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2010
Christensen NM, Oparka KJ, Tilsner J.  2010.  Advances in imaging RNA in plants. Trends in Plant Science. 15:196-203.
Sprent JI, Odee DW, Dakora FD.  2010.  African legumes: A vital but under-utilised resource. Journal of Experimental Botany. 61:1257-1265.
Mauro-Herrera M, Meerow AW, Perera L, Russell JR, Schnell RJ.  2010.  Ambiguous genetic relationships among coconut (Cocos nucifera L.) cultivars: the effects of outcrossing, sample source and size, and method of analysis. Genetic Resources and Crop Evolution. 57:203-217.
Kim HW, Kim JB, Chu SM, Kim SY, Kim SN, Cho YS, Cho SM, Baek HJ, Park HJ, Lee DJ et al..  2010.  Analysis of anthocyanin composition and content contained from grains of the Korean purple rice varieties by liquid chromatography with diode array detection and electrospray ionization/mass spectrometry (LC-DAD-ESI/MS). Korean Journal of International Agriculture. 22:267-272.
Srinivasan DG, Fenton B, Jaubert-Possamai S, Jaouannet M.  2010.  Analysis of meiosis and cell cycle genes of the facultatively asexual pea aphid, Acyrthosiphon pisum (Hemiptera: Aphididae). Insect Molecular Biology. 19 Supplement s2:229-239.
Schornack S, Van Damme M, Bozkurt TO, Cano LM, Smoker M, Thines M, Gaulin E, Kamoun S, Huitema E.  2010.  Ancient class of translocated oomycete effectors targets the host nucleus. Proceedings of the National Academy of Sciences, USA. 107:17421-17426.
Reyers B, Pettorelli N, Katzner T, Gompper ME, Redpath S, Garner TWJ, Altwegg R, Reed DH, Gordon IJ.  2010.  Animal conservation and ecosystem services: garnering the support of mightier forces. Animal Conservation. 13:523-525.
Tavares LR, Fortalezas S, Carrilho C, McDougall GJ, Stewart D, Ferreira RB, Santos CN.  2010.  Antioxidant and antiproliferative properties of strawberry tree tissues. Journal of Berry Research. 1:3-12.
Fortalezas S, Tavares LR, Pimpao RC, Tyagi A, Pontes V, Alves PM, McDougall GJ, Stewart D, Ferreira RB, Santos CN.  2010.  Antioxidant properties and neuroprotective capacity of strawberry tree fruit (Arbutus unedo). Nutrients. 2:214-229.
Hawes C, Squire GR, Hallett PD, Watson CA, Young MW.  2010.  Arable plant communities as indicators of farming practice. Agriculture, Ecosystems and Environment. 138:17-26.
Walker PG, Viola R, Woodhead M, Jorgensen L, Gordon SL, Brennan RM, Hancock RD.  2010.  Ascorbic acid content of blackcurrant fruit is influenced by both genetic and enviromental factors. Functional Plant Science and Biotechnology. 4:40-52.
Navajas EA, Glasbey CA, Fisher AV, Ross DW, Hyslop JJ, Richardson RI, Simm G, Roehe R.  2010.  Assessing beef carcass tissue weights using computed tomography spirals of primal cuts. Meat Science. 84:30-38.
Watkins C, Schock A, May L, Denham S, Sales J, Welch L, Sharp JM, Stevenson K.  2010.  Assessing virulence of vaccine strains of Mycobacterium avium subspecies paratuberculosis in a calf model. Veterinary Microbiology. 146:63-69.
Gomez LD, Whitehead C, Barakate A, Halpin C, McQueen-Mason SJ.  2010.  Automated saccharification assay for determination of digestibility in plant materials. Biotechnology for Biofuels. 3:-23.
Karunakaran R, Haag AF, East AK, Ramachandran VK, Prell J, James EK, Scocchi M, Ferguson GP, Poole PS.  2010.  BacA is essential for bacteroid development in nodules of galegoid, but not phaseoloid, legumes. Journal of Bacteriology. 192:2920-2928.
Eichmann R, Bischof M, Weis C, Shaw J, Lacomme C, Schweizer P, Duchkov D, Hensel G, Kumlehn J, H R.  2010.  BAX INHIBITOR-1 is required for full susceptibility of barley to powdery mildew. Molecular Plant-Microbe Interactions. 23:1217-1227.
Spezia L.  2010.  Bayesian analysis of multivariate Gaussian hidden Markov models with an unknown number of regimes. Journal of Time Series Analysis. 31:1-11.
Bierman S, Butler A, Marion G, K I.  2010.  Bayesian image restoration models for combining expert knowledge on recording activity with species distribution data. Ecography. 33:451-460.
Johnson SN, Hallett PD, Gillespie TL, Halpin C.  2010.  Below-ground herbivory and root toughness: a potential model system using lignin-modified tobacco. Physiological Entomology. 35:186-191. Abstract
Whitson J, McDougall GJ, Ross HA, Lund VA, Hamilton CA, Dominiczak AF, Stewart D.  2010.  Bioactive berry components: Potential modulators of health benefits. Functional Plant Science and Biotechnology. 4:34-38.
Hallett PD, Lichner L, Cerda A.  2010.  Biohydrology: coupling biology and soil hydrology from pores to landscapes preface. Ecohydrology. 3:379-381.
Duthie SJ, Horgan GW, de Roos B, Rucklidge GJ, Reid M, Duncan G, Pirie L, Basten GP, Powers HJ.  2010.  Blood folate status and expression of proteins involved in immune function, inflammation and coagulation: Biochemical and proteomic changes in the plasma of humans in response to long-term synthetic folic acid supplementation. Journal of Proteome Research. 9:1941-1950.
Love CG, Graham NS, O'Lochlainn S, Bowen HC, May ST, White PJ, Broadley MR, Hammond JP, King GJ.  2010.  A Brassica exon array for whole-transcript gene expression profiling. PLoS One. 5:-e12812.
Pacak A, Strozycki PM, Barciszewska-Pacak M, Alejska M, Lacomme C, Jarmolowski A, Szweykowska-Kulinska Z, Figlerowicz M.  2010.  The brome mosaic virus-based recombination vector triggers a limited gene silencing response depending on the orientation of the inserted sequence. Archives of Virology. 155:169-179.
