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2022
Wen Z, White PJ, Shen J, Lambers H.  2022.  Linking root exudation to belowground economic traits for resource acquisition. New Phytologist 233: 1620-1635. (doi: 10.1111/nph.17854).
2021
Holland JE, White PJ, Thauvin JN, Jordan-Meille L, Haefele SM, Thomas CL, Goulding KWT, McGrath SP.  2021.  Liming impacts barley yield over a wide concentration range of soil exchangeable cations. Nutrient Cycling in Agroecosystems. Published online..
2020
Zimova M, Giery ST, Newey S, Nowak JJ, Spencer M, Mills LS.  2020.  Lack of phenological shift leads to increased camouflage mismatch in mountain hares. Proceedings of the Royal Society B: Biological Sciences. 287:ArticleNo.20201786.
Preedy K, Chaplain M, Leybourne D, Marion G, Karley AJ.  2020.  Learning-induced switching costs in a parasitoid can maintain diversity of host aphid phenotypes although biocontrol is destabilised under abiotic stress. Journal of Animal Ecology.. 89:1216-1229.
Poggio L, Gimona A, Aalders IH, Morrice J, Hough RL.  2020.  Legacy data for 3D modelling of peat properties with uncertainty estimation in Dava bog - Scotland.using legacy data. Geoderma Regional. 22:ArticleNo.e00288.
Okamoto H, Ducreux LJM, Allwood JW, Hedley PE, Wright A, Gururajan V, Terry MJ, Taylor MA.  2020.  Light regulation of chlorophyll and glycoalkaloid biosynthesis during tuber greening of potato S. tuberosum. Frontiers in Plant Science. 11:ArticleNo.753.
Cui S, Zhang ZL, Fu Q, Hough RL, Yates K, Osprey M, Yakowa G, Coull M.  2020.  Long-term spatial and temporal patterns of polycyclic aromatic hydrocarbons (PAHs) in Scottish soils over 20 years (1990-2009): a national picture. Geoderma. 361:ArticleNo.114135.
Song S, Gibson D, Ahmadzadeh S, Chu HO, Warden B, Overend R, Macfarlane F, Murray P, Marshall S, Aitkenhead MJ et al..  2020.  Low-cost hyperspectral imaging system using a linear variable bandpass filter for agritech applications. Applied Optics. 59:A167-A1754.
2019
Vorstius C, Rowan JS, Brown I, Frogbrook Z, Palarea-Albaladejo J.  2019.  Large-scale risk screening of raw water quality in the context of drinking water catchments and integrated response strategies. Environmental Science and Policy. 100:84-93.
Hu W, Ren T, Meng FJ, Cong RH, Li XK, White PJ, Lu JW.  2019.  Leaf photosynthetic capacity is regulated by the interaction of nitrogen and potassium through coordination of CO2 diffusion and carboxylation. Physiologia Plantarum. 167:418-432.
Godoy Herz MA, Kubaczka MG, Brzyzek G, Servi L, Krzyszton M, Simpson C, Brown J, Swiezewski S, Petrillo E, Kornblihtt AR.  2019.  Light regulates plant alternative splicing through the control of transcriptional elongation. Molecular Cell. 73:1066-1074.e3.
Halpin C.  2019.  Lignin engineering to improve saccharification and digestibility in grasses. Current Opinion in Biotechnology. 56:223-229.
Koehler MC, Stüeken, E.E, Hillier S, Prave T.  2019.  Limitation of fixed nitrogen and deepening of the carbonate-compensation depth through the Hirnantian at Dob’s Linn Scotland. Palaeogeography, Palaeoclimatology, Palaeoecology. 534:Articleno.109321..
Wang J, Chapman SJ, Ye Q, Yao H.  2019.  Limited effect of planting transgenic rice on the soil microbiome studied by continuous (CO2)-C-13 labeling combined with high-throughput sequencing. Applied Microbiology and Biotechnology. 103:4217-4227.
Slater JM, Gilbert L, Johnson D, Karley AJ.  2019.  Limited effects of the maternal rearing environment on the behaviour and fitness of an insect herbivore and its natural enemy. PLoS ONE. 14:ArticleNo.e0209965.
Pakeman RJ, Fielding DA, Everts L, Littlewood NA.  2019.  Long term impacts of changed grazing regimes on the vegetation of heterogeneous upland grasslands. Journal of Applied Ecology. 56:1794-1805.
Filis P, Walker N, Robertson L, Eaton-Turner E, Ramona L, Bellingham M, Amezaga MR, Mandon-Pepin B, Evans NP, Sharpe RM et al..  2019.  Long-term exposure to chemicals in sewage sludge fertilizer alters liver lipid content in females and cancer marker expression in males. Environment International. 124:98-108.
Hester AJ, Britton AJ, Hewison RL, Ross L, Potts J.  2019.  Long-term vegetation change in Scotland's native forests. Biological Conservation. 235:136-146.
2018
Millins C, Dickinson ER, Isakovic P, Gilbert L, Wojciechowska A, Paterson V, Tao F, Jahn M, Kilbride E, Birtles R et al..  2018.  Landscape structure affects the prevalence and distribution of a tick-borne zoonotic pathogen. Parasites and Vectors. 11:ArticleNo.621.
