Publications list
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African legumes: A vital but under-utilised resource. Journal of Experimental Botany. 61:1257-1265.
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2010.
Ambiguous genetic relationships among coconut (Cocos nucifera L.) cultivars: the effects of outcrossing, sample source and size, and method of analysis. Genetic Resources and Crop Evolution. 57:203-217.
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2010.
Analysis of anthocyanin composition and content contained from grains of the Korean purple rice varieties by liquid chromatography with diode array detection and electrospray ionization/mass spectrometry (LC-DAD-ESI/MS). Korean Journal of International Agriculture. 22:267-272.
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2010.
Analysis of meiosis and cell cycle genes of the facultatively asexual pea aphid, Acyrthosiphon pisum (Hemiptera: Aphididae). Insect Molecular Biology. 19 Supplement s2:229-239.
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2010.
Animal conservation and ecosystem services: garnering the support of mightier forces. Animal Conservation. 13:523-525.
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2010.
Antioxidant and antiproliferative properties of strawberry tree tissues. Journal of Berry Research. 1:3-12.
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2010.
Antioxidant properties and neuroprotective capacity of strawberry tree fruit (Arbutus unedo). Nutrients. 2:214-229.
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2010.
Cereal variety identification using MALDI-TOF mass spectrometry SNP genotyping. Journal of Cereal Science. 52:356-361.
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2010.
Characterization of the interactions between Cucumber mosaic virus and Potato virus Y in mixed infections in tomato. Molecular Plant-Microbe Interactions. 23:1514-1524.
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2010.
Chemical characterization of microbial-dominated soil organic matter in the Garwood Valley, Antarctica. Geochimica et Cosmochimica Acta. 74:6485-6498.
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2010.
Closure threat to key museum research facility. Nature. 465:-1005.
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2010.
The dark side of the mycorrhiza. Plant Signaling & Behavior. 5:1019-1021.
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2010.
The demography of feral alfalfa (Medicago sativa L.) populations occurring in road side habitats in southern Manitoba Canada: Implications for novel trait confinement. Environmental Science and Pollution Research. 17:1448-1459.
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2010.
Development and quality of cloudberry (Rubus chamaemorus L) as affected by female parent, male parent and temperature. Journal of Berry Research. 1:91-101.
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2010.
Does microbial habitat or community structure drive the functional stability of microbes to stresses following re-vegetation of a severely degraded soil? Soil Biology and Biochemistry. 42:850-859.
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2010.
Effect of salinity on water relations of wild barley plants differing in salt tolerance. AoB Plants. :-plq006.
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2010.
An efficient procedure for normalising ionomics data for Arabidopsis thaliana. New Phytologist. 186:270-274.
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2010.
Exploiting induced variation to dissect quantitative traits in barley. Biochemical Society Transactions. 38:683-688.
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2010.
Expression quantitative trait loci analysis in plants. Plant Biotechnology Journal. 8:10-27.
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2010.
Flavonoid profiling and transcriptome analysis reveals new gene-metabolite correlations in tubers of Solanum tuberosum L. Journal of Experimental Botany. 61:1225-1238.
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2010.
Generation and characterisation of a scFv against recombinant coat protein of the geminivirus Tomato leaf curl New Delhi virus. Archives of Virology. 155:335-342.
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2010.
Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback. Journal of Bacteriology. 192:2936-2937.
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2010.
Genome sequence of the pea aphid Acyrthosiphon pisum. PLOS Biology. 8:-e1000313.
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2010.
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2010.
The internal domain of hordeivirus movement protein TGB1 forms in vitro filamentous structures.. Biochemistry (Moscow). 75:752-758.
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2010.
Involvement of the plant nucleolus in virus and viroid infections: Parallels with animal pathosystems. Advances in Virus Research. 77:119-158.
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2010.
Is the growth rate hypothesis applicable to microalgae? Journal of Phycology. 46:1-12.
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2010.
Long-term effect of re-vegetation on the microbial community of a severely eroded soil in sub-tropical China. Plant and Soil. 328:447-458.
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2010.
The metabolic and developmental roles of cartotenoid cleavage dioxygenase 4 from potato. Plant Physiology. 154:656-664.
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2010.
