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2005
Aflakpui GKS, Gregory PJ, Froud-Williams RJ.  2005.  Carbon (13C) and nitrogen (15N) translocation in a maize-Striga hermonthica association. Experimental Agriculture. 41:321-333. Abstract
Taylor MA, Ramsay G.  2005.  Carotenoid biosynthesis in plant storage organs: recent advances and prospects for improving plant food quality (Review). Physiologia Plantarum. 124:143-151. Abstract
Raven JA.  2005.  Cellular location of starch synthesis and evolutionary origin of starch genes. Journal of Phycology. 41:1070-1072. Abstract
Liu H, Hedley PE, Cardle L, Wright KM, Hein I, Marshall DF, Waugh R.  2005.  Characterisation and functional analysis of two barley caleosins expressed during barley caryopsis development. Planta. 221:513-522. Abstract
Sobczak M, Avrova AO, Jupowicz J, Phillips MS, Ernst K, Kumar A.  2005.  Characterisation of susceptibility and resistance responses to potato cyst nematode (Globodera spp.) infection of tomato lines in the absence and presence of the broad-spectrum nematode resistance Hero gene. Molecular Plant-Microbe Interactions. 18:158-168.
Grover SPP, McKenzie BM, Baldock JA, Papst WA.  2005.  Chemical characterisation of bog peat and dried peat of the Australian Alps. Australian Journal of Soil Research. 43:963-971. Abstract
Thomson NR, Yeats C, Bell K, Holden MTG, Bentley SD, Livingstone M, Cerde AM, Harris B, Doggett J, Ormond D et al..  2005.  The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to inter-species variation.. Genome Research. 15:629-640. Abstract
Molina-Cano J-L, Russell JR, Moralejo MA, Escacena JL, Arias G, Powell W.  2005.  Chloroplast DNA microsatellite analysis supports a polyphyletic origin for barley. Theoretical and Applied Genetics. 110:613-619.
Gregory PJ, Ingram JSI, Brklacich M.  2005.  Climate change and food security. Philosophical Transactions of the Royal Society of London - Series B. 360:2139-2148. Abstract
Giordano M, Beardall J, Raven JA.  2005.  CO2 concentrating mechanisms in algae: mechanisms, environmental modulation and evolution. Annual Review of Plant Biology. 56:99-131. Abstract
Liu J, Crawford JW, Leontiou KI.  2005.  Collapse of single stable states via a fractal attraction basin: analysis of a representative metabolic network. Proceedings of the Royal Society of London Series A. 461:2327-2338. Abstract
Woodhead M, Russell JR, Squirrell J, Hollingsworth PM, MacKenzie K, Gibby M, Powell W.  2005.  Comparative analysis of population genetic structure in Athyrium distentifolium (Pteridophyta) using AFLPs and SSRs from anonymous and transcribed gene regions. Molecular Ecology. 14:1681-1695. Abstract
Ibrahim AFM, Hedley PE, Cardle L, Kruger W, Marshall DF, Muehlbauer G, Waugh R.  2005.  A comparative analysis of transcript abundance using SAGE and Affymetrix arrays. Functional & Integrative Genomics. 5:163-174. Abstract
Tzortzakakis EA, Trudgill DL.  2005.  A comparative study of the thermal time requirements for embryogenesis in Meloidogyne javanica and M. incognita. Nematology. 7:313-315. Abstract
Griffiths BS, Caul S, Thompson J, Birch ANE, Scrimgeour CM, Andersen MN, Cortet J, Mess A, Sausse C, Lacroix B et al..  2005.  A comparison of soil microbial community structure, protozoa and nematodes in field plots of conventional and genetically modified maize expressing the Bacillus thuringiensis CryIAb toxin. Plant and Soil. 275:135-146. Abstract
Lehesranta SJ, Davies HV, Shepherd LVT, Nunan N, McNicol JW, Auriola S, Koistinen KM, Suomalainen S, Kokko HI, K SO.  2005.  Comparison of tuber proteomes of potato varieties, landraces and genetically modified lines. Plant Physiology. 138:1690-1699. Abstract
Shi B-J, Palukaitis P, Symons RH.  2005.  The conserved 5' termini of RNAs 1 and 2 of Tomato aspermy virus are dispensable for infection but affect virulence. Virus Genes. 30:181-191.
Choi SK, Palukaitis P, Min BE, Lee MY, Choi JK, Ryu KH.  2005.  Cucumber mosaic virus 2a polymerase and 3a movement proteins independently affect both virus movement and the timing of symptom development in zucchini squash. Journal of General Virology. 86:1213-1222. Abstract
2006
Graham MC, Farmer JG, Anderson P, Paterson E, Hillier SJ, Lumsdon DG, Bewley RJF.  2006.  Calcium polysulfide remediation of hexavalent chromium from chromite ore processing residue. The Science of the Total Environment. 364(1-3):32-44.
Gelan A.  2006.  Cash or food aid? A general equilibrium analysis for Ethiopia Development Policy Review. 24(5):601-624.
Thanh VTK, Orskov ER.  2006.  Causes of differences in urinary excretion of purine derivatives in buffaloes and cattle. Animal Science. 82(3):355-358.
Rungapamestry V, Duncan AJ, Fuller Z, Ratcliffe B.  2006.  Changes in glucosinolate concentrations, myrosinase activity and production of hydrolysis products of glucosinolates in cabbage (Brassica oleracea var. capitata) cooked for different durations. Journal of Agricultural and Food Chemistry. 54(20):7628-7634.
Osler GHR, Cole L, Keith AM.  2006.  Changes in oribatid mite community structure associated with the succession from heather (Calluna vulgaris) moorland to birch (Betula pubescens) woodland. Pedobiologia. 50(4):323-330.
Hillier S, Wilson MJ, Merriman RJ.  2006.  Clay mineralogy of the Old Red Sandstone and Devonian sedimentary rocks of Wales, Scotland, and England. Clay Minerals. 41(1):433-471.
Beale CM, Burfield IJ, Sim IMW, Rebecca GW, Pearce-Higgins JW, Grant MC.  2006.  Climate change may account for the decline in British ring ouzels Turdus torquatus. Journal of Animal Ecology. 75(3):826-835.
