Publications list
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The complete sequence of a UK strain of Black raspberry necrosis virus. Archives of Virology. 155:1897-1899.
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2010.
Concentration-dependent NH3 deposition processes for mixed moorland semi-natural vegetation. Atmospheric Environment. 41:2049-2060. Abstract
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2007.
Concentration-dependent NH3 deposition processes for stomatal and non-stomatal moorland species. Atmospheric Environment. 41:8990-8994. Abstract
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2007.
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2009.
Concordant evolution of mitochondrial and nuclear genomes in the wheat pathogen Phaeosphaeria nodurum. Fungal Genetics and Biology. 44:764-772. Abstract
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2007.
Consequences for a host-parasitoid interaction of host-plant aggregation, isolation and phenology. Ecological Entomology. 32:419-427. Abstract
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2007.
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2006.
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2007.
Consequences of intraspecific variation for the structure and function of ecological communities Part 2: Linking diversity and function. Ecological Modelling. 207:277-285. Abstract
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2007.
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2005.
Constructing genetic linkage maps under a tetrasomic model. Genetics. 172:2635-2645. Abstract
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2006.
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2006.
Contribution of gut microbial lysine to liver and milk amino acids in lactating does. British Journal of Nutrition. 100:977-983.
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2008.
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2009.
Control of bovine tuberculosis in British livestock: there is no 'silver bullet'. Trends in Microbiology. 16:420-427. Abstract
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2008.
Controls on the distribution of productivity and organic resources in Antarctic dry valley soils (Review). Proceedings of the Royal Society B. 273:2687-2695. Abstract
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2006.
Coordination of plant cell division and expansion in a simple morphogenetic system. Proceedings of the National Academy of Sciences, USA. 107:2711-2716.
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2010.
Coupling the GAL4 UAS system with alcR for versatile cell type-specific chemically inducible gene expression in Arabidopsis. Plant Biotechnology Journal. 5:465-476. Abstract
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2007.
Critical issues in trace gas biogeochemistry and global change. Philosophical Transactions of the Royal Society A - Mathematical Physical and Engineering Sciences. 365:1629-1642. Abstract
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2007.
A critical review of current methods in earthworm ecology: From individuals to populations (Review). European Journal of Soil Biology. 46:67-73.
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2010.
Cryptic photosynthesis - extrasolar planetary oxygen without a surface biological signature. Astrobiology. 9:623-636.
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2009.
Cucumber mosaic virus 2a polymerase and 3a movement proteins independently affect both virus movement and the timing of symptom development in zucchini squash. Journal of General Virology. 86:1213-1222. Abstract
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2005.
Cucumber mosaic virus 2b protein subcellular targets and interactions: Their significance to RNA silencing suppressor activity. Molecular Plant-Microbe Interactions. 23:294-303.
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2010.
The cucumovirus 2b gene drives selection of inter-viral recombinants affecting the crossover site, the acceptor RNA and the rate of selection. Nucleic Acids Research. 36:1057-1071. Abstract
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2008.
Cumulative impact of GM herbicide-tolerant cropping on arable plants assessed through species-based and functional taxonomies. Environmental Science and Pollution Research. 16:85-94. Abstract
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2009.
Current developments on the inhibitory effects of berry polyphenols on digestive enzymes. Biofactors. 34:73-80. Abstract
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2008.
Cyanotoxins: A poison that frees phosphate. Current Biology. 20:R850-R852.
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2010.
Cylindrical inclusion protein of potato virus A is associated with a subpopulation of particles isolated from infected plants. Journal of General Virology. 89:829-838. Abstract
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2005.
The dark side of the mycorrhiza. Plant Signaling & Behavior. 5:1019-1021.
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2010.
Darwin - a mission to detect and search for life on extrasolar planets. Astrobiology. 9:1-22.
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2009.
Decomposition in soil and chemical characteristics of pollen. European Journal of Soil Science. 59:551-558. Abstract
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2008.
Decomposition in soil of soluble, insoluble and lignin-rich fractions of plant material from tobacco with genetic modifications to lignin biosynthesis. Soil Biology & Biochemistry. 37:751-760. Abstract
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2005.
Decomposition processes under Bt (Bacillus thuringiensis) maize: results of a multi-site experiment. Soil Biology & Biochemistry. 38:195-199. Abstract
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2006.
