Publications list

Found 176 results

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2010

Sprent JI, Odee DW, Dakora FD. 2010. African legumes: A vital but under-utilised resource. Journal of Experimental Botany. 61:1257-1265.

Mauro-Herrera M, Meerow AW, Perera L, Russell JR, Schnell RJ. 2010. Ambiguous genetic relationships among coconut (Cocos nucifera L.) cultivars: the effects of outcrossing, sample source and size, and method of analysis. Genetic Resources and Crop Evolution. 57:203-217.

Srinivasan DG, Fenton B, Jaubert-Possamai S, Jaouannet M. 2010. Analysis of meiosis and cell cycle genes of the facultatively asexual pea aphid, Acyrthosiphon pisum (Hemiptera: Aphididae). Insect Molecular Biology. 19 Supplement s2:229-239.

Tavares LR, Fortalezas S, Carrilho C, McDougall GJ, Stewart D, Ferreira RB, Santos CN. 2010. Antioxidant and antiproliferative properties of strawberry tree tissues. Journal of Berry Research. 1:3-12.

Fortalezas S, Tavares LR, Pimpao RC, Tyagi A, Pontes V, Alves PM, McDougall GJ, Stewart D, Ferreira RB, Santos CN. 2010. Antioxidant properties and neuroprotective capacity of strawberry tree fruit (Arbutus unedo). Nutrients. 2:214-229.

Hawes C, Squire GR, Hallett PD, Watson CA, Young MW. 2010. Arable plant communities as indicators of farming practice. Agriculture, Ecosystems and Environment. 138:17-26.

Navajas EA, Glasbey CA, Fisher AV, Ross DW, Hyslop JJ, Richardson RI, Simm G, Roehe R. 2010. Assessing beef carcass tissue weights using computed tomography spirals of primal cuts. Meat Science. 84:30-38.

Spezia L. 2010. Bayesian analysis of multivariate Gaussian hidden Markov models with an unknown number of regimes. Journal of Time Series Analysis. 31:1-11.

Duthie SJ, Horgan GW, de Roos B, Rucklidge GJ, Reid M, Duncan G, Pirie L, Basten GP, Powers HJ. 2010. Blood folate status and expression of proteins involved in immune function, inflammation and coagulation: Biochemical and proteomic changes in the plasma of humans in response to long-term synthetic folic acid supplementation. Journal of Proteome Research. 9:1941-1950.

Pacak A, Strozycki PM, Barciszewska-Pacak M, Alejska M, Lacomme C, Jarmolowski A, Szweykowska-Kulinska Z, Figlerowicz M. 2010. The brome mosaic virus-based recombination vector triggers a limited gene silencing response depending on the orientation of the inserted sequence. Archives of Virology. 155:169-179.

Bontemps C, Elliott GN, Simon MF, Dos Reis J FB, Gross E, Lawton RC, Neto NE, Loureiro MdeF, de Faria SM, Sprent JI et al.. 2010. Burkholderia species are ancient symbionts of legumes. Molecular Ecology. 19:44-52.

Jones HG. 2010. Can water droplets on leaves cause leaft scorch? New Phytologist. 185:865-867.

Sonnenberg R, Bransby MF, Hallett PD, Bengough AG, Mickovski SB, Davies MCR. 2010. Centrifuge modelling of soil slopes reinforced with vegetation. Canadian Geotechnical Journal. 47:1415-1430.

Newton AC, Akar T, Baresel JP, Bebeli PJ, Bettencourt E, Bladenopoulos KV, Czembor JH, Fasoula DA, Katsiotis A, Koutis K et al.. 2010. Cereal landraces for sustainable agriculture. A review (Review). Agronomy for Sustainable Development. 30:237-269.

Chen XY, Daniell TJ, Neilson R, O'Flaherty V, Griffiths BS. 2010. A comparison of molecular methods for monitoring soil nematodes and their use as biological indicators. European Journal of Soil Science. 46:319-324.

Denwood MJ, Reid SWJ, Love S, Nielsen MK, Matthews L, McKendrick IJ, Innocent GT. 2010. Comparison of three alternative methods for analysis of equine faecal egg count reduction test data.. Preventive Veterinary Medicine. 93:316-323.

Dupuy L, MacKenzie J, Haseloff J. 2010. Coordination of plant cell division and expansion in a simple morphogenetic system. Proceedings of the National Academy of Sciences, USA. 107:2711-2716.

Bartlett MD, Briones MJI, Neilson R, Schmidt O, Spurgeon D, Creamer RE. 2010. A critical review of current methods in earthworm ecology: From individuals to populations (Review). European Journal of Soil Biology. 46:67-73.

Gonz I, Mart I, Rakitina DV, Lewsey MG, Atencio FA, Llave C, Kalinina NO, Carr JP, Palukaitis P, Canto T. 2010. Cucumber mosaic virus 2b protein subcellular targets and interactions: Their significance to RNA silencing suppressor activity. Molecular Plant-Microbe Interactions. 23:294-303.

Bagavathiannan MV, Gulden RH, Begg GS, Van Acker RC. 2010. The demography of feral alfalfa (Medicago sativa L.) populations occurring in road side habitats in southern Manitoba Canada: Implications for novel trait confinement. Environmental Science and Pollution Research. 17:1448-1459.

Zhang K, Burns IG, Greenwood DJ, Hammond JP, White PJ. 2010. Developing a reliable strategy to infer the effective soil hydraulic properties from field evaporation experiments for agro-hydrological models. Agricultural Water Management. 97:399-409.