Midwood AJ, Gebbing T, Wendler R, Sommerkorn M, Hunt J, Millard P.  2006.  Collection and storage of CO2 for 13C analysis: an application to separate soil CO2 efflux into root and soil derived components. Rapid Communications in Mass Spectrometry. 20(22):3379-3384.
Matthews KB, Buchan K, Sibbald AR, Craw S.  2006.  Combining deliberative and computer-based methods for multi-objective land-use planning. Agricultural Systems. 87(1):18-37.
Hayati D, Slee W.  2006.  Combining qualitative and quantitative methods in the measurement of rural poverty: The case of Iran. Social Indicators Research. 75(3):361-394.
Redpath SM, Leckie F, Arroyo B, Amar A, Thirgood, S.J.; Redpath S.  2006.  Compensating for the costs of polygyny in hen harriers. Behavioural Ecology and Sociobiology. 60(3):386-391.
van Beinum WG, Meeussen JCL, van Riemsdijk WH.  2006.  Competitive sorption and diffusion of chromate and sulphate in a flow system with goethite in gel beads. Journal of Contaminant Hydrology. 86(3-4):262-278.
Urama KC, Penning WWE, Kamari J.  2006.  Cost-effectiveness analysis and the implementation of the WFD: review of available approaches and the role of model benchmarking. Archiv fur Hydrobiology: Large Rivers Supplement. 17:201-219.
Lynn A, Collins A, Fuller Z, Hillman K, Ratcliffe B.  2006.  Cruciferous vegetables and colo-rectal cancer. Proceedings of the Nutrition Society. 65(1):135-144.
Bos JIB, Kanneganti T-D, Young C, Cakir C, Huitema E, Win J, Armstrong MR, Birch PRJ, Kamoun S.  2006.  The C-terminal half of Phytophthora infestans RXLR effector AVR3a is sufficient to trigger R3a-mediated hypersensitivity and suppress INF1-induced cell death in Nicotiana benthamiana. Plant Journal. 48:165-176. Abstract
Gregory AS, Whalley WR, Watts CW, Bird NRA, Hallett PD, Whitmore AP.  2006.  Calculation of the compression index and precompression stress from soil compression test data. Soil and Tillage Research. 89:45-57. Abstract
Raven JA, Karley AJ.  2006.  Carbon sequestration: Photosynthesis and subsequent processes. Current Biology. 16:R165-R167. Abstract
Nuopponen M, Wikberg HI, Birch GM, J A-S, Maunu SL, Vuorinen T, Stewart D.  2006.  Characterization of 25 tropical hardwoods with Fourier transform infrared,ultraviolet resonance Raman and 13C cross-polarisation magic-angle spinning NMR spectroscopy. Journal of Applied Polymer Science. 102:810-819. Abstract
Johnson SN, Gregory PJ.  2006.  Chemically mediated host-plant location and selection by root-feeding insects. Physiological Entomology. 31:1-13. Abstract
Sunley RJ, Atkinson CJ, Jones HG.  2006.  Chill unit models and recent changes in the occurrence of winter chill and spring frost in the United Kingdom. Journal of Horticultural Science & Biotechnology. 81:949-958. Abstract
Raven JA, Beardall J.  2006.  Chorophyll fluorescence and ecophysiology: seeing red? New Phytologist. 169:449-451. Abstract
Kikuchi T, Shibuya H, Aikawa T, Jones JT.  2006.  Cloning and characterization of pectate lyases expressed in the esophageal gland of the pine wood nematode Bursaphelenchus xylophilus. Molecular Plant-Microbe Interactions. 19:280-287. Abstract
Meharg AA, Scrimgeour CM, Hossain SA, Fuller K, Cruickshank K, Williams PN, Kinniburgh DG.  2006.  Codeposition of organic carbon and arsenic in Bengal Delta aquifers. Environmental Science & Technology. 40:4928-4935. Abstract
Toth IK, Pritchard L, Birch PRJ.  2006.  Comparative genomics reveals what makes an enterobacterial plant pathogen. Annual Review of Phytopathology. 44:305-336. Abstract
Heckmann L, Griffiths BS, Caul S, Thompson J, Pusztai-Carey M, Moar, W.J, Andersen MN, Krogh PH.  2006.  Consequences for Protaphorura armata (Collembola: Onychiuridae) following exposure to genetically modified Bacillus thuringiensis (Bt) maize and non-Bt maize. Environmental Pollution. 142:212-216. Abstract
Luo ZW, Zhang Z, Leach L, Zhang RM, Bradshaw JE, Kearsey MJ.  2006.  Constructing genetic linkage maps under a tetrasomic model. Genetics. 172:2635-2645. Abstract
van Os H, Andrzejewski S, Bakker E, Barrena I, Bryan GJ, Caromel B, Ghareeb B, Isidore E, De Jong W, van Koert P et al..  2006.  Construction of a 10,000 marker ultradense genetic recombination map of potato: providing a framework for accelerated gene isolation and genomewide physical map. Genetics. 173:1075-1087. Abstract
Hopkins DW, Sparrow AD, Novis P, Gregorich EG, Elberling B, Greenfield LG.  2006.  Controls on the distribution of productivity and organic resources in Antarctic dry valley soils (Review). Proceedings of the Royal Society B. 273:2687-2695. Abstract
Winfield M, D'Amato GF, De Dominicis RI, Salimbeni P, Tucci GF.  2006.  A cytological and molecular study of the genera Scorzonera L. and Podospermum (L.) DC (Asteraceae). Caryologia. 59:153-163. Abstract
2007
Chaudri A, McGrath S, Gibbs P, Chambers B, Carlton-Smith C, Godley A, Bacon J, Campbell CD, Aitken M.  2007.  Cadmium availability to wheat grain in soils treated with sewage sludge or metal salts. Chemosphere. 66(8):1415-1423.
Bradford MA, Tordoff GM, Black HIJ, Cook R, Eggers T, Garnett MH, Grayston SJ, Hutcheson KA, Ineson P, Newington JE et al..  2007.  Carbon dynamics in a model grassland with functionally different soil communities. Functional Ecology. 21(4):690-697.