Bontemps C, Elliott GN, Simon MF, Dos Reis J FB, Gross E, Lawton RC, Neto NE, Loureiro MdeF, de Faria SM, Sprent JI et al..  2010.  Burkholderia species are ancient symbionts of legumes. Molecular Ecology. 19:44-52.
Jones HG.  2010.  Can water droplets on leaves cause leaft scorch? New Phytologist. 185:865-867.
Hedley PE, Russell JR, Jorgensen L, Gordon S, Morris JA, Hackett CA, Cardle L, Brennan RM.  2010.  Candidate genes associated with bud dormancy release in blackcurrant (Ribes nigrum L.). BMC Plant Biology. 10:-202.
Sonnenberg R, Bransby MF, Hallett PD, Bengough AG, Mickovski SB, Davies MCR.  2010.  Centrifuge modelling of soil slopes reinforced with vegetation. Canadian Geotechnical Journal. 47:1415-1430.
Newton AC, Akar T, Baresel JP, Bebeli PJ, Bettencourt E, Bladenopoulos KV, Czembor JH, Fasoula DA, Katsiotis A, Koutis K et al..  2010.  Cereal landraces for sustainable agriculture. A review (Review). Agronomy for Sustainable Development. 30:237-269.
Pattemore JA, Rice N, Marshall DF, Waugh R, Henry RJ.  2010.  Cereal variety identification using MALDI-TOF mass spectrometry SNP genotyping. Journal of Cereal Science. 52:356-361.
Dagleish MP, Finlayson J, Bayne C, MacDonald S, Sales J, Hodgson JC.  2010.  Characterisation and time course of pulmonary lesions in calves after intratracheal infection with Pasteurella multocida A:3. Journal of Comparative Pathology. 142:157-169.
Mascia T, Cillo F, Fanelli V, Finetti-Sialer MM, De Stradis A, Palukaitis P, Gallitelli D.  2010.  Characterization of the interactions between Cucumber mosaic virus and Potato virus Y in mixed infections in tomato. Molecular Plant-Microbe Interactions. 23:1514-1524.
Feng X, Simpson AJ, Gregorich EG, Elberling B, Hopkins DW, Sparrow AD, Novis PM, Greenfield LG, Simpson MJ.  2010.  Chemical characterization of microbial-dominated soil organic matter in the Garwood Valley, Antarctica. Geochimica et Cosmochimica Acta. 74:6485-6498.
Elderfield H, Riebesell U, Raven JA, Gattuso JP, Lipps J.  2010.  Closure threat to key museum research facility. Nature. 465:-1005.
Mitchell C, Johnson SN, Gordon SC, Birch ANE, Hubbard SF.  2010.  Combining plant resistance and a natural enemy to control Amphorophora idaei. BioControl. 55:321-327.
Chen XY, Daniell TJ, Neilson R, O'Flaherty V, Griffiths BS.  2010.  A comparison of molecular methods for monitoring soil nematodes and their use as biological indicators. European Journal of Soil Science. 46:319-324.
Denwood MJ, Reid SWJ, Love S, Nielsen MK, Matthews L, McKendrick IJ, Innocent GT.  2010.  Comparison of three alternative methods for analysis of equine faecal egg count reduction test data.. Preventive Veterinary Medicine. 93:316-323.
Smith P, Gregory PJ, van Vuuren D, Obersteiner M, Havlik P, Rounsevell M, Woods J, Stehfest E, Bellarby J.  2010.  Competition for land. Philosophical Transactions of the Royal Society of London B - Biological Sciences. 365:2941-2957.
McGavin WJ, McMenemy LS, MacFarlane SA.  2010.  The complete sequence of a UK strain of Black raspberry necrosis virus. Archives of Virology. 155:1897-1899.
Dupuy L, MacKenzie J, Haseloff J.  2010.  Coordination of plant cell division and expansion in a simple morphogenetic system. Proceedings of the National Academy of Sciences, USA. 107:2711-2716.
Bartlett MD, Briones MJI, Neilson R, Schmidt O, Spurgeon D, Creamer RE.  2010.  A critical review of current methods in earthworm ecology: From individuals to populations (Review). European Journal of Soil Biology. 46:67-73.
Gonz I, Mart I, Rakitina DV, Lewsey MG, Atencio FA, Llave C, Kalinina NO, Carr JP, Palukaitis P, Canto T.  2010.  Cucumber mosaic virus 2b protein subcellular targets and interactions: Their significance to RNA silencing suppressor activity. Molecular Plant-Microbe Interactions. 23:294-303.
Raven JA.  2010.  Cyanotoxins: A poison that frees phosphate. Current Biology. 20:R850-R852.
Garrido E, Bennett AE, Fornoni J, Strauss SY.  2010.  The dark side of the mycorrhiza. Plant Signaling & Behavior. 5:1019-1021.
Bagavathiannan MV, Gulden RH, Begg GS, Van Acker RC.  2010.  The demography of feral alfalfa (Medicago sativa L.) populations occurring in road side habitats in southern Manitoba Canada: Implications for novel trait confinement. Environmental Science and Pollution Research. 17:1448-1459.
Berdeaux O, Gregoire S, Fournier C, Christie WW, Lambelet P, S JL.  2010.  Detection of lactobacillic acid in low erucic rapeseed oil - A note of caution when quantifying cyclic fatty acid monomers in vegetable oils. Chemistry and Physics of Lipids. 163:698-702.
Zhang K, Burns IG, Greenwood DJ, Hammond JP, White PJ.  2010.  Developing a reliable strategy to infer the effective soil hydraulic properties from field evaporation experiments for agro-hydrological models. Agricultural Water Management. 97:399-409.
Martinussen I, Uleberg E, McDougall GJ, Stewart D, Juntilla O.  2010.  Development and quality of cloudberry (Rubus chamaemorus L) as affected by female parent, male parent and temperature. Journal of Berry Research. 1:91-101.
Phillips D, Nibau C, Ramsay L, Waugh R, Jenkins G.  2010.  Development of a molecular cytogenetic recombination assay for barley. Cytogenetic and Genome Research. 129:154-161.
Moloney C, Griffin D, Jones PW, Bryan GJ, McLean K, Bradshaw JE, Milbourne D.  2010.  Development of diagnostic markers for use in breeding potatoes resistance to Globodera pallida pathotype Pa2/3 using germplasm derived from Solanum tuberosum ssp. andigena CPC 2802. Theoretical and Applied Genetics. 120:679-689.