Microsatellite markers for raspberry and blackberry. Journal of the American Society for Horticultural Science. 135:271-278.
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2010.
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2010.
Modelling contact spread of infection in host-parasitoid systems: Vertical transmission of pathogens can cause chaos. Journal of Theoretical Biology. 262:441-451.
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2010.
Multiple evolutionary origins of legume traits leading to extreme rhizobial differentiation. New Phytologist. 187:508-520.
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2010.
Nodulation and nitrogen fixation by Mimosa spp. in the Cerrado and Caatinga biomes of Brazil. New Phytologist. 186:934-946.
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2010.
Phylogenetic relationship of Phytophthora cryptogea Pethybr. & Laff and P. drechsleri Tucker. Fungal Biology. 114:325-339.
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2010.
Phytaspase, a relocalisable cell death promoting plant protease with caspase specificity. EMBO Journal. 29:1149-1161.
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2010.
Phytoplankton in a changing world: Cell size and elemental stoichiometry. Journal of Plankton Research. 32:119-137.
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2010.
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2010.
Plant nutrition for sustainable development and global health. Annals of Botany. 105:1073-1080.
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2010.
Plant treatment, pollutant load and soil type effects in the rhizosphere ecology of trace element polluted soils. Ecotoxicology and Environmental Safety. 73:970-981. Abstract
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2010.
Plant U13 orthologues and orphan snoRNAs identified by RNomics of RNA from Arabidopsis nucleoli. Nucleic Acids Research. 38:3054-3067.
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2010.
Plant-soil feedbacks contribute to an intransitive competitive network that promotes both genetic and species diversity. Journal of Ecology. 99:176-185.
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2010.
Quantifying rhizosphere particle movement around mutant maize roots using time-lapse imaging and particle image velocimetry. European Journal of Soil Science. 61:926-939.
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2010.
Resistance of simple plant root systems to uplift loads. Canadian Geotechnical Journal. 47:78-95. Abstract
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2010.
The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants. Nucleic Acids Research. 38:1767-1771.
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2010.
Signaling in induced resistance. Advances in Virus Research. 76:57-121.
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2010.
Silencing potential of viral-derived RNAi constructs in Tomato leaf curl virus-AC4 gene suppression in tomato. Transgenic Research. 19:45-55.
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2010.
Stomatal vs. genome size in angiosperms: The somatic tail wagging the genomic dog? Annals of Botany. 105:573-584.
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2010.
The twin arginine protein transport pathway exports multiple virulence proteins in the plant pathogen Streptomyces scabies. Molecular Microbiology. 77:252-271.
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2010.
Varied movement strategies employed by triple gene block encoding viruses (Review). Molecular Plant-Microbe Interactions. 23:1231-1247.
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2010.
What contribution do detergent fatty alcohols make to sewage discharges and the marine environment? Journal of Environmental Monitoring. 12:1846-1856.
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2010.
White and green tea polyphenols inhibit pancreatic lipase in vitro. Food Research International. 43:1537-1544.
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2010.
Whole-genome association mapping in elite inbred crop varieties. Genome. 53:967-972.
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2010.
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2010.
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2009.
Allometry and stoichiometry of unicellular, colonial and multicellular phytoplankton. New Phytologist. 181:295-309.
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2009.
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2009.
Biochemical properties and biodegradation of dissolved organic matter from soils. Biology and Fertility of Soils. 45:733-742. Abstract
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2009.
Biological nitrification inhibition (BNI) - Is there potential for genetic interventions in Triticeae? Breeding Science. 59:529-545.
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2009.
Biopython: freely available Python tools for computational molecular biology and bioinformatics. Bioinformatics. 25:1422-1423.
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2009.
The C-terminus of the Polerovirus P5 readthrough domain limits virus infection to the phloem. Journal of Virology. 83:5419-5429. Abstract
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2009.
Characterisation of a novel air-liquid interface biofilm of Pseudomonas fluorescens SBW25. Microbiology. 155:1397-1406.
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2009.
Comparative transcriptomics in the Triticeae. BMC Genomics. 10:-285. Abstract
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2009.
Darwin - a mission to detect and search for life on extrasolar planets. Astrobiology. 9:1-22.
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2009.