Gundelwein A, Muller-Lupp T, Sommerkorn M, Haupt ETK, Pfeiffer EM, Wiechmann H.  2007.  Carbon in tundra soils in the Lake Labaz region of arctic Siberia. European Journal of Soil Science. 58(5):1164-1174.
Mitchell RJ, Campbell CD, Chapman SJ, Osler GHR, Vanbergen AJ, Ross LC, Cameron CM, Cole L.  2007.  The cascading effects of birch on heather moorland: a test for the top-down control of an ecosystem engineer. Journal of Ecology. 95(3):540-554.
Kay D, Edwards AC, Ferrier RC, Francis C, Kay C, Rushby L, Watkins J, McDonald AT, Wyer M, Crowther J et al..  2007.  Catchment microbial dynamics: the emergence of a research agenda. Progress in Physical Geography. 31(1):59-76.
Foereid B, Barthram GT, Marriott CA.  2007.  The CENTURY model failed to simulate soil organic matter development in an acidic grassland. Nutrient Cycling in Agroecosystems. 78(2):143-153.
Artz RRE, Anderson IC, Chapman SJ, Hagn A, Schloter M, Potts JM, Campbell CD.  2007.  Changes in fungal community composition in response to vegetational succession during the natural regeneration of cutover peatlands. Microbial Ecology. 54(3):508-522.
Izumi H, Moore ERB, Killham K, Alexander IJ, Anderson IC.  2007.  Characterisation of endobacterial communities in ectomycorrhizas by DNA and RNA based molecular methods. Soil Biology and Biochemistry. 39(4):891-899.
Belzunce-Segarra MJ, Szefer P, Wilson MJ, Bacon J, Bolalek J.  2007.  Chemical forms and distribution of heavy metals in core sediments from the Gdansk Basin, Baltic Sea. Polish Journal of Environmental Studies. 16:505-515.
Sullivan PF, Sommerkorn M, Rueth HM, Nadelhoffer KJ, Shaver GR, Welker JM.  2007.  Climate and species affect fine root production with long-term fertilization in acidic tussock tundra near Toolik Lake, Alaska. Oecologia. 153(3):643-652.
Brooker RW, Young JC, Watt AD.  2007.  Climate change and biodiversity: impacts and policy development challenges - a European case study. International Journal of Biodiversity Science and Management. 3:12-30.
Smith P, Chapman SJ, Scott WA, Black HIJ, Wattenbach M, Milne R, Campbell CD, Lilly A, Ostle N, Levey P et al..  2007.  Climate change cannot be entirely responsible for soil carbon loss observed in England and Wales, 1978-2003. Global Change Biology. 13(12):2605-2609.
Robinson DT, Brown DG, Parker DC, Schreinemachers P, Janssen MA, Huigen M, Wittmer H, Gotts NM, Promburom P, Irwin E et al..  2007.  Comparison of empirical methods for building agent-based models in land use science. Journal of Land Use Science. 2(1):31-55.
Marrs RH, Galtress K, Tong C, Cox ES, Blackbird SJ, Heyes TJ, Pakeman RJ, Le Duc MG.  2007.  Competing conservation goals, biodiversity or ecosystem services : element losses and species recruitment in a managed moorland bracken model system. Journal of Environmental Management. 85(4):1034-1047.
Tetzlaff D, Soulsby C, Waldron S, Malcolm BDIAPJS, Lilly A, Youngson AF.  2007.  Conceptualisation of runoff processes using tracers and GIS analysis in a nested mesoscale catchment. Hydrological Processes. 21(10):1289-1307.
Young J, Richards C, Fischer A, Halada L, Kull T, Kuzniar A, Tartes U, Uzunov Y, Watt A.  2007.  Conflicts between biodiversity conservation and human acivities in the CEEC. Ambio. 36(7):545-550.
Marshall KB, White R, Fischer A.  2007.  Conflicts between humans over wildlife management: on the diversity of stakeholder attitudes and implications for conflict management. Biodiversity and Conservation. 16(11):3129-3146.
Bown JL, Pachepsky E, Eberst A, Bausenwein U, Millard P, Squire G, Crawford JW.  2007.  Consequences of intraspecific variation for the structure and function of ecological communities. I: Model development and predicted patterns of diversity. Ecological Modelling. 207(2-4):264-276.
Pachepsky E, Bown JL, Eberst A, Bausenwein U, Millard P, Squire G, Crawford JW.  2007.  Consequences of intraspecific variation for the structure and function of ecological communities. II Linking diversity and function. Ecological Modelling. 207(2-4):277-285.
Irvine RJ, Leckie F, Redpath SM.  2007.  Cost of carrying radio transmitters: a test with racing pigeons Columbia livia. Wildlife Biology. 13(3):238-243.
Roberts K, Granum E, Leegood RC, Raven JA.  2007.  C3 and C4 pathways of photosynthetic carbon assimilation in marine diatoms are under genetic, not environmental, control. Plant Physiology. 145:230-235. Abstract
Kim S-H, Ryabov EV, Kalinina N, Rakitina DV, Gillespie T, MacFarlane SA, Haupt S, Brown JWS, Taliansky ME.  2007.  Cajal bodies and the nucleolus are required for a plant virus systemic infection. EMBO Journal. 26:2169-2179. Abstract
Roberts AMI, Theobold CM, McNeil M.  2007.  Calibration of quantitative PCR assays. Journal of Agricultural Biological and Environmental Statistics. 12:364-378. Abstract
Roberts K, Granum E, Leegood RC, Raven JA.  2007.  Carbon acquisition by diatoms. Photosynthesis Research. 93:79-88. Abstract
Reavy B, Bagirova S, Chichkova NV, Fedoseeva SV, Kim S-H, Vartapetian AB, Taliansky ME.  2007.  Caspase-resistant VirD2 protein provides enhanced gene delivery and expression in plants. Plant Cell Reports. 26:1215-1219. Abstract
Artz RRE, Anderson IC, Chapman SJ, Hagn A, Schloter M, Potts JM, Campbell CD.  2007.  Changes in fungal community composition in response to vegetational succession during the natural regeneration of cutover peatlands. Microbial Ecology. 54:508-522. Abstract
Woodhall JW, Lees AK, Edwards SG, Jenkinson P.  2007.  Characterisation of Rhizoctonia solani from potato in Great Britain. Plant Pathology. 56:286-295. Abstract
Le Gall O, Sanfacon H, Ikegami M, Iwanami T, Jones AT, Karasev A, Lehto K, Wellink J, Wetzel T, Yoshikawa N.  2007.  Cheravirus and Sadwavirus: two unassigned genera of plant positive-sense single-stranded RNA viruses formerly considered atypical members of the genus Nepovirus (family Comoviridae). Archives of Virology. 152:1767-1774.