Dey T, Saville A, Myers K, Tewari S, Cooke DEL, Tripathy S, Fry WE, Ristaino JB, Guha Roy S.  2018.  Large sub-clonal variation in Phytophthora infestans from recent severe late blight epidemics in India. Scientific Reports. 8:ArticleNo.4429.
Schultz L, West S, Juarez Bourke A, d'Armengol L, Torrents P, Hardardottir H, Jansson A, Mohedano Roldan A.  2018.  Learning to live with social-ecological complexity: An interpretive analysis of learning in 11 UNESCO Biosphere Reserves. Global Environmental Change. 50:75-87.
Holland JE, Bennett AE, Newton AC, White PJ, McKenzie BM, George TS, Pakeman RJ, Bailey JS, Fornara DA, Hayes RC.  2018.  Liming impacts on soils, crops and biodiversity in the UK: a review. Science of the Total Environment. 610-611:316-332.
White PJ, Broadley MR, El-Serehy HA, George TS, Neugebauer K.  2018.  Linear relationships between shoot magnesium and calcium concentrations among angiosperm species are associated with cell wall chemistry. Annals of Botany. 122:221-226.
Sharma SK, MacKenzie K, McLean K, Dale F, Daniels S, Bryan GJ.  2018.  Linkage disequilibrium and evaluation of genome-wide association mapping models in tetraploid potato. G3: Genes, Genomes, Genetics, 8.. 8
Sharma SK, MacKenzie K, McLean K, Dale F, Daniels S, Bryan GJ.  2018.  Linkage disequilibrium and evaluation of genome-wide association mapping models in tetraploid potato. G3: Genes, Genomes, Genetics, 8.. 8:3185-3202.
Sutherland LA, Huttunen S.  2018.  Linking practices of multifunctional forestry to policy objectives: case studies in Finland and the UK. Forest Policy and Economics. 86:35-44.
Carlsson AM, Albon SD, Coulson SJ, Ropstad E, Stien A, Wilson K, Loe LE, Veiberg V, Irvine RJ.  2018.  Little impact of over-winter parasitism on a free-ranging ungulate in the high Arctic. Functional Ecology. 32:1046-1056.
Larkum AWD, Ritchie RJ, Raven JA.  2018.  Living off the Sun: chlorophylls, bacteriochlorophylls and rhodopsins. Photosynthetica. 56:11-43.
Kim M, Brodersen KE, Szabo M, Larkum AWD, Raven JA, Ralph PJ, Pernice M.  2018.  Low oxygen affects photophysiology and the level of expression of two-carbon metabolism genes in the seagrass Zostera muelleri. Photosynthesis Research. 136:147-160.
Fuechtbauer W, Yunusov T, Bozsoki Z, Gavrin A, James EK, Stougaard J, Schornack S, Radutoiu S.  2018.  LYS12 LysM receptor decelerates Phytophthora palmivora disease progression in Lotus japonicus. Plant Journal. 93:297-310.
2017
Smart SM, Glanville HC, Blanes MD, Mercado LM, Emmett BA, Jones DL, Cosby BJ, Marrs RH, Butler A, Marshall MR et al..  2017.  Leaf dry matter content is better at predicting above-ground net primary production than specific leaf area. Functional Ecology. 31:1336-1344.
Bryan GJ, McLean K, Waugh R, Spooner DM.  2017.  Levels of intra-specific AFLP diversity in tuber-bearing potato species with different breeding systems and ploidy Llevels. Frontiers in Genetics. 8:ArticleNo.119.
Raven JA, Colmer TD.  2017.  Life at the boundary: photosynthesis at the soil-fluid interface. A synthesis focusing on mosses (vol 67, page 1613, 2016). Correction. Journal of Experimental Botany. 68:5247.
Pakeman RJ, Hewison RL, Lewis RJ.  2017.  Linking functional traits and species preferences to species’ abundance and occupancy trends through time to identify habitat changes in coastal ecosystems. Perspectives in Plant Ecology, Evolution and Systematics. 27:35-44.
Giles CD, George TS, Brown LK, Mezeli M, Shand CA, Richardson AE, Mackay R, Wendler R, Darch T, Menezes-Blackburn D et al..  2017.  Linking the depletion of rhizosphere phosphorus to the heterologous expression of a fungal phytase in Nicotiana tabacum as revealed by enzyme-labile P and solution 31 P NMR spectroscopy. Rhizosphere. 3:82-91.
Pakeman RJ, Hewison RL, Riach D, Fisher J, Hurskianen S, Fielding D, Mitchell RJ.  2017.  Long-term functional structure and functional diversity changes in Scottish grasslands. Agriculture, Ecosystems and Environment. 247:352-362.
Tipping EW, Davies J, Henrys PA, Kirk G, Lilly A, Dragosits U, Carnell EJ, Dore A, Sutton M, Tomlinson SJ.  2017.  Long-term increases in soil carbon due to ecosystem fertilization by atmospheric nitrogen deposition demonstrated by regional-scale modelling and observations. Scientific Reports. 7:ArticleNo.1890.
Pakeman RJ, Hewison RL, Riach D, Fisher J, Hurskianen S, Fielding D, Mitchell RJ.  2017.  Long-term structural and functional diversity changes in Scottish grasslands. Agriculture, Ecosystems and Environment. 247:352-362.