Martinussen I, Uleberg E, McDougall GJ, Stewart D, Juntilla O. 2010. Development and quality of cloudberry (Rubus chamaemorus L) as affected by female parent, male parent and temperature. Journal of Berry Research. 1:91-101.

Moloney C, Griffin D, Jones PW, Bryan GJ, McLean K, Bradshaw JE, Milbourne D. 2010. Development of diagnostic markers for use in breeding potatoes resistance to Globodera pallida pathotype Pa2/3 using germplasm derived from Solanum tuberosum ssp. andigena CPC 2802. Theoretical and Applied Genetics. 120:679-689.

Ross HA, McDougall GJ, Vincent JFV, Stewart D, Verrall SR, Taylor MA. 2010. Discerning intra-tuber differences in textural properties in cooked Solanum tuberosum group Tuberosum and group Phureja tubers. Journal of the Science of Food and Agriculture. 90:1527-1532.

Louis P, Young P, Holtrop G, Flint HJ. 2010. Diversity of human colonic butyrate-producing bacteria revealed by analysis of the butyryl-CoA:acetate CoA-transferase gene. Environmental Microbiology. 12:304-314.

Zhang B, Deng H, Wang HL, Yin R, Hallett PD, Griffiths BS, Daniell TJ. 2010. Does microbial habitat or community structure drive the functional stability of microbes to stresses following re-vegetation of a severely degraded soil? Soil Biology and Biochemistry. 42:850-859.

Broadley MR, White PJ. 2010. Eats roots and leaves. Can edible horticultural crops address dietary calcium, magnesium and potassium deficiencies? Proceedings of the Nutrition Society. 69:601-612.

Moragues M, Comadran J, Waugh R, Milne I, Flavell AJ, Russell JR. 2010. Effects of ascertainment bias and marker number on estimations of barley diversity from high-throughput SNP genotype data. Theoretical and Applied Genetics. 120:1525-1534.

Johnson SN, Gregory PJ, McNicol JW, Oodally Y, Zhang XX, Murray PJ. 2010. Effects of soil conditions and drought on egg hatching and larval survival of the clover root weevil (Sitona lepidus). Applied Soil Ecology. 44:75-79.

Broadley MR, Hammond JP, White PJ, Salt DE. 2010. An efficient procedure for normalising ionomics data for Arabidopsis thaliana. New Phytologist. 186:270-274.

Nielson UN, Osler GHR, Campbell CD, Neilson R, Burslem DFRP, van der Wal R. 2010. The enigma of soil animal species diversity revisited: the role of small-scale heterogeneity. PLoS One. 5:-e11567.

Chen XW, Hackett CA, Niks RE, Hedley PE, Booth C, Druka A, Marcel TC, Vels A, Bayer M, Milne I et al.. 2010. An eQTL analysis of partial resistance to Puccinia hordei in barley. PLoS One. 5:-e8598.

Fyfe CL, Stewart J, Murison SD, Jackson DM, Rance K, Speakman JR, Horgan GW, Johnstone AM. 2010. Evaluating energy intake measurement in free-living subjects: when to record and for how long? Public Health Nutrition. 13:172-180.

Cock PJA, Whitworth DE. 2010. Evolution of relative reading frame bias in unidirectional prokaryotic gene overlaps. Molecular Biology and Evolution. 27:753-756.

Tattersall RJ, Prashar A, Singh KD, Tokarczuk PF, Erichsen JT, Hocking PM, Guggenheim JA. 2010. Ex vivo magnetic resonance imaging of crystalline lens dimensions in chicken. Molecular Vision. 16:144-153.

Druka A, Franckowiak JD, Lundqvist U, Bonar N, Alexander J, Guzy-Wrobelska J, Ramsay L, Druka I, Grant I, Macaulay M et al.. 2010. Exploiting induced variation to dissect quantitative traits in barley. Biochemical Society Transactions. 38:683-688.

Druka A, Potokina E, Luo ZW, Jiang N, Chen XW, Kearsey MJ, Waugh R. 2010. Expression quantitative trait loci analysis in plants. Plant Biotechnology Journal. 8:10-27.

Stushnoff C, Ducreux LJM, Hancock RD, Hedley PE, Holm DG, McDougall GJ, McNicol JW, Morris J, Morris WL, Sungurtas J et al.. 2010. Flavonoid profiling and transcriptome analysis reveals new gene-metabolite correlations in tubers of Solanum tuberosum L. Journal of Experimental Botany. 61:1225-1238.

Woodhead M, Weir A, Smith K, McCallum S, MacKenzie K, Graham J. 2010. Functional markers for red raspberry. Journal of the American Society for Horticultural Science. 135:418-427.

Zakri AM, Ziegler A, Torrance L, Fischer R, Commandeur U. 2010. Generation and characterisation of a scFv against recombinant coat protein of the geminivirus Tomato leaf curl New Delhi virus. Archives of Virology. 155:335-342.

White PJ, Hammond JP, King GJ, Bowen HC, Hayden RM, Meacham MC, Spracklen WP, Broadley MR. 2010. Genetic analysis of potassium use efficiency in Brassica oleracea. Annals of Botany. 105:1199-1210.

McCallum S, Woodhead M, Hackett CA, Kassim A, Paterson A, Graham J. 2010. Genetic and environmental effects influencing fruit colour and QTL analysis in raspberry. Theoretical and Applied Genetics. 121:611-627.

Jing RC, Vershinin AV, Grzebyta J, Shaw P, Smykal P, Marshall DF, Ambrose MJ, Ellis THN, Flavell AJ. 2010. The genetic diversity and evolution of field pea (Pisum) studied by high throughput retrotransposon based insertion polymorphism (RBIP) marker analysis. BMC Evolutionary Biology. 10:-44.

