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Senior JK, Iason GR, Gundale M, Whitham TG, Axelsson EP.  2019.  Genetic increases in growth do not lead to trade-offs with ecologically important litter and fine root traits in Norway spruce. Forest Ecology and Management. 446:54-62.
Tomaszewski C, Byrne S, Foito A, Kildea S, Kopecky D, Dolezel J, Heslop-Harrison JS, Stewart D, Barth S.  2012.  Genetic linkage mapping in an F2 perennial ryegrass population saturated with DArT markers. Plant Breeding. 131:345-349.
Massa AN, Manrique-Carpintero NC, Coombs JJ, Zarka DG, Boone AE, Kirk WW, Hackett CA, Bryan GJ, Douches DS.  2015.  Genetic linkage mapping of economically important traits in cultivated tetraploid potato (Solanum tuberosum L.). G3-Genes Genomes Genetics. 5:2357-2364.
Looseley ME, Keith R, Guy D, Barral-Baron G, Thirugnanasambandam A, Harrap D, Werner P, Newton AC.  2014.  Genetic mapping of resistance to Rhynchosporium commune and characterisation of early infection in a winter barley mapping population. Euphytica. Published online.
Looseley ME, Keith R, Guy D, Barral-Baron G, Thirugnanasambandam A, Harrap D, Werner P, Newton AC.  2015.  Genetic mapping of resistance to Rhynchosporium commune and characterisation of early infection in a winter barley mapping population. Euphytica. 203:337-347.
Bradshaw JE.  2009.  A genetic perspective on yield plateau in potato (Review). Potato Journal (Indian). 36:79-94.
M C, Crosley LK, Nicol F, Beckett GJ, Howie AF, Hill KE, Horgan GW, Mathers JC, Arthur JR, Hesketh JE.  2007.  Genetic polymorphisms in the human selenoprotein P gene determine the response of selenoprotein markers to selenium supplementation in a gender-specific manner (the SELGEN study). FASEB Journal. 21:3063-3074. Abstract
Denoys-Rothan B, Chartier P, Petit A, Gordon S, Graham J, Dolan A, Hofer M, Faedi W, Malteni M, Baruzzi G et al..  2008.  Genetic resource of European small berries according to Genberry. Sodinninkyste ir Darzininkyste. 27:371-377.
Liu HJ, Sandal N, Andersen KR, James EK, Stougaard J, Kelly S, Kawaharada Y.  2018.  A genetic screen for plant mutants with altered nodulation phenotypes in response to rhizobial glycan mutants. New Phytologist. 220:526-538.
Begg GS, Wishart J, Young MW, Squire GR, Iannetta PPM.  2012.  Genetic structure among arable populations of Capsella bursa-pastoris L. is linked to functional traits and in-field conditions. Ecography. 35:446-457.
Obert B, Middlefell-Williams J, Millam S.  2008.  Genetic transformation of barley microspores using anther bombardment. Biotechnology Letters. 30:945-949. Abstract
Sait M, Clark EM, Wheelhouse N, Spalding L, Livingstone M, Sachse K, Markey BK, Magnino S, Siarkou VI, Vretou E et al..  2011.  Genetic variability of Chlamydophila abortus strains assessed by PCR-RFLP analysis of polymorphic membrane protein-encoding genes. Veterinary Microbiology. 151:284-290.
Lin G, Ci HX, Thirgood, S.J.; Redpath S, Zhang TZ, Su JP.  2010.  Genetic variation and molecular evolution of endangered Kozlov's pika (Ochotona Koslowi Buchner) based on mitochondrial cytochrome B gene. Polish Journal of Ecology. 58(3):563-568.
Graham NS, Hammond JP, Lysenko A, Mayes S, O'Lochlainn S, Blasco B, Bowen HC, Rawlings CJ, Rios JJ, Welham S et al..  2014.  Genetical and comparative genomics of Brassica under altered Ca supply identifies Arabidopsis Ca-transporter orthologs. The Plant Cell. 26:2818-2830.
Hopkins DW, Webster EA, Boerjan W, Pilate G, Halpin C.  2007.  Genetically modified lignin belowground. Nature Biotechnology. 25:168-169. Abstract
Love AJ, Makarov VV, Sinitsyna OV, Shaw J, Yaminsky IV, Kalinina NO, Taliansky ME.  2015.  A genetically modified tobacco mosaic virus that can produce gold nanoparticles from a metal salt precursor. Frontiers in Plant Science. 6
MacFarlane SA, McGavin WJ.  2009.  Genome activation by Raspberry bushy dwarf virus coat protein. Journal of General Virology. 90:747-753.
