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In Press
Mitchell RJ, Broome A, Beaton JK, Bellamy PE, Ellis CJ, Hester AJ, Hodgetts NG, Iason GR, Littlewood NA, Newey S et al..  In Press.  Challenges in assessing the ecological impacts of tree diseases and mitigation measures: the case of Hymenoscyphus fraxineus and Fraxinus excelsior. Baltic Forestry. 23:116-140.
Pecinka A, Chevalier C, Colas I, Kalantidis K, Varotto S, Krugman T, Michailidis C, Vallés MP, Muñoz A, Pradillo M.  In Press.  Chromatin dynamics during interphase and cell division similarities and differences between model and crop plants. Journal of Experimental Botany, Published online..
2022
Fisher JC, Rankin E, Irvine KN, Goddard MA, Davies ZG, Dallimer M.  2022.  Can biodiverse streetscapes mitigate the effects of noise and air pollution on human wellbeing. Environmental Research. 212:Art.No.113154.
Maclean L, Hague A, Eastwood A, Marshall K, Lorenzo-Arribas A, Herrett S.  2022.  Clunes and the Tom an Eirannaich woodland Exploring the perceived impacts of different management interventions on woodland benefits. Workshop report. https://www.hutton.ac.uk/sites/default/files/files/research/srp2016-21/WP_1_3_2_Clunes_Woodland_Workshop_Report_v5.pdf.
Shu-Yi-Dan Z, Huang F-YH, Xin-Yuan Z, Chenshuo L, Ming-Kang J, Neilson R, Li HL, Jian-Qiang S.  2022.  Conurbation size drives antibiotic resistance along the river. Science of the Total Environment.
2021
Berghuijs HNC, Weih M, van der Werf W, Karley AJ, Adam E, Villegas-Fernandez AM, Kiaer LP, Newton AC, Scherber C, Tavoletti S et al..  2021.  Calibrating and testing APSIM for wheat-faba bean pure cultures and intercrops across Europe. Field Crops Research. 264:ArticleNo.108088.
Herman NC, Berghuijs MW, van der Werf W, Karley AJ, Adam E, Villegas-Fernández AM, Kiær LP, Newton AC, Scherber C, Tavoletti S et al..  2021.  Calibrating and testing APSIM for wheat-faba bean pure cultures and intercrops across Europe. Field Crops Research. 264:ArticleNo.108088..
Ravazzoli E, Dalla Torre C, Da Re R, Govigli VM, Secco L, Górriz-Mifsud E, Pisani E, Barlagne C, Baselice A, Bengoumi M et al..  2021.  Can social innovation make a change in European and Mediterranean marginalized areas? Social innovation impact assessment in agriculture, fisheries, forestry and rural development Sustainability. 13:ArticleNo.1823.
Penhaul Smith JK, Hughes AD, McEvoy L, Thornton B, Day JG.  2021.  The carbon partitioning of glucose and DIC in mixotrophic, heterotrophic and photoautotrophic cultures of Tetraselmis suecica. Biotechnology Letters. Published online..
Byg A, Novo P, Kyle C.  2021.  Caring for Cinderella : Perceptions and experiences of peatland restoration in Scotland. People and Nature. Published online..
Malerba ME, Marshall DJ, Palacios MM, Raven JA, Beardall J.  2021.  Cell size influences inorganic carbon acquisition in artificially selected phytoplankton. New Phytologist. 229:2647-2659.
Kanetis L, Pittas L, Nikoloudakis N, Cooke DEL, Ioannou N.  2021.  Characterization of Phytophthora infestans populations in Cyprus, the southernmost potato-producing European country. Plant Disease. Published online.
de Oliveira Mendes G, Bahri-Esfahani J, Hillier S, George TS, Gadd GM.  2021.  Chemical and physical mechanisms of fungal bioweathering of rock phosphate. Geomicrobiology Journal. 38:384-394.
de Vega D, Holden N, Hedley PE, Morris J, Luna E, Newton AC.  2021.  Chitosan primes plant defence mechanisms against Botrytis cinerea, including expression of Avr9/Cf-9 rapidly-elicited genes. Plant, Cell and Environment. 44:290-303.
Premrov A, Wilson D, Saunders M, Yeluripati J, Renou-Wilson F.  2021.  CO2 fluxes from drained and rewetted peatlands using a new ECOSSE model water table simulation approach. Science of Total Environment. 754:ArticleNo.142433.
Scolari LM, Hancock RD, Hedley PE, Morris J, Smith K, Graham J.  2021.  Combining QTL mapping and gene expression analysis to elucidate the genetic control of "crumbly" fruit in red raspberry (Rubus idaeus L.). Agronomy. 11:ArticleNo.794.
Piras S, Pancotto F, Righi S, Vittuari M, Setti M.  2021.  Community social capital and status: The social dilemma of food waste. Ecological Economics. 183:ArticleNo.106954.
Raittz RT, Reginatto De Pierri C, Maluk M, Bueno Batista M, Carmona M, Junghare M, Faoro H, Cruz LM, Battistoni F, de Souza E et al..  2021.  Comparative genomics provides insights into the taxonomy of Azoarcus and reveals separate origins of Nif genes in the proposed Azoarcus and Aromatoleum genera. Genes. 12:ArticleNo.71.
Orlando V, Edwards SG, Neilson R, Prior T, Roberts DM, Back M.  2021.  Comparing the efficiency of six common methods for DNA extraction from root-lesion nematodes (Pratylenchus spp.). Nematology. 23:415-423.
Eastwood A, Juárez-Bourke A, Herrett S, Hague A.  2021.  Connecting young people with greenspaces: the case for participatory video. People and Nature. Published online..
Stam R, Motion GB, Martinez-Heredia V, Boevink PC, Huitema E.  2021.  A conserved oomycete CRN effector targets tomatoTCP14-2 to enhance virulence. Molecular Plant-Microbe Interactions. 34:309-318.
Creaney R, Reid L, Currie M.  2021.  The contribution of healthcare smart homes to older people's wellbeing: a new conceptual framework. Wellbeing, Space and Society. 2:ArticleNo.100031.