Desirable plant root traits for protecting natural and engineered slopes against landslides (Invited review). Plant and Soil. 324:1-30.
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2009.
Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics. 10:-582.
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2009.
Development and mapping of DArT markers within the Festuca - Lolium complex. BMC Genomics. 10:-473.
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2009.
Does biotechnology have a role in the promotion of underutilised crops? Food Policy. 34:319-328.
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2009.
Domain organization of the N-terminal portion of hordeivirus movement protein TGBp1. Journal of General Virology. 90:3022-3032.
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2009.
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2009.
Ecosystem feedbacks and cascade processes: understanding their role in the responses of Arctic and alpine ecosystems to environmental change. Global Change Biology. 15:1153-1172. Abstract
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2009.
Ectopic 5' splice sites inhibit gene expression by engaging RNA surveillance and silencing pathways in plants. Plant Physiology. 151:955-965.
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2009.
The emergence of whole genome association scans in barley. Current Opinion in Plant Biology. 12:218-222.
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2009.
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2009.
Estimating the annual number of breeding attempts from breeding dates using mixture models. Ecology Letters. 12:1184-1193.
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2009.
Evidence and evolutionary analysis of ancient whole-genome duplication in barley predating the divergence from rice. BMC Evolutionary Biology. 9:-209.
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2009.
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2009.
Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature. 461:393-398.
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2009.
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2009.
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2009.
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2009.
Inter- and intra-specific exposure to parasites and pathogens via the faecal-oral route: a consequence of behaviour in a patchy environment. Epidemiology and Infection. 137:630-643.
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2009.
International Barley Sequencing Consortium - at the threshold of efficient access to the barley genome. Plant Physiology. 149:142-147. Abstract
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2009.
Isotopic evidence for the provenance and turnover of organic carbon by soil microorganisms in the Antarctic dry valleys. Environmental Microbiology. 11:597-608. Abstract
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2009.
Live biospeckle laser imaging of root tissues. European Biophysics Journal. 38:679-686. Abstract
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2009.
Nitrogen use efficiency. 3. Nitrogen fixation: genes and costs. Annals of Applied Biology. 155:1-13.
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2009.
Nodulation of Sesbania species by Rhizobium (Agrobacterium) strain IRBG74 and other Rhizobia. Environmental Microbiology. 11:2510-2525.
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2009.
Phagotrophy in the origins of photosynthesis in eukaryotes and as a complementary mode of nutrition in phototrophs: relation to Darwin's insectivorous plants. Journal of Experimental Botany. 60:3975-3987.
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2009.
Plant mechanisms to optimise access to soil phosphorus. Crop and Pasture Science. 60:124-143.
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2009.
Quantitative evolution of aggressiveness of powdery mildew under two-cultivar barley mixtures. Plant Pathology. 58:378-388. Abstract
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2009.
Reconstruction of monocotyledonous proto-chromosomes reveals faster evolution in plants than in animals. Proceedings of the National Academy of Sciences, USA. 106:14908-14913.
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2009.
Rice responses to soil management in rice-based cropping system in the semi-arid tropics of southern Lombok, Eastern Indonesia. Field Crops Research. 110:197-206. Abstract
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2009.
Robust detection and genotyping of single feature polymorphisms from gene expression data. PLoS Computational Biology. 5:-e1000317.
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2009.
The role of the Cucumber mosaic virus 2b protein in viral movement and symptom induction. Molecular Plant-Microbe Interactions. 22:642-654. Abstract
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2009.
Root phenomics of crops - opportunities and challenges. Functional Plant Biology. 36:922-929.
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2009.
Salicylic acid confers resistance to a biotrophic rust pathogen, Puccinia substriata, in pearl millet (Pennisetum glaucum). Molecular Plant Pathology. 10:291-304.
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2009.
Sequencing the potato genome: Outline and first results to come from the elucidation of the sequence of the world's most important food crop. American Journal of Potato Research. 86:417-429.
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2009.
Stability and competitiveness of interviral recombinant RNAs derived from a chimeric cucumovirus. Virus Research. 140:216-221. Abstract
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2009.
Thermal infrared imaging of crop canopies for the remote diagnosis and quantification of plant responses to water stress in the field.. Functional Plant Biology. 36:978-989.
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2009.