Deep rooting and drought screening of cereal crops: A novel field-based method and its application.. Field Crops Research. 112:165-171. Abstract
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2009.
Delivery of macromolecules to plant parasitic nematodes using a tobacco rattle virus vector. Plant Biotechnology Journal. 5:827-834. Abstract
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2007.
The demography of feral alfalfa (Medicago sativa L.) populations occurring in road side habitats in southern Manitoba Canada: Implications for novel trait confinement. Environmental Science and Pollution Research. 17:1448-1459.
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2010.
Depletion of organic phosphorus from Oxisols in relation to phosphatase activities in the rhizosphere. European Journal of Soil Science. 57:47-57. Abstract
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2006.
Deployment of diversity for enhanced crop function. Annals of Applied Biology. 154:309-322. Abstract
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2009.
Depolarisation-activated calcium channels shape the calcium signatures induced by low-temperature stress. New Phytologist. 183:6-8.
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2009.
Describing soil crack formation using elastic-plastic fracture mechanics. European Journal of Soil Science. 56:31-38. Abstract
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2005.
Desirable plant root traits for protecting natural and engineered slopes against landslides (Invited review). Plant and Soil. 324:1-30.
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2009.
A detailed linkage map of lettuce based on SSAP, AFLP and NBS markers. Theoretical and Applied Genetics. 112:517-527. Abstract
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2006.
Detecting interspecific recombination with a pruned probabilistic divergence measure. Bioinformatics. 21:1797-1806. Abstract
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2005.
Detection and quantification of Phytophthora ramorum, P. kernoviae, P. citricola and P. quercina in symptomatic leaves by multiplex real-time PCR. Molecular Plant Pathology. 7:365-379. Abstract
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2006.
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2006.
Detection of lactobacillic acid in low erucic rapeseed oil - A note of caution when quantifying cyclic fatty acid monomers in vegetable oils. Chemistry and Physics of Lipids. 163:698-702.
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2010.
Detection of the nec1 virulence gene and its correlation with pathogenicity in Streptomyces species on potato tubers and in soil using conventional and realtime PCR. Journal of Applied Microbiology. 102:1082-1094. Abstract
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2007.
Determination of soil hydraulic conductivity with the lattice Boltzmann method and soil thin-section technique. Journal of Hydrology. 306:59-70.
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2005.
Determining the spirit yield of wheat varieties and variety mixtures. Journal of Cereal Science. 42:127-134. Abstract
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2005.
Developing a reliable strategy to infer the effective soil hydraulic properties from field evaporation experiments for agro-hydrological models. Agricultural Water Management. 97:399-409.
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2010.
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2008.
Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics. 10:-582.
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2009.
Development and mapping of DArT markers within the Festuca - Lolium complex. BMC Genomics. 10:-473.
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2009.
Development and quality of cloudberry (Rubus chamaemorus L) as affected by female parent, male parent and temperature. Journal of Berry Research. 1:91-101.
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2010.
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2007.
Development and validation of gas chromatography and real-time quantitative PCR for the quantification of landscape-scale gene flow from varieties of high erucic acid (HEAR) oilseed rape. Journal of the Science of Food and Agriculture. 88:2253-2264. Abstract
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2008.
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2008.
Development of a molecular cytogenetic recombination assay for barley. Cytogenetic and Genome Research. 129:154-161.
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2010.
The development of a PCR-based marker linked to resistance to the blackcurrant gall mite (Cecidophyopsis ribis Acari: Eriophyidae). Theoretical and Applied Genetics. 118:205-211. Abstract
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2009.
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2005.
Development of a virus-induced gene silencing system in pearl millet. South African Journal of Botany. 73:339-339. Abstract
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2007.
Development of diagnostic markers for use in breeding potatoes resistance to Globodera pallida pathotype Pa2/3 using germplasm derived from Solanum tuberosum ssp. andigena CPC 2802. Theoretical and Applied Genetics. 120:679-689.
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2010.
Development of EST-derived microsatellite markers for Arabidopsis lyrata subspecies petraea (L.). Molecular Ecology Notes. 7:631-634. Abstract
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2007.
The development of immune responses in Balb/c mice following inoculation with attenuated or virulent Neospora caninum tachyzoites. Parasite Immunology. 31:392-401.
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2009.
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2006.
Development of retrotransposon-based SSAP molecular marker system for study of genetic diversity in sea holly (Eryngium maritimum L.). Plant Genetic Resources - Characterization and Utilization. 8:258-266.
