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Titlyanov EA, Kiyashko SI, Titlyanova TV, Kalita TL, Raven JA.  2008.  δ13C and δ15N values in reef corals Porites lutea and P. cylindrica and in their epilithic and endolithic algae. Marine Biology. 155:353-361. Abstract
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Chen W-M, James EK, Chou J-H, Sheu S-Y, Yang S-Z, Sprent JI.  2005.  β-Rhizobia from Mimosa pigra, a newly discovered invasive plant in Taiwan. New Phytologist. 168:661-675. Abstract
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Hein I, Gilroy EM, Armstrong MR, Birch PRJ.  2009.  The zig-zag-zig in oomycete-plant interactions. Molecular Plant Pathology. 10:547-562.
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Holeva RC, MacFarlane SA.  2006.  Yeast two-hybrid study of tobacco rattle virus coat protein and 2b protein interactions. Archives of Virology. 151:2123-2132. Abstract
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Oliveira CMG, Ferraz LCCB, Neilson R.  2006.  Xiphinema krugi, species complex or complex of cryptic species? Journal of Nematology. 38:418-428. Abstract
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Cacciola SO, Spica D, Cooke DEL, Raudino F, San Lio GMD.  2006.  Wilt and collapse of Cuphea ignea caused by Phytophthora tropicalis in Italy. Plant Disease. 90:680-680. Abstract
Waugh R, Marshall DF, Thomas WTB, Comadran J, Russell JR, Close T, Stein N, Hayes P, Muehlbauer G, Cockram J et al..  2010.  Whole-genome association mapping in elite inbred crop varieties. Genome. 53:967-972.
Gondoin A, Grussu D, Stewart D, McDougall GJ.  2010.  White and green tea polyphenols inhibit pancreatic lipase in vitro. Food Research International. 43:1537-1544.
Mudge SM, Meier-Augenstein W, Eadsforth C, DeLeo P.  2010.  What contribution do detergent fatty alcohols make to sewage discharges and the marine environment? Journal of Environmental Monitoring. 12:1846-1856.
Sprent JI.  2005.  West African legumes: the role of nodulation and nitrogen fixation. New Phytologist. 167:326-330. Abstract
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Swanson MM, Fraser G, Daniell TJ, Torrance L, Gregory PJ, Taliansky ME.  2009.  Viruses in soils: morphological diversity and abundance in the rhizosphere. Annals of Applied Biology. 155:51-60. Abstract
Hein I, Barciszewska-Pacak M, Hrubikova K, Williamson S, Dinesen M, Soenderby IE, Sundar S, Jarmolowski A, Shirasu K, Lacomme C.  2005.  Virus-induced gene silencing-based functional characterization of genes associated with powdery mildew resistance in barley. Plant Physiology. 138:2155-2164. Abstract
Boevink P, Oparka K.  2005.  Virus-host interactions during movement processes. Plant Physiology. 138:1815-1821. Abstract
Lichner L, Hallett PD, Orfanus T, Czachor H, Rajkai K, Sir M, Tesai M.  2010.  Vegetation impact on the hydrology of an aeolian sandy soil in a continental climate. Ecohydrology. 3:413-420.
Johnson SN, Anderson EA, Dawson G, Griffiths DW.  2008.  Varietal susceptibility of potatoes to wireworm herbivory. Agricultural and Forest Entomology. 10:167-174. Abstract
Griffiths BS, Heckmann LH, Caul S, Thompson J, Scrimgeour CM, Krogh PH.  2007.  Varietal effects of eight paired lines of transgenic Bt maize and near-isogenic non-Bt maize on soil microbial and nematode community structure. Plant Biotechnology Journal. 5:60-68. Abstract
Verchot-Lubicz J, Torrance L, Solovyev AG, Morozov SY, Jackson AO, Gilmer D.  2010.  Varied movement strategies employed by triple gene block encoding viruses (Review). Molecular Plant-Microbe Interactions. 23:1231-1247.
Crosley LK, Duthie SJ, Polley AC, Bouwman FG, Heim C, Mulholland F, Horgan GW, Johnson IT, Mariman EC, Elliott RM et al..  2009.  Variation in protein levels obtained from human blood cells and biofluids for platelet, peripheral blood mononuclear cell, plasma, urine and saliva proteomics. Genes and Nutrition. 4:95-102.
Iannetta PPM, Begg GS, Hawes C, Young MW, Russell JR, Squire GR.  2007.  Variation in Capsella (shepherd's purse): an example of intraspecific functional diversity. Physiologia Plantarum. 129:542-554. Abstract
Shepherd LVT, Bradshaw JE, Dale MFB, McNicol JW, Pont SDA, Mottram DS, Davies HV.  2010.  Variation in acrylamide producing potential in potato: Segregation of the trait in a breeding population. Food Chemistry. 123:568-573.