Three-dimensional modelling of chick embryo eye development and growth using high resolution magnetic resonance imaging. Experimental Eye Research. 89:511-521.
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2009.
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2009.
Viruses in soils: morphological diversity and abundance in the rhizosphere. Annals of Applied Biology. 155:51-60. Abstract
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2009.
δ13C and δ15N values in reef corals Porites lutea and P. cylindrica and in their epilithic and endolithic algae. Marine Biology. 155:353-361. Abstract
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2008.
Agent-based modelling of foraging behaviour: the impact of spatial heterogeneity on disease risks from faeces in grazing systems. Journal of Agricultural Science. 146:507-520. Abstract
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2008.
Aorta protein networks in marginal and acute zinc deficiency. Proteomics. 8:2126-2135. Abstract
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2008.
Atomic force microscopy of potato virus A.. Colloid Journal. 70:199-201. Abstract
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2008.
Barley adaptation and improvement in the Mediterranean basin. Plant Breeding. 127:554-560.
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2008.
Bursaphelenchus xylophilus: opportunities in comparative genomics and molecular host-parasite interactions (Review). Molecular Plant Pathology. 9:357-368. Abstract
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2008.
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2008.
Cereal breeding takes a walk on the wild side. Trends in Genetics. 24:24-32. Abstract
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2008.
Changes in growth, internode distance and nutrient concentrations of the seagrass Halophila ovalis with exposure to sediment sulphide. Marine Ecology-Progress Series. 361:83-91. Abstract
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2008.
Characterisation of the cellulose binding protein Mj-cbp-1 of the root knot nematode, Meloidogyne javanica. Physiological and Molecular Plant Pathology. 72:21-28. Abstract
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2008.
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2008.
The cucumovirus 2b gene drives selection of inter-viral recombinants affecting the crossover site, the acceptor RNA and the rate of selection. Nucleic Acids Research. 36:1057-1071. Abstract
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2008.
Cylindrical inclusion protein of potato virus A is associated with a subpopulation of particles isolated from infected plants. Journal of General Virology. 89:829-838. Abstract
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2008.
Enzymatic activities and microbial communities in an Antarctic dry valley soil: Responses to C and N supplementation. Soil Biology & Biochemistry. 40:2130-2136. Abstract
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2008.
Exploiting regulatory variation to identify genes underlying quantitative resistance to the wheat stem rust pathogen Puccinia graminis f. sp. tritici in barley. Theoretical and Applied Genetics. 117:261-272. Abstract
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2008.
Gene expression profiling during asexual development of the late blight pathogen Phytophthora infestans reveals a highly dynamic transcriptome. Molecular Plant-Microbe Interaction. 21:433-447. Abstract
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2008.
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2008.
Genes driving potato tuber initiation and growth: identification based on transcriptional changes using the POCI array. Functional & Integrative Genomics. 8:329-340. Abstract
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2008.
Genetic diversity and population structure of pea (Pisum sativum L.) varieties derived from combined retrotransposon, microsatellite and morphological marker analysis. Theoretical and Applied Genetics. 117:413-424.
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2008.
Heading date QTL in a spring x winter barley cross evaluated in Mediterranean environments. Molecular Breeding. 21:455-471. Abstract
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2008.
The high affinity K+ transporter AtHAK5 plays a physiological role in planta at very low K+ concentrations and provides a caesium uptake pathway in Arabidopsis. Journal of Experimental Botany. 59:595-607. Abstract
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2008.
Immunogenicity of proteome-determined Mycobacterium avium subsp paratuberculosis-specific proteins in sheep with Paratuberculosis. Clinical and Vaccine Immunology. 15:1824-1833.
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2008.
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2008.
Impact of hydraulic suction history on crack growth mechanics in soil. Water Resources Research. 44:-W00C01. Abstract
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2008.
Increase in the fracture toughness and bond energy of clay by a root exudate. European Journal of Soil Science. 59:855-862. Abstract
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2008.
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2008.
Insights into the evolution of CCMs from comparisons with other resource acquisition and assimilation processes. Physiologia Plantarum. 133:4-14. Abstract
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2008.
Interval mapping of quantitative trait loci for corky ringspot disease resistance in a tetraploid population of potato (Solanum tuberosum subsp. tuberosum). American Journal of Potato Research. 85:129-139. Abstract
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2008.