Morera-Margarit P, Pope TW, Mitchell C, Karley AJ.  2021.  Could bacterial associations determine the success of weevil species? Annals of Applied Biology. 178:51-61.
Mitchell RJ, Bellamy P, Broome A, Ellis C, Hewison R, Iason G, Littlewood N, Newey S, Pozsgai G, Dunan R et al..  2021.  Cumulative impact assessments of multiple host species loss from plant diseases show disproportionate reductions in associated biodiversity. Journal of Ecology.
Eastwood A, Fischer A, Hague A, Brown KM.  2021.  A cup of tea? - The role of social dimensions in land managers' adaptations to policy change Land Use Policy. 113:Paper105926.
Eastwood A, Fischer A, Hague A, Brown KM.  2021.  A cup of tea? - The role of social dimensions in land managers' adaptations to policy change Land Use Policy. 113:Paper105926.
Eastwood A, Fischer A, Hague A, Brown KM.  2021.  A cup of tea? - The role of social dimensions in land managers' adaptations to policy change Land Use Policy. 113:Paper105926.
2020
Barton CM, Alberti M, Ames D, Atkinson JA, Bales J, Burke E, Chen M, Diallo SY, Earn DJD, Fath B et al..  2020.  Call for transparency of COVID-19 models. Science. 368:482-483.
Zhen X, Qu M, Liu S, Duan X, Wang X, Brown LK, George TS, Zheng L, Feng G.  2020.  Carbon addition reduces labile soil phosphorus by increasing microbial biomass phosphorus in intensive agricultural systems. Soil Use and Management. 36:536-546.
Hewett CJM, Wilkinson ME, Jonczyk J, Quinn PF.  2020.  Catchment systems engineering: an holistic approach to catchment management. WIRESs Water. :ArticleNo.e1417.
Looseley ME, Griffe LL, Büttner B, Wright KM, Bayer MM, Coulter M, Thauvin JN, Middlefell-Williams J, Maluk M, Okpo A et al..  2020.  Characterisation of barley landraces from Syria and Jordan for resistance to rhynchosporium and identification of diagnostic markers for Rrs1Rh4. Theoretical and Applied Genetics. 133:1243-1264.
Bitomský M, Mládková P, Pakeman RJ, Duchoslav M.  2020.  Clade composition of a plant community indicates its phylogenetic diversity. Ecology and Evolution. 10:3747-3757.
Vinnepand M, Fischer P, Fitzsimmons K, Thornton B, Fiedler S, Vott A.  2020.  Combining inorganic and organic carbon stable isotope signatures in the Schwalbenberg Loess-palaeosol-sequence near Remagen (Middle Rhine Valley, Germany). Frontiers in Earth Science. 8:ArticleNo.276.
Revell P, Dinnie L.  2020.  Community resilience and narratives of community empowerment in Scotland. Community Development Journal. 55:218-236.
Karavidas I, NtatsiI G, Ntanasi T, Vlachos I, Tampakaki A, Iannetta PPM, Savvas D.  2020.  Comparative assessment of different crop rotation schemes for organic common bean production. Agronomy. 10:ArticleNo.1269.
Li Q, Ding GD, Yang NM, White PJ, Ye XS, Cai HM, Lu JW, Shi L, Xu FS.  2020.  Comparative genome and transcriptome analysis unravels key factors of nitrogen use efficiency in Brassica napus L. Plant Cell and Environment. 43:712-731.
Moing A, Allwood JW, Aharoni A, Baker J, Beale MH, Ben-Dor S, Biais B, Brigante F, Burger Y, Deborde C et al..  2020.  Comparative metabolomics and molecular phylogenetics of melon (Cucumis melo, Cucurbitaceae) biodiversity. Metabolites. 10
Duan YF, Duan SG, Armstrong MR, Xu JF, Zheng HJYJ, Chen XW, Hein I, Li GC, Jin LP.  2020.  Comparative transcriptome profiling reveals compatible and incompatible patterns of potato toward phytophthora infestans. G3- Genes Genomes Gemnetics. 10:623-634.
Dumuid D, Pedisic Z, Palarea-Albaladejo J, Martin-Fernandez JA, Hron K, Olds T.  2020.  Compositional data analysis in time-use epidemiology: what, why, how. International Journal of Environmental Research and Public Health. 17:ArticleNo.2220.
Squazzoni F, Polhill JG, Edmonds B, Ahrweiler P, Antosz P, Scholz G, Chappin É, Borit M, Verhagen H, Giardini F et al..  2020.  Computational models that matter during a global pandemic outbreak: A call to action. Journal of Artificial Societies and Social Simulation. 23:ArticleNo.10.
Hashemi F, Pohle I, Pullens JWM, Tornbjerg H, Kyllmar K, Marttila H, Lepistö A, Kløve B, Futter M, Kronvang B.  2020.  Conceptual mini-catchment typologies for testing dominant controls of nutrient dynamics in three nordic countries. Water. 12:ArticleNo.1776.
Evans KL, Ewen JG, Guillera-Arroita G, Johnson JA, Penteriani V, Ryan SJ, Sollmann R, Gordon IJ.  2020.  Conservation in the maelstrom of Covid-19-a call to action to solve the challenges, exploit opportunities and prepare for the next pandemic. Animal Conservation. 23:235-238.
Morera-Margarit P, Pope TW, Mitchell C, Karley AJ.  2020.  Could bacterial associations determine the success of weevil species? Annals of Applied Biology.
Stutter MI, Wyness A, Watson H, Dodd N.  2020.  Coupled macronutrient cycling in stream biofilms: effects of stoichiometry, light and temperature. Science of the Total Environment. 703:ArticleNumber134880.
Kalinina NO, Khromov A, Love AJ, Taliansky ME.  2020.  CRISPR applications in plant virology: virus resistance and beyond. Phytopathology. 110:18-28.
Casetou-Gustafson S, Grip H, Hillier S, Linder S, Olsson BA, Simonsson M, Stendahl J.  2020.  Current, steady-state and historical weathering rates of base cations at two forest sites in northern and southern Sweden: a comparison of three methods. Biogeosciences. 17:281-304.