Granger SJ, Bol R, Meier-Augenstein W, Leng MJ, Kemp HF, Heaton THE, White SM. 2010. The hydrological response of heavy clay grassland soils to rainfall in south-west England using . Rapid Communications in Mass Spectrometry. 24:475-482.

Stroud JL, Li HF, Lopez-Bellido FJ, Broadley MR, Foot I, Fairweather-Tait SJ, Hart DJ, Hurst R, Knott P, Mowat H et al.. 2010. Impact of sulphur fertilisation on crop response to selenium fertilisation. Plant and Soil. 332:31-40.

Bek AS, Sauer J, Thygesen MB, Duus JO, Petersen BO, Thirup S, James EK, Jensen KJ, Stougaard J, Radutoiu S. 2010. Improved characterisation of nod factors and genetically based variation in LysM receptor domains identify amino acids expendable for nod factor recognition in Lotus spp.. Molecular Plant-Microbe Interactions. 23:58-66.

Griffiths BS, Ball BC, Daniell TJ, Hallett PD, Neilson R, Wheatley RE, Osler G, Bohanec M. 2010. Integrating soil quality changes to arable agricultural systems following organic matter addition, or adoption of a ley-arable rotation. Applied Soil Ecology. 46:43-53.

Almoosawi S, McDougall GJ, Fyfe L, Al-Dujaili EAS. 2010. Investigating the inhibitory activity of green coffee and cacao bean extract on pancreatic lipase. Nutrition Bulletin. 35:207-212.

Raczynska KD, Simpson CG, Ciesiolka A, Szewc L, Lewandowska D, McNicol JW, Szweykowska-Kulinska Z, Brown JWS, Jarmolowski A. 2010. Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana.. Nucleic Acids Research. 38:265-278.

Flynn KJ, Raven JA, Rees TAV, Finkel ZV, Quigg A, Beardall J. 2010. Is the growth rate hypothesis applicable to microalgae? Journal of Phycology. 46:1-12.

Thorsen MK, Woodward S, McKenzie BM. 2010. Kelp (Laminaria digitata) increases germination and affects rooting and plant vigour in crops and native plants from an arable grassland in the Outer Hebrides, Scotland. Journal of Coastal Conservation. 14:239-247.

Blum M, Boehler M, Randall E, Young V, Csukai M, Kraus S, Moulin F, Scalliet G, Avrova AO, Whisson SC et al.. 2010. Mandipropamid targets the cellulose synthase-like PiCesA3 to inhibit cell wall biosynthesis in the oomycete plant pathogen, Phytophthora infestans. Molecular Plant Pathology. 11:227-243.

Dixon ER, Blackwell MSA, Dhanoa MS, Berryman Z, de la Fuente Martinez N, Junquera D, Martinez A, Murray PJ, Kemp HF, Meier-Augenstein W et al.. 2010. Measurement at the field scale of soil . Rapid Communications in Mass Spectrometry. 24:511-518.

Davies HV, Shepherd LVT, Stewart D, Frank T, R R, Engel K-H. 2010. Metabolome variability in crop plant species - when, where, how much and so what? Regulatory Toxicology and Pharmacology. 58:S54-S61.

Shepherd LVT, Alexander CA, Sungurtas J, McNicol JW, Stewart D, Davies HV. 2010. Metabolomic analysis of the potato tuber life cycle. Metabolomics. 6:274-291.

Dobson G, Shepherd T, Verrall SR, Griffiths DW, Ramsay G, McNicol JW, Davies HV, Stewart D. 2010. A metabolomics study of cultivated potato (Solanum tuberosum) groups, Andigena, Phureja, Stenotomum and Tuberosum using gas chromatography-mass spectrometry. Journal of Agricultural and Food Chemistry. 58:1214-1223.

Fenton B, Margaritopoulos JT, Malloch GL, Foster SP. 2010. Micro-evolutionary change in relation to insecticide resistance in the peach-potato aphid, Myzus persicae. Ecological Entomology. 35:131-146.

Preedy K, Schofield PG, Liu S, Matzavinos A, Chaplain MAJ, Hubbard SF. 2010. Modelling contact spread of infection in host-parasitoid systems: Vertical transmission of pathogens can cause chaos. Journal of Theoretical Biology. 262:441-451.

Clayton SJ, Clegg CD, Bristow AW, Gregory PJ, Headon DM, Murray PJ. 2010. Movement of newly assimilated 13C carbon in the grass Lolium perenne and its incorporation into rhizosphere microbial DNA. Rapid Communications in Mass Spectrometry. 24:535-540.

Berry P, Spink J, Foulkes J, White PJ. 2010. The physiological basis of genotypic differences in nitrogen use efficiency in oilseed rape (Brassica napus L.). Field Crops Research. 119:365-373.

Chichkova NV, Shaw J, Galiullina RA, Drury GE, Tuzhikov AI, Kim S-H, Kalkum M, Hong TB, Gorshkova EN, Torrance L et al.. 2010. Phytaspase, a relocalisable cell death promoting plant protease with caspase specificity. EMBO Journal. 29:1149-1161.

Finkel ZV, Beardall J, Flynn KJ, Quigg A, Rees TAV, Raven JA. 2010. Phytoplankton in a changing world: Cell size and elemental stoichiometry. Journal of Plankton Research. 32:119-137.

White PJ, Brown PH. 2010. Plant nutrition for sustainable development and global health. Annals of Botany. 105:1073-1080.