Zhan J, Linde CC, J T, Merz U, Steinebrunner F, McDonald BA.  2005.  Variation for neutral markers is correlated with variation for quantitative traits in the plant pathogenic fungus Mycosphaerella graminicola. Molecular Ecology. 14:2683-2693. Abstract
Swanston JS, Newton AC, Hoad SP, Spoor W.  2006.  Variation across environments in patterns of water uptake and endosperm modification in barley varieties and variety mixtures. Journal of the Science of Food and Agriculture. 86:826-833. Abstract
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Bradshaw JE, Ramsay G.  2005.  Utilisation of the Commonwealth Potato Collection in potato breeding. Euphytica. 146:9-19. Abstract
Augustin NH, McNicol JW, Marriott CA.  2006.  Using the truncated auto-Poisson model for spatially correlated counts of vegetation. Journal of Agricultural Biological and Environmental Statistics. 11:1-23. Abstract
Harrison SM, Zazzo A, Bahar B, Monahan FJ, Moloney AP, Scrimgeour CM, Schmidt O.  2007.  Using hooves for high-resolution isotopic reconstruction of bovine dietary history. Rapid Communications in Mass Spectrometry. 21:479-486. Abstract
Cullen DW, Toth IK, Pitkin Y, Booham K, Walsh I, Barker I, Lees AK.  2005.  Use of quantitative molecular diagnostic assays to investigate Fusarium dry rot in potato stocks and soil. Phytopathology. 95:1462-1471. Abstract
Lacomme C, Chapman S.  2008.  Use of potato virus X (PVX)-based vectors for gene expression and virus induced gene silencing (VIGS). Current Protocols in Microbiology. 8:16I.1.1-16I.1.13. Abstract
Lees AK, Wale SJ, van de Graaf P, Brierley JL.  2005.  The use of molecular diagnostics to investigate the epidemiology of potato diseases. Australasian Plant Pathology. 34:449-455. Abstract
Davidson RS, Marion G, White PCL, Hutchings MR.  2009.  Use of host population reduction to control wildlife infection: rabbits and paratuberculosis. Epidemiology and Infection. 137:131-138.
Schena L, Cardle L, Cooke DEL.  2008.  Use of genome sequence data in the design and testing of SSR markers for Phytophthora species. BMC Genomics. 9:620-643. Abstract
Torrance L, Andreev I, Gabrenaite-Verhouskay R, Cowan GH, Makinen K, Taliansky ME.  2006.  An unusual structure at one end of potato potyvirus particles. Journal of Molecular Biology. 357:1-8.
Torrance L, Lukhovitskaya NI, Schepetilnikov MV, Cowan GH, Ziegler A, Savenkov EI.  2009.  Unusual long-distance movement strategies of Potato mop-top virus RNAs in Nicotiana benthamiana. Molecular Plant-Microbe Interactions. 22:381-390.
Zhang K, Greenwood DJ, Spracklen WP, Rahn CR, Hammond JP, White PJ, Burns IG.  2010.  A universal agro-hydrological model for water and nitrogen cycles in the soil-crop system SMCR_N: Critical update and further validation. Agricultural Water Management. 97:1411-1422.
Sabot F, Hua-Van A, Bennetzen JL, Capy P, Chalhoub B, Flavell AJ, Leroy P, Morgante M, Panaud O, Paux E et al..  2007.  A unified classification system for eukaryotic transposable elements. Nature Reviews Genetics. 8:973-982. Abstract
Morris WL, Ross HA, Ducreux LJM, Bradshaw JE, Bryan GJ, Taylor MA.  2007.  Umami compunds are a determinant of the flavor of potato (Solanum tuberosum L.).. Journal of Agricultural and Food Chemistry. 55:9627-9633. Abstract
Simpson CG, Brown JWS.  2008.  U12-dependent intron splicing in plants. Current Topics in Microbiology and Immunology. 326:61-82.
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Syed NH, Sureshsundar S, Wilkinson MJ, Bhau BS, Cavalcanti JJV, Flavell AJ.  2005.  Ty1-copia retrotransposon-based SSAP marker development in cashew (Anacardium occidentale L.). Theoretical and Applied Genetics. 110:1195-1202.
Glasbey CA.  2009.  Two-dimensional generalisations of dynamic programming for image analysis. Statistics and Computing. 19:49-56.
Haupt S, Cowan GH, Ziegler A, Roberts AG, Oparka KJ, Torrance L.  2005.  Two plant-viral movement proteins traffic in the endocytic recycling pathway. Plant Cell. 17:164-181. Abstract
Saldarelli P, Castellano MA, Harrison BD, Martelli GP.  2005.  Two grapevine viruses in an ornamental Vitis species from Scotland. Journal of Plant Pathology. 87:-76. Abstract
Joshi MV, Mann SG, Antelmann H, Widdick DA, Fyans JK, Chandra G, Hutchings MI, Toth IK, Hecker M, Loria R et al..  2010.  The twin arginine protein transport pathway exports multiple virulence proteins in the plant pathogen Streptomyces scabies. Molecular Microbiology. 77:252-271.
Bahar B, Moloney AP, Monahan FJ, Harrison SM, Zazzo A, Scrimgeour CM, Begley IS, Schmidt O.  2009.  Turnover of carbon, nitrogen and sulfur in bovine longissimus dorsi and psoas major muscles: Implications for isotopic authentication of meat. Journal of Animal Science. 87:905-913.