Ievina N, Syed NH, Flavell AJ, Ievinsh G, Rostoks N.  2010.  Development of retrotransposon-based SSAP molecular marker system for study of genetic diversity in sea holly (Eryngium maritimum L.). Plant Genetic Resources - Characterization and Utilization. 8:258-266.
Chen XW, Niks RE, Hedley PE, Morris J, Druka A, Marcel TC, Vels A, Waugh R.  2010.  Differential gene expression in nearly isogenic lines with QTL for partial resistance to Puccinia hordei in barley. BMC Genomics. 11:-629.
Dagleish MP, Hamilton S, Gonz L, Eaton SL, Steele PJ, Finlayson J, Sis S, Pang YP, Sales J, Chianini F et al..  2010.  Digestion and transportation of bovine spongiform encephalopathy-derived prion protein in the sheep intestine. Journal of General Virology. 91:3116-3123.
Ross HA, McDougall GJ, Vincent JFV, Stewart D, Verrall SR, Taylor MA.  2010.  Discerning intra-tuber differences in textural properties in cooked Solanum tuberosum group Tuberosum and group Phureja tubers. Journal of the Science of Food and Agriculture. 90:1527-1532.
Louis P, Young P, Holtrop G, Flint HJ.  2010.  Diversity of human colonic butyrate-producing bacteria revealed by analysis of the butyryl-CoA:acetate CoA-transferase gene. Environmental Microbiology. 12:304-314.
Cosentino D, Hallett PD, Michel JC, Chenu C.  2010.  Do different methods for measuring the hydrophobicity of soil aggregates give the same trends in soil amended with residue? Geoderma. 159:221-227.
Foereid B, Bellarby J, Meier-Augenstein W, Kemp HF.  2010.  Does light exposure make plant litter more degradable? Plant and Soil. 333:275-285.
Zhang B, Deng H, Wang HL, Yin R, Hallett PD, Griffiths BS, Daniell TJ.  2010.  Does microbial habitat or community structure drive the functional stability of microbes to stresses following re-vegetation of a severely degraded soil? Soil Biology and Biochemistry. 42:850-859.
Dupuy L, Vignes M, McKenzie BM, White PJ.  2010.  The dynamics of root meristem distribution in the soil. Plant Cell and Environment. 33:358-369.
Broadley MR, White PJ.  2010.  Eats roots and leaves. Can edible horticultural crops address dietary calcium, magnesium and potassium deficiencies? Proceedings of the Nutrition Society. 69:601-612.
McDougall GJ, Dobson P, Jordan-Mahy N.  2010.  Effect of different cooking regimes on rhubarb polyphenols. Food Chemistry. 119:758-764.
Tighe P, Duthie GG, Vaughan N, Brittenden J, Simpson WG, Duthie S, Mutch W, Wahle K, Horgan GW, Thies F.  2010.  Effect of increased consumption of whole-grain foods on blood pressure and other cardiovascular risk markers in healthy middle-aged persons: a randomised controlled trial. American Journal of Clinical Nutrition. 94:733-740.
Ouellet DR, Berthiaume R, Holtrop G, Lobley GE, Martineau R, Lapierre H.  2010.  Effect of method of conservation of timothy on endogenous nitrogen flows in lactating dairy cows. Journal of Dairy Science. 93:4252-4261.
Vysotskaya LB, Hedley PE, Sharipova G, Veselov D, Kudoyarova G, Morris JA, Jones HG.  2010.  Effect of salinity on water relations of wild barley plants differing in salt tolerance. AoB Plants. :-plq006.
Moragues M, Comadran J, Waugh R, Milne I, Flavell AJ, Russell JR.  2010.  Effects of ascertainment bias and marker number on estimations of barley diversity from high-throughput SNP genotype data. Theoretical and Applied Genetics. 120:1525-1534.
Smith LA, Wells KL, Marion G, Swain DL, Hutchings MR.  2010.  Effects of group composition on the grazing behaviour of herbivores. Animal Behaviour. 80:527-534.
Johnson SN, Gregory PJ, McNicol JW, Oodally Y, Zhang XX, Murray PJ.  2010.  Effects of soil conditions and drought on egg hatching and larval survival of the clover root weevil (Sitona lepidus). Applied Soil Ecology. 44:75-79.
Broadley MR, Hammond JP, White PJ, Salt DE.  2010.  An efficient procedure for normalising ionomics data for Arabidopsis thaliana. New Phytologist. 186:270-274.
Johnson SN, McNicol JW.  2010.  Elevated CO2 and aboveground-belowground herbivory by the clover root weevil. Oecologia. 162:209-216.
Nielson UN, Osler GHR, Campbell CD, Neilson R, Burslem DFRP, van der Wal R.  2010.  The enigma of soil animal species diversity revisited: the role of small-scale heterogeneity. PLoS One. 5:-e11567.
Chen XW, Hackett CA, Niks RE, Hedley PE, Booth C, Druka A, Marcel TC, Vels A, Bayer M, Milne I et al..  2010.  An eQTL analysis of partial resistance to Puccinia hordei in barley. PLoS One. 5:-e8598.
Roberts TJ, McKenna SJ, Du CJ, Wuyts N, Valentine TA, Bengough AG.  2010.  Estimating the motion of plant root cells from in vivo confocal laser scanning microscopy images. Machine Vision and Applications. 21:921-939.
Casa R, Baret F, Buis S, Lopez-Lozano R, Pascucci S, Palombo A, Jones HG.  2010.  Estimation of maize canopy properties from remote sensing by inversion of 1-D and 4-D models. Precision Agriculture. 11:319-334.
Fyfe CL, Stewart J, Murison SD, Jackson DM, Rance K, Speakman JR, Horgan GW, Johnstone AM.  2010.  Evaluating energy intake measurement in free-living subjects: when to record and for how long? Public Health Nutrition. 13:172-180.
Cock PJA, Whitworth DE.  2010.  Evolution of relative reading frame bias in unidirectional prokaryotic gene overlaps. Molecular Biology and Evolution. 27:753-756.
Raven JA, Andrews M.  2010.  Evolution of tree nutrition. Tree Physiology. 30:1050-1071.
Tattersall RJ, Prashar A, Singh KD, Tokarczuk PF, Erichsen JT, Hocking PM, Guggenheim JA.  2010.  Ex vivo magnetic resonance imaging of crystalline lens dimensions in chicken. Molecular Vision. 16:144-153.