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2010.
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2005.
Development of specific PCR primers for identification and detection of Phytophthora capsici Leon. European Journal of Plant Pathology. 112:43-52.
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2005.
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2005.
Different polyphenolic components of soft fruits inhibit . Journal of Agricultural and Food Chemistry. 53:2760-2766. Abstract
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2005.
Differential effect of arbuscular mycorrhizal fungal communities from ecosystems along management gradient on the growth of forest understorey plant species. Soil Biology & Biochemistry. 41:2141-2146.
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2009.
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2010.
Differential interaction of Aspergillus niger and Peniophora lycii phytases with soil particles affects the hydrolysis of inositol phosphates. Soil Biology & Biochemistry. 39:793-803. Abstract
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2007.
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2006.
Differentiation in two populations of Meloidogyne incognita from Greece in relation to reproduction on resistant tomato and pepper. Journal of Plant Diseases and Protection. 114:276-277. Abstract
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2007.
Digestion and transportation of bovine spongiform encephalopathy-derived prion protein in the sheep intestine. Journal of General Virology. 91:3116-3123.
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2010.
Dihydrocaffeoyl polyamines (kukoamine and allies) in potato (Solanum tuberosum) tubers detected during metabolite profiling. Journal of Agricultural and Food Chemistry. 53:5461-5466. Abstract
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2005.
Direct targeting and rapid isolation of BAC clones spanning a defined chromosome region. Functional & Integrative Genomics. 5:97-103. Abstract
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2005.
Discerning intra-tuber differences in textural properties in cooked Solanum tuberosum group Tuberosum and group Phureja tubers. Journal of the Science of Food and Agriculture. 90:1527-1532.
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2010.
Disentangling the impact of AM fungi versus roots on soil structure and water transport. Plant and Soil. 314:183-196. Abstract
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2009.
Dissipation and maintenance of stable states in an enzymatic system: analysis and simulation. Biophysical Chemistry. 120:207-214. Abstract
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2006.
Distinguishing major-gene from field resistance to late blight (Phytophthora infestans) of potato (Solanum tuberosum) and selecting for high levels of field resistance. Theoretical and Applied Genetics. 115:141-149. Abstract
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2007.
Diversity of human colonic butyrate-producing bacteria revealed by analysis of the butyryl-CoA:acetate CoA-transferase gene. Environmental Microbiology. 12:304-314.
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2010.
DNA extraction from soil nematodes for multi-sample community studies. Applied Soil Ecology. 38:20-26. Abstract
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2008.
Do bacterial-feeding nematodes stimulate root proliferation through hormonal effects? Soil Biology & Biochemistry. 39:1816-1819. Abstract
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2007.
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2010.
Does biotechnology have a role in the promotion of underutilised crops? Food Policy. 34:319-328.
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2009.
Does light exposure make plant litter more degradable? Plant and Soil. 333:275-285.
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2010.
Does microbial habitat or community structure drive the functional stability of microbes to stresses following re-vegetation of a severely degraded soil? Soil Biology and Biochemistry. 42:850-859.
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2010.
Domain organization of the N-terminal portion of hordeivirus movement protein TGBp1. Journal of General Virology. 90:3022-3032.
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2009.
Domain-decomposition method for parallel lattice Boltzmann simulation of incompressible flow in porous media. Physical Review E. 72:016706-1-016706-11. Abstract
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2005.
Doubled haploids in genetics and plant breeding. Plant Breeding Reviews. 25:57-80. Abstract
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2005.
Doubled haploidy and induced mutation. Euphytica. 158:359-370. Abstract
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2007.
DRASTIC-INSIGHTS: Querying information in a plant gene expression database. Nucleic Acids Research. 34:D712-D716. Abstract
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2006.
Drought-induced nitrous oxide flux dynamics in an enclosed tropical forest. Global Change Biology. 11:1247-1257. Abstract
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2005.
DsbA plays a critical and multifaceted role in the production of secreted virulence factors by the phytopathogen, Erwinia carotovora subsp. atroseptica. Journal of Biological Chemistry. 283:23739-23753. Abstract
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2008.
Dual effects of plant steroidal alkaloids on Saccharomyces cerevisiae. Antimicrobial Agents and Chemotherapy. 50:2732-2740.
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2006.
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2009.