Raven JA, Crane P.  2007.  Trees. Current Biology. 17:R303-R304. Abstract
Raven JA.  2008.  Transpiration: how many functions? New Phytologist. 179:905-908. Abstract
Whisson SC, Boevink P, Moleleki LN, Avrova AO, Morales JG, Gilroy EM, Armstrong MR, Grouffaud S, van West P, Chapman S et al..  2007.  A translocation signal for delivery of oomycete effector proteins into host plant cells. Nature. 450:115-118. Abstract
Canto T, Uhrig JF, Swanson MM, Wright KM, MacFarlane SA.  2006.  Translocation of the Tomato bushy stunt virus P19 protein into the nucleus by ALY proteins compromises its silencing suppressor activity. Journal of Virology. 80:9064-9072. Abstract
Ellis CJ, Crittenden PD, Scrimgeour CM, Ashcroft CJ.  2005.  Translocation of 15N indicates nitrogen recycling in the mat-forming lichen Cladonia portentosa. New Phytologist. 168:423-434. Abstract
Richter A, Jacobsen H-J, de Kathen A, de Lorenzo G, Briviba K, Hain R, Ramsay G, Kiesecker H.  2006.  Transgenic peas (Pisum sativum) expressing polygalacturonase inhibiting protein from raspberry (Rubus idaeus) and stilbene synthase from grape (Vitis vinifera). Plant Cell Reports. 25:1166-1173. Abstract
van Dijk JP, Cankar K, Scheffer SJ, Beenen HGJ, Shepherd LVT, Stewart D, Davies HV, Wilcockson SJ, Leifert C, Gruden K et al..  2009.  Transcriptome analysis of potato tubers - effects of different agricultural practices. Journal of Agricultural and Food Chemistry. 57:1612-1623. Abstract
Potokina E, Druka A, Luo ZW, Waugh R, Kearsey MJ.  2009.  The transcriptome analysis of barley (Hordeum vulgare L.) using the Affymetrix Barley1 GeneChip. Russian Journal of Genetics. 45:1317-1328.
Foito A, Byrne SL, Shepherd T, Stewart D, Barth S.  2009.  Transcriptional and metabolic profiles of Lolium perenne L. genotypes in response to a PEG induced water stress. Plant Biotechnology Journal. 7:719-732.
Potokina E, Druka A, Kearsey MJ.  2009.  Transcript profiling and expression level mapping. Methods in Molecular Biology. 513:81-92.
Ballingall KT, Rocchi M, McKeever DJ, Wright F.  2010.  Trans-species polymorphism and selection in the MHC class II DRA genes of domestic sheep. PLoS One. 5:-e11402.
Birch PRJ, Rehmany AP, Pritchard L, Kamoun S, Beynon JL.  2006.  Trafficking arms: oomycete effectors enter host plant cells. Trends in Microbiology. 14:8-11. Abstract
Cooke DEL.  2007.  Tracking the sudden oak death pathogen. Molecular Ecology. 16:3735-3736.
Tilsner J, Oparka KJ.  2010.  Tracking the green invaders: advances in imaging virus infection in plants. Biochemical Journal. 430:21-37.
Margaritopoulos JT, Kasprowicz L, Malloch GL, Fenton B.  2009.  Tracking the global dispersal of a cosmopolitan insect pest, the peach potato aphid. BMC Ecology. 9:-13. Abstract
Edwards D, Li CS, Raven JA.  2006.  Tracheids in an early vascular plant: a tale of two branches. Botanical Journal of the Linnean Society. 150:115-130. Abstract
Birch PRJ, Armstrong MR, Bos J, Boevink P, Gilroy EM, Taylor RM, Wawra S, Pritchard L, Conti L, Ewan R et al..  2009.  Towards understanding the virulence functions of RXLR effectors of the oomycete plant pathogen Phytophthora infestans (Review). Journal of Experimental Botany. 60:1133-1140.
Druka A, Druka I, Centeno AG, Li H, Sun Z, Thomas WTB, Bonar N, Steffenson BJ, Ullrich SE, Kleinhofs A et al..  2008.  Towards systems genetic analyses in barley: Integration of phenotypic, expression and genotype data into GeneNetwork. BMC Genetics. 9:-73. Abstract
McDougall GJ, Martinussen I, Stewart D.  2008.  Towards fruitful metabolomics: High throughput analyses of polyphenol composition in berries using direct infusion mass spectrometry. Journal of Chromatography B. 871:362-369. Abstract
Grouffaud S, Whisson SC, Birch PRJ, van West P.  2010.  Towards an understanding of how RxLR-effector proteins are translocated from oomycetes into host cells. Fungal Genetics Reviews. 24:27-36.
Milne I, Lindner D, Bayer M, Husmeier D, McGuire G, Marshall DF, Wright F.  2009.  TOPALi v2: a rich graphical interface for evolutionary analyses of multiple alignments on HPC clusters and multi-core desktops. Bioinformatics. 25:126-127.
Cooke DEL, Schena L, Cacciola SO.  2007.  Tools to detect, identify and monitor Phytophthora species in natural ecosystems. Journal of Plant Pathology. 89:13-28. Abstract
Mueller LA, Tanksley SD, Giovannoni JJ, van Eck J, Stack S, Choi D, Kim BD, Chen M, Cheng Z, Li C et al..  2005.  The tomato sequencing project, the first cornerstone of the international Solanaceae project (SOL). Comparative and Functional Genomics. 6:153-158. Abstract
van den Berg N, Berger DK, Hein I, Birch PRJ, Wingfield MJ, Viljoen A.  2007.  Tolerance in banana to Fusarium wilt is associated with early up-regulation of cell wall-strengthening genes in the roots. Molecular Plant Pathology. 8:333-341. Abstract
MacFarlane SA.  2010.  Tobraviruses - plant pathogens and tools for biotechnology (Review). Molecular Plant Pathology. 11:577-583.