Mazzitelli L, Hancock RD, Haupt S, Walker PG, Pont SDA, McNicol JW, Cardle L, Morris J, Viola R, Brennan RM et al..  2007.  Co-ordinated gene expression during phases of dormancy release in raspberry (Rubus idaeus L.) buds.. Journal of Experimental Botany. 58:1035-1045. Abstract
Coates EM, Popa G, Gill CIR, McCann M, McDougall GJ, Stewart D, Rowland I.  2007.  Colon-available raspberry extract exhibit anti-cancer effects on in vitro models of colon cancer. Proceedings of the Nutrition Society. 66:67A-67A.
Coates EM, Popa G, Gill CIR, McCann MJ, McDougall GJ, Stewart D, Rowland I.  2007.  Colon-available raspberry polyphenols exhibit anti-cancer effects on in vitro models of colon cancer. Journal of Carcinogenesis. 6:1-13. Abstract
Glasbey CA, van der Heijden GWAM, Toh VFK, Gray A.  2007.  Colour displays for categorical images. Color Research and Application. 32:304-309. Abstract
Khondoker MR, Glasbey CA, Worton BJ.  2007.  A comparison of parametric and non-parametric methods for normalising cDNA microarray data. Biometrical Journal. 49:815-823. Abstract
Jones MR, Leith ID, Fowler D, Raven JA, Sutton MA, Nemitz E, Cape JN, Sheppard LJ, Smith RI, Theobold MR.  2007.  Concentration-dependent NH3 deposition processes for mixed moorland semi-natural vegetation. Atmospheric Environment. 41:2049-2060. Abstract
Jones MR, Leith ID, Fowler D, Raven JA, Sutton MA, Nemitz E, Cape JN, Sheppard LJ, Smith RI.  2007.  Concentration-dependent NH3 deposition processes for stomatal and non-stomatal moorland species. Atmospheric Environment. 41:8990-8994. Abstract
Sommerhalder RJ, McDonald BA, Zhan J.  2007.  Concordant evolution of mitochondrial and nuclear genomes in the wheat pathogen Phaeosphaeria nodurum. Fungal Genetics and Biology. 44:764-772. Abstract
Vanbergen AJ, Jones TH, Halls RS, Watt AD, Elston DA.  2007.  Consequences for a host-parasitoid interaction of host-plant aggregation, isolation and phenology. Ecological Entomology. 32:419-427. Abstract
Bown JL, Pachepsky E, Eberst A, Bausenwein U, Millard P, Squire GR, Crawford JW.  2007.  Consequences of intraspecific variation for the structure and function of ecological communities Part 1: Model development and predicted patterns of diversity. Ecological Modelling. 207:264-276. Abstract
Pachepsky E, Bown JL, Eberst A, Bausenwein U, Millard P, Squire GR, Crawford JW.  2007.  Consequences of intraspecific variation for the structure and function of ecological communities Part 2: Linking diversity and function. Ecological Modelling. 207:277-285. Abstract
Sakvarelidze L, Tao Z, Bush M, Roberts GR, Leader DJ, Doonan JH, Rawsthorne S.  2007.  Coupling the GAL4 UAS system with alcR for versatile cell type-specific chemically inducible gene expression in Arabidopsis. Plant Biotechnology Journal. 5:465-476. Abstract
Beerling DJ, Hewitt CN, Pyle JA, Raven JA.  2007.  Critical issues in trace gas biogeochemistry and global change. Philosophical Transactions of the Royal Society A - Mathematical Physical and Engineering Sciences. 365:1629-1642. Abstract
2008
Phillip S, MacMillan DC.  2008.  Car park charging in the Cairngorms National Park. Scottish Geographical Journal. 122(3):204-222.
Soulsby C, Neal C, Laudon H, Burns DA, Merot P, Bobnell M, Dunn SM, Tetzlaff D.  2008.  Catchment data for process conceptualization: simply not enough? Hydrological Processes. 22(12):2057-2061.
Deeks LK, Bengough AG, Stutter MI, Young IM, Zhang XX.  2008.  Characterisation of flow paths and saturated conductivity in a soil block in relation to chloride breakthrough. Journal of Hydrology. 348(3-4):431-441.
Matthews KB, Rivington M, Buchan K, Miller DG, Bellocchi G.  2008.  Characterising and communicating the agro-meteorological implications of climate change scenarios to land management stakeholders. Climate Research. 37:59-75.
Pidou M, Memon FA, Avery LM, Parsons SA, Liu S, Stephenson T, Jeffrey P, Jefferson B.  2008.  Chemical solutions for grey water recycling. Chemosphere. 71:147-155.
Winward GP, Avery LM, Stephenson T, Jefferson B.  2008.  Chlorine disinfection of greywater for reuse: effect of organics and particles. Water Research. 42(1-2):483-491.
Aitkenhead MJ, Aalders IH.  2008.  Classification of Landsat TM imagery for land cover using neural networks. International Journal of Remote Sensing. 29(7):2075.
Orr HG, Wilby RL, McKenzie-Hedger M, Brown I.  2008.  Climate change in the uplands: a UK perspective on safeguarding regulatory ecosystem services. Climate Research. 37(1):77-98.
Tingem M, Rivington M, Colls J.  2008.  Climate variability and maize production in Cameroon: simulating the effects of extreme dry and wet years. Singapore Journal of Tropical Geography. 29:357-370.