2016
Delgado-Baquerizo M, Giaramida L, Reich PB, Khachane AN, Hamonts K, Edwards C, Lawton LA, Singh BK.  2016.  Lack of functional redundancy in the relationship between microbial diversity and ecosystem functioning. Journal of Ecology. 104:936-946.
Zhou JG, Haygarth PM, Withers PJA, Macleod CJA, Falloon PD, Beven KJ, Ockenden MC, Forber KJ, Hollaway MJ, Evans R et al..  2016.  Lattice Boltzmann method for the fractional advection-diffusion equation. Physical Review E. 93:ArticleNo.043310.
Adams MA, Turnbull TL, Sprent JI, Buchmann N.  2016.  Legumes are different: Leaf nitrogen, photosynthesis, and water use efficiency. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 113:4098-4103.
Raven JA, Colmer TD.  2016.  Life at the boundary: photosynthesis at the soil-fluid interface. A synthesis focusing on mosses. Journal of Experimental Botany. 67:1613-1623.
Brown E, Gill C, Stewart D, McDougall G.  2016.  Lingonberries (Vaccinium vitis-idaea L) and blueberries (Vaccinium corymbosum) contain discrete epicatechin anthocyanin derivatives linked by ethyl bridges. Journal of Berry Research. 6:13-23.
Pozsgai G, Baird J, Littlewood NA, Pakeman RJ, Young M.  2016.  Long-term changes in ground beetle (Coleoptera: Carabidae) assemblages in Scotland. Ecological Entomology. 41:157-167.
Pakeman RJ, Alexander J, Brooker R, Cummins R, Fielding D, Gore S, Hewison R, Mitchell R, Moore E, Erford K et al..  2016.  Long-term impacts of nitrogen deposition on coastal plant communities. Environmental Pollution. 221:337-347.
Schillereff DN, Boyle JF, Toberman H, Adams JL, Bryant CL, Chiverrell R, Helliwell RC, Keenan P, Lilly A, Tipping E.  2016.  Long-term macronutrient stoichiometry of UK ombrotrophic peatlands. Science of the Total Environment. 572:1561-1572.
Gilbert L.  2016.  Louping ill virus in the UK: a review of the hosts, transmission and ecological consequences of control. Experimental and Applied Acarology. 68:363-374.
Gibson SA, Horgan GW, Francis LE, Gibson AA, Stephen AM.  2016.  Low calorie beverage consumption is associated with energy and nutrient intakes and diet quality in British adults. Nutrients. 8:ArticleNo.9.
2015
Stutter MI, Shand CA, George TS, Blackwell MSA, Dixon L, Bol R, Mackay RL, Richardson AE, Condron LM, Haygarth PM.  2015.  Land use and soil factors affecting accumulation of phosphorus species in temperate soils. Geoderma. 257:29-39.
Moore EK, Britton AJ, Iason GR, Pemberton JM, Pakeman RJ.  2015.  Landscape-scale vegetation patterns influence small-scale grazing impacts. Biological Conservation. 192:218-225.
Yu P, Li XX, White PJ, Li CJ.  2015.  A large and deep root system underlies high nitrogen-use efficiency in maize production. PLoS ONE. 10:e0126293.
Doull L, Wattegedera SR, Longbottom D, Mwangi D, Nath M, Glass EJ, Entrican G.  2015.  Late production of CXCL8 in ruminant oro-nasal turbinate cells in response to Chlamydia abortus infection. Veterinary Immunology and Immunopathology. 168:97-102.
McKee A.  2015.  Legitimising the laird? Communicative action and the role of private landowner and community engagement in rural sustainability. Development Journal of Rural Studies. 41:23-36.
Zgadzaj R, James EK, Kelly S, Kawaharada Y, de Jonge N, Jensen DB, Madsen LH, Radutoiu S.  2015.  A legume genetic framework controls infection of nodules by symbiotic and endophytic bacteria. PLoS Genetics. 11:e1005280.
Crittenden PD, Scrimgeour CM, Minnullina G, Sutton MA, Tang YS, Theobald MR.  2015.  Lichen response to ammonia deposition defines the footprint of a penguin rookery. Biogeochemistry. 122:295-311.
Hopkins J, Warburton J.  2015.  Local perception of infrequent, extreme upland flash flooding: prisoners of experience? Disasters. 39:546-569.
Jurado NV, Tanner AE, Blevins SR, McNair HM, Mayes RW, Lewis RM.  2015.  Long-chain alcohols did not improve predictions of the composition of tall fescue and red clover mixtures over n-alkanes alone. Grass and Forage Science. 70:499-506.
Brown JWS, Simpson C, Marquez Y, Gadd GM, Barta A, Kalyna M.  2015.  Lost in translation: pitfalls in deciphering plant alternative splicing transcripts. The Plant Cell. 27:2083-2087.
2014
Hannam KD, Neilsen GH, Neilsen D, Rabie WS, Midwood AJ, Millard P.  2014.  Late-season foliar urea applications can increase berry yeast-assimilable nitrogen in winegrapes (Vitis vinifera L.). American Journal of Enology and Viticulture. 65:89-95.
Pakeman RJ.  2014.  Leaf dry matter content predicts herbivore productivity, but its functional diversity is positively related to resilience in grasslands. PLoS ONE. 9:e101876.
