from the Atmospheric Chemistry and Climate Model Intercomparison Project. Geophysical Research Letters. 43:5492-5500.
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2016.
Relationship between assemblages of mycorrhizal fungi and bacteria on grass roots. Environmental Microbiology. 10:534-541. Abstract
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2008.
Relationship between assemblages of mycorrhizal fungi and bacteria on grass roots. Environmental Microbiology. 10(2):534-541.
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2008.
Relations between the oilseed rape volunteer seedbank, and soil factors, weed functional groups and geographical location in the UK. Ecological Modelling. 212:138-146. Abstract
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2008.
Regression analysis of spatial data. Ecology Letters. 13:246-264.
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2010.
Regression analysis of spatial data. Ecology Letters. 13(2):246-264.
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2010.
Regression analysis of spatial data. Ecology Letters. 13(2):246-264.
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2010.
Regional variation in potential groundwater recharge from spring barley crop fields in the UK under projected climate change. Groundwater for Sustainable Development. 8:332-345.
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2019.
Regeneration of Salix arbuscula and Salix lapponum within a large mammal exclosure: the impacts of microsite and herbivory. Restoration Ecology. 18(Suppl. 1):1-9.
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2010.
Red herrings remain in geographical ecology: a reply to Hawkins et al. (2007). Ecography. 30:845-847.
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2007.
Real-time PCR detection and quantification of vector trichodorid nematodes and Tobacco rattle virus. Molecular and Cellular Probes. 20:203-211. Abstract
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2006.
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2011.
Quantifying turnover in biodiversity of British breeding birds. Journal of Applied Ecology. 53:469-478.
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2015.
Quantifying turnover in biodiversity of British breeding birds. Journal of Applied Ecology. 53:469-478.
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2016.
Quantification of the slug parasitic nematode Phasamarhabditis hermaphrodita from soil samples using real time qPCR. International Journal for Parasitology. 36:1453-1461. Abstract
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2006.
Protected raspberry production alters aphid-plant interactions but not aphid population size. Agricultural and Forest Entomology. 14:217-224.
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2012.
Projections of changes in grassland soil organic carbon under climate change are relatively insensitive to methods of model initialization. European Journal of Soil Science. 64:229-238.
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2013.
Probing free radical processes during storage of extracts from whole roasted coffee beans: impact of O-2 exposure during extraction and storage. Journal of Agricultural and Food Chemistry. 61:3301-3305.
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2013.
Pretreatment is an important method for increasing the conversion efficiency of rice straw by black soldier fly larvae based on the function of gut microorganisms. Science of the Total Environment. 762:ArticleNo.144118.
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2021.
Predicting the effects of body fatness on food intake and performance of sheep. British Journal of Nutrition. 97(6):1206-1215.
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2007.
Potential yield challenges to scale-up of zero budget natural farming. Nature Sustainability. 3:247-252.
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2020.
Potato NPH3/RPT2-like protein StNRL1, targeted by a phytophthora infestans RXLR effector, is a susceptibility factor. Plant Physiology. 171:645-657.
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2016.
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2018.
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2021.
Plant coilin: structural characteristics and RNA-binding properties. PLoS ONE. 8:e53571.
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2013.
Physiological responses of date palm (Phoenix dactylifera) seedlings to seawater and flooding. New Phytologist. 229:3318-3329.
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2021.
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2010.
Phylogenetic diversity of ceftriaxone resistance and the presence of extended-spectrum beta-lactamase genes in the culturable soil resistome. Journal of Global Antimicrobial Resistance.
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2016.
Phylogenetic distribution of genes encoding beta-glucuronidase activity in human colonic bacteria and the impact of diet on faecal glycosidase activities. Environmental Microbiology. 14:1876-1887.
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2012.
Phyllosphere of staple crops under pig manure fertilization, a reservoir of antibiotic resistance genes. Environmental Pollution. 252:227-235.
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2019.
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2014.
Phenological changes of the most commonly-sampled ground beetle (Coleoptera: Carabidae) species in the UK Environmental Change Network. International Journal of Biometeorology. Published online..
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2018.