Perez-Espona S, Perez-Barberia FJ, McLeod JE, Jiggins CD, Gordon IJ, Pemberton JM.  2008.  Climbing ev'ry mountain: How do landscape features affect gene exchange among Scottish red deer populations? Deer, The Journal of the British Deer Society. 14:38-41.
Swain DL, Friend MA, Mayes RW, Wilson LA, Hutchings MR.  2008.  Combining an active transponder system with sprayed n-alkanes to quantify investigative and ingestive grazing behaviour of dairy cattle in pastures treated with slurry. Applied Animal Behaviour Science. 109(2-4):211-222.
Chapman SJ.  2008.  Comment on "Microbially derived inputs of soil organic matter: are current estimates too low?" Environmental Science and Technology. 42(8):3115-3115.
Favilli F, Egli M, Cherubini P, Sartori G, Haeberli W, Delbos E.  2008.  Comparison of different methods of obtaining a resilient organic matter fraction in Alpine soils. Geoderma. 145(3-4):355-369.
Tetzlaff D, McDonnell JJ, Uhlenbrook S, McGuire KJ, Bogaart P, Naef F, Baird AJ, Dunn SM, Soulsby C.  2008.  Conceptualising catchment processes: simply too complex? Hydrological Processes. 22(11):1727-1730.
Dunn SM, Freer J, Weiler M, Kirkby MJ, Seibert J, Quinn PF, Lischeid G, Tetzlaff D, Soulsby C.  2008.  Conceptualising in catchment modelling: simply learning? Hydrological Processes. 22(13):2389-2393.
Barkmann J, deVries K, Dietrich N, Glenk K, Gerold G, Keil A, Leemhuis C, Marggraf R.  2008.  Confronting unfamiliarity with ecosystem functions: the case for an ecosystem service approach to environmental valuation with stated preference methods. Ecological Economics. 65(1):48-62.
Avery LM, Frazer-Williams RAD, Winward G, Jeffrey P, Shirley-Smith C, Liu S, Memon FA, Jefferson B.  2008.  Constructed wetlands for grey water treatment. Ecohydrology and Hydrobiology. 7(3-4):191-200.
Frazer-Williams RAD, Avery LM, Winward G, Jeffrey P, Shirley-Smith C, Liu S, Jefferson B.  2008.  Constructed wetlands for urban grey water recycling. International Journal of Environmental Pollution. 33(1):93-109.
MacMillan DC, Phillip S.  2008.  Consumptive and non-consumptive values of wild mammals in Britain. Mammal Review. 38(2-3):189-204.
Hillier S, Pharande AL.  2008.  Contemporary pedogenic formation of palygorskite in irrigation induced saline sodic shrink-swell soils of Maharashtra, India. Clays and Clay Minerals. 56(5):531-548.
Ugolini FC, Hillier S, Certini G, Wilson MJ.  2008.  The contribution of aeolian material to an Aridisol from southern Jordan as revealed by the mineralogical analysis. Journal of Arid Environments. 72(8):1431-1447.
Trinder CJ, Artz RRE, Johnson D.  2008.  Contribution of plant photosynthate to soil respiration and dissolved organic carbon in a naturally recolonising cutover peatland. Soil Biology and Biochemistry. 40(7):1622-1628.
Stewart G, Cox ES, Le Duc MG, Pakeman RJ, Pullin AS, Marrs RH.  2008.  Control of bracken (Pteridium aquilinum): meta-analysis of a multi-site study in the UK. Annals of Botany. 101:957-970.
Bradshaw JE.  2008.  The Canon of Potato Science: 2. Population Genetics. Potato Research. 50:211-214. Abstract
Bradshaw JE.  2008.  The Canon of Potato Science: 4. Tetrasomic Inheritance. Potato Research. 50:219-222. Abstract
Grenville-Briggs LJ, Anderson VL, Fugelstad J, Avrova AO, Bouzenzana J, Williams A, Wawra S, Whisson SC, Birch PRJ, Bulone V et al..  2008.  Cellulose synthesis in Phytophthora infestans is required for normal appressorium formation and successful infection of potato. Plant Cell. 20:720-738. Abstract
Feuillet C, Langridge P, Waugh R.  2008.  Cereal breeding takes a walk on the wild side. Trends in Genetics. 24:24-32. Abstract
Pswarayi A, van Eeuwijk FA, Ceccarelli S, Grando S, Comadran J, Russell JR, Pecchioni N, Tondelli A, Akar T, Al-Yassin A et al..  2008.  Changes in allele frequencies in landraces, old and modern barley cultivars of marker loci close to QTL for grain yield under high and low input conditions. Euphytica. 163:435-447. Abstract
Kilminster KL, Walker DI, Thompson PA, Raven JA.  2008.  Changes in growth, internode distance and nutrient concentrations of the seagrass Halophila ovalis with exposure to sediment sulphide. Marine Ecology-Progress Series. 361:83-91. Abstract
Deeks LK, Bengough AG, Stutter MI, Young IM, Zhang X.  2008.  Characterisation of flow paths and saturated conductivity in a soil block in relation to chloride breakthrough. Journal of Hydrology. 348:431-441. Abstract
Peters JC, Lees AK, Cullen DW, Sullivan L, Stroud GP, Cunnington AC.  2008.  Characterisation of Fusarium sp. responsible for causing dry rot of potato in Great Britain. Plant Pathology. 57:262-271. Abstract
Adam MAM, Phillips MS, Jones JT, Blok VC.  2008.  Characterisation of the cellulose binding protein Mj-cbp-1 of the root knot nematode, Meloidogyne javanica. Physiological and Molecular Plant Pathology. 72:21-28. Abstract
Pylypenko LA, Phillips MS, Blok VC.  2008.  Characterisation of two Ukrainian populations of Globodera pallida in terms of their virulence and mtDNA and the biological assessment of a new resistant cultivar Vales Everest. Nematology. 10:585-590. Abstract
Gregory PJ, Ingram JSI.  2008.  Climate change and the current 'food crisis'. CAB Reviews: Perspectives in Agriculture, Veterinary Science, Nutrition and Natural Resources. 3, 090:1-10. Abstract
Kasprowicz L, Malloch G, Foster S, Pickup J, Zhan J, Fenton B.  2008.  Clonal turnover of MACE-carrying peach-potato aphids (Myzus persicae (Sulzer), Homoptera: Aphididae) colonizing Scotland. Bulletin of Entomological Research. 98:115-124. Abstract
Sharma SK, Millam S, Bryan GJ, Hein I.  2008.  Cloning and molecular characterisation of a potato SERK gene transcriptionally induced during initiation of somatic embryogenesis. Planta. 228:319-330. Abstract
Holden N, Pritchard L, Toth IK.  2008.  Colonisation outwith the colon: plants as an alternative environmental reservoir for human pathogenic enterobacteria. FEMS Microbiology ReviewsFEMS Microbiology Reviews. 33:689-703.