Brown KM.  2014.  Leave only footprints? How traces of movement shape the appropriation of space Cultural Geographies.
Man J, Wang D, White PJ, Yu Z.  2014.  The length of micro-sprinkling hoses delivering supplemental irrigation affects photosynthesis and dry matter production of winter wheat. Field Crops Research. 168:65-74.
Zhang X, White RP, Demir E, Jedryczka M, Lange RM, Islam M, Li ZQ, Huang YJ, Hall AM, Zhou G et al..  2014.  Leptosphaeria spp., phoma stem canker and potential spread of L. maculans on oilseed rape crops in China. Plant Pathology. 63:598-612.
Edwards P, Pignotti E, Mellish C, Eckhardt A, Ponnamperuma K, Bouttaz T, Philip L, Pangbourne K, Polhill JG, Gotts NM.  2014.  Lessons learnt from the deployment of a semantic virtual research environment. Journal of Web Semantics. 27-28:70-77.
Zhang LP, Wang XH, Ya ML, Wu YL, Li YY, Zhang ZL.  2014.  Levels of endocrine disrupting compounds in South China Sea. Marine Pollution Bulletin. 85:628-633.
Tomczynska I, Stefanczyk E, Chmielarz M, Karasiewicz B, Kaminski P, Jones JDG, Lees AK, Sliwka J.  2014.  A locus conferring effective late blight resistance in potato cultivar Sarpo Mira maps to chromosome XI. Theoretical and Applied Genetics. 127:647-657.
Bardou F, Ariel F, Simpson CG, Romero-Barrios N, Laporte P, Balzergue S, Brown JWS, Crespi M.  2014.  Long noncoding RNA modulates alternative splicing regulators in Arabidopsis. Developmental Cell. 30:166-176.
Zhang ZL, Leith C, Rhind SM, Ker C, Osprey M, Kyle C, Coull MC, Thomson C, Green G, Maderova L et al..  2014.  Long term temporal and spatial changes in the distribution of polychlorinated biphenyls and polybrominated diphenyl ethers in Scottish soils. Science of the Total Environment. 468-469:158-164.
Littlewood NA, Greenwood S, Quin S, L.O. Pakeman RJ, Woodin SJ.  2014.  Long-term trends in restored moorland vegetation assemblages. Community Ecology.. 15:104-112.
Zakharova A, Midwood AJ, Hunt JE, Graham SL, Artz RRE, Turnbull MH, Whitehead D, Millard P.  2014.  Loss of labile carbon following soil disturbance determinded by measurement of respired d¹³CO. Soil Biology and Biochemistry. 68:125-132.
Singh BK, Quince C, Macdonald CA, Khachane A, Thomas N, Abu Al-Soud W, Sorensen SJ, He ZL, White D, Sinclair A et al..  2014.  Loss of microbial diversity in soils is coincident with reductions in some specialized functions. Environmental Microbiology. 16:2408-2420.
Speed JDM, Meisingset EL, Austrheim G, Hester AJ, Mysterud A, Tremblay J, Solberg EJ.  2014.  Low intensities of red deer browing constrain rowan growth in mature boreal forests of western Norway. Ecoscience. 20:311-318.
Sulpice R, Ishihara H, Schlereth A, Cawthray GR, Encke B, Giavalisco P, Ivakov A, Arrivault S, Jost R, Krohn N et al..  2014.  Low levels of ribosomal RNA partly account for the very high photosynthetic phosphorus-use efficiency of Proteaceae species. Plant Cell and Environment. 37:1276-1298.
Baker K, Bayer M, Cook N, Dreizig S, Dhillon T, Russell J, Hedley PE, Morris J, Ramsay L, Colas I et al..  2014.  The low recombining pericentromeric region of barley restricts gene diversity and evolution but not gene expression. The Plant Journal. 79:981-992.
2013
Mickovski SB, Buss K, McKenzie BM, Sokmener B.  2013.  Laboratory study on the potential use of recycled inert construction waste material in the substrate mix for extensive green roofs. Ecological Engineering. 61:706-714.
Ribeiro KM, Braga RA, Scalco MS, Horgan GW.  2013.  Leaf area estimation of medium size plants using optical metrology. Revista Brasileira de Engenharia Agricola e Ambiental. 17:595-601.
Yang Z, Downie H, Dupuy L, MacDonald M.  2013.  Light-sheet tomography for in situ imaging of Arabidopsis Thaliana roots. Optics Express. 21:16239-16247.
Schiffers K, Bourne EC, Lavergne S, Thuiller W, Travis JMJ.  2013.  Limited evolutionary rescue of locally adapted populations facing climate change. Philosophical Transactions of the Royal Society B. 368:e20120083.
Hackett CA, McLean K, Bryan GJ.  2013.  Linkage analysis and QTL mapping using SNP dosage data in a tetraploid potato mapping population. PLoS ONE.. 8:e63939.
Nijnik M, Miller DR, Nijnik, M.; Mather A.  2013.  Linking multi-functional forestry goals with sustainable development objectives: a multi-national Q-study with a particular focus on Scotland. Journal of Settlements and Spatial Planning. 4:185-190.
Perez-Barberia FJ, Hooper RJ, Gordon IJ.  2013.  Long-term density-dependent changes in habitat selection in red deer (Cervus elaphus). Oecologia. 173:837-847.