Phenological changes of the most commonly-sampled ground beetle (Coleoptera: Carabidae) species in the UK environmental change network. International Journal of Biometeorology. 62:1063-1074.
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2018.
Patterns of genetic and eco-geographical diversity in Spanish barleys. Theoretical and Applied Genetics. 116:271-282. Abstract
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2008.
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2012.
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2006.
p15 encoded by Garlic virus X is a pathogenicity factor and RNA silencing suppressor. Journal of General Virology. 99:1515-1521.
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2018.
Osmotic responses of different strains of Steinernema carpocapsae. Nematology. 13:845-851.
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2011.
Optimization of spectral pre-processing for estimating soil conditions on small farms. Soil Use and Management.
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2021.
Oomycetes seek help from the plant: Phytophthora infestans effectors target host susceptibility factors. Molecular Plant. 9:636-638.
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2016.
A novel, efficient and sustainable magnetic sludge biochar modified by graphene oxide for environmental concentration imidacloprid removal. Journal of Hazardous Materials. 407:ArticleNo.124777.
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2021.
A novel Phytophthora infestans haustorium-specific membrane protein is requred for infection of potato. Cellular Microbiology. 10:2271-2284. Abstract
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2008.
Nodulation of Sesbania species by Rhizobium (Agrobacterium) strain IRBG74 and other Rhizobia. Environmental Microbiology. 11:2510-2525.
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2009.
Nodulation of Sesbania species by Rhizobium (Agrobacterium) strain IRBG74 and other rhizobia. Environmental Microbiology. 11(10):2510-2525.
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2009.
Nodulation and nitrogen fixation by Mimosa spp. in the Cerrado and Caatinga biomes of Brazil. New Phytologist. 186:934-946.
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2010.
Nodulation and nitrogen fixation by mimosa spp. In the Cerrado and Caatinga biomes of Brazil. New Phytologist. 186(4):934-946.
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2010.
Nitrification and nitrifiers in acidic soils. Soil Biology and Biochemistry. 116:290-301.
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2018.
Newly identified RNAs of raspberry leaf blotch virus encoding a related group of proteins. Journal of General Virology. 96:3432-3439.
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2015.
Myocardial and systemic inflammation in acute stress-induced (Takotsubo) cardiomyopathy. Circulation. 129:1581-1592.
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2019.
Municipal wastewater as a microbial surveillance platform for enteric diseases: a case study for salmonella and salmonellosis. Environmental Science and Technology. 52:4869-4877.
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2018.
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2017.
Multi-factorial drivers of ammonia oxidizer communities: evidence from a national soil survey. Environmental Microbiology. 15:2545-2556.
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2013.
Morphological responses of wheat (Triticum aestivum L.) roots to phosphorus supply in two contrasting soils. Journal of Agricultural Science. 154:98-108.
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2016.
Modelling the movement and survival of the root-feeding clover weevil, Sitona lepidus, in the root-zone of white clover. Ecological Modelling. 190:133-146. Abstract
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2006.
Modelling soil organic carbon storage with RothC in irrigated Vertisols under cotton cropping systems in the sub-tropics. Soil and Tillage Research. 143:38-49.
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2014.
Modelling nitrous oxide emissions from mown-grass and grain-cropping systems: Testing and sensitivity analysis of DailyDayCent using high frequency measurements. Science of the Total Environment. 572:955-977.
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2016.
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2019.
Modeling soil processes: Review, key challenges, and new perspectives. Vadose Zone Journal. 15
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2016.
Mineral and organic fertilization alters the microbiome of a soil nematode Dorylaimus stagnalis and its resistome. Science of the Total Environment. 680:70-78.
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2019.
Microsite affects willow sapling recovery from bank vole (Myodes glareolus) herbivory, but does not affect grazing risk. Annals of Botany. 112:731-739.
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2013.
Microbial utilization of rice straw and its derived biochar in a paddy soil. Science of the Total Environment.
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2016.
Microbial mechanisms of the contrast residue decomposition and priming effect in soils with different organic and chemical fertilization histories. Soil Biology and Biochemistry. 135:213-221.
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2019.
Microbial indicators of heavy metal contamination in urban and rural soils. Chemosphere. 63(11):1942-1952.