Potokina E, Druka A, Luo ZW, Moscou M, Wise R, Waugh R, Kearsey MJ.  2008.  Tissue-dependent limited pleiotropy affects gene expression in barley. Plant Journal. 56:287-296.
Chichkova NV, Galiullina RA, Taliansky ME, Vartapetian AB.  2008.  Tissue disruption activates a plant caspase-like protease with TATD cleavage specificity. Plant Stress. 2:89-95. Abstract
Tilston EL, Halpin C, Hopkins DW.  2008.  Tissue culture propagation alters plant-microbe interactions in tobacco rhizosphere. Biology and Fertility of Soils. 44:897-901. Abstract
Gregorich EG, Rochette P, Hopkins DW, McKim UF, St-Georges P.  2006.  Tillage-induced environmental conditions in soil and substrate limitation determine biogenic gas production. Soil Biology & Biochemistry. 38:2614-2628. Abstract
Goodall N, Kisiswa L, Prashar A, Faulkner S, Tokarczuk P, Singh K, Erichsen JT, Guggenheim J, Halfter W, Wride MA.  2009.  Three-dimensional modelling of chick embryo eye development and growth using high resolution magnetic resonance imaging. Experimental Eye Research. 89:511-521.
Feeney D, Crawford JW, Daniell TJ, Hallett PD, Nunan N, Ritz K, Rivers M, Young IM.  2006.  Three-dimensional microorganisation of the soil-root-microbe system. Microbial Ecology. 52:151-158. Abstract
Harrison SM, Monahan FJ, Zazzo A, Bahar B, Moloney AP, Scrimgeour CM, Schmidt O.  2007.  Three-dimensional growth of bovine hoof as recorded by carbon stable isotope ratios. Rapid Communications in Mass Spectrometry. 21:3971-3976. Abstract
Trudgill DL, Honek A, Li D, van Straalen NM.  2005.  Thermal time - concepts and utility. Annals of Applied Biology. 146:1-14. Abstract
Jones HG, Serraj R, Loveys BR, Xiong LH, Wheaton A, Price AH.  2009.  Thermal infrared imaging of crop canopies for the remote diagnosis and quantification of plant responses to water stress in the field.. Functional Plant Biology. 36:978-989.
Stoll M, Jones HG.  2007.  Thermal imaging as a viable tool for monitoring plant stress. Journal International des Sciences de la Vigne et du Vin. 41:77-84.
Hackett CA, Milne I, Bradshaw JE, Luo ZW.  2007.  TetraploidMap for Windows: Linkage map construction and QTL mapping in autotetraploid species. Journal of Heredity. 98:727-729. Abstract
Hurd CL, Hepburn CD, Currie KI, Raven JA, Hunter KA.  2009.  Testing the effects of ocean acidification on algal metabolism: considerations for experimental designs. Journal of Phycology. 45:1236-1251.
Wright HW, Bartley K, Nisbet AJ, McDevitt RM, Sparks NHC, Brocklehurst S, Huntley JF.  2009.  The testing of antibodies raised against poultry red mite antigens in an in vitro feeding assay; preliminary screen for vaccine candidates. Experimental and Applied Acarology. 48:81-91.
Pearce MC, Chase-Topping ME, McKendrick IJ, Mellor DJ, Locking ME, Allison L, Ternent HE, Matthews L, Knight HI, Smith AW et al..  2009.  Temporal and spatial patterns of bovine Escherichia coli O157 prevalence and comparison of temporal changes in the patterns of phage types associated with bovine shedding and human E. coli O157 cases in Scotland between 1998-2000 and 2002-2004. BMC Microbiology. 9:-276.
Wright KM, Wood NT, Roberts AG, Chapman S, Boevink P, MacKenzie K, Oparka KJ.  2007.  Targeting of TMV movement protein to plasmodesmata requires the actin/ER network: Evidence from FRAP. Addendum. Plant Signaling & Behaviour. 2:180-181. Abstract
Wright KM, Wood NT, Roberts AG, Chapman S, Boevink P, MacKenzie K, Oparka KJ.  2007.  Targeting of TMV movement protein to plasmodesmata requires the actin/ER network: Evidence from FRAP. Traffic. 8:21-31. Abstract
Broadley MR, White PJ, Hammond JP, Zelko I, Lux A.  2007.  Tansley Review. Zinc in plants. New Phytologist. 173:677-702. Abstract
Milne I, Bayer M, Cardle L, Shaw P, Stephen G, Wright F, Marshall DF.  2010.  Tablet - next generation sequence assembly visualization. Bioinformatics. 26:401-402.
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Niehl A, Lacomme C, Erban A, Kopka J, Kr U, Fisahn J.  2006.  Systemic Potato virus X infection induces defence gene expression and accumulation of . Functional Plant Biology. 33:593-604. Abstract
Wall DH, Adams BJ, Barrett JE, Hopkins DW, Virginia RA.  2006.  A synthesis of soil biodiversity and ecosystem functioning in Victoria Land, Antarctica. Soil Biology & Biochemistry. 38:3001-3002. Abstract
Lewsey MG, Gonz I, Kalinina NO, Palukaitis P, Canto T, Carr JP.  2010.  Symptom induction and RNA silencing suppression by the cucumber mosaic virus 2b protein. Plant Signaling & Behaviour. 5:705-708.