2019
Melo VF, Testoni SA, Dawson LA, de Lara AG, da Silvia Salvador F.  2019.  Can analysis of a small clod of soil help to solve a murder case? Science and Justice. 59:667-677.
van Kooten GC, Nijnik M, Bradford K.  2019.  Can carbon accounting promote economic development in forest-dependent indigenous communities? Forest Policy and Economics. 100:68-74.
Nijnik M, Secco L, Miller DR, Melnykovych M.  2019.  Can social innovation make a difference to forest-dependent communities? Forest Policy and Economics. 100:207-213.
Garratt MPD, Potts SG, Banks G, Hawes C, Breeze TD, O'Connor RS, Carvell C.  2019.  Capacity and willingness of farmers and citizen scientists to monitor crop pollinators and pollination services. Global Ecology and Conservation. 20:ArticleNo.e00781.
Ovando P, Beguería S, Campos P.  2019.  Carbon sequestration or water yield? The effect of payments for ecosystem services on forest management decisions in Mediterranean forests Water Resources and Economics. 28:ArticleNo.100119.
Mori K, Beauvoit BP, Benoît B, Maxime C, Allwood JW, Deborde C, Maucourt M, Goodacre R, Cabasson C, Moing A et al..  2019.  Central metabolism Is tuned to the availability of oxygen in developing melon fruit. Frontiers in Plant Science. 10:ArticleNo.594.
Lees KJ, Clark JM, Quaife T, Khomik M, Artz RRE.  2019.  Changes in carbon flux and spectral reflectance of Sphagnum mosses as a result of simulated drought. Ecohydrology. 12:ArticleNo.e2123.
Wilson R, Hopkins J.  2019.  The changing shape of Scotland's digital divide. European Countryside. 11:563-583.
Coulter M, Büttner B, Hofmann K, Bayer M, Ramsay L, Schweizer G, Waugh R, Looseley ME, Avrova A.  2019.  Characterisation of barley resistance to rhynchosporium on chromosome 6HS. Theoretical and Applied Genetics. 132:1089-1107.
Alor N, Tierno R, Cooke DEL, de Galarreta JIR.  2019.  Characterisation of Phytophthora infestans isolates of potato crops from Spain. Potato Research. 62:453-463.
Volk H, Marton K, Flajsman M, Radisek S, Tian H, Hein I, Podlipnik C, Thomma BPHJ, Kosmelj K, Javornik B et al..  2019.  Chitin-binding protein of verticillium nonalfalfae disguises fungus from plant chitinases and suppresses chitin-triggered host immunity. Molecular Plant Microbe Interactions. 32:1378-1390.
Hayward NJ, McDougall GJ, Farag S, Allwood JW, Austin C, Campbell F, Horgan G, Ranawana V.  2019.  Cinnamon shows antidiabetic properties that are species-specific: effects on enzyme activity inhibition and starch digestion. Plant Foods for Human Nutrition. 74:544-552.
Pohle I, Helliwell RC, Aube C, Gibbs S, Spencer M, Spezia L.  2019.  Citizen science evidence from the past century shows that Scottish rivers are warming. Science of the Total Environment. 659:53-65.
Asseng S, Martre P, Maiorano A, Rotter RP, O'Leary GJ, Fitzgerald GJ, Girousse C, Motzo R, Giunta F, Babar MA et al..  2019.  Climate change impact and adaptation for wheat protein. Global Change Biology. 25:155-173.
Calixto CPG, Tzioutziou NA, James AB, Hornyik C, Guo WB, Zhang RX, Nimmo HG, Brown JWS.  2019.  Cold-dependent expression and alternative splicing of arabidopsis long non-coding RNAs. Frontiers in Plant Science. 10:ArticleNo.235.
Mitchell RJ, Bellamy PE, Ellis CJ, Hewison RL, Hodgetts NG, Iason GR, Littlewood NA, Newey S, Stockan JA, Taylor AFS.  2019.  Collapsing foundations: the ecology of the British oak, implications of its decline and mitigation options. Biological Conservation. 233:316-327.
Wang Y, Rashid MAR, Li XP, Yao CG, Lu LL, Bai JM, Li YS, Xu NS, Yang QF, Zhang LH et al..  2019.  Collection and evaluation of genetic diversity and population structure of potato landraces and varieties in China. Frontiers in Plant Science. 10:ArticleNo.139.
Hamilton CM, Black L, Oliveira S, Burrells A, Bartley PM, Melo RPB, Chianini F, Palarea-Albaladejo J, Innes EA, Kelly PJ et al..  2019.  Comparative virulence of Caribbean, Brazilian and European isolates of Toxoplasma gondii. Parasites and Vectors. 12:ArticleNo.104.
Darrier B, Russel J, Milner SG, Hedley PE, Shaw PD, Macaulay M, Ramsay LD, Halpin C, Mascher M, Fleury DL et al..  2019.  A comparison of mainstream genotyping platforms for the evaluation and use of barley genetic resources. Frontiers in Plant Science. 10:ArticleNo.544.
Laribi A, Shand CA, Wendler R, Mouhouche GB, Colinet G.  2019.  Concentrations and sources of Cd, Cr, Cu, Fe, Ni, Pb and Zn in soil of the Mitidja plain, Algeria. Toxicological and Environmental Chemistry. 101:59-74.
Cui S, Hough RL, Fu Q, Qi X, Liu D, Cooper P, Li P, Zhang Z.  2019.  Concentrations and uptake pathways of polychlorinated biphenyls from soil to grass. Ecotoxicology and Environmental Safety. 182:ArticleNo.109428.
Smith LA, Swain DL, Innocent GT, Nevison I, Hutchings MR.  2019.  Considering appropriate replication in the design of animal social network studies. Scientific Reports. 9:ArticleNo.7208.
Barantal S, Castagneyrol B, Durka W, Iason G, Morath S, Koricheva J.  2019.  Contrasting effects of tree species and genetic diversity on the leaf-miner communities associated with silver birch. Oecologia. 189:687-697.
Haugeneder A, Trinkl J, Hartl K, Hoffmann T, Allwood JW, Schwab W.  2019.  Correction to: answering biological questions by analysis of the strawberry metabolome (vol 14, 145, 2018). Metabolomics. 15:40.