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2006.
Microbial flow within an air-phyllosphere-soil continuum. Frontiers in Microbiology. qq:ArticleNo.615481.
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2021.
A methyl transferase links the circadian clock to the regulation of alternative splicing. Nature. 468:112-116.
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2010.
A mass balance based numerical method for the fractional advection-dispersion equation: Theory and application. Water Resources Research. 41:-W07029. Abstract
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2005.
Mandipropamid targets the cellulose synthase-like PiCesA3 to inhibit cell wall biosynthesis in the oomycete plant pathogen, Phytophthora infestans. Molecular Plant Pathology. 11:227-243.
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2010.
Managing science-policy interfaces for impact: interactions within the environmental governance meshwork. Environmental Science and Policy. 113:21-30.
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2020.
Management and spatial resolution effects on yield and water balance at regional scale in crop models. Agricultural and Forest Meteorology. 275:184-195.
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2019.
LYS12 LysM receptor decelerates Phytophthora palmivora disease progression in Lotus japonicus. Plant Journal. 93:297-310.
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2018.
Looking beyond superficial knowledge gaps: Understanding public representations of biological diversity. International Journal Biodiversity Science Management. 4(2):65-80.
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2008.
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2020.
Long-term effect of re-vegetation on the microbial community of a severely eroded soil in sub-tropical China. Plant and Soil. 328:447-458.
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2010.
Long-term changes in ground beetle (Coleoptera: Carabidae) assemblages in Scotland. Ecological Entomology. 41:157-167.
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2016.
Links between ammonia oxidizer community structure, abundance and nitrification potential in acidic soils. Applied and Environmental Microbiology. 77:4618-4625.
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2011.
Limited effect of planting transgenic rice on the soil microbiome studied by continuous (CO2)-C-13 labeling combined with high-throughput sequencing. Applied Microbiology and Biotechnology. 103:4217-4227.
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2019.
Light-sheet tomography for in situ imaging of Arabidopsis Thaliana roots. Optics Express. 21:16239-16247.
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2013.
Levels of endocrine disrupting compounds in South China Sea. Marine Pollution Bulletin. 85:628-633.
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2014.
The length of micro-sprinkling hoses delivering supplemental irrigation affects photosynthesis and dry matter production of winter wheat. Field Crops Research. 168:65-74.
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2014.
Legume-nodulating betaproteobacteria: diversity, host range, and future prospects. Molecular Plant-Microbe Interactions. 24:1276-1288.
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2011.
Large-scale gene discovery in the oomycete Phytophthora infestans reveals likely components of phytopathogenicity shared with true fungi. Molecular Plant-Microbe Interactions. 18:229-243. Abstract
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2005.
A large and deep root system underlies high nitrogen-use efficiency in maize production. PLoS ONE. 10:e0126293.
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2015.
Kaleidoscoping landscapes, shifting perspectives. Professional Geographer. 58(4):436-447.
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2006.
Irreproducibility in searches of scientific literature: A comparative analysis. Nature Methods. 11:14658-14668.
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2021.
Involvement of the chloroplast gene ferredoxin 1 in multiple responses of Nicotiana benthamiana to Potato virus X infection. Journal of Experimental Botany. 71:2142-2156.
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2020.
Involvement of the chloroplast gene ferredoxin 1 in multiple responses of N. benthamiana to Potato virus X infection. Journal of Experimental Botany. Published online..
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2020.
Investigating riparian margins for vegetation patterns and plant-environment relationships in northeast Scotland. Journal of Environmental Quality. 41:364-372.
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2012.
Investigating microbial micro-habitat structure using x-ray computed tomography. Geoderma. 133:398-407. Abstract
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2006.
Invertebrate species at risk from ash dieback in the UK. Journal of Insect Conservation. 19:75-85.
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2015.
An invasive Mimosa in India does not adopt the symbionts of its native relatives. Annals of Botany. 112:179-186.
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2013.
The internal domain of hordeivirus movement protein TGB1 forms in vitro filamentous structures.. Biochemistry (Moscow). 75:752-758.
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2010.
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2019.
Interaction between nanocellulose and tobacco mosaic virus-like particles: an atomic force microscopy study. Cellulose, Published online.