Kapfer J, Birks HJB, Felde VA, Klanderud K, Martinessen T, Ross LC, Schei FH, Virtanen R, Grytnes JA.  2013.  Long-term vegetation stability in northern Europe as assessed by changes in species co-occurrences. Plant Ecology and Biodiversity. 6:289-302.
2012
Campbell CD, Lilly A, Towers W, Chapman SJ, Werritty A, Hanley N.  2012.  Land use and a low-carbon society. Earth and Environmental Science Transactions of the Royal Society of Edinburgh, 103, 165-173..
Perez-Espona S, McLeod JE, Franks NR.  2012.  Landscape genetics of a top neotropical predator. Molecular Ecology. 21:5969-5985.
Dinnie E, Blackstock KL, Dilley R.  2012.  Landscapes of challenge and change: contested views of the Cairngorms National Park. Landscape Research. 37:451-466.
Rhee YJ, Hillier S, Gadd GM.  2012.  Lead transformation to pyromorphite by fungi. Current Biology. 22:237-241.
Demars BOL, Kemp JL, Friberg N, Usseglio-Polatera P, Harper DM.  2012.  Linking biotopes to invertebrates in rivers: biological traits, taxonomic composition and diversity. Ecological Indicators. 23:301-311.
Blackstock KL, Waylen KA, Dunglinson J, Marshall KM.  2012.  Linking process to outcomes - internal and external criteria for a stakeholder involvement in River Basin Management Planning. Ecological Economics. 77:113-122.
Dobson G, Shrestha M, Hilz H, Karjalainen RO, McDougall GJ, Stewart D.  2012.  Lipophilic components in black currant seed and pomace extracts. European Journal of Lipid Science and Technology. 114:575-582.
Shibu ME, van Keulen H, Leffelaar PA.  2012.  Long-term dynamics of soil C and N in intensive rice-based cropping systems of the Indo-Gangetic Plains (IGP): A modelling approach. Ecological Modelling. 232:40-63.
Brooker RW, Matesanz S, Valladares F, Klotz S.  2012.  Long-term spatial pattern change in a semi-arid plant community: The role of climate and composition. Acta Oecologia. 45:8-15.
Hossain MS, Liao JQ, James EK, Sato S, Tabata S, Jurkiewicz A, Madsen LH, Stougaard J, Ross L, Szczyglowski K.  2012.  Lotus japonicus ARPC1 is required for rhizobial infection. Plant Physiology. 160:917-928.
2011
Ballingall KT, Nath M, Holliman A, Laming E, Steele PJ, Willoughby K.  2011.  Lack of evidence for an association between MHC diversity and the development of bovine neonatal pancytopenia in Holstein dairy cattle. Veterinary Immunology and Immunopathology. 141:128-132.
Pakeman RJ, Eastwood A, Scobie A.  2011.  Leaf dry matter content as a predictor of grassland litter decomposition: a test of the "Mass Ratio Hypothesis". Plant and Soil. 342:49-57.
Upadhyaya HD, Dwivedi SL, Ambrose M, Ellis N, Berger J, Smykal P, Debouck D, Duc G, Dumet D, Flavell A et al..  2011.  Legume genetic resources: management, diversity assessment, and utilization in crop improvement. Euphytica. 180:27-47.
Gyaneshwar P, Hirsch AM, Moulin L, Chen WM, Elliott GN, Bontemps C, Estrada-de los Santos P, Gross E, dos Reis J, F.B et al..  2011.  Legume-nodulating betaproteobacteria: diversity, host range, and future prospects. Molecular Plant-Microbe Interactions. 24:1276-1288.
Yao H, Gao Y, Nicol GW, Campbell CD, Prosser JI, Zhang L, Han W, Singh BK.  2011.  Links between ammonia oxidizer community structure, abundance and nitrification potential in acidic soils. Applied and Environmental Microbiology. 77:4618-4625.
Hooftman DAP, Flavell AJ, Jansen H, den Nijs HCN, Syed NH, Sorensen AP, Wengel PO, van de Wiel C.  2011.  Locus-dependent selection in crop-wild hybrids of lettuce under field conditions and its implication for GM crop development. Evolutionary Applications. 4:648-659.
Davies AL.  2011.  Long-term approaches to native woodland restoration: Palaeoecological and stakeholder perspectives on Atlantic forests of Northern Europe. Forest Ecology and Management. 261:751-763.
Paterson E, Sim A, Osborne SM, Murray PJ.  2011.  Long-term exclusion of plant-inputs to soil reduces the functional capacity of microbial communities to mineralise recalcitrant plant-derived carbon sources. Soil Biology and Biochemistry. 43:1873-1880.
Macdonald CA, Clark IM, Zhao FJ, Hirsch PR, Singh BK, McGrath SP.  2011.  Long-term impacts of zinc and copper enriched sewage sludge additions on bacterial, archaeal and fungal communities in arable and grassland soils. Soil Biology and Biochemistry. 43:932-941.
Liu J, Francis B, Soothill K.  2011.  A longitudinal study of escalation in crime seriousness. Journal of Quantitative Criminology. 27:175-196.
Haanes H, Roed KH, Perez-Espona S, Rosef O.  2011.  Low genetic variation support bottlenecks in Scandinavian red deer. European Journal of Wildlife Research. 57:1137-1150.