Viola R, Pelloux J, van der Ploeg A, Gillespie T, Marquis N, Roberts AG, Hancock RD.  2007.  Symplastic connection is required for bud outgrowth following dormancy in potato (Solanum tuberosum L.) tubers. Plant, Cell and Environment. 30:973-983. Abstract
Mess A, Squire GR, Perry JN, Angevin F, Gomez M, Townend P, Sausse C, Breckling B, Langrell S, Dzeroski S et al..  2009.  Sustainable introduction of GM crops into European agriculture: a summary report of the FP6 SIGMEA research project. Ol. 16:37-51.
Iannetta PPM, Begg GS, Valentine TA, Wishart J.  2010.  Sustainable disease control using weeds as indicators: Capsella bursa pastoris and Tobacco Rattle Virus. Weed Research. 50:511-514.
Newton AC, Duncan JM, Augustin NH, Guy DC, Cooke DEL.  2010.  Survival, distribution and genetic variability of inoculum of the strawberry red core pathogen, Phytophthora fragariae var. fragariae, in soil. Plant Pathology. 59:472-479.
Lee L, Kaplan IB, Ripoll DR, Liang D, Palukaitis P, Gray SM.  2005.  A surface loop of the potato leafroll virus coat protein is involved in virion assembly, systemic movement and aphid transmission.. Journal of Virology. 79:1207-1214. Abstract
Garc R, Ochoa V, Hinojosa MB, Carreira JA.  2008.  Suitability of enzyme activities for the monitoring of soil quality improvement in organic agricultural systems. Soil Biology & Biochemistry. 40:2137-2145. Abstract
Hammond JP, White PJ.  2008.  Sucrose transport in the phloem; integrating root responses to phosphorus starvation. Journal of Experimental Botany. 59:93-109. Abstract
Krivtsov V, Garside A, Brendler A, Liddell K, Griffiths BS, Staines HJ.  2007.  A study of population numbers and ecological interactions of soil and forest floor microfauna. Animal Biology. 57:467-484. Abstract
Shillam LL, Hopkins DW, Badalucco L, Laudicina VA.  2008.  Structural diversity and enzyme activity of volcanic soils at different stages of development and response to experimental disturbance. Soil Biology & Biochemistry. 40:2182-2185. Abstract
Weaver J, Briscoe T, Hou M, Goodman C, Kata S, Ross HA, McDougall GJ, Stewart D, Riches A.  2009.  Strawberry polyphenols are equally cytotoxic to tumourigenic and normal human breast and prostate cell lines. International Journal of Oncology. 34:777-786.
Tyler A, Hunter PD, Carvalho L, Codd GA, Elliott JA, Ferguson CA, Hanley ND, Hopkins DW, Maberly SC, Mearns KJ et al..  2009.  Strategies for monitoring and managing mass populations of toxic cyanobacteria in recreational waters: A multi-interdisciplinary approach. Environmental Health. 8 Supplement 1:-S11.
Neumann G, George TS, Plassard C.  2009.  Strategies and methods for studying the rhizosphere - the plant science toolbox. Plant and SoilPlant and Soil. 321:431-456.
Hodgson JG, Sharafi M, Jalili A, Diaz S, Montserrat-Marti G, Palmer C, Cerabolini B, Pierce S, Hamzehee B, Asri Y et al..  2010.  Stomatal vs. genome size in angiosperms: The somatic tail wagging the genomic dog? Annals of Botany. 105:573-584.
Brueggeman R, Druka A, Nirmala J, Cavileer T, Drader T, Rostoks N, Mirlohi A, Bennypaul H, Gill U, Kudrna D et al..  2008.  The stem rust resistance gene Rpg5 encodes a protein with nucleotide binding site, leucine-rich and protein kinase domains. Proceedings of the National Academy of Sciences, USA. 105:14970-14975. Abstract
Bohan DA, Hawes C, Haughton AJ, Denholm I, Champion GT, Perry JN, Clark SJ.  2007.  Statistical models to evaluate invertebrate-plant trophic interactions in arable systems. Bulletin of Entomological Research. 97:265-280. Abstract
Cerm J, Gasp J, De Lorenzi F, Jones HG.  2007.  Stand biometry and leaf area distribution in an old olive grove at Andria, southern Italy. Annals of Forest Science. 64:491-501. Abstract
Nisbet AJ, Redmond DL, Matthews JB, Watkins C, Yaga R, Jones JT, Nath M, Knox DP.  2008.  Stage-specific gene expression in Teladorsagia circumcincta (Nematoda: Strongylida) infective larvae and early parasitic stages. International Journal for Parasitology. 38:829-838. Abstract
Rangel-Castro JI, Killham K, Ostle N, Nicol GW, Anderson IC, Scrimgeour CM, Ineson P, Meharg A, Prosser JI.  2005.  Stable isotope probing analysis of the influence of liming on root exudate utilization by soil microrganisms. Environmental Microbiology. 7:828-838. Abstract
Farmer N, Meier-Augenstein W, Lucy D.  2009.  Stable isotope analysis of white paints and likelihood ratios. Science and Justice. 49:114-119. Abstract
Forbes GA, Chac MG, Kirk HG, Huarte MA, Van Damme M, Distel S, Mackay GR, Stewart HE, Lowe R, Duncan JM et al..  2005.  Stability of resistance to Phytophthora infestans in potato: an international evaluation. Plant Pathology. 54:364-372. Abstract
Chung BN, Canto T, Palukaitis P.  2007.  Stability of recombinant plant viruses containing genes of unrelated plant viruses. Journal of General Virology. 88:1347-1355. Abstract
Shi B-J, Symons RH, Palukaitis P.  2009.  Stability and competitiveness of interviral recombinant RNAs derived from a chimeric cucumovirus. Virus Research. 140:216-221. Abstract
Zhang X-S, Chase-Topping ME, McKendrick IJ, Savill NJ, Woolhouse MEJ.  2010.  Spread of E. coli O157 infection among Scottish cattle farms: Stochastic models and model selection. Epidemics. 2:11-20.