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The dynamics of root meristem distribution in the soil. Plant Cell and Environment. 33:358-369.
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2010.
E unum pluribus: multiple proteins from a self-processing polyprotein. Trends in Biotechnology. 24:68-75. Abstract
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2006.
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2007.
Earthworms bring compacted and loose soils to a similar mechanical state. Soil Biology & Biochemistry. 41:656-658. Abstract
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2009.
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2009.
Eats roots and leaves. Can edible horticultural crops address dietary calcium, magnesium and potassium deficiencies? Proceedings of the Nutrition Society. 69:601-612.
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2010.
ECOGEN - Soil ecological and economic evaluation of genetically modified crops. Pedobiologia. 51:171-173. Abstract
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2007.
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2006.
Ecological study of the forest litter meiofauna of a unique Scottish woodland. Animal Biology. 56:69-93. Abstract
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2006.
Ecosystem feedbacks and cascade processes: understanding their role in the responses of Arctic and alpine ecosystems to environmental change. Global Change Biology. 15:1153-1172. Abstract
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2009.
Ectopic 5' splice sites inhibit gene expression by engaging RNA surveillance and silencing pathways in plants. Plant Physiology. 151:955-965.
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2009.
The effect of 1-methylcyclopropene (1-MCP) on the physical and biochemical characteristics of onion cv. SS1 bulbs during storage. Postharvest Biology and Technology. 44:131-140. Abstract
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2007.
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2008.
Effect of age and food intake on dietary carbon turnover recorded in sheep wool. Rapid Communications in Mass Spectrometry. 22:2937-2945. Abstract
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2008.
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2007.
Effect of dietary copper deficiency on iron metabolism in the pregnant rat. British Journal of Nutrition. 97:239-246. Abstract
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2007.
Effect of different cooking regimes on rhubarb polyphenols. Food Chemistry. 119:758-764.
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2010.
The effect of earthworms and liming on soil microbial communities. Biology and Fertility of Soils. 45:361-369. Abstract
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2009.
Effect of increased consumption of whole-grain foods on blood pressure and other cardiovascular risk markers in healthy middle-aged persons: a randomised controlled trial. American Journal of Clinical Nutrition. 94:733-740.
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2010.
Effect of inulin on the human gut microbiota: stimulation of Bifidobacterium adolescentis and Faecalibacterium prausnitzii. British Journal of Nutrition. 101:541-550.
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2009.
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2009.
Effect of method of conservation of timothy on endogenous nitrogen flows in lactating dairy cows. Journal of Dairy Science. 93:4252-4261.
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2010.
The effect of perceived environmental background on qualitative assessments of pig behaviour. Animal Behaviour. 78:477-484.
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2009.
Effect of salinity on water relations of wild barley plants differing in salt tolerance. AoB Plants. :-plq006.
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2010.
The effect of semi-dwarf genes on root system size in field-grown barley. Theoretical and Applied Genetics. 112:779-786. Abstract
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2006.
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2005.
The effect of starvation on the planarian Arthurdendyus triangulatus (Tricladida: Terricola) as measured by stable isotopes. Biology and Fertility of Soils. 43:267-270. Abstract
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2006.
The effect of the transition between controlled atmosphere and regular atmosphere storage on bulbs of onion cultivars SS1, Carlos and Renate. Postharvest Biology and Technology. 44:228-239. Abstract
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2007.
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2007.
Effects of ascertainment bias and marker number on estimations of barley diversity from high-throughput SNP genotype data. Theoretical and Applied Genetics. 120:1525-1534.
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2010.
Effects of CO2 on the searching behaviour of the root-feeding clover weevil Sitona lepidus (Coleoptera: Curculionidae). Bulletin of Entomological Research. 96:361-366. Abstract
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2006.
Effects of drought stress and its sudden relief on free radical processes in barley. Journal of the Science of Food and Agriculture. 85:47-53. Abstract
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2005.
The effects of dwarfing genes on seedling root growth of wheat. Journal of Experimental Botany. 60:2565-2573.
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2009.
Effects of foliar application of calcium nitrate on growth and physiological attributes of cowpea (Vigna unguiculata L.Walp.) grown under salt stress. Environmental and Experimental Botany. 58:188-196.
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2006.
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2006.
Effects of group composition on the grazing behaviour of herbivores. Animal Behaviour. 80:527-534.
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2010.