Kim S-H, Spensley M, Choi SK, Calixto CPG, Pendle AF, Koroleva O, Shaw PJ, Brown JWS. 2010. Plant U13 orthologues and orphan snoRNAs identified by RNomics of RNA from Arabidopsis nucleoli. Nucleic Acids Research. 38:3054-3067.

Lankau RA, Wheeler E, Bennett AE, Strauss SY. 2010. Plant-soil feedbacks contribute to an intransitive competitive network that promotes both genetic and species diversity. Journal of Ecology. 99:176-185.

Holden N. 2010. Plants as reservoirs for human enteric pathogens (Review). CAB Reviews: Perspectives in Agriculture, Veterinary Science, Nutrition and Natural Resources. 5, 047:1-11.

Gill CIR, McDougall GJ, Glidewell SM, Stewart D, Shen Q, Tuohy K, Dobbin A, Boyd A, Brown E, Haldar S et al.. 2010. Profiling of phenols in human faecal water after raspberry supplementation. Journal of Agricultural and Food Chemistry. 58:10389-10395.

Johnson SN, Petitjean S, Clark KE, Mitchell C. 2010. Protected raspberry production accelerates onset of oviposition by vine weevils (Otiorhynchus sulcatus). Agricultural and Forest Entomology. 12:277-283.

Beale CM, Lennon JJ, Yearsley JM, Brewer MJ, Elston DA. 2010. Regression analysis of spatial data. Ecology Letters. 13:246-264.

Simpson CG, Manthri S, Raczynska KD, Kalyna M, Lewandowska D, Kusenda B, Maronova M, Szweykowska-Kulinska Z, Jarmolowski A, Barta A et al.. 2010. Regulation of plant gene expression by alternative splicing. Biochemical Society Transactions. 38:667-671.

Lees AK, Brierley JL, Stewart JA, Hilton AJ, Wale SJ, Gladders P, Bradshaw NJ, Peters JC. 2010. Relative importance of seed-tuber and soilborne inoculum in causing black dot disease of potato. Plant Pathology. 59:693-702.

Thorsen MK, Hopkins DW, Woodward S, McKenzie BM. 2010. Resilience of microorganisms and aggregation of a sandy calcareous soil to amendment with organic and synthetic fertilizer. Soil Use and Management. 26:149-157.

Hartley IP, Hopkins DW, Sommerkorn M, Wookey PA. 2010. The response of organic matter mineralisation to nutrient and substrate additions in subarctic soils. Soil Biology & Biochemistry. 42:92-100.

Dupuy L, Gregory PJ, Bengough AG. 2010. Root growth models: Towards a new generation of continuous approaches. Journal of Experimental Botany. 61:2131-2143.

K A, Kuiper HA, Marvin HJP, Boon PE, Busk L, Cnudde FC, Cope S, Davies HV, Dreyer M, Frewer LJ et al.. 2010. The SAFE FOODS framework for improved risk analysis of foods. Food Control. 21:1566-1587.

Cock PJA, Fields CJ, Goto N, Heuer ML, Rice PM. 2010. The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants. Nucleic Acids Research. 38:1767-1771.

Broadley MR, Alcock J, Alford J, Cartwright P, Foot I, Fairweather-Tait SJ, Hart DJ, Hurst R, Knott P, McGrath SP et al.. 2010. Selenium biofortification of high-yielding winter wheat (Triticum aestivum L.) by liquid or granular Se fertilisation. Plant and Soil. 332:5-18.

McGavin WJ, MacFarlane SA. 2010. Sequence similarities between Raspberry leaf mottle virus, Raspberry leaf spot virus and the closterovirus Raspberry mottle virus. Annals of Applied Biology. 156:439-448.

Stroud JL, Broadley MR, Foot I, Fairweather-Tait SJ, Hart DJ, Hurst R, Knott P, Mowat H, Norman K, Scott P et al.. 2010. Soil factors affecting selenium concentration in wheat grain and the fate and speciation of Se fertilisers applied to soil. Plant and Soil. 332:19-30.

Zhang X-S, Chase-Topping ME, McKendrick IJ, Savill NJ, Woolhouse MEJ. 2010. Spread of E. coli O157 infection among Scottish cattle farms: Stochastic models and model selection. Epidemics. 2:11-20.

Newton AC, Duncan JM, Augustin NH, Guy DC, Cooke DEL. 2010. Survival, distribution and genetic variability of inoculum of the strawberry red core pathogen, Phytophthora fragariae var. fragariae, in soil. Plant Pathology. 59:472-479.

Iannetta PPM, Begg GS, Valentine TA, Wishart J. 2010. Sustainable disease control using weeds as indicators: Capsella bursa pastoris and Tobacco Rattle Virus. Weed Research. 50:511-514.

Milne I, Bayer M, Cardle L, Shaw P, Stephen G, Wright F, Marshall DF. 2010. Tablet - next generation sequence assembly visualization. Bioinformatics. 26:401-402.

MacFarlane SA. 2010. Tobraviruses - plant pathogens and tools for biotechnology (Review). Molecular Plant Pathology. 11:577-583.

Zhang K, Greenwood DJ, Spracklen WP, Rahn CR, Hammond JP, White PJ, Burns IG. 2010. A universal agro-hydrological model for water and nitrogen cycles in the soil-crop system SMCR_N: Critical update and further validation. Agricultural Water Management. 97:1411-1422.

Shepherd LVT, Bradshaw JE, Dale MFB, McNicol JW, Pont SDA, Mottram DS, Davies HV. 2010. Variation in acrylamide producing potential in potato: Segregation of the trait in a breeding population. Food Chemistry. 123:568-573.