Ram JC, Woche SK, Bachmann J, Goebel MO, Hallett PD.  2008.  Comparing capillary rise contact angles of soil aggregates and homogenised soil. Geoderma. 146:336-343. Abstract
Griffiths DW, Shepherd T, Stewart D.  2008.  Comparison of the calystegine composition and content of potato sprouts and tubers from Solanum tuberosum group Phureja and Solanum tuberosum group Tuberosum. Journal of Agricultural and Food Chemistry. 56:5197-5204.
Abecia L, Balcells J, Fondevila M, Belenguer A, Holtrop G, Lobley GE.  2008.  Contribution of gut microbial lysine to liver and milk amino acids in lactating does. British Journal of Nutrition. 100:977-983.
White PCL, B M, Marion G, Hutchings MR.  2008.  Control of bovine tuberculosis in British livestock: there is no 'silver bullet'. Trends in Microbiology. 16:420-427. Abstract
Shi B-J, Symons RH, Palukaitis P.  2008.  The cucumovirus 2b gene drives selection of inter-viral recombinants affecting the crossover site, the acceptor RNA and the rate of selection. Nucleic Acids Research. 36:1057-1071. Abstract
McDougall GJ, Kulkarni NK, Stewart D.  2008.  Current developments on the inhibitory effects of berry polyphenols on digestive enzymes. Biofactors. 34:73-80. Abstract
Gabrenaite-Verhouskaya R, Andreev IA, Kalinina NO, Torrance L, Taliansky ME, Makinen K.  2008.  Cylindrical inclusion protein of potato virus A is associated with a subpopulation of particles isolated from infected plants. Journal of General Virology. 89:829-838. Abstract
2009
Aspinall RJ, Miller JA, Franklin J.  2009.  Calculations on the back of a climate envelope: addressing the geography of species distributions. Letter to Proceedings of the National Academy of Sciences on the paper: Beale, C., Lennon, J. and Gimona, A. (2008) Opening the climate envelope reveals no macroscale associations with climate in European birds. PNAS, 105, 14908-14912.. 106(16)
Aspinall RJ, Miller JA, Franklin J.  2009.  Calculations on the back of a climate envelope: Addressing the geography of species distributions. Proceedings of the National Academy of Sciences, USA. 106(16):E44.
Irvine RJ, Fiorini S, McLeod J, Turner A, van der Wal R, Armstrong H, Yearley S, White PCL.  2009.  Can managers inform models? Integrating local knowledge into models of red deer habitat use Journal of Applied Ecology. 46(2):344-352.
Townsend SE, Newey SJ, Thirgood SJ, Matthews L, Haydon DT.  2009.  Can parasites drive population cycles in mountain hares? Proceedings of the Royal Society of London, B. 276(1662):1611-1617.
Lienhoop N, Fischer A.  2009.  Can you be bothered? The role of participant motivation in the valuation of species conservation measures Journal of Environmental Planning and Management. 52(4):519-534.
Chapman SJ, Bell JS, Donnelly D, Lilly A.  2009.  Carbon stocks in Scottish peatlands. Soil Use and Management. 25:105-112.
Simonsson M, Hillier S, Oborn I.  2009.  Changes in clay minerals and potassium fixation capacity as a result of release and fixation of potassium in long-term field experiments. Geoderma. 151(3-4):109-120.
Rothwell JJ, Futter MN, Dise NB.  2009.  A classification and regression tree model of controls on dissolved inorganic nitrogen leaching from European forests. Environmental Pollution. 156(2):544-552.
Bodeker ITM, Nygren CMR, Taylor AFS, Olson A, Lindahl BD.  2009.  ClassII peroxidase-encoding genes are present in a phylogenetically wide range of ectomycorrhizal fungi. ISME Journal. 3(12):1387-1395.
Bodecker ITM, Nygren CMR, Taylor AFS, Olson A, Lindahl BD.  2009.  ClassII peroxidase-encoding genes are present in a phylogenetically wide range of ectomycorrhizal fungi Ectomycorrhizal ClassII peroxidase-encoding genes. The ISME Journal. 3:1387-1395.
Blackstock KL, Dunglinson J, Matthews KB, Dilley R, Futter M.  2009.  Climate proofing Scottish River Basin Planning: A future challenge. Environmental Policy and Governance. 19(6):374-387.
Potts JM, Chapman SJ, Towers W, on values Campbell C 'BCD, change in thesoil, implications for monitoring' by R.M. Lark BPH, of Science KEJSGJD.  2009.  Comments on 'Baseline values and change in the soil, and implications for monitoring' by R.M. Lark, P.H. Bellamy and G.J.D. Kirk. European Journal of Soil Science. 60:481-483.
Paterson E.  2009.  Comments on the Regulatory Gate Hypothesis and implications for C-cycling in soil. Soil Biology and Biochemistry. 41(6):1352-1354.
Howgate OR, Kenyon W.  2009.  Community co-operation with natural flood management: A case study in the Scottish Borders. Area.. 41(3):329-340.
Grover DP, Zhang ZL, Readman JW, Zhou JL.  2009.  A comparison of three analytical techniques for the measurement of steroidal estrogens in environmental water samples. Talanta. 78(3):1204-1210.