Tarfasa S, Balana BB, Tefera T, Woldeamanuel T, Moges A, Dinato M, Black HIJ.  2019.  Corrigendum to Modeling smallholder farmers' preferences for soil management measures: a case study from South Ethiopia. [Ecol. Econ. 145 (2018), 410-419.]. Ecological Economics. 156:433.
McGregor DE, Palarea-Albaladjo J, dall PM, Hron K, Chastin SFM.  2019.  Cox regression survival analysis with compositional covariates: Application to modelling mortality risk from 24-h physical activity patterns. Statistical Methods in Medical Research. :ArticleNo.UNSP0962280219864125.
Paajanen P, Kettleborough G, Lopez-Girona E, Giolai M, Heavens D, Baker D, Lister A, Cugliandolo F, Wilde G, Hein I et al..  2019.  A critical comparison of technologies for a plant genome sequencing project. GigaScience. 8:ArticleNo.UNSPgiy163.
Polhill JG, Ge J, Hare M, Matthews KB, Gimona A, Salt D, Yeluripati J.  2019.  Crossing the chasm: A ‘tube-map’ for agent-based social simulation of policy scenarios in spatially-distributed systems. Geoinformatica. 23:169-199.
Schofield EJ, Rowntree JK, Paterson E, Brewer MJ, Price EAC, Brearley FQ, Brooker RW.  2019.  Cultivar differences and impact of plant-plant competition on temporal patterns of nitrogen and biomass accumulation. Frontiers in Plant Science. 10:ArticleNo.215.
Stutter MI, Kronvang B, Ó'Huallacháin D, Rozemeijer J.  2019.  Current insight into the effectiveness of riparian management, attainment of multiple benefits and potential technical enhancements. Journal of Environmental Quality. 48:236-247.
2018
Mládková P, Mládek J, Hejduk S, Hejcman M, Pakeman RJ.  2018.  Calcium plus magnesium indicates digestibility. Ecology Letters. 21:885-895.
Mladkova P, Mladek J, Hejduk S, Hejcman M, Pakeman RJ.  2018.  Calcium plus magnesium indicates digestibility: the significance of the second major axis of plant chemical variation for ecological processes. Ecology Letters. 21:885-895.
Chan FCC, Arain MA, Khomik M, Brodeur JJ, Peichl M, Restrepo-Coupe N, Thorne R, Beamesderfer E, McKenzie S, Xu B et al..  2018.  Carbon, water and energy exchange dynamics of a young pine plantation forest during the initial fourteen years of growth. Forest Ecology and Management. 410:12-26.
Lavoie M, Duval JFL, Raven JA, Maps F, Bejaoui B, Kieber DJ, Vincent WF.  2018.  Carbonate disequilibrium in the external boundary layer of freshwater chrysophytes: implications for contaminant uptake. Environmental Science and Technology. 52:9403-9411.
Hollaway MJ, Beven KJ, Benskin MWCH, Collins AL, Evans R, Falloon PD, Forber KJ, Hiscock KM, Kahana R, Macleod CJA et al..  2018.  The challenges of modelling phosphorus in a headwater catchment: Applying a ‘limits of acceptability’ uncertainty framework to a water quality model. Journal of Hydrology. 558:607-624.
Hollaway MJ, Beven KJ, Benskin MWCH, Collins AL, Evans R, Falloon PD, Forber KJ, Hiscock KM, Kahana R, Macleod CJA et al..  2018.  The challenges of modelling phosphorus in a headwater catchment: Applying a ‘limits of acceptability’ uncertainty framework to a water quality model. Journal of Hydrology. 558:607-624.
Bol R, Gruau G, Mellander PE, Dupas R, Bechmann M, Skarbøvik E, Bieroza M, Djodjic F, Glendell M, Jordan P et al..  2018.  Challenges of reducing phosphorus based water eutrophication in the agricultural landscapes of Northwest Europe. Frontiers in Marine Science. 5:ArticleNo.276.
Waylen KA, Holstead KL, Colley K, Hopkins J.  2018.  Challenges to enabling and implementing Natural Flood Management in Scotland. Journal of Flood Risk Management. 11:S1078-S1089.
Milligan G, Booth KE, Cox ES, Pakeman RJ, Le Duc MG, Connor L, Blackbird S, Marrs RH.  2018.  Change to ecosystem properties through changing the dominant species: impact of Pteridium aquilinum-control and heathland restoration treatments on selected soil properties. Journal of Environmental Management.
Free A, McDonald MA, Pagaling E.  2018.  Chapter 4 - Diversity-function relationships in natural, applied and engineered microbial ecosystems. Advances in Applied Microbiology. 105:131-189.
Birkel C, Helliwell RC, Thornton B, Gibbs S, Cooper P, Soulsby C, Tetzlaff D, Spezia L, Esquivel-Hernandez G, Sanchez-Murillo R et al..  2018.  Characterization of surface water isotope spatial patterns of Scotland. Journal of Geochemical Exploration. 194:71-80.
Kidwell J, Ginn F, Northcott M, Bomberg E, Hague A.  2018.  Christian climate care: Slow change, modesty and eco-theo-citizenship. Geo: Geography and Environment. 5:ArticleNo.e00059.
Arnold W, Ruf T, Loe LE, Irvine RJ, Ropstad E, Veiberg V, Albon SD.  2018.  Circadian rhythmicity persists through the Polar night and midnight sun in Svalbard reindeer. Scientific Reports. 8:ArticleNo.14466.
Fronzek S, Pirttioja N, Carter TR, Bindi M, Hoffmann H, Palosuo T, Ruiz-Ramos M, Tao F, Trnka M, Acutis M et al..  2018.  Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change. Agricultural Systems. 159:209-224.
Fronzek S, Pirttioja N, Carter TR, Bindi M, Hoffmann H, Palosuo T, Ruiz-Ramos M, Tao F, Trnka M, Acutis M et al..  2018.  Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change. Agricultural Systems. 159:209-224.