Druka A, Franckowiak JD, Lundqvist U, Bonar N, Alexander J, Guzy-Wrobelska J, Ramsay L, Druka I, Grant I, Macaulay M et al..  2010.  Exploiting induced variation to dissect quantitative traits in barley. Biochemical Society Transactions. 38:683-688.
Druka A, Potokina E, Luo ZW, Jiang N, Chen XW, Kearsey MJ, Waugh R.  2010.  Expression quantitative trait loci analysis in plants. Plant Biotechnology Journal. 8:10-27.
Berepiki A, Lichius A, Shoji JY, Tilsner J, Read ND.  2010.  F-actin dynamics in Neurospora crassa. Eukaryotic Cell. 9:547-557.
Milne I, Shaw P, Stephen G, Bayer M, Cardle L, Thomas WTB, Flavell AJ, Marshall DF.  2010.  Flapjack - graphical genotype visualization. Bioinformatics. 26:3133-3134.
Stushnoff C, Ducreux LJM, Hancock RD, Hedley PE, Holm DG, McDougall GJ, McNicol JW, Morris J, Morris WL, Sungurtas J et al..  2010.  Flavonoid profiling and transcriptome analysis reveals new gene-metabolite correlations in tubers of Solanum tuberosum L. Journal of Experimental Botany. 61:1225-1238.
Porter JR, Challinor A, Ewert F, Falloon P, Fischer T, Gregory PJ, Van Ittersum MK, Olesen JE, Moore KJ, Rosenzweig C et al..  2010.  Food security: focus on agriculture. Science. 328:172-173.
Woodhead M, Weir A, Smith K, McCallum S, MacKenzie K, Graham J.  2010.  Functional markers for red raspberry. Journal of the American Society for Horticultural Science. 135:418-427.
Zakri AM, Ziegler A, Torrance L, Fischer R, Commandeur U.  2010.  Generation and characterisation of a scFv against recombinant coat protein of the geminivirus Tomato leaf curl New Delhi virus. Archives of Virology. 155:335-342.
White PJ, Hammond JP, King GJ, Bowen HC, Hayden RM, Meacham MC, Spracklen WP, Broadley MR.  2010.  Genetic analysis of potassium use efficiency in Brassica oleracea. Annals of Botany. 105:1199-1210.
McCallum S, Woodhead M, Hackett CA, Kassim A, Paterson A, Graham J.  2010.  Genetic and environmental effects influencing fruit colour and QTL analysis in raspberry. Theoretical and Applied Genetics. 121:611-627.
Jing RC, Vershinin AV, Grzebyta J, Shaw P, Smykal P, Marshall DF, Ambrose MJ, Ellis THN, Flavell AJ.  2010.  The genetic diversity and evolution of field pea (Pisum) studied by high throughput retrotransposon based insertion polymorphism (RBIP) marker analysis. BMC Evolutionary Biology. 10:-44.
De Maayer P, Chan WY, Venter SN, Toth IK, Birch PRJ, Joubert F, Coutinho TA.  2010.  Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback. Journal of Bacteriology. 192:2936-2937.
Richards S, Gibbs RA, Gerardo NM, Moran N, Nakabachi A, Stern D, Tagu D, Wilson ACC, Muzny D, Kovar C et al..  2010.  Genome sequence of the pea aphid Acyrthosiphon pisum. PLOS Biology. 8:-e1000313.
Cockram J, White J, Zuluaga D, Smith D, Comadran J, Macaulay M, Luo ZW, Kearsey MJ, Werner P, Harrap D et al..  2010.  Genome-wide association mapping of morphological traits to candidate gene resolution in the un-sequenced barley genome. Proceedings of the National Academy of Sciences, USA. 107:21611-21616.
Yang S, Peng Q, Zhang Q, Zou L, Li Y, Robert C, Pritchard L, Liu H, Hovey R, Wang Q et al..  2010.  Genome-wide identifiction of HrpL-regulated genes in the necrotrophic phytopathogen Dickeya dadantii 3937. PLoS One. 5:-e13472.
Bessell PR, Matthews L, Smith-Palmer A, Rotariu O, Strachan NJC, Forbes KJ, Cowden J, Reid SWJ, Innocent GT.  2010.  Geographic determinants of reported human Campylobacter infections in Scotland. BMC Public Health. 10:-423.
Gadd GM, Raven JA.  2010.  Geomicrobiology of eukaryotic microorganisms. Geomicrobiology Journal. 27:491-519.
Raven JA, Thomas H.  2010.  Grasses. Current Biology. 20:R837-R839.
Nowara D, Gay A, Lacomme C, Shaw J, Ridout C, Douchkov D, Hensel G, Kumlehn J, Schweizer P.  2010.  HIGS: Host-induced gene silencing in the obligate biotrophic fungal pathogen Blumeria graminis. Plant Cell. 22:3130-3141.
Meier-Augenstein W, Kemp HF.  2010.  Human provenancing based on stable isotope forensic intellgence. Science & Justice. 50:35-36.
Granger SJ, Bol R, Meier-Augenstein W, Leng MJ, Kemp HF, Heaton THE, White SM.  2010.  The hydrological response of heavy clay grassland soils to rainfall in south-west England using . Rapid Communications in Mass Spectrometry. 24:475-482.
Grenville-Briggs LJ, Avrova AO, Hay RJ, Bruce CR, Whisson SC, van West P.  2010.  Identification of appressorial and mycelial cell wall proteins and a survey of the membrane proteome of Phytophthora infestans. Fungal Biology. 114:702-723.
Grant OM, Tronina L, Ramalho JC, Besson CK, Lobo-Do-Vale R, Pereira JS, Jones HG, Chaves MM.  2010.  The impact of drought on leaf physiology of Quercus suber L. trees: comparison of an extreme drought event with chronic rainfall reduction. Journal of Experimental Botany. 61:4361-4371.
Stroud JL, Li HF, Lopez-Bellido FJ, Broadley MR, Foot I, Fairweather-Tait SJ, Hart DJ, Hurst R, Knott P, Mowat H et al..  2010.  Impact of sulphur fertilisation on crop response to selenium fertilisation. Plant and Soil. 332:31-40.