2010
Magurran AE, Baillie SR, Buckland ST, Dick JM, Elston DA, Scott EM, Smith RI, Somerfield PJ, Watt AD.  2010.  Long-term datasets in biodiversity research and monitoring: assessing change in ecological communities through time. Trends in Ecology and Evolution. 25:574-582.
Deng H, Zhang B, Yin R, Wang HL, Mitchell SM, Griffiths BS, Daniell TJ.  2010.  Long-term effect of re-vegetation on the microbial community of a severely eroded soil in sub-tropical China. Plant and Soil. 328:447-458.
Oni SK, Dillon PJ, Futter MN.  2010.  Landscape-scale control of carbon budget of Lake Simcoe: A process-based modelling approach. International Journal of Great Lakes Research. Published online..
Hough RL, Fletcher T, Leonardi GS, Goessler W, Gnagnarella P, Clemens F, Gurzau E, Koppova K, Rudnai P, Kumar R et al..  2010.  Lifetime exposure to arsenic in residential drinking water in Central Europe. International Archives of Occupational and Environmental Health. 83(5):471-481.
Evans C, Cooper D, Monteith D, Helliwell R, Moldan F, Hall J, Rowe E, Cosby J.  2010.  Linking monitoring and modelling: can long-term datasets be used more effectively as a basis for large-scale prediction? Biogeochemistry. 101(1-3):211-227.
Shibu ME, Leffalaar PA, van Keulen H, Aggarwal PK.  2010.  LINTUL3, a simulation model for nitrogen-limited situations: applications to rice. European Journal of Agronomy. 32(4):255-271.
Atickem A, Williams S, Bekele A, Thirgood SJ.  2010.  Livestock predation in the Bale Mountains, Ethiopia. African Journal of Ecology. 48(4):1076-1082.
Prager K.  2010.  Local and regional partnerships in natural resource management: The challenge of bridging institutional levels. Environmental Management. 46(5):711-724.
Toberman H, Laiho R, Evans CD, Artz RRE, Fenner N, Vavrova P, Freeman C.  2010.  Long-term drainage for forestry inhibits extracellular phenol oxidase activity in Finnish boreal mire peat. European Journal of Soil Science. 61(6):950-957.
2009
Opik M, Metsis M, Daniell TJ, Zobel M, Moora M.  2009.  Large-scale parallel 454 sequencing reveals host ecological group specificity of arbuscular mycorrhizal fungi in a boreonemoral forest. New Phytologist. 184:424-437.
Torres-Ca P, Hinojosa MB, Garcia-Ruiz R, Daniell TJ, Carreira JA.  2009.  Linking biogeochemical variability and microbial community structure in forest soils: Abies pinsapo-fir forests as a study case. Ecosistemas. 18:91-102.
Dennis PG, Hirsch PR, Smith SJ, Taylor RG, Valsami-Jones E, Miller AJ.  2009.  Linking rhizoplane pH and bacterial density at the microhabitat scale. Journal of Microbiological Methods. 76:101-104.
Braga RA, Dupuy L, Pasqual M, Cardoso RR.  2009.  Live biospeckle laser imaging of root tissues. European Biophysics Journal. 38:679-686. Abstract
Smith LA, Marion G, Swain DL, White PCL, Hutchings MR.  2009.  Livestock grazing behavior and inter- versus intraspecific disease risk via the fecal-oral route. Behavioral Ecology. 20:426-432.
Koroleva OA, Brown JWS, Shaw PJ.  2009.  Localization of eIF4A-III in the nucleolus and splicing speckles is an indicator of plant stress. Plant Signaling & Behavior. 4:1148-1151.
Baggaley NJ, Langan SJ, Futter MN, Potts JM, Dunn SM.  2009.  Long-term trends in hydro-climatology of a major Scottish mountain river. Science of the Total Environment. 407:4633-4641.
Wouters J, Raven JA, Minnhagen S, Janson S.  2009.  The luggage hypothesis: Comparisons of two phototrophic hosts with nitrogen-fixing cyanobacteria and implications for analogous life strategies for kleptoplastids/secondary symbiosis in dinoflagellates. Symbiosis. 49:61-70.
Fortunel C, Garnier E, Joffre R, Kazakou E, Quested H, Grigulis K, Lavorel S, Ansquer P, Castro H, Cruz P et al..  2009.  Leaf traits capture the effects of land use changes and climate on litter decomposability of grasslands across Europe. Ecology. 90(3):598-611.
Trinder CJ, Johnson D, Artz RRE.  2009.  Litter type, but not plant cover, regulates initial litter decomposition and fungal community structure in recolonising cutover peatlands. Soil Biology and Biochemistry. 41(3):651-655.
Xu Y, Masui T.  2009.  Local air pollutant emission reduction and ancillary carbon benefits of SO2 control policies: Application of AIM/CGE model to China. European Journal of Operational Research. 198(1):315-325.
Artz RRE, Reid E, Anderson IC, Campbell CD, Cairney JWG.  2009.  Long term repeated prescribed burning increases evenness in the basidiomycete laccase gene pool in forest soils. FEMS Microbiology Ecology. 67(3):397-410.
Marriott CA, Hood K, Fisher JM, Pakeman RJ.  2009.  Long-term impacts of extensive grazing and abandonment on the species composition, richness, diversity and productivity of agricultural grassland. Agriculture, Ecosystems and Environment.. 134:190-200.