George TS, Taylor MA, Dodd IC, White PJ.  2018.  Climate change and consequences for potato production: a review of tolerance to emerging abiotic stress. Potato Research. 60:239-268.
Zhang L, Ding X, Peng Y, George TS, Feng G.  2018.  Closing the loop on phosphorus loss from intensive agricultural soil: a microbial immobilization solution? Frontiers in Microbiology. 9:ArticleNo.4..
Clarke HV, Foster SP, Oliphant L, Waters EW, Karley AJ.  2018.  Co-occurrence of defensive traits in the potato aphid Macrosiphum euphorbiae. Ecological Entomology. 43:538-542.
Correia B, Hancock RD, Amaral J, Gomez-Cadenas A, Valledor L, Pinto G.  2018.  Combined drought and heat activates protective responses in Eucalyptus globulus that are not activated when subjected to drought or heat stress alone. Frontiers in Plant Science. 9:ArticleNo.819.
Creamer E, Eadson W, van Veelen B, Pinker A, Tingey M, Braunholtz-Speight T, Markantoni M, Foden M, Lacey-Barnacle M.  2018.  Community energy: entanglements of community, state and private sectors. Geography Compass. 12:ArticleNo.e12378.
Iason GR, Taylor J, Helfer S.  2018.  Community-based biotic effects as determinants of tree resistance to pests and pathogens. Forest Ecology and Management. 417:301-312.
Schlautman B, Diaz-Garcia L, Covarrubias-Pazaran G, Schlautman N, Vorsa N, Polashock J, Ogden EL, Brown A, Lin YC, Bassil N et al..  2018.  Comparative genetic mapping reveals synteny and collinearity between the American cranberry and diploid blueberry genomes. Molecular Breeding. 38
Schlautman B, Diaz-Garcia L, Covarrubias-Pazaran G, Schlautman N, Vorsa N, Polashock J, Ogden EL, Brown A, Lin YC, Bassil N et al..  2018.  Comparative genetic mapping reveals synteny and collinearity between the American cranberry and diploid blueberry genomes. Molecular Breeding. 38:ArticleNo.9.
Casetou-Gustafsson S, Hillier S, Akselsson C, Simonsson M, Stendahl S, Olsson BA.  2018.  Comparison of measured (XRPD) and modeled (A2M) soil mineralogies: a study of some Swedish forest soils in the context of weathering rate predictions. Geoderma. 310:77-88.
Mustin K, Arroyo B, Beja P, Newey S, Irvine RJ, Kestler J, Redpath S.  2018.  Consequences of game bird management for non-game species in Europe. Journal of Applied Ecology. 55:2285-2295.
Herzig P, Maurer A, Draba V, Sharma R, Draicchio F, Bull H, Milne L, Thomas WTB, Flavell AJ, Pillen K.  2018.  Contrasting genetic regulation of plant development in wild barley grown in two European environments revealed by nested association mapping. Journal of Experimental Botany. 69:1517-1531.
Davis JL, Armengaud P, Larson TR, Graham IA, White PJ, Newton AC, Amtmann A.  2018.  Contrasting nutrient-disease relationships: Potassium gradients in barley leaves have opposite effects on two fungal pathogens with different sensitivities to jasmonic acid. Plant Cell and Environment. 41:2357-2372.
Tao FL, Rotter RP, Palosuo T, Diaz-Ambrona CGH, Minguez MI, Semenov MA, Kersebaum KC, Nendel C, Specka X, Hoffmann H et al..  2018.  Contribution of crop model structure, parameters and climate projections to uncertainty in climate change impact assessments. Global Change Biology. 24:1291-1307.
Tao FL, Rotter RP, Palosuo T, Diaz-Ambrona CGH, Minguez MI, Semenov MA, Kersebaum KC, Nendel C, Specka X, Hoffmann H et al..  2018.  Contribution of crop model structure, parameters and climate projections to uncertainty in climate change impact assessments. Global Change Biology. 24:1291-1307.
Raven JA, Lambers H, Smith SE, Westoby M.  2018.  Costs of acquiring phosphorus by vascular land plants: patterns and implications for plant coexistence. New Phytologist. 217:1420-1427.
Raven JA, Lambers H, Smith SE, Westoby M.  2018.  Costs of acquiring phosphorus by vascular land plants: patterns and implications for plant coexistence. New Phytologist. 217:1420-1427.
Pohle I, Niebisch M, Müller H, Schümberg S, Zha T, Maurer T, Hinz C.  2018.  Coupling poisson rectangular pulse and multiplicative microcanonical random cascade models to generate sub-daily precipitation timeseries. Journal of Hydrology. 562:50-70.
Brooker RW, Karley AJ, Morcillo L, Newton AC, Pakeman RJ, Schob C.  2018.  Crop presence, but not genetic diversity, impacts on the rare arable plant Valerianella rimosa. Plant Ecology and Diversity. 10:495-507.
Adams MA, Buchmann N, Sprent J, Buckley TN, Turnbull TL.  2018.  Crops, nitrogen, water: are legumes friend, foe, or misunderstood ally? Trends in Plant Science. 23:539-550.
2017
Colasuonno P, Lozito ML, Marcotuli I, Nigro D, Giancaspro A, Mangini G, De Vita P, Mastrangelo AM, Pecchioni N, Houston K et al..  2017.  The carotenoid biosynthetic and catabolic genes in wheat and their association with yellow pigments. BMC Genomics. 18:ArticleNo.122..
Eastwood A, Fischer A, Byg A.  2017.  The challenges of participatory and systemic environmental management: from aspiration to implementation. Journal of Environmental Planning and Management. 60:1683-1701.
Waylen KA, Holstead KL, Colley K, Hopkins J.  2017.  Challenges to enabling and implementing Natural Flood Management in Scotland. Journal of Flood Risk Management. Published online..
Rekad FZ, Cooke DEL, Puglisi I, Randall E, Guenaoui Y, Bouznad Z, Evoli M, Pane A, Schena L, Di San Lio GM et al..  2017.  Characterization of Phytophthora infestans populations in northwestern Algeria during 2008-2014. Fungal Biology. 121:467-477.