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2020.
The interaction between dam methylation sites and Xha1 restriction digest sites in Escherichia coli O157: H7 EDL933. Journal of Applied Microbiology. 102:820-825. Abstract
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2007.
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2021.
Integrated near infrared and ultraviolet spectroscopy techniques for determination of hydrate inhibitors in the presence of NaCl. Industrial and Engineering Chemistry Research. 57:11728-11737.
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2018.
Infra-red thermography for high throughput field phenotyping in Solanum tuberosum. PLoS ONE. 8:e65816.
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2013.
Influence of prenatal nutrition and obesity on tissue specific fat mass and obesity-associated (FTO) gene expression. Reproduction. 139(1):265-274.
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2010.
The influence of information provision on people's landscape preferences: a case study on understorey vegetation of deer-browsed woodlands. Landscape and Urban Planning. 124:129-139.
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2014.
Incorporation of urea-derived C-13 into microbial communities in four different agriculture soils. Biology and Fertility of Soils. 50:603-612.
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2014.
Incorporation of C-13-labelled rice rhizodeposition into soil microbial communities under different fertilizer applications. Applied Soil Ecology. 101:11-19.
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2016.
Incorporating weather sensitivity in inventory-based estimates of boreal forest productivity: a meta-analysis of process model results. Ecological Modelling. 260:25-35.
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2013.
Incentivising the collaborative management of ecological resources: a case study of wild deer in the UK. Land Use Policy. 36:485-491.
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2014.
Improving the science-policy dialogue to meet the challenges of biodiversity conservation: having a conversation rather than talking at one-another. Biodiversity and Conservation. 23:387-404.
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2014.
The implication of input data aggregation on up-scaling soil organic carbon changes. Environmental Modelling and Software. 96:361-377.
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2017.
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2010.
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2010.
Impact of hydraulic suction history on crack growth mechanics in soil. Water Resources Research. 44:-W00C01. Abstract
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2008.
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2006.
Impact analysis of climate data aggregation at different spatial scales on simulated net primary productivity for croplands. European Journal of Agronomy. 88:41-52.
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2017.
Impact analysis of climate data aggregation at different spatial scales on simulated net primary productivity for croplands. European Journal of Agronomy. 88:41-52.
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2017.
Identifying conflicts and opportunities for collaboration in the management of a wildlife resource: a mixed-methods approach. Wildlife Research. 37(8):647-657.
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2010.
Identification of the domains of Cauliflower mosaic virus protein P6 responsible for the suppression of RNA-silencing and salicylic acid-signaling. Journal of General Virology. 94:2777-2789.
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2013.
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2014.
Identification of a fluorometabolite from Streptomyces sp MA37: (2R3S4S)-5-fluoro-2,3,4-trihydroxypentanoic acid. Chemical Science. 6:1414-1419.
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2015.
Hydrothermal synthesis of magnetic sludge biochar for tetracycline and ciprofloxacin adsorptive removal. Bioresource Technology. 318:ArticleNo.124199.
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2021.
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2020.
Hydrocarbon contamination affects deep-sea benthic oxygen uptake and microbial community composition. Deep Sea Research Part 1 - Oceanographic Research Papers. 100:79-87.
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2015.
How to manage the impact of gene flow on oilseed rape grain quality? Simulation case studies of three contrasted landscapes European Journal of Agronomy. 38:32-42.
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2012.
How does pattern of feeding and rate of nutrient delivery influence conditioned food preferences? Oecologia. 153(3):617-624.
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2007.
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2018.
A homolog of Blade-On-Petiole 1 and 2 (BOP1/2) controls internode length and homeotic changes of the barley inflorescence. Plant Physiology. 171:1113-1127.
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2016.
Highly efficient removal of imidacloprid using potassium hydroxide activated magnetic microporous loofah sponge biochar. Science of the Total Environment. 765:ArticleNo.144253.
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2021.
Highly efficient nickel (II) removal by sewage sludge biochar supported a-Fe2O3 and a-FeOOH: Sorption characteristics and mechanisms. PLoS ONE. 14:ArticleNo.e0218114..
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2019.