Futter MN, Forsius M, Holmberg M, Starr M.  2009.  A long-term simulation of the effects of acidic deposition and climate change on surface water dissolved organic carbon concentrations in a boreal catchment. Hydrology Research.. 40(2-3):291-305.
Baggaley NJ, Langan SJ, Futter MN, Potts JM.  2009.  Long-term trends in hydroclimatology of a Scottish mountain river. The Science of the Total Environment. 407(16):4633-4641.
2008
Butler A, Glasbey CA.  2008.  A latent Gaussian model for compositional data with zeros. Journal of the Royal Statistical Society Series C - Applied Statistics. 57:505-520. Abstract
Selman C, McLaren JS, Mayer CD, Duncan JS, Collins AR, Duthie GG, Redman P, Speakman JR.  2008.  Lifelong, . Rejuvenation Research. 11:83-95. Abstract
Stewart D.  2008.  Lignin as a base material for materials applications; Chemistry, application and economics (Invited mini review). Industrial Crops and Products. 27:202-207. Abstract
Bishop HO, Grieve IC, Chudek JA, Hopkins DW.  2008.  Liming upland grassland: The effects on earthworm communities and the chemical characteristics of carbon in casts. European Journal of Soil Science. 59:526-531. Abstract
Whybrow S, Horgan GW, Stubbs RJ.  2008.  Low-energy reporting and duration of recording period. European Journal of Clinical Nutrition. 62:1148-1150. Abstract
Lozada-Ellison LM.  2008.  La cuisine ceremonielle de la Fete des Morts (Mexique). Food and History. 6(2):133-154.
Paterson E, Osler GHR, Dawson LA, Gebbing T, Sim A, Ord B.  2008.  Labile and recalcitrant plant fractions are utilised by distinct microbial communities in soil: independent of the presence of roots and mycorrhizal hyphae. Soil Biology and Biochemistry. 40:1103-1113.
Perez-Espona S, Perez-Barberia FJ, McLeod J, Jiggins CJ, Gordon IJ, Pemberton J.  2008.  Landscape features affect gene flow of Scottish Highland red deer (Cervus elaphus). Molecular Ecology. 17(4):981-996.
Sang N, Ode A, Miller D.  2008.  Landscape metrics and visual topology in the analysis of landscape preference. Environment and Planning B. 35(3):504-520.
Williams AP, Gordon H, Jones D, Strachan N, Avery LM, Killham K.  2008.  Leaching of bioluminescent Escherichia coli O157:H7 from sheep and cattle faeces during rainstorm events. Journal of Applied Microbiology. 105(5):1452-1460.
Rahman A, Duncan AJ, Miller DW, Clemens J, Frutos P, Gordon IJ, Rehman A, Baig A, Ali F, Wright IA.  2008.  Livestock feed resources, production and management in the agro-pastoral system of the Hindu Kush-Karakoram-Himalayan region of Pakistan: The effect of accessibility. Agricultural Systems. 96(1-3):26-36.
Campbell CD, Cameron CM, Bastias BA, Chen C, Cairney JWG.  2008.  Long term repeated burning in a wet sclerophyll forest reduces fungal and bacterial biomass and responses to carbon substrates. Soil Biology and Biochemistry. 40(9):2246-2252.
Phuyal M, Artz RRE, Sheppard L, Johnson D.  2008.  Long-term nitrogen deposition increases phosphorus limitation of bryophytes in an ombrotrophic bog. Plant Ecology. 196(1):111-121.
Buijs A, Fischer A, Rink D, Young JC.  2008.  Looking beyond superficial knowledge gaps: Understanding public representations of biological diversity. International Journal Biodiversity Science Management. 4(2):65-80.
2007
Hancock RD, Walker PG, Pont SDA, Marquis N, Vivera S, Gordon SL, Brennan RM, Viola R.  2007.  L-Ascorbic acid accumulation in fruit of Ribes nigrum occurs by in situ biosynthesis via the L-galactose pathway. Functional Plant Biology. 34:1080-1091. Abstract
Allcroft DJ, Glasbey CA, Paulo MJ.  2007.  A latent Gaussian model for multivariate consumption data. Food Quality and Preference. 18:508-516. Abstract
Latijnhouwers M, Gillespie T, Boevink P, Hawes C, Carvalho C.  2007.  Localisation and domain characterisation of Arabidopsis Golgin Candidates. Journal of Experimental Botany. 58:4373-4386. Abstract
Freppaz M, Edwards AC, Williams BL, Scalenghe R, Zanini E.  2007.  Labile nitrogen, carbon, and phosphorus pools and nitrogen mineralization and immobilization rates at low temperatures in seasonally snow-covered soils. Biology and Fertility of Soils. 43(5):519-529.
Broos K, Macdonald LM, Warne MSJ, Heemsbergen DA, Barnes MB, Bell M, McLaughlin MJ.  2007.  Limitations of field soil microbial biomass measures. Soil Biology and Biochemistry. 39(10):2693-2695.
Reeves AD, Kirk EA, Blackstock KL.  2007.  The limitations of regulatory science in the effective control of diffuse pollution. Law, Science and Policy. 3:123-156.