Management to increase the depth of soft soil improves soil conditions and grapevine performance in an irrigated vineyard. Soil and Tillage Research. 98:68-80. Abstract
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2008.
Mapping adaptation of barley to droughted environments. Euphytica. 161:35-45. Abstract
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2008.
Mechanism of strong resistance to Potato leafroll virus infection in a clone of potato (Solanum tuberosum). Annals of Applied Biology. 152:339-347. Abstract
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2008.
Metabolic engineering of carotenoid biosynthesis in plants. Trends in Biotechnology. 26:139-145. Abstract
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2008.
Methods for evaluating gene expression from Affymetrix microarray datasets. BMC Bioinformatics. 9:-284. Abstract
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2008.
Molecular regulation of somatic embryogenesis in potato: an auxin led perspective. Plant Molecular Biology. 68:185-201. Abstract
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2008.
The Phytophthora infestans avirulence gene Avr4 encodes an RXLR-dEER effector. Molecular Plant-Microbe Interactions. 21:1460-1470. Abstract
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2008.
Phytophthora parsiana sp. nov., a new high-temperature tolerant species. Mycological Research. 112:783-794. Abstract
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2008.
A plant virus movement protein forms ringlike complexes with the major nucleolar protein, fibrillarin, in vitro. Journal of Molecular Biology. 376:932-937. Abstract
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2008.
Poly(T) variation within mitochondrial protein-coding genes in Globodera (Nematoda : Heteroderidae). Journal of Molecular Evolution. 66:197-209. Abstract
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2008.
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2008.
Relations between the oilseed rape volunteer seedbank, and soil factors, weed functional groups and geographical location in the UK. Ecological Modelling. 212:138-146. Abstract
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2008.
Response to comment on 'Phytoplankton calcification in a high CO2 world'. Science. 322:-1466.
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2008.
Restoration of soil physical and biological stability are not coupled in response to plants and earthworms. Ecological Restoration. 26:102-104. Abstract
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2008.
The role of rainfall intensity and soil in determining rates of flow through cryoturbated chalk. Pakistan Journal of Science and Industrial Research. 51:235-241.
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2008.
Small deletions in the potato leafroll virus readthrough protein affect particle morphology, aphid transmission, virus movement and accumulation. Journal of General Virology. 89:2037-2045. Abstract
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2008.
Solute movement through intact columns of cryoturbated Upper Chalk. Hydrological Processes. 22:2086-2093. Abstract
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2008.
The stem rust resistance gene Rpg5 encodes a protein with nucleotide binding site, leucine-rich and protein kinase domains. Proceedings of the National Academy of Sciences, USA. 105:14970-14975. Abstract
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2008.
Tissue-dependent limited pleiotropy affects gene expression in barley. Plant Journal. 56:287-296.
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2008.
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2008.
Accumulation and phosphatase-lability of organic phosphorus in fertilised pasture soils. Australian Journal of Agricultural Research. 58:47-55. Abstract
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2007.
Annual carbon fixation in terrestrial populations of Nostoc commune (Cyanobacteria) from an Antarctic dry valley is driven by temperature regime. Global Change Biology. 13:1224-1237. Abstract
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2007.
Antiviral activity of HPMPC (cidofovir) against orf virus infected lambs. Antiviral Research. 73:169-174. Abstract
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2007.
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2007.
Assessment of CaMV-mediated gene silencing and integration of CaMV into GM plants with a 35S RNA promoter. Environmental Biosafety Research. 6:259-270. Abstract
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2007.
The barley phytomer. Annals of Botany. 100:725-733. Abstract
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2007.
Cajal bodies and the nucleolus are required for a plant virus systemic infection. EMBO Journal. 26:2169-2179. Abstract
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2007.
Caspase-resistant VirD2 protein provides enhanced gene delivery and expression in plants. Plant Cell Reports. 26:1215-1219. Abstract
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2007.
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2007.
Concordant evolution of mitochondrial and nuclear genomes in the wheat pathogen Phaeosphaeria nodurum. Fungal Genetics and Biology. 44:764-772. Abstract
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2007.
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2007.