Shaw RF, Elston DA, Pakeman RJ, Young MR, Iason GR.  2010.  The impacts of pollination mode, plant characteristics and local density on the reproductive success of a scarce plant species, Salix arbuscula. Plant Ecology. 211:367-377.
Bek AS, Sauer J, Thygesen MB, Duus JO, Petersen BO, Thirup S, James EK, Jensen KJ, Stougaard J, Radutoiu S.  2010.  Improved characterisation of nod factors and genetically based variation in LysM receptor domains identify amino acids expendable for nod factor recognition in Lotus spp.. Molecular Plant-Microbe Interactions. 23:58-66.
Raven JA.  2010.  Inorganic carbon acquisition by eukaryotic algae: four current questions. Photosynthesis Research. 106:123-134.
Clark EL, Karley AJ, Hubbard SF.  2010.  Insect endosymbionts: manipulators of insect herbivore trophic interactions? Protoplasma. 244:25-51.
Griffiths BS, Ball BC, Daniell TJ, Hallett PD, Neilson R, Wheatley RE, Osler G, Bohanec M.  2010.  Integrating soil quality changes to arable agricultural systems following organic matter addition, or adoption of a ley-arable rotation. Applied Soil Ecology. 46:43-53.
Helliwell RC, Britton AJ, Gibbs S, Fisher JM, Potts JM.  2010.  Interactive effects of N deposition, land management and weather patterns on soil solution chemistry in a Scottish alpine heath. Ecosystems. 13:696-711.
Makarov VV, Obraztsova EA, Solovyev AG, Morozov SY, Taliansky ME, Yaminsky IV, Kalinina NO.  2010.  The internal domain of hordeivirus movement protein TGB1 forms in vitro filamentous structures.. Biochemistry (Moscow). 75:752-758.
Faisal A, Dondelinger F, Husmeier D, Beale CM.  2010.  Interring species interaction networks from species abundance data: A comparative evaluation of various statistical and machine learning methods. Ecological Informatics. 5:451-464.
Bilton MC, Whitlock R, Grime JP, Marion G, Pakeman RJ.  2010.  Intraspecific trait variation in grassland plant species reveals fine-scale strategy trade-offs and size differentiation that underpins performance in ecological communities. Botany-Botanique. 88:939-952.
Almoosawi S, McDougall GJ, Fyfe L, Al-Dujaili EAS.  2010.  Investigating the inhibitory activity of green coffee and cacao bean extract on pancreatic lipase. Nutrition Bulletin. 35:207-212.
Raczynska KD, Simpson CG, Ciesiolka A, Szewc L, Lewandowska D, McNicol JW, Szweykowska-Kulinska Z, Brown JWS, Jarmolowski A.  2010.  Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana.. Nucleic Acids Research. 38:265-278.
Taliansky ME, Brown JWS, Rajam ML, Valkonen JPT, Kalinina NO.  2010.  Involvement of the plant nucleolus in virus and viroid infections: Parallels with animal pathosystems. Advances in Virus Research. 77:119-158.
Flynn KJ, Raven JA, Rees TAV, Finkel ZV, Quigg A, Beardall J.  2010.  Is the growth rate hypothesis applicable to microalgae? Journal of Phycology. 46:1-12.
Mitchell RJ, Hester AJ, Campbell CD, Chapman SJ, Cameron CM, Hewison RL, Potts JM.  2010.  Is vegetation composition or soil chemistry the best predictor of the soil microbe community? Plant and Soil. 333:417-430.
Thorsen MK, Woodward S, McKenzie BM.  2010.  Kelp (Laminaria digitata) increases germination and affects rooting and plant vigour in crops and native plants from an arable grassland in the Outer Hebrides, Scotland. Journal of Coastal Conservation. 14:239-247.
Magurran AE, Baillie SR, Buckland ST, Dick JM, Elston DA, Scott EM, Smith RI, Somerfield PJ, Watt AD.  2010.  Long-term datasets in biodiversity research and monitoring: assessing change in ecological communities through time. Trends in Ecology and Evolution. 25:574-582.
Deng H, Zhang B, Yin R, Wang HL, Mitchell SM, Griffiths BS, Daniell TJ.  2010.  Long-term effect of re-vegetation on the microbial community of a severely eroded soil in sub-tropical China. Plant and Soil. 328:447-458.
Newton AC, Gravouil C, Fountaine JM.  2010.  Managing the ecology of foliar pathogens: ecological tolerance in crops (Review). Annals of Applied Biology. 157:343-359.
Blum M, Boehler M, Randall E, Young V, Csukai M, Kraus S, Moulin F, Scalliet G, Avrova AO, Whisson SC et al..  2010.  Mandipropamid targets the cellulose synthase-like PiCesA3 to inhibit cell wall biosynthesis in the oomycete plant pathogen, Phytophthora infestans. Molecular Plant Pathology. 11:227-243.
Rhind SM, Kyle CE, Mackie C, McDonald L, Zhang Z, Duff EI, Bellingham M, Amezaga MR, Mandon-Pepin B, Loup B et al..  2010.  Maternal and fetal tissue accumulation of selected endocrine disrupting compounds (EDC) following exposure to sewage sludge-treated pastures before or after conception. Journal of Environmental Monitoring. 12:1582-1593.
Dixon ER, Blackwell MSA, Dhanoa MS, Berryman Z, de la Fuente Martinez N, Junquera D, Martinez A, Murray PJ, Kemp HF, Meier-Augenstein W et al..  2010.  Measurement at the field scale of soil . Rapid Communications in Mass Spectrometry. 24:511-518.
Campbell R, Ducreux LJM, Morris WL, Morris JA, Suttle JC, Ramsay G, Bryan GJ, Hedley PE, Taylor MA.  2010.  The metabolic and developmental roles of cartotenoid cleavage dioxygenase 4 from potato. Plant Physiology. 154:656-664.
Davies HV, Shepherd LVT, Stewart D, Frank T, R R, Engel K-H.  2010.  Metabolome variability in crop plant species - when, where, how much and so what? Regulatory Toxicology and Pharmacology. 58:S54-S61.
Shepherd LVT, Alexander CA, Sungurtas J, McNicol JW, Stewart D, Davies HV.  2010.  Metabolomic analysis of the potato tuber life cycle. Metabolomics. 6:274-291.