The effects of host age on follicular dendritic cell status dramatically impair scrapie agent neuroinvasion in aged mice. Journal of Immunology. 183:5199-5207.
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2009.
Effects of host social hierarchy on disease persistence. Journal of Theoretical Biology. 253:424-433. Abstract
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2008.
Effects of periodic input on the quasi-steady state: assumptions for enzyme-catalysed reaction. Journal of Mathematical Biology. 50:115-132.
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2005.
Effects of pyrite sludge pollution on soil enzyme activities: Ecological dose-response model. Science of the Total Environment. 396:89-99. Abstract
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2008.
Effects of season and postharvest storage on the carotenoid content of Solanum phureja potato tubers. Journal of Agricultural and Food Chemistry. 55:379-385. Abstract
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2007.
Effects of soil conditions and drought on egg hatching and larval survival of the clover root weevil (Sitona lepidus). Applied Soil Ecology. 44:75-79.
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2010.
The effects of soil horizons and faunal excrement on bacterial distribution in an upland grassland soil. FEMS Microbiology Ecology. 52:139-144. Abstract
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2005.
The effects of stress on plant epicuticular waxes. New Phytologist. 171:469-499. Abstract
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2006.
Effects of successive seasons of genetically modified herbicide-tolerant maize cropping on weeds and invertebrates. Annals of Applied Biology. 149:249-254. Abstract
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2006.
The effects of uneven patchy cultivar mixtures on disease control and yield in winter barley. Field Crops Research. 110:225-228. Abstract
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2009.
Effects of variety and fertiliser nitrogen on alcohol yield, grain yield, starch and protein content, and protein composition of winter wheat. Journal of Cereal Science. 48:46-57. Abstract
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2008.
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2005.
Effects on weed and invertebrate abundance and diversity of herbicide management in genetically modified herbicide-tolerant winter-sown oilseed rape. Proceedings of the Royal Society of London, Series B. 272:463-474. Abstract
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2005.
Efficiency of functional regression estimators for combining multiple laser scans of cDNA microarrays. Biometrical Journal. 51:45-55.
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2009.
Efficient generation of transgenic barley: The way forward to modulate plant-microbe interactions. Journal of Plant Physiology. 165:71-82. Abstract
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2008.
An efficient procedure for normalising ionomics data for Arabidopsis thaliana. New Phytologist. 186:270-274.
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2010.
Efflux pump gene expression in Erwinia chrysanthemi is induced by exposure to phenolic acids. Molecular Plant-Microbe Interactions. 20:313-320. Abstract
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2007.
Egg hatching and survival time of soil-dwelling insect larvae: a partial differential equation model and experimental validation. Ecological Modelling. 202:493-502. Abstract
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2007.
Elaidic acid, (trans-9-octadecenoic acid). Acta Crystallographica Section E-Structure Reports Online. E61:3730-3732. Abstract
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2005.
Elevated amino acid biosynthesis in Phytophthora infestans during appressorium formation and potato infection. Fungal Genetics and Biology. 42:244-256. Abstract
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2005.
Elevated CO2 and aboveground-belowground herbivory by the clover root weevil. Oecologia. 162:209-216.
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2010.
The emergence of whole genome association scans in barley. Current Opinion in Plant Biology. 12:218-222.
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2009.
Engineering ketocarotenoid biosynthesis in potato tubers. Metabolic Engineering. 8:253-263. Abstract
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2006.
Enhanced resistance and neutralization of defense responses by suppressors of RNA silencing. Virus Research. 130:103-109. Abstract
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2007.
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2010.
Environmental and seasonal influences on red raspberry anthocyanin antioxidant contents and identification of quantitative traits loci (QTL). Molecular Nutrition and Food Research. 53:625-634. Abstract
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2009.
Enzymatic activities and microbial communities in an Antarctic dry valley soil: Responses to C and N supplementation. Soil Biology & Biochemistry. 40:2130-2136. Abstract
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2008.
An eQTL analysis of partial resistance to Puccinia hordei in barley. PLoS One. 5:-e8598.
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2010.
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2009.
Erwinia chrysanthemi 3937 PhoQ sensor kinase regulates several virulence determinants. Journal of Bacteriology. 188:3088-3098. Abstract
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2006.
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2007.
Estimating stomatal conductance with thermal imagery. Plant Cell and Environment. 29:1508-1518.
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2006.