Ki LP, Felber F, Flavell AJ, Guadagnuolo R, Guiatti D, Hauser TP, Olivieri AM, Scotti I, Syed NH, Vischi M et al..  2009.  Spontaneous gene flow and population structure in wild and cultivated chicory, Cichorium intybus L.. Genetic Resources and Crop Evolution. 56:405-419.
Hornyik C, Terzi LC, Simpson GG.  2010.  The Spen family protein FPA controls alternative cleavage and polyadenylation of RNA. Developmental Cell. 18:203-213.
Rustenholz C, Hedley PE, Morris J, Choulet F, Feuillet C, Waugh R, Paux E.  2010.  Specific patterns of gene space organisation revealed in wheat by using the combination of barley and wheat genomic resources. BMC Genomics. 11:-714.
Polechov J, Barton N, Marion G.  2009.  Species' range: adaptation in space and time. American Naturalist. 174:E186-E204.
Glasbey CA, Allcroft DJ.  2008.  A spatiotemporal auto-regressive moving average model for solar radiation. Journal of the Royal Statistical Society Series C - Applied Statistics. 57:343-355. Abstract
Boag B, Deeks L, Orr A, Neilson R.  2005.  A spatio-temporal analysis of a New Zealand flatworm (Arthurdendyus triangulatus) population in western Scotland. Annals of Applied Biology. 147:81-88. Abstract
Orfanus T, Bedrna Z, Lichner L, Hallett PD, Knava K, Sebin M.  2008.  Spatial variability of water repellency in pine forest soil. Soil and Water. 3:S123-S129. Abstract
Moora M, Daniell TJ, Kalle H, Liira J, P K, Roosaluste E, Opik M, Wheatley RE, Zobel M.  2007.  Spatial pattern and species richness of boreonemoral forest understorey and its determinants - A comparison of differently managed forests. Forest Ecology & Management. 250:64-70. Abstract
Pickles BJ, Genney DR, Potts JM, Lennon JJ, Anderson IC, Alexander IJ.  2010.  Spatial and temporal ecology of Scots pine ectomycorrhizas. New Phytologist. 186:755-768.
Kasprowicz L, Malloch G, Pickup J, Fenton B.  2008.  Spatial and temporal dynamics of Myzus persicae clones in fields and suction traps. Agricultural and Forest Entomology. 10:91-100. Abstract
Begg GS, Cullen DW, Iannetta PPM, Squire GR.  2007.  Sources of uncertainty in the quantification of genetically modified oilseed rape contamination in seed lots. Transgenic Research. 16:51-63. Abstract
White PJ, Hammond JP.  2009.  The sources of phosphorus in the waters of Great Britain. Journal of Environmental Quality. 38:13-26. Abstract
Mahmood-ul-Hassan M, Akhtar MS, Gregory PJ.  2008.  Solute movement through intact columns of cryoturbated Upper Chalk. Hydrological Processes. 22:2086-2093. Abstract
Hopkins DW, Waite IS, McNicol JW, Poulton PR, MacDonald AJ, O'Donnell AG.  2009.  Soil organic carbon contents in long-term experimental grassland plots in the UK (Palace Leas and Park Grass) have not changed consistently in recent decades. Global Change Biology. 15:1739-1754. Abstract
Hartley IP, Hopkins DW, Garnett MH, Sommerkorn M, Wookey PA.  2008.  Soil microbial respiration in arctic soil does not acclimate to temperature. Ecology Letters. 11:1092-1100. Abstract
Griffiths BS, Caul S, Thompson J, Hackett CA, Cortet J, Pernin C, Krogh PH.  2008.  Soil microbial and faunal responses to herbicide tolerant maize and herbicide in two soils. Plant and Soil. 308:93-103. Abstract
Griffiths BS, Caul S, Thompson J, Birch ANE, Scrimgeour CM, Cortet J, Foggo A, Hackett CA, Krogh PH.  2006.  Soil microbial and faunal community responses to Bt maize and insecticide in two soils. Journal of Environmental Quality. 35:734-741. Abstract
Hassall M, Adl S, Berg M, Griffiths BS, Scheu S.  2006.  Soil fauna-microbe interactions: towards a conceptual framework for research. European Journal of Soil Biology. 42:S54-S60. Abstract
Stroud JL, Broadley MR, Foot I, Fairweather-Tait SJ, Hart DJ, Hurst R, Knott P, Mowat H, Norman K, Scott P et al..  2010.  Soil factors affecting selenium concentration in wheat grain and the fate and speciation of Se fertilisers applied to soil. Plant and Soil. 332:19-30.
McKenzie BM, K S, MacKenzie K, Peth S, Horn R.  2009.  Soil compaction by uniaxial loading and the survival of the earthworm Aporrectodea caliginosa. Soil and Tillage Research. 104:320-323.