Development of a virus-induced gene silencing system in pearl millet. South African Journal of Botany. 73:339-339. Abstract
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2007.
Differential interaction of Aspergillus niger and Peniophora lycii phytases with soil particles affects the hydrolysis of inositol phosphates. Soil Biology & Biochemistry. 39:793-803. Abstract
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2007.
Do bacterial-feeding nematodes stimulate root proliferation through hormonal effects? Soil Biology & Biochemistry. 39:1816-1819. Abstract
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2007.
Doubled haploidy and induced mutation. Euphytica. 158:359-370. Abstract
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2007.
ECOGEN - Soil ecological and economic evaluation of genetically modified crops. Pedobiologia. 51:171-173. Abstract
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2007.
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2007.
Enhanced resistance and neutralization of defense responses by suppressors of RNA silencing. Virus Research. 130:103-109. Abstract
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2007.
Evaluation of effects of transgenic Bt maize on microarthropods in a European multi-site experiment. Pedobiologia. 51:207-218. Abstract
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2007.
Evolutionary control of leaf element composition in plants. New Phytologist. 174:516-523. Abstract
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2007.
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2007.
Genetically modified lignin belowground. Nature Biotechnology. 25:168-169. Abstract
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2007.
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2007.
Interaction of a plant virus-encoded protein with the major nucleolar protein fibrillarin is required for systemic virus infection. Proceedings of the National Academy of Sciences, USA. 104:11115-11120.
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2007.
The intragenic approach as a new extension to traditional plant breeding. Trends in Plant Science. 12:397-403. Abstract
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2007.
Meeting Report: The Aaronsohn-ITMI International Conference. Israel Journal of Plant Sciences. 55:315-319.
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2007.
Microbial and microfaunal community structure in cropping systems with genetically modified plants. Pedobiologia. 51:195-206. Abstract
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2007.
The mitochondrial subgenomes of the nematode Globodera pallida are mosaics: Evidence of recombination in an animal mitochondrial genome. Journal of Molecular Evolution. 64:463-471. Abstract
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2007.
Molecular identification of two stubby root nematode species. American Journal of Potato Research. 84:161-167. Abstract
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2007.
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2007.
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2007.
Non-invasive techniques for investigating and modelling root-feeding insects in managed and natural systems. Agricultural and Forest Entomology. 9:39-46.
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2007.
Point mutations in the potato leafroll virus major capsid protein alter virion stability and aphid transmission. Journal of General Virology. 88:1821-1830. Abstract
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2007.
Potato glycosterol rhamnosyltransferase, the terminal step in triose side-chain biosynthesis. Phytochemistry. 68:327-334. Abstract
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2007.
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2007.
A qualitative multi-attribute model for assessing the impact of cropping systems on soil quality. Pedobiologia. 51:239-250. Abstract
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2007.
Response of photosynthetic apparatus to moderate high temperature in contrasting wheat cultivars at different oxygen concentrations. Journal of Experimental Botany. 58:2133-2143. Abstract
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2007.
The resurgence of haploids in higher plants. Trends in Plant Science. 12:368-375. Abstract
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2007.
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2007.
Safety testing of GM-rice expressing PHA-E lectin using a new animal test design. Food and Chemical Toxicology. 45:364-377. Abstract
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2007.
Sequence and characterization of six mitochondrial subgenomes from Globodera rostochiensis: multipartite structure is conserved amongst close nematode relatives. Journal of Molecular Evolution. 65:308-315. Abstract
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2007.
Sexual reproduction facilitates the adaptation of parasites to antagonistic host environments: Evidence from empirical study on the wheat-Mycosphaerella graminicola system. International Journal of Parasitology. 37:861-870. Abstract
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2007.
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2007.
Significant difference in pathogencity between MAT1-1 and MAT1-2 isolates in the wheat pathogen Mycosphaerella graminicola.. Fungal Genetics and Biology. 44:339-346. Abstract
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2007.
Spatial pattern and species richness of boreonemoral forest understorey and its determinants - A comparison of differently managed forests. Forest Ecology & Management. 250:64-70. Abstract
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2007.
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2007.
Stability of recombinant plant viruses containing genes of unrelated plant viruses. Journal of General Virology. 88:1347-1355. Abstract
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2007.