Estimating the annual number of breeding attempts from breeding dates using mixture models. Ecology Letters. 12:1184-1193.
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2009.
Estimating the motion of plant root cells from in vivo confocal laser scanning microscopy images. Machine Vision and Applications. 21:921-939.
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2010.
Estimation of centres and radial intensity profiles of spherical nano-particles in digital microscopy. Biometrical Journal. 49:300-311. Abstract
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2007.
Estimation of maize canopy properties from remote sensing by inversion of 1-D and 4-D models. Precision Agriculture. 11:319-334.
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2010.
Estimation of multiple transmission rates for epidemics in heterogeneous populations. Proceedings of the National Academy of Sciences, USA. 104:20392-20397. Abstract
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2007.
Estimation of wood density and chemical composition by means of Diffuse Reflectance Mid-Infrared Fourier Transform (DRIFT-MIR) spectroscopy. Journal of Agricultural and Food Chemistry. 54:34-40. Abstract
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2006.
Ethylene and carbon dioxide production by developing strawberries show a correlative pattern that is indicative of ripening climacteric fruit. Physiologia Plantarum. 127:247-259. Abstract
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2006.
Evaluating energy intake measurement in free-living subjects: when to record and for how long? Public Health Nutrition. 13:172-180.
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2010.
Evaluating soil stabilisation by biological processes using step-wise aggregate fractionation. Soil and Tillage Research. 102:209-215.
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2009.
Evaluation of a survey approach to estimating the prevalence of cattle carrying antimicrobial-resistant Escherichia coli. Veterinary Journal. 175:416-418. Abstract
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2008.
Evaluation of effects of transgenic Bt maize on microarthropods in a European multi-site experiment. Pedobiologia. 51:207-218. Abstract
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2007.
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2007.
Evaluation of the efficacy of clinical diagnosis of ovine pulmonary adenocarcinoma. Veterinary Record. 162:88-90. Abstract
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2008.
Evidence and evolutionary analysis of ancient whole-genome duplication in barley predating the divergence from rice. BMC Evolutionary Biology. 9:-209.
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2009.
Evidence of neutral transcriptome evolution in plants. New Phytologist. 180:587-593. Abstract
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2008.
Evidence that the recessive bymovirus resistance locus rym4 in barley corresponds to the eukaryotic translation initiation factor 4E gene. Molecular Plant Pathology. 6:449-458. Abstract
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2005.
The evolution of inorganic carbon concentrating mechanisms in photosynthesis. Philosophical Transactions of the Royal Society of London B - Biological Sciences. 363:2641-2650. Abstract
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2008.
The evolution of oligotrophy: implications for the breeding of crop plants for low input agricultural systems. Annals of Applied Biology. 146:261-280. Abstract
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2005.
Evolution of relative reading frame bias in unidirectional prokaryotic gene overlaps. Molecular Biology and Evolution. 27:753-756.
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2010.
Evolution of tree nutrition. Tree Physiology. 30:1050-1071.
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2010.
Evolutionary control of leaf element composition in plants. New Phytologist. 174:516-523. Abstract
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2007.
Ex vivo magnetic resonance imaging of crystalline lens dimensions in chicken. Molecular Vision. 16:144-153.
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2010.
Experimental determination of dietary carbon turnover in bovine hair and hoof. Canadian Journal of Zoology. 85:1239-1248. Abstract
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2007.
Exploiting induced variation to dissect quantitative traits in barley. Biochemical Society Transactions. 38:683-688.
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2010.
Exploiting knowledge of R/Avr genes to rapidly clone a new LZ-NBS-LRR family of late blight resistance genes from potato linkage group IV. Molecular Plant-Microbe Interactions. 22:630-641.
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2009.
Exploiting regulatory variation to identify genes underlying quantitative resistance to the wheat stem rust pathogen Puccinia graminis f. sp. tritici in barley. Theoretical and Applied Genetics. 117:261-272. Abstract
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2008.
Exploring cyanobacterial mutualisms. Annual Review of Ecology Evolution and Systematics. 38:255-273. Abstract
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2007.
Exploring relationships between phenological and weather data using smoothing. International Journal of Biometeorology. 52:463-470. Abstract
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2008.
Exploring thermal imaging variables for the detection of stress responses in grapevine under different irrigation regimes. Journal of Experimental Botany. 58:815-825. Abstract
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2007.