Cooke DEL, Cano LM, Raffaele S, Bain RA, Cooke LR, Etherington GJ, Deahl KL, Farrer RA, Gilroy EM, Goss EM et al..  2012.  Genome analyses of an aggressive and invasive lineage of the Irish potato famine pathogen. PLoS Pathogens. 8:e1002940.
Vicente CSL, Nascimento FX, Ikuyo Y, Cock PJA, Mota M, Hasegawa K.  2016.  The genome and genetics of a high oxidative stress tolerant Serratia sp LCN16 isolated from the plant parasitic nematode Bursaphelenchus xylophilus. BMC Genomics. 17:ArticleNo.301.
Cotton JA, Lilley CJ, Jones LM, Kikuchi T, Reid AJ, Thorpe P, Tsai IJ, Beasley H, Blok VC, Cock PJA et al..  2014.  The genome and life-stage specific transcriptomes of Globodera pallida elucidate key aspects of plant parasitism by a cyst nematode. Genome Biology. 15
Das Dangol S, Barakate A, Stephens J, Caliskan ME, Bakhsh A.  2019.  Genome editing of potato using CRISPR technologies: current development and future prospective. Plant Cell, Tissue and Organ Culture. 139:403-416.
Kikuchi T, Eves-van den Akker S, Jones JT.  2017.  Genome evolution of plant-parasitic nematodes. Annual Review of Phytopathology. 55:333-354.
Eves-van den Akker S, Laetsch DR, Thorpe P, Lilley CJ, Danchin EGJ, Da Rocha M, Rancurel C, Holroyd NE, Cotton JA, Szitenberg A et al..  2016.  The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence. Genome Biology. 17
Haas BJ, Kamoun S, Zody MC, Jiang RHY, Handsaker RE, Cano LM, Grabherr M, Kodira CD, Raffaele S, Torto-Alalibo T et al..  2009.  Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature. 461:393-398.
Xu X, Pan SK, Cheng SF, Zhang B, Mu DS, Ni PX, Zhang GY, Yang S, Li RQ, Wang J et al..  2011.  Genome sequence and analysis of the tuber crop potato. Nature. 475:189-195.
De Maayer P, Chan WY, Venter SN, Toth IK, Birch PRJ, Joubert F, Coutinho TA.  2010.  Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback. Journal of Bacteriology. 192:2936-2937.
Abad P, Gouzy J, Aury JM, Castagnone-Sereno P, Danchin EGJ, Deleury E, Perfus-Barbeoch L, Anthouard V, Artiguenave F, Blok VC et al..  2008.  Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. Nature Biotechnology. 26:909-915.
Richards S, Gibbs RA, Gerardo NM, Moran N, Nakabachi A, Stern D, Tagu D, Wilson ACC, Muzny D, Kovar C et al..  2010.  Genome sequence of the pea aphid Acyrthosiphon pisum. PLOS Biology. 8:-e1000313.
Glasner JD, Yang C, Reverchon S, Hugouvieux-Cotte-Pattat N, Condemine G, Bohin JP, Van GF, Yang S, Franza T, Expert D et al..  2011.  Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937. Journal of Bacteriology. 193:2076-2077.
Vetukuri RR, Kushwaha S, Sen D, Whisson SC, Lamour KH, Grenville-Briggs L.  2018.  Genome sequence resource for the oomycete taro pathogen Phytophthora colocasiae. Molecular Plant-Microbe Interactions. 31:903-905.
Lamour KH, Mudge J, Gobena D, Hurtado-Gonzales OP, Schmutz J, Kuo A, Miller NA, Rice BJ, Raffaele S, Cano LM et al..  2012.  Genome sequencing and mapping reveal loss of heterozygosity as a mechanism for rapid adaptation in the vegetable pathogen phytophthora capsici. Molecular Plant-Microbe Interactions. 25:1350-1360.
Marcotuli I, Houston K, Waugh R, Fincher GB, Burton RA, Blanco A, Gadaleta A.  2015.  Genome wide association mapping for Arabinoxylan content in a collection of tetraploid wheats. PLoS ONE. 10:e0132787.
Houston K, Russell J, Schreiber M, Halpin C, Oakey H, Washington JM, Booth A, Shirley N, Burton RA, Fincher GB et al..  2014.  A genome wide association scan for (1,3;1,4)-beta-glucan content in the grain of contemporary 2-row Spring and Winter barleys. BMC Genomics. 15
Hassan AS, Houston K, Lahnstein J, Shirley N, Schwerdt JG, Gidley MJ, Waugh R, Little A, Burton RA.  2017.  A genome wide association study of arabinoxylan content in 2-row spring barley grain. PLoS ONE. 12:e0182537.