Mudge SM, Meier-Augenstein W, Eadsforth C, DeLeo P. 2010. What contribution do detergent fatty alcohols make to sewage discharges and the marine environment? Journal of Environmental Monitoring. 12:1846-1856.

Waugh R, Marshall DF, Thomas WTB, Comadran J, Russell JR, Close T, Stein N, Hayes P, Muehlbauer G, Cockram J et al.. 2010. Whole-genome association mapping in elite inbred crop varieties. Genome. 53:967-972.

2009

Kim S-H, Koroleva OA, Lewandowska D, Pendle AF, Clark GP, Simpson CG, Shaw PJ, Brown JWS. 2009. Aberrant mRNA transcripts and the nonsense-mediated decay proteins UPF2 and UPF3 are enriched in the Arabidopsis nucleolus. Plant Cell. 21:2045-2057.

Karim N, Jones JT, Okada H, Kikuchi T. 2009. Analysis of expressed sequence tags and identification of genes encoding cell-wall-degrading enzymes from the fungivorous nematode Aphelenchus avenae. BMC Genomics. 10:-525.

Terzi LC, Simpson GG. 2009. Arabidopsis RNA immunoprecipitation. Plant Journal. 59:163-168.

Antunez-Lamas M, Cabrera E, Lopez-Solanilla E, Solano R, Gonzalez-Melendi P, Chico JM, Toth IK, Birch PRJ, Pritchard L, Liu H et al.. 2009. Bacterial chemoattraction towards jasmonate plays a role in the entry of Dickeya dadantii through wounded tissues. Molecular Microbiology. 74:662-671.

Lewis FI, Gunn GJ, McKendrick IJ, Murray FM. 2009. Bayesian inference for within-herd prevalence of Leptospira interrogans serovar Hardjo using bulk milk antibody testing. Biostatistics. 10:719-728.

Woodward FI, Bardgett RD, Raven JA, Hetherington AM. 2009. Biological approaches to global environmental change: mitigation and remediation. Current Biology. 19:R615-R623.

Subbarao GV, Kishii M, Nakahara K, Ishikawa T, Ban T, Tsujimoto H, George TS, Berry WL, Hash CT, Ito O. 2009. Biological nitrification inhibition (BNI) - Is there potential for genetic interventions in Triticeae? Breeding Science. 59:529-545.

Raven JA, Giordano M. 2009. Biomineralization by photosynthetic organisms: Evidence of coevolution of the organisms and their environment? Geobiology. 7:140-154.

Harrison BD. 2009. A brief outline of the development of plant virology in the 20th century. Journal of Plant Pathology. 91:509-520.

Eaton SL, Anderson MJ, Hamilton S, Gonz L, Sales J, Jeffrey M, Reid HW, Rocchi MA, Chianini F. 2009. CD21 B cell populations are altered following subcutaneous scrapie inoculation in sheep. Veterinary Immunology and Immunopathology. 131:105-109.

Hudacsek P, Bransby MF, Hallett PD, Bengough AG. 2009. Centrifuge modelling of climatic effects on clay embankments. Proceedings of the Institution of Civil Engineers - Engineering Sustainability. 162:91-100.

Canto T, Aranda MA, Fereres A. 2009. Climate change effects on physiology and population processes of hosts and vectors that influence the spread of hemipteran-borne plant viruses. Global Change Biology. 15:1884-1894.

Prashar A, Hocking PM, Erichsen JT, Fan Q, Saw S-M, Guggenheim JA. 2009. Common determinants of body size and eye size in chickens from an advanced intercross line. Experimental Eye Research. 89:42-48.

Ziegler A, Cowan GH, Torrance L. 2009. Comparative sequence analysis and serological and infectivity studies indicate that cocksfoot mild mosaic virus is a member of the genus Panicovirus. Archives of Virology. 154:1545-1549.

Barker H, McGeachy KD, Toplak N, Gruden K, Zel J, Browning I. 2009. Comparison of genome sequence of PVY isolates with biological properties. American Journal of Potato Research. 86:227-238.

Van Toor R, Malloch G, Fenton B. 2009. A concept for management of virus-vectors and insecticide resistance in Myzus persicae on potatoes. Redia. XCII:219-221.

Cockell CS, Kaltenegger L, Raven JA. 2009. Cryptic photosynthesis - extrasolar planetary oxygen without a surface biological signature. Astrobiology. 9:623-636.

Cockell CS, L A, Fridlund M, Herbst TM, Kaltenegger L, Absil O, Beichman C, Benz W, Blanc M, Brack A et al.. 2009. Darwin - a mission to detect and search for life on extrasolar planets. Astrobiology. 9:1-22.

Close TJ, Bhat PR, Lonardi S, Wu Y, Rostoks N, Ramsay L, Druka A, Stein N, Svensson JT, Wanamaker S et al.. 2009. Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics. 10:-582.

Kopecky D, Bartos J, Lukaszewski AJ, Baird JH, Cernoch V, K R, Rognli OA, Blois H, Caig V, Lubberstedt T et al.. 2009. Development and mapping of DArT markers within the Festuca - Lolium complex. BMC Genomics. 10:-473.

Bartley PM, Wright SE, Maley SW, Buxton D, Nath M, Innes EA. 2009. The development of immune responses in Balb/c mice following inoculation with attenuated or virulent Neospora caninum tachyzoites. Parasite Immunology. 31:392-401.

Uibopuu A, Moora M, Saks U, Daniell TJ, Zobel M, Opik M. 2009. Differential effect of arbuscular mycorrhizal fungal communities from ecosystems along management gradient on the growth of forest understorey plant species. Soil Biology & Biochemistry. 41:2141-2146.