Kelly GJ, Blackstock KL, Horsey BL.  2007.  Limits to learning for developing a sustainable region: lessons from north east Queensland. Australisian Journal of Environmental Management. 14(4):231-242.
Scott AJ, Shannon PH.  2007.  Local landscape designations in Scotland: Opportunity or barrier to effective landscape management. Landscape and Urban Planning. 81(3):257-269.
Sinclair ARE, Mduma SAR, Hopcraft G, Fryxell J, Hillborn R, Thirgood SJ.  2007.  Long-term ecosystem dynamics in the Serengeti: lessons for conservation. Conservation Biology. 21(3):580-590.
Macdonald CA, Singh BK, Peck JA, van Schaik AP, Hunter LC, Horswell J, Campbell CD, Speir TW.  2007.  Long-term exposure to Zn-spiked sewage sludge alters soil community structure. Soil Biology and Biochemistry. 39(10):2576-2586.
Andrist-Rangel Y, Edwards AC, Hillier S, Oborn I.  2007.  Long-term K dynamics in organic and conventional mixed cropping systems as related to management and soil properties. Agriculture, Ecosystems and Environment. 122(4):413-426.
Philip LJ, Gilbert A.  2007.  Low income amongst the older population in Great Britain: a rural/non-rural perspective on income levels and dynamics. Regional Studies. 41(6):735-746.
2006
Quigg A, Kevekordes K, Raven JA, Beardall J.  2006.  Limitations on microalgal growth at very low photon fluence rates: the role of energy slippage. Photosynthesis Research. 88:299-310. Abstract
Kilminster KL, Walker DI, Thompson PA, Raven JA.  2006.  Limited nutritional benefit to the seagrass Halophila ovalis, in culture, following sediment organic matter enrichment. Estuarine Coastal and Shelf Science. 68:675-685. Abstract
Matthews R, Selman P.  2006.  Landscape as a focus for integrating human and environmental processes. Journal of Agricultural Economics. 57(2):199-212.
Brown DG, Aspinall RJ, Bennett DA.  2006.  Landscape models and explanation in landscape ecology- A space for generative landscape science? Professional Geographer. 58(4):369-382.
Wilson CA, Bacon JR, Cresser MS, Davidson DA.  2006.  Lead isotope ratios as a means of sourcing anthropogenic lead in archaeological soils. A pilot study of an abandoned Shetland croft. Archaeometry. 48:501-509.
Dawson JJC, Campbell CD, Towers W, Cameron CM, Paton GI.  2006.  Linking biosensor responses to Cd, Cu and Zn partitioning in soils. Environmental Pollution. 142(3):493-500.
Sherlock KL, Innes A, Cox S, Smith A, Mason A.  2006.  Living with dementia in rural and remote Scotland: Diverse experiences of people with dementia and their carers. Journal of Rural Studies. 22:161-176.
Gimona A, Brewer MJ.  2006.  Local environmental effects and spatial effects in macroecological studies using mapped abundance classes: the case of the rook Corvus frugilegus in Scotland. Journal of Animal Ecology. 75(5):1140-1146.
Hester AJ, Scogings PF, Trollope WSW.  2006.  Long-term impacts of goat browsing on bush-clump dynamics in a semi-arid subtropical savanna. Plant Ecology. 183(2):277-290.
Evans DM, Redpath SM, Evans SA, Elston DA, Gardner CJ, Dennis P, Pakeman RJ.  2006.  Low intensity, mixed livestock grazing improves the breeding abundance of a common insectivorous passerine. Biology Letters. 2(4):636-638.
Irvine RJ, Corbishley H, Pilkington JG, Albon SD.  2006.  Low level parasitic worm burdens reduce body condition in free ranging red deer (Cervus elaphus). Parasitology. 133(4):465-475.
2005
Casa R, Jones HG.  2005.  LAI retrieval from multiangular image classification and inversion of a ray tracing model. Remote Sensing of Environment. 98:414-428.
Randall TA, Dwyer RA, Huitema E, Beyer K, Cvitanich C, Kelkar H, Ah Fong AMV, Gates K, Roberts S, Yatzkan E et al..  2005.  Large-scale gene discovery in the oomycete Phytophthora infestans reveals likely components of phytopathogenicity shared with true fungi. Molecular Plant-Microbe Interactions. 18:229-243. Abstract
Castelli L, Bryan GJ, Blok VC, Ramsay G, Phillips MS.  2005.  Life stage responses observed amongst fifteen wild Solanum species to resistant Globodera pallida. Nematology. 7:701-711. Abstract
Nunan N, Daniell TJ, Singh BK, Papert A, McNicol JW, Prosser JI.  2005.  Links between plant and rhizoplane bacterial communities in grassland soils, characterized using molecular techniques. Applied and Environmental Microbiology. 71:6784-6792. Abstract
Hopkins DW, Marinari S, Tilston EL, Halpin C.  2005.  Lumbricus terrestris counteract the effects of modified lignin biosynthesis on the decomposition of tobacco plant residues. Soil Biology & Biochemistry. 37:1141-1144. Abstract
1992
Crittenden PD, Scrimgeour CM, Minnullina G, Sutton MA, Tang YS, Theobald MR.  1992.  Lichen response to ammonia deposition defines the footprint of a penguin rookery. Biogeochemistry. 122:295-311.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.