Raven J.  2017.  Chloride: essential micronutrient and multifunctional beneficial ion. Journal of Experimental Botany. 68:359-367.
Mascher M, Gundlach H, Himmelbach A, Beier S, Twardziok SO, Wicker T, Radchuk V, Dockter C, Hedley PE, Russell J et al..  2017.  A chromosome conformation capture ordered sequence of the barley genome. Nature. 544:427-433.
Mascher M, Gundlach H, Himmelbach A, Beier S, Twardziok SO, Wicker T, Radchuk V, Dockter C, Hedley PE, Russell J et al..  2017.  A chromosome conformation capture ordered sequence of the barley genome. Nature. 544:427-433.
Peeters B, Veiberg V, Pedersen AO, Stien A, Irvine RJ, Aanes R, S'Ther BE, Strand O, Hansen BB.  2017.  Climate and density dependence cause changes in adult sex ratio in a large Arctic herbivore. Ecosphere. 8:ArticleNo.e01699.
Britton AJ, Hester AJ, Hewison RL, Potts JM, Ross LC.  2017.  Climate, pollution and grazing drive long-term change in moorland habitats. Applied Vegetation Science. 20:194-203.
Brooker RW.  2017.  Clonal plants and facilitation research: bridging the gap. Folia Geobotanica.. 52:295-302.
Westerink J, Jongeneel R, Polman N, Prager K, Franks J, Dupraz P, Mettepenningen E.  2017.  Collaborative governance arrangements to deliver spatially coordinated agri-environmental management. Land Use Policy. 69:175-192.
Mwafulirwa LD, Baggs EM, Russell J, Morley N, Sim A, Paterson E.  2017.  Combined effects of rhizodeposit C and crop residues on SOM priming, residue mineralization and N supply in soil. Soil Biology and Biochemistry. 113:35-44.
Innocent GT, Gilbert L, Jones EO, McLeod JE, Gunn G, McKendrick IJ, Albon SD.  2017.  Combining slaughterhouse surveillance data with cattle tracing scheme and environmental data to quantify environmental risk factors for liver fluke in cattle. Frontiers in Veterinary Science. 4:ArticleNo.65.
Fischer A, Holstead K, Hendrickson CY, Virkkula O, Prampolini A.  2017.  Community-led initiatives' everyday politics for sustainability - conflicting rationalities and aspirations for change. Environment and Planning A. 49:1986-2006.
Berka AL, Harnmeijer J, Roberts D, Phimister E, Msika J.  2017.  A comparative analysis of the costs of onshore wind energy: Is there a case for community-specific policy support? Energy Policy. 106:394-403.
Yoshida Y, Koutsovoulos G, Laetsch DR, Stevens L, Kumar S, Horikawa DD, Ishino K, Komine S, Kunieda T, Tomita M et al..  2017.  Comparative genomics of the tardigrades Hypsibius dujardini and Ramazzottius varieornatus. PLoS Biology. 15:e2002266.
Castro AJ, Cuesta-Marcos A, Hayes PM, Locatelli A, Macaulay M, Mastandrea N, Silveira M, Thomas WTB, Viega L.  2017.  The completely additive effects of two barley phenology-related genes (eps2S and sdw1) are explained by specific effects at different periods within the crop growth cycle. Plant Breeding. 136:663-670.
Prentice JC, Marion G, Hutchings MR, McNeilly TN, Matthews L.  2017.  Complex responses to movement-based disease control: when livestock trading helps. Journal of the Royal Society Interface. 14:ArticleNo.20160531.
McDougall GJ, Allwood JW, Pereira-Caro G, Brown EM, Latimer C, Dobson G, Stewart D, Ternan NG, Lawther R, O'Connor G et al..  2017.  The composition of potentially bioactive triterpenoid glycosides in red raspberry is influenced by tissue, extraction procedure and genotype. Food and Function. 8:3469-3479.
Fyfe L, Okoro P, Paterson E, Coyle S, McDougall GJ.  2017.  Compositional analysis of Scottish honeys with antimicrobial activity against antibiotic-resistant bacteria reveals novel antimicrobial components. LWT - Food Science and Technology. 79:52-59.
Giles ME, Daniell TJ, Baggs EM.  2017.  Compound driven differences in N2 and N2O emission from soil; the role of substrate use efficiency and the microbial community. Soil Biology and Biochemistry.. 106:90-98.
Byg A, Martin-Ortega J, Glenk K, Novo-Nunez P.  2017.  Conservation in the face of ambivalent public perceptions - the case of peatlands as "the good, the bad and the ugly". Biological Conservation. 206:181-189.
Monniaux M, McKim SM, Cartolano M, Thevenon E, Parcy F, Tsiantis M, Hay A.  2017.  Conservation vs divergence in LEAFY and APETALA1 functions between Arabidopsis thaliana and Cardamine hirsuta. New Phytologist. 216:549-561.
Rigney B, Blok V, Griffin D, Dalton E, Milbourne D.  2017.  Consistent action of two partially effective loci conferring resistance to Globodera pallida Pa2/3 across multiple nematode field populations. Plant Pathology. 66:1031-1040.
Beier S, Himmelbach A, Colmsee C, Zhang XQ, Barrero RA, Zhang QS, Li L, Bayer M, Bolser D, Taudien S et al..  2017.  Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data. 4:ArticleNo.170044.
Beier S, Himmelbach A, Colmsee C, Zhang XQ, Barrero RA, Zhang QS, Li L, Bayer M, Bolser D, Taudien S et al..  2017.  Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data. 4:ArticleNo.170044.
Calladine J, Humphreys EM, Gilbert L, Furness RW, Robinson RA, Fuller RJ, Littlewood NA, Pakeman RJ, Ferguson J, Thompson C.  2017.  Continuing influences of introduced hedgehogs Erinaceus europaeus as a predator of wader (Charadrii) eggs four decades after their release on the Outer Hebrides, Scotland. Biological Invasions. 19:1981-1987.
Albon SD, Irvine RJ, Halvorsen O, Langvatn R, Loe LE, Ropstad E, Veiberg V, van der Wal R, Bjorkvoll EM, Duff EI et al..  2017.  Contrasting effects of summer and winter warming on body mass explain population dynamics in a food-limited Arctic herbivore. Global Change Biology. 23:1374-1389.