Bingham IJ, Bengough AG, Rees RM.  2010.  Soil compaction - N interactions in barley: Root growth and tissue composition. Soil and Tillage Research. 106:241-246.
Velikova V, Edreva AM, Tsonev T, Jones HG.  2007.  Singlet oxygen quenching by phenylamides and their parent compounds. Zeischrift f. 62c:833-838.
Bradshaw JE, Titley M, Wilson RN.  2009.  Single seed descent as a breeding method for swedes (Brassica napus L. var. napobrassica Peterm). Euphytica. 169:387-401.
Rostoks N, Borevitz JO, Hedley PE, Russell JR, Mudie S, Morris J, Cardle L, Marshall DF, Waugh R.  2005.  Single feature polymorphism discovery in the barley transcriptome. Genome Biology. 6:-R54. Abstract
Spooner DM, McLean K, Ramsay G, Waugh R, Bryan GJ.  2005.  A single domestication for potato based on multilocus amplified fragment length polymorphism genotyping. Proceedings of the National Academy of Sciences, USA. 102:14694-14699. Abstract
Wood JC, McKendrick IJ, Gettingby G.  2007.  A simulation model to assess herd-level intervention strategies against E. coli O157. Epidemiology and Infection. 135:749-764. Abstract
Stafne ET, Clark JR, Weber CA, Graham J, Lewers KS.  2005.  Simple sequence repeat (SSR) markers for genetic mapping of raspberry and blackberry. Journal of the American Society of Horticultural Science. 130:722-728. Abstract
Dyckmans J, Scrimgeour CM, Schmidt O.  2005.  A simple and rapid method for labelling earthworms with 15N and 13C. Soil Biology & Biochemistry. 37:989-993. Abstract
Praveen S, Ramesh SV, Mishra AK, Koundal V, Palukaitis P.  2010.  Silencing potential of viral-derived RNAi constructs in Tomato leaf curl virus-AC4 gene suppression in tomato. Transgenic Research. 19:45-55.
Zhan J, Torriani SFF, McDonald BA.  2007.  Significant difference in pathogencity between MAT1-1 and MAT1-2 isolates in the wheat pathogen Mycosphaerella graminicola.. Fungal Genetics and Biology. 44:339-346. Abstract
Carr JP, Lewsey MG, Palukaitis P.  2010.  Signaling in induced resistance. Advances in Virus Research. 76:57-121.
Maestre FT, Bowker M, Puche MD, Bowker M, Hinojosa MB, Mart I, Garc P, Castillo AP, Soliveres S, Luzuriaga AL et al..  2009.  Shrub encroachment can reverse desertification in semi-arid Mediterranean grasslands. Ecology Letters. 12:930-941. Abstract
Jones MR, Raven JA, Leith ID, Cape JN, Smith RI, Fowler D.  2008.  Short-term flux chamber experiment to quantify the deposition of gaseous 15N-NH3 to Calluna vulgaris. Agricultural and Forest Meteorology. 148:893-901. Abstract
Broadley MR, O'Lochlainn S, Hammond JP, Bowen HC, Cakmak I, Eker S, Erdem H, King GJ, White PJ.  2010.  Shoot zinc (Zn) concentration varies widely within Brassica oleracea L. and is affected by soil Zn and phosphorus (P) levels. Journal of Horticultural Science & Biotechnology. 85:375-380.
Hammond JP, Broadley MR, White PJ, King GJ, Bowen HC, Hayden R, Meacham MC, Mead A, Overs T, Spracklen WP et al..  2009.  Shoot yield drives phosphorus use efficiency in Brassica oleracea and correlates with root architecture traits. Journal of Experimental Botany. 60:1953-1965.
Broadley MR, Hammond JP, King GJ, Astley D, Bowen HC, Meacham MC, Mead A, Pink DAC, Teakle G, Hayden R et al..  2008.  Shoot calcium and magnesium concentrations differ between subtaxa, are highly heritable, and associate with potentially pleiotropic loci in Brassica oleracea. Plant Physiology. 146:1707-1720. Abstract
Nunan N, Singh B, Reid E, Ord B, Papert A, Squires J, Prosser JI, Wheatley RE, McNicol JW, Millard P.  2006.  Sheep-urine-induced changes in soil microbial community structure. FEMS Microbiology Ecology. 56:310-320. Abstract
Luo ZW, Potokina E, Druka A, Wise R, Waugh R, Kearsey MJ.  2007.  SFP genotyping from Affymetrix arrays is robust but largely detects cis-acting expression regulators. Genetics. 176:789-800. Abstract
Visser RGF, Bachem CWB, de Boer JM, Bryan GJ, Chakrabati SK, Feingold S, Gromadka R, van Ham RCHJ, Huang SW, Jacobs JME et al..  2009.  Sequencing the potato genome: Outline and first results to come from the elucidation of the sequence of the world's most important food crop. American Journal of Potato Research. 86:417-429.
Raven JA.  2006.  Sensing inorganic carbon: C02 and HCO3. Biochemical Journal. 396:e5-e7.
Broadley MR, Alcock J, Alford J, Cartwright P, Foot I, Fairweather-Tait SJ, Hart DJ, Hurst R, Knott P, McGrath SP et al..  2010.  Selenium biofortification of high-yielding winter wheat (Triticum aestivum L.) by liquid or granular Se fertilisation. Plant and Soil. 332:5-18.