Aalders IH, Ball B, Black HIJ, Campbell CD, Griffiths B, Hopkins D, Hough RL, Lilly A, McKenzie B, Rees RM et al..  2009.  Considerations for Scottish soil monitoring in the European context. European Journal of Soil Science. 60(5):833-843.
Gimona A, Messager P, Occhi M.  2009.  CORINE-based landscape indices weakly correlate with plant species richness in a northern European landscape transect. Landscape Ecology. 24(1):53-64.
Tingem M, Rivington M, Bellocchi G, Azam-Ali S, Colls J.  2009.  Crop yield model validation for Cameroon. Theoretical and Applied Climatology. 96(3-4):275-280.
Peter KA, Gildow FE, Palukaitis P, Gray SM.  2009.  The C-terminus of the Polerovirus P5 readthrough domain limits virus infection to the phloem. Journal of Virology. 83:5419-5429. Abstract
Hillier J, Hawes C, Squire GR, Hilton A, Wale S, Smith P.  2009.  The carbon footprints of food crop production. International Journal of Agicultural Sustainability. 7:107-118.
Eaton SL, Anderson MJ, Hamilton S, Gonz L, Sales J, Jeffrey M, Reid HW, Rocchi MA, Chianini F.  2009.  CD21 B cell populations are altered following subcutaneous scrapie inoculation in sheep. Veterinary Immunology and Immunopathology. 131:105-109.
Hudacsek P, Bransby MF, Hallett PD, Bengough AG.  2009.  Centrifuge modelling of climatic effects on clay embankments. Proceedings of the Institution of Civil Engineers - Engineering Sustainability. 162:91-100.
Koza A, Hallett PD, Moon CD, Spiers AJ.  2009.  Characterisation of a novel air-liquid interface biofilm of Pseudomonas fluorescens SBW25. Microbiology. 155:1397-1406.
Adam MAM, Phillips MS, Tzortzakakis M, Blok VC.  2009.  Characterisation of mjap genes encoding novel secreted proteins from the root-knot nematode, Meloidogyne javanica. Nematology. 11:253-265.
Canto T, Aranda MA, Fereres A.  2009.  Climate change effects on physiology and population processes of hosts and vectors that influence the spread of hemipteran-borne plant viruses. Global Change Biology. 15:1884-1894.
Prashar A, Hocking PM, Erichsen JT, Fan Q, Saw S-M, Guggenheim JA.  2009.  Common determinants of body size and eye size in chickens from an advanced intercross line. Experimental Eye Research. 89:42-48.
Ziegler A, Cowan GH, Torrance L.  2009.  Comparative sequence analysis and serological and infectivity studies indicate that cocksfoot mild mosaic virus is a member of the genus Panicovirus. Archives of Virology. 154:1545-1549.
Schreiber AWJ, Sutton T, Caldo RA, Kalashyan E, Lovell B, Mayo G, Muehlbauer G, Druka A, Waugh R, Wise RP et al..  2009.  Comparative transcriptomics in the Triticeae. BMC Genomics. 10:-285. Abstract
Barker H, McGeachy KD, Toplak N, Gruden K, Zel J, Browning I.  2009.  Comparison of genome sequence of PVY isolates with biological properties. American Journal of Potato Research. 86:227-238.
Van Toor R, Malloch G, Fenton B.  2009.  A concept for management of virus-vectors and insecticide resistance in Myzus persicae on potatoes. Redia. XCII:219-221.
Tilston EL, Szili-Kov T, Hopkins DW.  2009.  Contributions of labile and resistant organic materials to the immobilization of inorganic soil N when used in the restoration of abandoned agricultural fields. Soil Use and Management. 25:168-174. Abstract
Cockell CS, Kaltenegger L, Raven JA.  2009.  Cryptic photosynthesis - extrasolar planetary oxygen without a surface biological signature. Astrobiology. 9:623-636.
Squire GR, Hawes C, Begg GS, Young MW.  2009.  Cumulative impact of GM herbicide-tolerant cropping on arable plants assessed through species-based and functional taxonomies. Environmental Science and Pollution Research. 16:85-94. Abstract
2010
Nayak DR, Miller DR, Nolan AJ, Smith P, Smith JU.  2010.  Calculating carbon budgets of wind farms on Scottish peatlands. Mires and Peat, Special Volume: Wind Farms on Peatland, 2008-2010. 4(Art. 9):1-23.
MacMillan DC, Phillip S.  2010.  Can economic incentives resolve conservation conflict: The case of wild deer management and habitat conservation in the Scottish Highlands. Human Ecology. 38(4):485-493.
Hanson S, Nicholls RJ, Balson P, Brown I, French JR, Spencer T.  2010.  Capturing coastal geomorphological change within regional integrated assessment: an outcome-driven fuzzy logic approach. Journal of Coastal Research. 26(5):831-842.
Aspinall RJ.  2010.  A century of physical geography research in the Annals. Annals of the Association of American Geographers. 100(5):1049-1059.
Andersen R, Grasset L, Thormann MN, Rochefort L, Francez AJ.  2010.  Changes in microbial community structure and function following Sphagnum peatland restoration. Soil Biology and Biochemistry. 42(2):291-301.
Singh BK.  2010.  Climate change and human health: an environmental perspective. Climate Research. 41(1):41-44.
Munang R, Rivington M, Takle ES, Mackey B, Thiaw I, Liu J.  2010.  Climate information and capacity needs for ecosystem management under a changing climate. Procedia Environmental Sciences. 1:206-227.
Conniff A, Craig T, Laing R, Galan-Diaz C.  2010.  A comparison of active navigation and passive observation of desktop models of future built environments. Design Studies. 31(5):419-438.
Farmer JG, Eades LJ, Graham MC, Cloy JM, Bacon JR.  2010.  A comparison of the isotopic composition of lead in rainwater, surface vegetation and tree bark at the long-term monitoring site, Glensaugh, Scotland in 2007. The Science of the Total Environment. 408(17):3704-3710.
Richards M, McDonald AJS, Aitkenhead MJ.  2010.  Competition indices for predicting the radial growth of Scots pine in spatially heterogeneous forest. Ecological Modelling. 221(13-14):1649-1654.