Boldrin D, Leung AK, Bengough AG.  2017.  Correlating hydrologic reinforcement of vegetated soil with plant traits during establishment of woody perennials. Plant and Soil. 416:437-451.
Prager K, Creaney R, Lorenzo-Arribas A.  2017.  Criteria for a system level evaluation of farm advisory services. Land Use Policy. 61:86-98.
Rathore R, Dowling DN, Forristal PD, Spink J, Cotter PD, Bulgarelli D, Germaine KJ.  2017.  Crop establishment practices are a driver of the plant microbiota in winter oilseed rape (Brassica napus). Frontiers in Microbiology. 8:ArticleNo.1489.
Maiorano A, Martre P, Asseng S, Ewert F, Muller C, Rotter RP, Ruane AC, Semenov MA, Wallach D, Wang EL et al..  2017.  Crop model improvement reduces the uncertainty of the response to temperature of multi-model ensembles. Field Crops Research. 202:5-20.
Maiorano A, Martre P, Asseng S, Ewert F, Muller C, Rotter RP, Ruane AC, Semenov MA, Wallach D, Wang EL et al..  2017.  Crop model improvement reduces the uncertainty of the response to temperature of multi-model ensembles. Field Crops Research. 202:5-20.
Bowler D, Hof C, Haase P, Kröncke I, Schweiger O, Adrian R, Baert L, Bauer HG, Blick T, Domisch S et al..  2017.  Cross-realm assessment of the impact of climate change on species’ abundance trends. Nature Ecology and Evolution. 1:ArticleNo.0067.
Bowler D, Hof C, Haase P, Kröncke I, Schweiger O, Adrian R, Baert L, Bauer HG, Blick T, Domisch S et al..  2017.  Cross-realm assessment of the impact of climate change on species’ abundance trends. Nature Ecology and Evolution. 1:ArticleNo.0067.
Kanvil S, Pham J, Lopez-Cobollo R, Selby M, Bennett M, Beckingham C, Powell G, Turnbull C.  2017.  Cucurbit extrafascicular phloem has strong negative impacts on aphids and is not a preferred feeding site. Plant Cell and Environment. 40:2780-2789.
Beardall J, Raven JA.  2017.  Cyanobacteria vs green algae: which group has the edge? Journal of Experimental Botany. 68:3697-3699.
2016
Love AJ, Yu CL, Petukhova NV, Kalinina NO, Chen JP, Taliansky ME.  2016.  Cajal bodies and their role in plant stress and disease responses. RNA Biology. 14:779-790.
Ockenden MC, Deasy CE, Benskin CMH, Beven KJ, Burke S, Collins AL, Evans R, Falloon PD, Forber KJ, Hiscock KM et al..  2016.  Changing climate and nutrient transfers: Evidence from high temporal resolution concentration-flow dynamics in headwater catchments. Science of the Total Environment. 548:325-339.
Alegria Terrazas R, Giles C, Paterson E, Robertson-Albertyn S, Cesco S, Mimmo T, Pii Y, Bulgarelli D.  2016.  Chapter one - Plant-microbiota interactions as a driver of the mineral turnover in the rhizosphere. Advances in Applied Microbiology. 95:1-67.
Pearson KA, Taylor AFS, Fuchs RME, Woodward S.  2016.  Characterisation and pathogenicity of Fusarium taxa isolated from ragwort (Jacobaea vulgaris) roots. Fungal Ecology. 20:186-192.
Salvadori C, Finlayson J, Trogu T, Formenti N, Lanfranchi P, Citterio C, Palarea-Albaladejo J, Poli A, Chianini F.  2016.  Characterization of immune system cell subsets in fixed tissues from alpine chamois (Rupicapra rupicapra). Journal of Comparative Pathology. 155:207-212.
Lemaire B, Van Cauwenberghe J, Verstraete B, Chimphango S, Stirton C, Honnay O, Smets E, Sprent JI, James EK, Muasya AM.  2016.  Characterization of the papilionoid-Burkholderia interaction in the Fynbos biome: the diversity and distribution of beta-rhizobia nodulating Podalyria calyptrata (Fabaceae, Podalyrieae). Systematic and Applied Microbiology. 39:41-48.
Swamy M, Beck-Garcia K, Beck-Garcia E, Hartl FA, Morath A, Yousefi OS, Pashupati Dopfer E, Molnar E, Schulze AK, Blanco R et al..  2016.  A cholesterol-based allostery model of T cell receptor phosphorylation. Immunity. 44:1091-1101.
Mahlmann RF, Gilg HA, Hillier S, Galan E.  2016.  Clay mineral indices in palaeo-geothermal and hydrothermal studies. Applied Clay Science.
Bainbridge Z, Lewis S, Smithers S, Wilkinson S, Douglas G, Hillier S, Brodie J.  2016.  Clay mineral source tracing and characterisation of Burdekin River (NE Australia) and flood plume fine sediment. Journal of Soils and Sediments. 16:687-706.
Hamel S, Gaillard JM, Yoccoz NG, Albon S, Cote SD, Craine JM, Festa-Bianchet M, Garel M, Lee P, Moss C et al..  2016.  Cohort variation in individual body mass dissipates with age in large herbivores. Ecological Monographs. 86:517-543.
Hamel S, Gillard JM, Yoccoz N, Albon SD, Cote SD, Craine JM, Festa-Blanchet M, Garel M, Lee P, Moss C et al..  2016.  Cohort variation in individual body mass dissipates with age in large herbivores. Ecological Monographs. 86:517-543.
Nimegeer A, Farmer J, Munoz SA, Currie M.  2016.  Community participation for rural healthcare design: description and critique of a method. Health and Social Care in the Community. 24:175-183.
Iannetta PPM, Young M, Bachinger J, Bergkvist G, Lopez-Bellido RJ, Monti M, Pappa VA, Reckling M, Topp CFE, Walker RL et al..  2016.  A comparative nitrogen balance and productivity analysis of legume and non-legume supported cropping systems: the potential role of biological nitrogen fixation. Frontiers in Plant Science. 7:ArticleNo.1700..