Rostoks N, Mudie S, Cardle L, Russell JR, Ramsay L, Booth A, Svensson JT, Wanamaker SI, Walia H, Rodriguez EM et al..  2005.  Genome wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics. 274:515-527springerlink.com/content/7625g78880706u6m/fulltext.pdf. Abstract
Ho T, Cardle L, Xu X, Bayer M, Prince SJ, Mutava RN, Marshall DF, Syed NH.  2014.  Genome-Tagged Amplification (GTA): a PCR-based method to prepare sample-tagged amplicons from hundreds of individuals for next generation sequencing. Molecular Breeding. 34:977-988.
Rio-Alvarez I, Rodriguez-Herva JJ, Cuartas-Lanza R, Toth IK, Pritchard L, Rodriguez-Palenzuela P, Lopez-Solanilla E.  2012.  Genome-wide analysis of the response of Dickeya dadantii 3937 to plant antimicrobial peptides. Molecular Plant-Microbe Interactions. 25:523-533.
Xu X, Sharma R, Tondelli A, Russell J, Comadran J, Schnaithmann F, Pillen K, Kilian B, Cattivelli L, Thomas WTB et al..  2018.  Genome-wide association analysis of grain yield-associated traits in a Pan-European barley cultivar collection. Plant Genome. 11:ArticleNo.UNSP170073.
Abdel-Ghani AH, Sharma R, Wabila C, Dhanagond S, Owais SJ, Duwayri MA, Al-Dalain SA, Klukas C, Chen D, Lübberstedt T et al..  2019.  Genome-wide association mapping in a diverse spring barley collection reveals the presence of QTL hotspots and candidate genes for root and shoot architecture traits at seedling stage. BMC Plant Biology. 18:ArticleNo216.
Wang M, Jiang N, Jia T, Leach L, Cockram J, Waugh R, Ramsay L, Thomas WTB, Luo Z.  2012.  Genome-wide association mapping of agronomic and morphologic traits in highly structured populations of barley cultivars. Theoretical and Applied Genetics. 124:233-246.
Visioni A, Tondelli A, Francia E, Pswarayi A, Malosetti M, Russell J, Thomas W, Waugh R, Pecchioni N, Romagosa I et al..  2013.  Genome-wide association mapping of frost tolerance in barley (Hordeum vulgare L.). BMC Genomics. 14:424.
Cockram J, White J, Zuluaga D, Smith D, Comadran J, Macaulay M, Luo ZW, Kearsey MJ, Werner P, Harrap D et al..  2010.  Genome-wide association mapping of morphological traits to candidate gene resolution in the un-sequenced barley genome. Proceedings of the National Academy of Sciences, USA. 107:21611-21616.
Sharma R, Draicchio F, Bull H, Herzig P, Maurer A, Pillen K, Thomas WTB, Flavell AJ.  2018.  Genome-wide association of yield traits in a nested association mapping population of barley reveals new gene diversity for future breeding. Authors. Journal of Experimental Botany. 69:3811-3822.
Houston K, Burton RA, Sznajder B, Rafalski AJ, Dhugga KS, Mather DE, Taylor J, Steffenson BJ, Waugh R, Fincher GB.  2015.  A genome-wide association study for culm cellulose content in barley reveals candidate genes co-expressed with members of the cellulose synthase a gene family. PLoS ONE. 10:e0130890.
Wang DP, Qi MS, Calla B, Korban SS, Clough SJ, Cock PJA, Sundin GW, Toth IK, Zhao YF.  2012.  Genome-wide identification of genes regulated by the Rcs phosphorelay system in Erwinia amylovora. Molecular Plant-Microbe Interactions. 25:6-17.
Yang S, Peng Q, Zhang Q, Zou L, Li Y, Robert C, Pritchard L, Liu H, Hovey R, Wang Q et al..  2010.  Genome-wide identifiction of HrpL-regulated genes in the necrotrophic phytopathogen Dickeya dadantii 3937. PLoS One. 5:-e13472.
Campbell R, Pont SDA, Morris JA, McKenzie G, Sharma SK, Hedley PE, Ramsay G, Bryan GJ, Taylor MA.  2014.  Genome-wide QTL and bulked transcriptomic analysis reveals new candidate genes for the control of tuber carotenoid content in potato (Solanum tuberosum L.). Theoretical and Applied Genetics. 127:1917-1933.

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