Lewsey M, Robertson FC, Canto T, Palukaitis P, Carr JP.  2007.  Selective targeting of miRNA-regulated plant development by a viral counter-silencing protein. Plant Journal. 50:240-252. Abstract
Holeva RC, Brown DJF, Curtis RHC, Neilson R.  2008.  Selective recovery of the virus-vector trichodorid nematode Paratrichodorus anemones from soil samples by immunomagnetic capture. European Journal of Plant Pathology. 120:85-89. Abstract
Leitch ECM, Walker AW, Duncan SH, Holtrop G, Flint HJ.  2007.  Selective colonization of insoluble substrates by human faecal bacteria. Environmental Microbiology. 9:667-679. Abstract
Armstrong MR, Husmeier D, Phillips MS, Blok VC.  2007.  Segregation and recombination of a multipartite mitochondrial DNA in populations of the potato cyst nematode Globodera pallida. Journal of Molecular Evolution. 64:689-701. Abstract
Lehrach WP, Husmeier D.  2009.  Segmenting bacterial and viral DNA sequence alignments with a trans-dimensional phylogenetic factorial hidden Markov model. Journal of the Royal Statistical Society Series C - Applied Statistics. 58:307-327.
Andrews M, Maule HG, Hodge S, Cherrill A, Raven JA.  2009.  Seed dormancy, nitrogen nutrition and shade acclimation of Impatiens glandulifera: implications for its successful invasion of a deciduous woodland. Plant Ecology and Diversity. 2:145-153.
Montero-Serrano JC, Palarea-Albaladejo J, Martin-Fern JA, Mart M, Guti JV.  2010.  Sedimentary chemofacies characterization by means of multivariate analysis. Sedimentary Geology. 228:218-228.
Bahar B, Schmidt O, Moloney AP, Scrimgeour CM, Begley IS, Monahan FJ.  2008.  Seasonal variation in the C, N and S stable isotope composition of retail organic and conventional Irish beef. Food Chemistry. 106:1299-1305. Abstract
Mitchell A, Oommen M, Bhatia P, Scott P, Robertson ZC, Stewart D, McDougall GJ, Wallace HM.  2007.  Scottish berries - potential for dietary chemoprevention? Scottish Medical Journal. 52:54-54. Abstract
Cock PJA, Fields CJ, Goto N, Heuer ML, Rice PM.  2010.  The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants. Nucleic Acids Research. 38:1767-1771.
Horgan GW.  2007.  Sample size and replication in 2D gel electrophoresis studies. Journal of Proteome Research. 6:2884-2887. Abstract
Crampton BG, Hein I, Berger DK.  2009.  Salicylic acid confers resistance to a biotrophic rust pathogen, Puccinia substriata, in pearl millet (Pennisetum glaucum). Molecular Plant Pathology. 10:291-304.
Poulsen M, Schroder M, Wilcks A, Kroghsbo S, Lindecrona RH, Miller A, Frenzel T, Danier J, Rychlik M, Shu QY et al..  2007.  Safety testing of GM-rice expressing PHA-E lectin using a new animal test design. Food and Chemical Toxicology. 45:364-377. Abstract
Kuiper HA, Davies HV.  2010.  The SAFE FOODS risk analysis framework suitable for GMOs? A case study. Food Control. 21:1662-1676.
K A, Kuiper HA, Marvin HJP, Boon PE, Busk L, Cnudde FC, Cope S, Davies HV, Dreyer M, Frewer LJ et al..  2010.  The SAFE FOODS framework for improved risk analysis of foods. Food Control. 21:1566-1587.
R
Mylnikov SV, Kokko H, K SO, Oparina TI, Davies HV, Stewart D.  2005.  Rubus fruit juices affect lipid peroxidation in a Drosophila melanogaster model in vivo.. Journal of Agricultural and Food Chemistry. 53:7728-7733. Abstract
McGavin WJ, MacFarlane SA.  2009.  Rubus chlorotic mottle virus, a new Sobemovirus infecting raspberry and bramble. Virus Research. 139:10-13. Abstract
Kylli P, Nohynek L, Puupponen-Pimia R, Westerlund-Wikstrom B, McDougall GJ, Stewart D, Heinonen M.  2010.  Rowanberry phenolics: compositional analysis and bioactivites. Journal of Agricultural and Food Chemistry. 58:11985-11992.
Toth IK, Birch PRJ.  2005.  Rotting softly and stealthily. Current Opinion in Plant Biology. 8:424-429.
Gregory PJ.  2006.  Roots, rhizosphere and soil: the route to a better understanding of soil science? European Journal of Soil Science. 57:2-12. Abstract
de Dorlodot S, Forster BP, Pag L, Price AH, Tuberosa R, Draye X.  2007.  Root system architecture: opportunities and constraints for genetic improvement of crops. Trends in Plant Science. 12:474-481. Abstract
Bengough AG, Bransby MF, Hans J, McKenna SJ, Roberts TJ, Valentine TA.  2006.  Root responses to soil physical conditions; growth dynamics from field to cell. Journal of Experimental Botany. 57:437-447. Abstract
Gregory PJ, Bengough AG, Grinev DV, Schmidt S, Thomas WTB, Wojciechowski T, Young IM.  2009.  Root phenomics of crops - opportunities and challenges. Functional Plant Biology. 36:922-929.
Dupuy L, Gregory PJ, Bengough AG.  2010.  Root growth models: Towards a new generation of continuous approaches. Journal of Experimental Botany. 61:2131-2143.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.