McGavin W, MacFarlane SA.  2016.  The complete nucleotide sequence of Pelargonium leaf curl virus. Archives of Virology. 161:1415-1417.
Pongrac P, Potisek M, Fras A, Likar M, Budic B, Myszka K, Boros D, Necemer M, Kelemen M, Vavpetic P et al..  2016.  Composition of mineral elements and bioactive compounds in tartary buckwheat and wheat sprouts as affected by natural mineral-rich water. Journal of Cereal Science. 69:9-16.
Lin H, Jin DF, Freitag TE, Sun WC, Yu QG, Fu JR, Ma JW.  2016.  A compositional shift in the soil microbiome induced by tetracycline, sulfamonomethoxine and ciprofloxacin entering a plant-soil system. Environmental Pollution. 212:440-448.
McCallum S, Graham J, Jorgensen A, Rowland LJ, Bassil NV, Hancock JF, Wheeler EJ, Vining K, Poland JA, Olmstead JW et al..  2016.  Construction of a SNP and SSR linkage map in autotetraploid blueberry using genotyping by sequencing. Molecular Breeding. 36:ArticleNo.4.
Albon SD, Irvine RJ, Halvorsen O, Langvatn R, Loe LE, Ropstad E, Veiberg V, van der Wal R, Bjorkvoll EM, Duff EI et al..  2016.  Contrasting effects of summer and winter warming on body mass explain population dynamics in a food-limited Arctic herbivore. Global Change Biology. Published online..
Cardenas LM, Collins AL, Dungait JAJ, Hawkins J, Chabbi A, Hawes C.  2016.  The contribution of farm-scale experiments to the understanding of soil processes and implications for ecosystem services. Guest Editors' introduction. European Journal of Soil Science. 67:359.
Fischer A, Eastwood A.  2016.  Coproduction of ecosystem services as human-nature interactions - an analytical framework. Land Use Policy. 52:41-50.
Hillier S, Brydson R, Delbos E, Fraser T, Gray N, Pendlowski H, Phillips I, Robertson J, Wilson I.  2016.  Correlations among the mineralogical and physical properties of hallyosite nanotubes (HNTs). Clay Minerals. 51:325-350.
Crozier L, Hedley PE, Morris J, Wagstaff C, Andrews SC, Toth I, Jackson RW, Holden N.  2016.  Corrigendum: whole-transcriptome analysis of verocytotoxigenic Escherichia coli O157:H7 (Sakai) suggests plant-species-specific metabolic responses on exposure to spinach and lettuce extracts. Frontiers in Microbiology.. 7
Foyer CH, Rasool B, Davey JW, Hancock RD.  2016.  Cross tolerance to biotic and abiotic stresses in plants: a focus on resistance to aphid infestation. Journal of Experimental Biology. 67:2025-2037.
Zhang YL, Rataj K, Simpson GG, Tong L.  2016.  Crystal structure of the SPOC domain of the arabidopsis flowering regulator FPA. PLoS ONE. 11:ArticleNo.e0160694.
2015
Yao HY, Chapman SJ, Thornton B, Paterson E.  2015.  C-13 PLFAs: a key to open the soil microbial black box? Plant and Soil. 392:3-15.
Puga AP, Abreu CA, Melo LCA, Paz-Ferreiro J, Beesley L.  2015.  Cadmium, lead, and zinc mobility and plant uptake in a mine soil amended with sugarcane straw biochar. Environmental Science and Pollution Research. 22:17606-17614.
Wiesel L, Dubchak S, Turnau K, Broadley MR, White PJ.  2015.  Caesium inhibits the colonization of Medicago truncatula by arbuscular mycorrhizal fungi. Journal of Environmental Radioactivity. 141:57-61.
Quin S, Artz RRE, Coupar AM, Woodin SJ.  2015.  Calluna vulgaris-dominated upland heathland sequesters more CO2 annually than grass-dominated upland heathland. Science of the Total Environment.. 505:740-747.
Christen B, Kjeldsen C, Dalgaard T, Martin-Ortega J.  2015.  Can fuzzy cognitive mapping help in agricultural policy design and communication? Land Use Policy. 45:64-75.
Madigan A, Belka M, Taylor AFS, Kirisits T, Cleary M, Nguyen D, Elfstrand M, Woodward S.  2015.  Can Hymenoscyphus fraxineus infect hardy members of the Oleaceae other than ash species? Forest Pathology. 45:426-429.
Quilliam RS, van Niekerk MA, Chadwick DR, Cross P, Hanley N, Jones DL, Vinten AJA, Olivers DM.  2015.  Can macrophyte harvesting from eutrophic water close the loop on nutrient loss from agricultural land? Journal of Environmental Management. 152:210-217.
Duckett D, Wynne B, Christley RM, Heathwaite AL, Mort M, Austin Z, Wastling JM, Latham SM, Alcock R, Haygarth P.  2015.  Can policy be risk-based? The cultural theory of risk and the case of livestock disease containment Sociologia Ruralis. 55:379-399.
Waylen KA, Martin-Ortega J, Blackstock KL, Brown I, Uribe BEA, Hernández SB, Bertoni MB, Bustos ML, Bayer AXC, Semerena RIE et al..  2015.  Can scenario-planning support community based natural resource management? Experiences from three countries in Latin America Ecology and Society. 20:ArticleNo.28.
Evans DM, Villar N, Littlewood NA, Pakeman RJ, Evans SA, Dennis P, Skartveit J, Redpath SM.  2015.  The cascading impacts of livestock grazing in upland ecosystems: a 10 year experiment. Ecosphere. 6:ArticleNo.42..
Specht A, Gordon IJ, Groves RH, Lambers H, Phinn SR.  2015.  Catalysing transdisciplinary synthesis in ecosystem science and management. Science of the Total Environment. 534:1-3.
Downie HF, Adu MO, Schmidt S, Otten W, Dupuy LX, White PJ, Valentine TA.  2015.  Challenges and opportunities for quantifying roots and rhizosphere interactions through imaging and image analysis. Plant, Cell and Environment. 38:1213-1232.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.