Renberg L, Johansson AI, Shutova T, Stenlund H, Aksmann A, Raven JA, Gardestrom P, Moritz T, Samuelsson G.  2010.  A metabolomic approach to study major metabolite changes during acclimation to limiting CO2 in Chlamydomonas reinhardtii. Plant Physiology. 154:187-196.
Dobson G, Shepherd T, Verrall SR, Griffiths DW, Ramsay G, McNicol JW, Davies HV, Stewart D.  2010.  A metabolomics study of cultivated potato (Solanum tuberosum) groups, Andigena, Phureja, Stenotomum and Tuberosum using gas chromatography-mass spectrometry. Journal of Agricultural and Food Chemistry. 58:1214-1223.
Sanchez SE, Petrillo E, Beckwith EJ, Zhang X, Rugnone ML, Hernando CE, Cuevas JC, Godoy Herz MA, Depetris-Chauvin A, Simpson CG et al..  2010.  A methyl transferase links the circadian clock to the regulation of alternative splicing. Nature. 468:112-116.
Fenton B, Margaritopoulos JT, Malloch GL, Foster SP.  2010.  Micro-evolutionary change in relation to insecticide resistance in the peach-potato aphid, Myzus persicae. Ecological Entomology. 35:131-146.
Castillo NRF, Reed BM, Graham J, Fern F, Bassil NV.  2010.  Microsatellite markers for raspberry and blackberry. Journal of the American Society for Horticultural Science. 135:271-278.
Elia M, Swanston JS, Moralejo MA, Casas AM, P AM, Ciudad FJ, Thomas WTB, Smith PL, Ullrich SE, Molina-Cano J-L.  2010.  A model of the genetic differences in malting quality between European and North American barley cultivars based on a QTL study of the cross Triumph x Morex. Plant Breeding. 129:280-290.
Preedy K, Schofield PG, Liu S, Matzavinos A, Chaplain MAJ, Hubbard SF.  2010.  Modelling contact spread of infection in host-parasitoid systems: Vertical transmission of pathogens can cause chaos. Journal of Theoretical Biology. 262:441-451.
Grzegorczyk M, Husmeier D, Rahnenf J.  2010.  Modelling nonstationary gene regulatory processes. Advances in Bioinformatics. :-749848.
Stott AW, Humphry RW, Gunn GJ.  2010.  Modelling the effects of previous infection and re-infection on the costs of bovine viral diarrhoea outbreaks in beef herds. Veterinary Journal. 185:138-143.
Madsen LH, Tirichine L, Jurkiewicz A, Sullivan JT, Heckmann AB, Bek AS, Ronson CW, James EK, Stougaard J.  2010.  The molecular network governing nodule organogenesis and infection in the model legume Lotus japonicus. Nature Communications. 1:-10.
Clayton SJ, Clegg CD, Bristow AW, Gregory PJ, Headon DM, Murray PJ.  2010.  Movement of newly assimilated 13C carbon in the grass Lolium perenne and its incorporation into rhizosphere microbial DNA. Rapid Communications in Mass Spectrometry. 24:535-540.
Hackett CA, Russell JR, Jorgensen L, Gordon SL, Brennan RM.  2010.  Multi-environment QTL mapping in blackcurrant (Ribes nigrum L.) using mixed models. Theoretical and Applied Genetics. 121:1483-1488.
Oono R, Schmitt I, Sprent JI, Denison RF.  2010.  Multiple evolutionary origins of legume traits leading to extreme rhizobial differentiation. New Phytologist. 187:508-520.
Wright KM, Cowan GH, Lukhovitskaya NI, Tilsner J, Roberts AG, Savenkov EI, Torrance L.  2010.  The N-terminal domain of PMTV TGB1 movement protein is required for nucleolar localization, microtubule association and long-distance movement. Molecular Plant-Microbe Interactions. 23:1486-1497.
Jamar C, Loffet F, Frettinger P, Ramsay L, Fauconnier ML, du Jardin P.  2010.  NAM-1gene polymorphism and grain protein content in Hordeum. Journal of Plant Physiology. 167:497-501.
Munns R, James RA, Sirault XRR, Furbank RT, Jones HG.  2010.  New phenotyping methods for screening wheat and barley for beneficial responses to water deficit. Journal of Experimental Botany. 61:3499-3507.
Dos Reis J FB, Simon MF, Gross E, Boddey RM, Elliott GN, Neto NE, Loureiro MdeF, de Queiroz LP, Scotti MR, Chen W-M et al..  2010.  Nodulation and nitrogen fixation by Mimosa spp. in the Cerrado and Caatinga biomes of Brazil. New Phytologist. 186:934-946.
Raven JA, Knoll AH.  2010.  Non-skeletal biomineralisation by eukaryotes: Matters of moment and gravity. Geomicrobiology Journal. 27:572-584.
Wheelhouse N, Katzer F, Wright F, Longbottom D.  2010.  Novel chlamydia-like organisms as cause of bovine abortions, UK. Emerging Infectious Diseases. 16:1323-1324.
Newton AC, Fitt BDL, Atkins SD, Walters DR, Daniell TJ.  2010.  Pathogenesis, parasitism and mutualism in the trophic space of microbe-plant interactions. Trends in Microbiology. 18:365-373.
Mostowfizadeh-Ghalamfarsa R, Panabi F, Banihashemi Z, Cooke DEL.  2010.  Phylogenetic relationship of Phytophthora cryptogea Pethybr. & Laff and P. drechsleri Tucker. Fungal Biology. 114:325-339.
Duarte IM, De Almeida MTM, Brown DJF, Marques I, Neilson R, Decraemer W.  2010.  Phylogenetic relationships, based on SSU rDNA sequences, among the didelphic genera of the family Trichodoridae from Portugal. Nematology. 12:171-180.
Fleury D, Luo MC, Dvorak J, Ramsay L, Gill BS, Anderson OD, You FM, Schoaei Z, Deal KR, Langridge P.  2010.  Physical mapping of a large plant genome using global high-information-content-fingerprinting: the distal region of the wheat ancestor Aegilops tauschii chromosome 3DS. BMC Genomics. 11:-382.
Berry P, Spink J, Foulkes J, White PJ.  2010.  The physiological basis of genotypic differences in nitrogen use efficiency in oilseed rape (Brassica napus L.). Field Crops Research. 119:365-373.