Dawson IK, Hedley PE, Guarino L, Jaenicke H. 2009. Does biotechnology have a role in the promotion of underutilised crops? Food Policy. 34:319-328.

Makarov VV, Rybakova EN, Efimov AV, Dobrov EN, Serebryakova MV, Solovyev AG, Yaminsky IV, Taliansky ME, Morozov SV, Kalinina NO. 2009. Domain organization of the N-terminal portion of hordeivirus movement protein TGBp1. Journal of General Virology. 90:3022-3032.

Koroleva OA, Calder G, Pendle AF, Kim S-H, Lewandowska D, Simpson CG, Jones IM, Brown JWS, Shaw PJ. 2009. Dynamic behaviour of Arabidopsis eIF4A-III, putative core protein of exon junction complex: fast relocation to nucleolus and splicing speckles under hypoxia. Plant Cell. 21:1592-1606.

Wypijewski K, Hornyik C, Shaw JA, Stephens J, Goraczniak R, Gunderson SI, Lacomme C. 2009. Ectopic 5' splice sites inhibit gene expression by engaging RNA surveillance and silencing pathways in plants. Plant Physiology. 151:955-965.

Ramirez-Farias C, Slezak K, Fuller Z, Duncan A, Holtrop G, Louis P. 2009. Effect of inulin on the human gut microbiota: stimulation of Bifidobacterium adolescentis and Faecalibacterium prausnitzii. British Journal of Nutrition. 101:541-550.

Wemelsfelder F, Nevison IM, Lawrence AB. 2009. The effect of perceived environmental background on qualitative assessments of pig behaviour. Animal Behaviour. 78:477-484.

Brown KL, Wathne GJ, Sales J, Bruce ME, Mabbott NA. 2009. The effects of host age on follicular dendritic cell status dramatically impair scrapie agent neuroinvasion in aged mice. Journal of Immunology. 183:5199-5207.

Glasbey CA, Khondoker MR. 2009. Efficiency of functional regression estimators for combining multiple laser scans of cDNA microarrays. Biometrical Journal. 51:45-55.

Waugh R, Jannink JL, Muehlbauer GJ, Ramsay L. 2009. The emergence of whole genome association scans in barley. Current Opinion in Plant Biology. 12:218-222.

Le Gall O, Sanfacon H, Ikegami M, Iwanami T, Jones AT, Karasev A, Lehto K, Wellink J, Wetzel T, Yoshikawa N. 2009. Erratum: Cheravirus and Sadwavirus: two unassigned genera of plant positive-sense single-stranded RNA viruses formerly considered atypical members of the genus Nepovirus (family Comoviridae). Archives of Virology. 154:1019-1019.

Cornulier T, Elston DA, Arcese P, Benton TG, Douglas DJT, Lambin X, Reid J, Robinson RA, Sutherland WJ. 2009. Estimating the annual number of breeding attempts from breeding dates using mixture models. Ecology Letters. 12:1184-1193.

Lokossou AA, Park TH, van Arkel G, Arens M, Ruyter-Spira C, Morales J, Whisson SC, Birch PRJ, Visser RGF, Jacobsen E et al.. 2009. Exploiting knowledge of R/Avr genes to rapidly clone a new LZ-NBS-LRR family of late blight resistance genes from potato linkage group IV. Molecular Plant-Microbe Interactions. 22:630-641.

Low JC, Chambers J, McKelvey WAC, McKendrick IJ, Jeffrey M. 2009. Failure to transmit scrapie infection by transferring preimplantation embryos from naturally infected donor sheep. Theriogenology. 72:809-816.

Cole C, Sobala A, Lu C, Thatcher SR, Bowman A, Brown JWS, Green PJ, Barton GJ, Hutvagner G. 2009. Filtering of deep sequencing data reveals the existence of abundant Dicer-dependent small RNAs derived from tRNAs. RNA. 15:2147-2160.

Osterrieder A, Carvalho CM, Latijnhouwers M, Johansen JN, Stubbs C, Botchway S, Hawes CL. 2009. Fluorescence lifetime imaging of interactions between Golgi tethering factors and small GTPases in plants. Traffic. 10:1034-1046.

Raven JA. 2009. Functional evolution of photochemical energy transformations in oxygen-producing organisms. Functional Plant Biology. 36:505-515.

McLellan H, Gilroy EM, Yun BW, Birch PRJ, Loake GJ. 2009. Functional redundancy in the Arabidopsis Cathepsin B gene family contributes to basal defence, the hypersensitive response and senescence. New Phytologist. 183:408-418.

Bradshaw JE. 2009. A genetic perspective on yield plateau in potato (Review). Potato Journal (Indian). 36:79-94.

Haas BJ, Kamoun S, Zody MC, Jiang RHY, Handsaker RE, Cano LM, Grabherr M, Kodira CD, Raffaele S, Torto-Alalibo T et al.. 2009. Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature. 461:393-398.

Bierman S, Glasbey CA. 2009. A graphical method for dating chicks using bivariate body measurements. Journal of Agricultural, Biological and Environmental Statistics. 14:443-451.

Dimier C, Brunet C, Geider RD, Raven JA. 2009. Growth and photoregulation dynamics of the picoeukaryote Pelagomonas calceolata in fluctuating light. Limnology and Oceanography. 54:823-836.

Raven JA. 2009. Horsetails get the wind up. New Phytologist. 184:6-9.