Smith P, Bhogal P, Edgington P, Black H, Lilly A, Barraclough D, Worrall F, Hillier J, Merrington G.  2010.  Consequences of feasible future agricultural land use change on soil organic carbon stocks and greenhouse gas emissions in Great Britain. Soil Use and Management. 26(4):381-398.
Marshall K, Blackstock KL, Dunglinson J.  2010.  A contextual framework for understanding good practice in integrated catchment management. Journal of Environmental Planning and Management. 53(1):63-89.
Curlevski NJA, Xu Z, Anderson IA, Cairney JWG.  2010.  Converting Australian tropical rainforest to native Araucariaceae plantations alters soil fungal communities. Soil Biology and Biochemistry. 42(1):14-20.
Maderova L, Dawson JJC, Paton GI.  2010.  Cu and Ni mobility and bioavailability in sequentially conditioned soils. Water, Air and Soil Pollution. 210(1-4):63-73.
Harrison A, Newey SJ, Gilbert L, Haydon DT, Thirgood SJ.  2010.  Culling wildlife hosts to control disease: mountain hares, red grouse and louping ill virus. Journal of Applied Ecology. 46(4):926-930.
Jones HG.  2010.  Can water droplets on leaves cause leaft scorch? New Phytologist. 185:865-867.
Hedley PE, Russell JR, Jorgensen L, Gordon S, Morris JA, Hackett CA, Cardle L, Brennan RM.  2010.  Candidate genes associated with bud dormancy release in blackcurrant (Ribes nigrum L.). BMC Plant Biology. 10:-202.
Sonnenberg R, Bransby MF, Hallett PD, Bengough AG, Mickovski SB, Davies MCR.  2010.  Centrifuge modelling of soil slopes reinforced with vegetation. Canadian Geotechnical Journal. 47:1415-1430.
Newton AC, Akar T, Baresel JP, Bebeli PJ, Bettencourt E, Bladenopoulos KV, Czembor JH, Fasoula DA, Katsiotis A, Koutis K et al..  2010.  Cereal landraces for sustainable agriculture. A review (Review). Agronomy for Sustainable Development. 30:237-269.
Pattemore JA, Rice N, Marshall DF, Waugh R, Henry RJ.  2010.  Cereal variety identification using MALDI-TOF mass spectrometry SNP genotyping. Journal of Cereal Science. 52:356-361.
Dagleish MP, Finlayson J, Bayne C, MacDonald S, Sales J, Hodgson JC.  2010.  Characterisation and time course of pulmonary lesions in calves after intratracheal infection with Pasteurella multocida A:3. Journal of Comparative Pathology. 142:157-169.
Mascia T, Cillo F, Fanelli V, Finetti-Sialer MM, De Stradis A, Palukaitis P, Gallitelli D.  2010.  Characterization of the interactions between Cucumber mosaic virus and Potato virus Y in mixed infections in tomato. Molecular Plant-Microbe Interactions. 23:1514-1524.
Feng X, Simpson AJ, Gregorich EG, Elberling B, Hopkins DW, Sparrow AD, Novis PM, Greenfield LG, Simpson MJ.  2010.  Chemical characterization of microbial-dominated soil organic matter in the Garwood Valley, Antarctica. Geochimica et Cosmochimica Acta. 74:6485-6498.
Elderfield H, Riebesell U, Raven JA, Gattuso JP, Lipps J.  2010.  Closure threat to key museum research facility. Nature. 465:-1005.
Mitchell C, Johnson SN, Gordon SC, Birch ANE, Hubbard SF.  2010.  Combining plant resistance and a natural enemy to control Amphorophora idaei. BioControl. 55:321-327.
Chen XY, Daniell TJ, Neilson R, O'Flaherty V, Griffiths BS.  2010.  A comparison of molecular methods for monitoring soil nematodes and their use as biological indicators. European Journal of Soil Science. 46:319-324.
Denwood MJ, Reid SWJ, Love S, Nielsen MK, Matthews L, McKendrick IJ, Innocent GT.  2010.  Comparison of three alternative methods for analysis of equine faecal egg count reduction test data.. Preventive Veterinary Medicine. 93:316-323.
Smith P, Gregory PJ, van Vuuren D, Obersteiner M, Havlik P, Rounsevell M, Woods J, Stehfest E, Bellarby J.  2010.  Competition for land. Philosophical Transactions of the Royal Society of London B - Biological Sciences. 365:2941-2957.
McGavin WJ, McMenemy LS, MacFarlane SA.  2010.  The complete sequence of a UK strain of Black raspberry necrosis virus. Archives of Virology. 155:1897-1899.
Dupuy L, MacKenzie J, Haseloff J.  2010.  Coordination of plant cell division and expansion in a simple morphogenetic system. Proceedings of the National Academy of Sciences, USA. 107:2711-2716.
Bartlett MD, Briones MJI, Neilson R, Schmidt O, Spurgeon D, Creamer RE.  2010.  A critical review of current methods in earthworm ecology: From individuals to populations (Review). European Journal of Soil Biology. 46:67-73.
Gonz I, Mart I, Rakitina DV, Lewsey MG, Atencio FA, Llave C, Kalinina NO, Carr JP, Palukaitis P, Canto T.  2010.  Cucumber mosaic virus 2b protein subcellular targets and interactions: Their significance to RNA silencing suppressor activity. Molecular Plant-Microbe Interactions. 23:294-303.
Raven JA.  2010.  Cyanotoxins: A poison that frees phosphate. Current Biology. 20:R850-R852.
2011
Thornton B, Zhang ZL, Mayes RW, Hogberg MN, Midwood AJ.  2011.  Can gas chromatography combustion isotope ratio mass spectrometry be used to quantify organic compound abundance? Rapid Communications in Mass Spectrometry. 23:2433-2438.
Beesley L, Dickinson N.  2011.  Carbon and trace element fluxes in the pore water of an urban soil following greenwaste compost, woody and biochar amendments, inoculated with the earthworm Lumbricus terrestris. Soil Biology and Biochemistry. 43:188-196.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.