Chichkova NV, Shaw J, Galiullina RA, Drury GE, Tuzhikov AI, Kim S-H, Kalkum M, Hong TB, Gorshkova EN, Torrance L et al..  2010.  Phytaspase, a relocalisable cell death promoting plant protease with caspase specificity. EMBO Journal. 29:1149-1161.
Bos JIB, Armstrong MR, Gilroy EM, Boevink P, Hein I, Taylor RM, Tian ZD, Engelhardt S, Vetukuri RR, Harrower BE et al..  2010.  Phytophthora infestans effector AVR3a is essential for virulence and manipulates plant immunity by stabilizing host E3 ligase CMPG1. Proceedings of the National Academy of Sciences, USA. 107:9909-9914.
Finkel ZV, Beardall J, Flynn KJ, Quigg A, Rees TAV, Raven JA.  2010.  Phytoplankton in a changing world: Cell size and elemental stoichiometry. Journal of Plankton Research. 32:119-137.
Bengough AG, Hans J, Bransby MF, Valentine TA.  2010.  PIV as a method for quantifying root cell growth and particle displacement in confocal images. Microscopy Research and Technique. 73:27-36. Abstract
Rietman H, Champouret N, Hein I, Niks RE, Vleeshouwers VGAA.  2010.  Plant and oomycetes, an intimate relationship: co-evolutionary principles and impact on agricultural practice. CAB Review. 58:1-17.
Lambers H, Brundett MC, Raven JA, Hopper SD.  2010.  Plant mineral nutrition in ancient landscapes: high plant species diversity on infertile soils is linked to functional diversity for nutritional strategies. Plant and Soil. 334:11-31.
White PJ, Brown PH.  2010.  Plant nutrition for sustainable development and global health. Annals of Botany. 105:1073-1080.
Hinojosa MB, Carreira JA, Garc R, Rodr JM, Daniell TJ, Griffiths BS.  2010.  Plant treatment, pollutant load and soil type effects in the rhizosphere ecology of trace element polluted soils. Ecotoxicology and Environmental Safety. 73:970-981. Abstract
Kim S-H, Spensley M, Choi SK, Calixto CPG, Pendle AF, Koroleva O, Shaw PJ, Brown JWS.  2010.  Plant U13 orthologues and orphan snoRNAs identified by RNomics of RNA from Arabidopsis nucleoli. Nucleic Acids Research. 38:3054-3067.
Lankau RA, Wheeler E, Bennett AE, Strauss SY.  2010.  Plant-soil feedbacks contribute to an intransitive competitive network that promotes both genetic and species diversity. Journal of Ecology. 99:176-185.
Loades KW, Bengough AG, Bransby MF, Hallett PD.  2010.  Planting density influence on fibrous root reinforcement of soils. Ecological Engineering. 36:276-284. Abstract
Holden N.  2010.  Plants as reservoirs for human enteric pathogens (Review). CAB Reviews: Perspectives in Agriculture, Veterinary Science, Nutrition and Natural Resources. 5, 047:1-11.
Tilsner J, Cowan GH, Roberts AG, Chapman SN, Ziegler A, Savenkov EI, Torrance L.  2010.  Plasmodesmal targeting and intercellular movement of Potato mop-top pomovirus is mediated by a membrane anchored tyrosine-based motif on the lumenal side of the endoplasmic reticulum and the C-terminal transmembrane domain in the TGB3 movement protein. Virology. 402:41-51.
Andrews M, Hodge S, Raven JA.  2010.  Positive plant microbial interactions. Annals of Applied Biology. 157:317-320.
Brulisauer F, Lewis FI, Ganser AG, McKendrick IJ, Gunn GJ.  2010.  The prevalence of bovine viral diarrhoea virus infection in beef suckler herds in Scotland. Veterinary Journal. 186:226-231.
Hotchkiss EJ, Dagleish MP, Willoughby K, McKendirck IJ, Finlayson J, Zadoks RN, Newsome E, Brulisauer F, Gunn GJ, Hodgson JC.  2010.  Prevalence of Pasteurella multocida and other respiratory pathogens in the nasal tract of Scottish calves. Veterinary Record. 167:555-560.
Gill CIR, McDougall GJ, Glidewell SM, Stewart D, Shen Q, Tuohy K, Dobbin A, Boyd A, Brown E, Haldar S et al..  2010.  Profiling of phenols in human faecal water after raspberry supplementation. Journal of Agricultural and Food Chemistry. 58:10389-10395.
Johnson SN, Petitjean S, Clark KE, Mitchell C.  2010.  Protected raspberry production accelerates onset of oviposition by vine weevils (Otiorhynchus sulcatus). Agricultural and Forest Entomology. 12:277-283.
Rotariu O, Smith-Palmer A, Cowden J, Bessell PR, Innocent GT, Reid SWJ, Matthews L, Dallas J, Ogden ID, Forbes KJ et al..  2010.  Putative household outbreaks of campylobacteriosis typically comprise single MLST genotypes. Epidemiology and Infection. 138:1744-1747.
Vollsnes A, Futsaether CM, Bengough AG.  2010.  Quantifying rhizosphere particle movement around mutant maize roots using time-lapse imaging and particle image velocimetry. European Journal of Soil Science. 61:926-939.
Robinson G, Wright S, Elwin K, Hadfield SJ, Katzer F, Bartley PM, Hunter PR, Nath M, Innes EA, Chalmers RM.  2010.  Re-description of Cryptosporidium cuniculus Inman and Takeuchi 1979 (Apicomplexa:Cryptosporidiidae): morphology, biology and phylogeny. International Journal for Parasitology. 40:1539-1548.
Oliva R, Win J, Raffaele S, Boutemy L, Bozkurt TO, Chaparro-Garcia A, Segretin ME, Stam R, Schornack S, Cano LM et al..  2010.  Recent developments in effector biology of filamentous plant pathogens. Cellular Microbiology. 12:705-715.
Beale CM, Lennon JJ, Yearsley JM, Brewer MJ, Elston DA.  2010.  Regression analysis of spatial data. Ecology Letters. 13:246-264.
Simpson CG, Manthri S, Raczynska KD, Kalyna M, Lewandowska D, Kusenda B, Maronova M, Szweykowska-Kulinska Z, Jarmolowski A, Barta A et al..  2010.  Regulation of plant gene expression by alternative splicing. Biochemical Society Transactions. 38:667-671.