Caron-Lormier G, Bohan DA, Hawes C, Raybould A, Haughton AJ, Humphry RW. 2009. How might we model an ecosystem? Ecological Modelling. 220:1935-1949.

Kemp HF, Meier-Augenstein W. 2009. Human provenancing of mutilated murder victims through stable isotope profiles (Review). Minerva Medicolegale. 129:219-231.

Madsen CT, Stephens J, Hornyik C, Shaw J, Collinge DB, Lacomme C, Albrechtsen M. 2009. Identification and characterization of barley RNA-directed RNA polymerases. Biochimica et Biophysica Acta. 1789:375-385.

Basnayake S, Maclean DJ, Whisson SC, Drenth A. 2009. Identification and occurrence of the LTR-Copia-like retrotransposon, PSCR and other Copia-like elements in the genome of Phytophthora sojae. Current Genetics. 55:521-536.

Brennan RM, Graham J. 2009. Improving fruit quality in Rubus and Ribes through breeding (Invited review). Functional Plant Science and Biotechnology. 3 Special Issue 1:22-29.

Rakhshanderhoo F, Takeshita M, Squires J, Palukaitis P. 2009. The influence of RNA-dependent RNA polymerase 1 on Potato virus Y infection and on other antiviral response genes. Molecular Plant-Microbe Interactions. 22:1312-1318.

Maberly SC, Ball LA, Raven JA, S D. 2009. Inorganic carbon acquisition by chrysophytes. Journal of Phycology. 45:1052-1061.

Smith LA, Marion G, Swain DL, White PCL, Hutchings MR. 2009. Inter- and intra-specific exposure to parasites and pathogens via the faecal-oral route: a consequence of behaviour in a patchy environment. Epidemiology and Infection. 137:630-643.

Sprent JI. 2009. An interdisciplinary look at legumes and their bacterial symbionts: some thoughts from Big Sky. New Phytologist. 184:15-17.

Cousens C, Thonur L, Imlach S, Crawford J, Sales J, Griffiths DJ. 2009. Jaagsiekte sheep retrovirus is present at high concentration in lung fluid produced by ovine pulmonary adenocarcinoma-affected sheep and can survive for several weeks at ambient temperatures. Research in Veterinary Science. 87:154-156.

Torres-Ca P, Hinojosa MB, Garcia-Ruiz R, Daniell TJ, Carreira JA. 2009. Linking biogeochemical variability and microbial community structure in forest soils: Abies pinsapo-fir forests as a study case. Ecosistemas. 18:91-102.

Smith LA, Marion G, Swain DL, White PCL, Hutchings MR. 2009. Livestock grazing behavior and inter- versus intraspecific disease risk via the fecal-oral route. Behavioral Ecology. 20:426-432.

Koroleva OA, Brown JWS, Shaw PJ. 2009. Localization of eIF4A-III in the nucleolus and splicing speckles is an indicator of plant stress. Plant Signaling & Behavior. 4:1148-1151.

Baggaley NJ, Langan SJ, Futter MN, Potts JM, Dunn SM. 2009. Long-term trends in hydro-climatology of a major Scottish mountain river. Science of the Total Environment. 407:4633-4641.

Wouters J, Raven JA, Minnhagen S, Janson S. 2009. The luggage hypothesis: Comparisons of two phototrophic hosts with nitrogen-fixing cyanobacteria and implications for analogous life strategies for kleptoplastids/secondary symbiosis in dinoflagellates. Symbiosis. 49:61-70.

Vinten AJA, Potts JM, Avery L, Strachan NJC. 2009. Microbial pollution of water by livestock: approaches to risk assessment and mitigation. Animal. 3:744-752.

Butler A, Doherty RM, Marion G. 2009. Model averaging to combine simulations of future global vegetation carbon stocks. Environmetrics. 20:791-811.

Blower TR, Fineran PC, Johnson MJ, Toth IK, Humphreys DP, Salmond GPC. 2009. Mutagenesis and functional characterisation of the RNA and protein components of the toxIN abortive infection and toxin-antitoxin locus of Erwinia. Journal of Bacteriology. 191:6029-6039.

Moir HJ, Gibbins CN, Buffington JM, Webb JH, Soulsby C, Brewer MJ. 2009. A new method to identify the fluvial regimes used by spawning salmonids. Canadian Journal of Fisheries and Aquatic Sciences. 66:1404-1408.

Cummings SP, Gyaneshwar P, Vinuesa P, Farruggia FT, Andrews M, Humphry D, Elliott GN, Nelson A, Orr C, Pettitt D et al.. 2009. Nodulation of Sesbania species by Rhizobium (Agrobacterium) strain IRBG74 and other Rhizobia. Environmental Microbiology. 11:2510-2525.

Raven JA, Beardall J, Flynn KJ, Maberly SC. 2009. Phagotrophy in the origins of photosynthesis in eukaryotes and as a complementary mode of nutrition in phototrophs: relation to Darwin's insectivorous plants. Journal of Experimental Botany. 60:3975-3987.

Agu RC, Swanston JS, Walker JW, Pearson SY, Bringhurst TA, Brosnan JM, Jack FR. 2009. Predicting alcohol yield from UK soft winter wheat for grain distilling: combined influence of hardness and nitrogen measurements. Journal of the Institute of Brewing. 115:183-190.

Granum E, Roberts K, Raven JA, Leegood RC. 2009. Primary carbon and nitrogen metabolic gene expression in the diatom Thalassiosira pseudonana (Bacillariophyceae): Diel periodicity and effects of inorganic carbon and nitrogen. Journal of Phycology. 45:1083-1092.

Hein I, Birch PRJ, Danan S, Lefebvre V, Odeny DA, Gebhardt C, Trognitz F, Bryan GJ. 2009. Progress in mapping and cloning qualitative and quantitative resistance against Phytophthora infestans in potato and its wild relatives. Potato Research. 52:215-227.

Salse J, Abrouk M, Bolot S, Guilhot N, Courcelle E, Faraut T, Waugh R, Close TJ, Messing J, Feuillet C. 2009. Reconstruction of monocotyledonous proto-chromosomes reveals faster evolution in plants than in animals. Proceedings of the National Academy of Sciences, USA. 106:14908-14913.

Spezia L. 2009. Reversible jump and the label switching problem in hidden Markov models. Journal of Statistical Planning and Inference. 139:2305-2315.

Lawson DJ, Jensen HJ. 2009. The role of weak selection and high mutation rates in nearly neutral evolution. Journal of Theoretical Biology. 257:696-703.

Gregory PJ, Bengough AG, Grinev DV, Schmidt S, Thomas WTB, Wojciechowski T, Young IM. 2009. Root phenomics of crops - opportunities and challenges. Functional Plant Biology. 36:922-929.

Andrews M, Maule HG, Hodge S, Cherrill A, Raven JA. 2009. Seed dormancy, nitrogen nutrition and shade acclimation of Impatiens glandulifera: implications for its successful invasion of a deciduous woodland. Plant Ecology and Diversity. 2:145-153.

Lehrach WP, Husmeier D. 2009. Segmenting bacterial and viral DNA sequence alignments with a trans-dimensional phylogenetic factorial hidden Markov model. Journal of the Royal Statistical Society Series C - Applied Statistics. 58:307-327.

Visser RGF, Bachem CWB, de Boer JM, Bryan GJ, Chakrabati SK, Feingold S, Gromadka R, van Ham RCHJ, Huang SW, Jacobs JME et al.. 2009. Sequencing the potato genome: Outline and first results to come from the elucidation of the sequence of the world's most important food crop. American Journal of Potato Research. 86:417-429.

Polechov J, Barton N, Marion G. 2009. Species' range: adaptation in space and time. American Naturalist. 174:E186-E204.

Ki LP, Felber F, Flavell AJ, Guadagnuolo R, Guiatti D, Hauser TP, Olivieri AM, Scotti I, Syed NH, Vischi M et al.. 2009. Spontaneous gene flow and population structure in wild and cultivated chicory, Cichorium intybus L.. Genetic Resources and Crop Evolution. 56:405-419.

Mess A, Squire GR, Perry JN, Angevin F, Gomez M, Townend P, Sausse C, Breckling B, Langrell S, Dzeroski S et al.. 2009. Sustainable introduction of GM crops into European agriculture: a summary report of the FP6 SIGMEA research project. Ol. 16:37-51.

Pearce MC, Chase-Topping ME, McKendrick IJ, Mellor DJ, Locking ME, Allison L, Ternent HE, Matthews L, Knight HI, Smith AW et al.. 2009. Temporal and spatial patterns of bovine Escherichia coli O157 prevalence and comparison of temporal changes in the patterns of phage types associated with bovine shedding and human E. coli O157 cases in Scotland between 1998-2000 and 2002-2004. BMC Microbiology. 9:-276.

Wright HW, Bartley K, Nisbet AJ, McDevitt RM, Sparks NHC, Brocklehurst S, Huntley JF. 2009. The testing of antibodies raised against poultry red mite antigens in an in vitro feeding assay; preliminary screen for vaccine candidates. Experimental and Applied Acarology. 48:81-91.

Hurd CL, Hepburn CD, Currie KI, Raven JA, Hunter KA. 2009. Testing the effects of ocean acidification on algal metabolism: considerations for experimental designs. Journal of Phycology. 45:1236-1251.

Jones HG, Serraj R, Loveys BR, Xiong LH, Wheaton A, Price AH. 2009. Thermal infrared imaging of crop canopies for the remote diagnosis and quantification of plant responses to water stress in the field.. Functional Plant Biology. 36:978-989.

Goodall N, Kisiswa L, Prashar A, Faulkner S, Tokarczuk P, Singh K, Erichsen JT, Guggenheim J, Halfter W, Wride MA. 2009. Three-dimensional modelling of chick embryo eye development and growth using high resolution magnetic resonance imaging. Experimental Eye Research. 89:511-521.

Birch PRJ, Armstrong MR, Bos J, Boevink P, Gilroy EM, Taylor RM, Wawra S, Pritchard L, Conti L, Ewan R et al.. 2009. Towards understanding the virulence functions of RXLR effectors of the oomycete plant pathogen Phytophthora infestans (Review). Journal of Experimental Botany. 60:1133-1140.

Potokina E, Druka A, Kearsey MJ. 2009. Transcript profiling and expression level mapping. Methods in Molecular Biology. 513:81-92.

Crosley LK, Duthie SJ, Polley AC, Bouwman FG, Heim C, Mulholland F, Horgan GW, Johnson IT, Mariman EC, Elliott RM et al.. 2009. Variation in protein levels obtained from human blood cells and biofluids for platelet, peripheral blood mononuclear cell, plasma, urine and saliva proteomics. Genes and Nutrition. 4:95-102.

Hein I, Gilroy EM, Armstrong MR, Birch PRJ. 2009. The zig-zag-zig in oomycete-plant interactions. Molecular Plant Pathology. 10:547-562.

2007

Feuillet C, Langridge P, Waugh R. 2007. Meeting Report: The Aaronsohn-ITMI International Conference. Israel Journal of Plant Sciences. 55:315-319.