Meeuwsen S, Horgan GW, Elia M.  2010.  The relationship between BMI and percent body fat, measured by bioelectrical impedance, in a large adult sample is curvilinear and influenced by age and sex. Clinical Nutrition. 29:560-566.
Morris WL, Shepherd T, Verrall SR, McNicol JW, Taylor MA.  2010.  Relationships between volatile and non-volatile metabolites and attributes of processed potato flavour. Phytochemistry. 71:1765-1773.
Lees AK, Brierley JL, Stewart JA, Hilton AJ, Wale SJ, Gladders P, Bradshaw NJ, Peters JC.  2010.  Relative importance of seed-tuber and soilborne inoculum in causing black dot disease of potato. Plant Pathology. 59:693-702.
Wattegedera S, Watson DM, Hope JC, Kaiser P, Sales J, McInnes CJ, Entrican G.  2010.  Relative quantitative kinetics of interferon-gamma and interleukin-10 mRNA and protein production by activated ovine peripheral blood mononuclear cells. Veterinary Immunology and Immunopathology. 136:34-42.
Vittoz P, Bayfield N, Brooker R, Elston DA, Duff EI, Theurillat JP, Guisan A.  2010.  Reproducibility of species lists, visual cover estimates and frequency methods for recording high-mountain vegetation. Journal of Vegetation Science. 21:1035-1047.
Fenton B, Kasprowicz L, Malloch G, Pickup J.  2010.  Reproductive performance of asexual clones of the peach-potato aphid (Myzus persicae, Homoptera: Aphididae) colonising Scotland in relation to host plant and field ecology. Bulletin of Entomological Research. 100:451-460.
Thorsen MK, Hopkins DW, Woodward S, McKenzie BM.  2010.  Resilience of microorganisms and aggregation of a sandy calcareous soil to amendment with organic and synthetic fertilizer. Soil Use and Management. 26:149-157.
Mickovski SB, Bransby MF, Bengough AG, Davies MCR, Hallett PD.  2010.  Resistance of simple plant root systems to uplift loads. Canadian Geotechnical Journal. 47:78-95. Abstract
Hartley IP, Hopkins DW, Sommerkorn M, Wookey PA.  2010.  The response of organic matter mineralisation to nutrient and substrate additions in subarctic soils. Soil Biology & Biochemistry. 42:92-100.
Paroli R, Spezia L.  2010.  Reversible jump markov chain Monte Carlo methods and segmentation algorithms in hidden Markov models. Australian & New Zealand Journal of Statistics. 52:151-166.
Davies HV.  2010.  The role of 'omics' technologies in food safety assessment. Food Control. 21:1601-1610.
Dupuy L, Gregory PJ, Bengough AG.  2010.  Root growth models: Towards a new generation of continuous approaches. Journal of Experimental Botany. 61:2131-2143.
Kylli P, Nohynek L, Puupponen-Pimia R, Westerlund-Wikstrom B, McDougall GJ, Stewart D, Heinonen M.  2010.  Rowanberry phenolics: compositional analysis and bioactivites. Journal of Agricultural and Food Chemistry. 58:11985-11992.
K A, Kuiper HA, Marvin HJP, Boon PE, Busk L, Cnudde FC, Cope S, Davies HV, Dreyer M, Frewer LJ et al..  2010.  The SAFE FOODS framework for improved risk analysis of foods. Food Control. 21:1566-1587.
Kuiper HA, Davies HV.  2010.  The SAFE FOODS risk analysis framework suitable for GMOs? A case study. Food Control. 21:1662-1676.
Cock PJA, Fields CJ, Goto N, Heuer ML, Rice PM.  2010.  The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants. Nucleic Acids Research. 38:1767-1771.
Montero-Serrano JC, Palarea-Albaladejo J, Martin-Fern JA, Mart M, Guti JV.  2010.  Sedimentary chemofacies characterization by means of multivariate analysis. Sedimentary Geology. 228:218-228.
Broadley MR, Alcock J, Alford J, Cartwright P, Foot I, Fairweather-Tait SJ, Hart DJ, Hurst R, Knott P, McGrath SP et al..  2010.  Selenium biofortification of high-yielding winter wheat (Triticum aestivum L.) by liquid or granular Se fertilisation. Plant and Soil. 332:5-18.
McGavin WJ, MacFarlane SA.  2010.  Sequence similarities between Raspberry leaf mottle virus, Raspberry leaf spot virus and the closterovirus Raspberry mottle virus. Annals of Applied Biology. 156:439-448.
Broadley MR, O'Lochlainn S, Hammond JP, Bowen HC, Cakmak I, Eker S, Erdem H, King GJ, White PJ.  2010.  Shoot zinc (Zn) concentration varies widely within Brassica oleracea L. and is affected by soil Zn and phosphorus (P) levels. Journal of Horticultural Science & Biotechnology. 85:375-380.
Carr JP, Lewsey MG, Palukaitis P.  2010.  Signaling in induced resistance. Advances in Virus Research. 76:57-121.
Praveen S, Ramesh SV, Mishra AK, Koundal V, Palukaitis P.  2010.  Silencing potential of viral-derived RNAi constructs in Tomato leaf curl virus-AC4 gene suppression in tomato. Transgenic Research. 19:45-55.
Bingham IJ, Bengough AG, Rees RM.  2010.  Soil compaction - N interactions in barley: Root growth and tissue composition. Soil and Tillage Research. 106:241-246.
Stroud JL, Broadley MR, Foot I, Fairweather-Tait SJ, Hart DJ, Hurst R, Knott P, Mowat H, Norman K, Scott P et al..  2010.  Soil factors affecting selenium concentration in wheat grain and the fate and speciation of Se fertilisers applied to soil. Plant and Soil. 332:19-30.
Pickles BJ, Genney DR, Potts JM, Lennon JJ, Anderson IC, Alexander IJ.  2010.  Spatial and temporal ecology of Scots pine ectomycorrhizas. New Phytologist. 186:755-768.
Rustenholz C, Hedley PE, Morris J, Choulet F, Feuillet C, Waugh R, Paux E.  2010.  Specific patterns of gene space organisation revealed in wheat by using the combination of barley and wheat genomic resources. BMC Genomics. 11:-714.
Hornyik C, Terzi LC, Simpson GG.  2010.  The Spen family protein FPA controls alternative cleavage and polyadenylation of RNA. Developmental Cell. 18:203-213.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.