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A
Aalders IH.  2008.  Modelling land use decision behavior with Bayesian belief networks. Ecology and Society. 13(1):16.
Abdul-Salam Y, Phimister E.  2019.  Modelling the impact of market imperfections on farm household investment in stand-alone solar PV systems. World Development. 116:66-76.
Abreu IN, Choi YH, Sawaya ACHF, Eberlin MN, Mazzafera P, Verpoorte R.  2011.  Metabolic alterations in different development stages Pilocarpus microphyllus. Planta Medica. 77:293-300.
Adam MAM, Phillips MS, Blok VC.  2007.  Molecular diagnostic key for identification of single juveniles of seven common and economically important species of root-knot nematode (Meloidogyne spp.). Plant Pathology. 56:190-197. Abstract
Adediran GA, Lundberg D, Almkvist G, Pradas del Real AE, Klysubun W, Hillier S, Gustafsson JP, Simonsson M.  2021.  Micro and nano sized particles in leachates from agricultural soils: phosphorus and sulfur speciation by x-ray micro-spectroscopy. Water Research. 189:ArticleNo.116585.
Aitkenhead MJ.  2017.  Mapping peat in Scotland with remote sensing and site characteristics. European Journal of Soil Science. 68:28-38.
Aitkenhead MJ.  2017.  Mapping peat in Scotland with remote sensing and site characteristics. European Journal of Soil Science. 68:28-38.
Aitkenhead MJ, Coull MC.  2015.  Mapping soil carbon stocks across Scotland using a neural network model. Geoderma. 262:187-188.
Aitkenhead MJ, Coull MC.  2016.  Mapping soil carbon stocks across Scotland using a neural network model. Geoderma. 262:187-188.
Aitkenhead MJ, Coull MC.  2019.  Mapping soil profile depth, bulk density and carbon stock in Scotland using remote sensing and spatial covariates. European Journal of Soil Science. 71:553-567.
Aitkenhead MJ, Aitkenhead-Peterson JA, McDowell W, Smart RP, Cresser M.  2007.  Modelling doc export from catchments in Scotland using neural networks. Computers and Geosciences. 33:423-436.
Al-Khafaji AM, Clegg SR, Pinder AC, Luu L, Hansford KM, Seelig F, Dinnis RE, Margos G, Medlock JM, Feil EJ et al..  2019.  Multi-locus sequence typing of Ixodes ricinus and its symbiont Candidatus Midichloria mitochondrii across Europe reveals evidence of local co-cladogenesis in Scotland. Ticks and Tick-borne Diseases.. 10:52-62.
Allinson D, Irvine KN, Edmondson JL, Tiwary A, Hill G, Morris J, Bell M, Davies ZG, Firth SK, Fisher J et al..  2016.  Measurement and analysis of household carbon: the case of a UK city. Applied Energy. 164:871-881.
Amar D, Frades I, Diels T, Zaltzman D, Ghatan N, Hedley PE, Alexandersson E, Tzfadia O, Shamir R.  2015.  The MORPH-R web server and software tool for predicting missing genes in biological pathways. Physiologia Plantarum. 155:12-20.
Andersen R, Chapman SJ, Artz RRE.  2013.  Microbial communities in natural and disturbed peatlands: a review. Soil Biology and Biochemistry. 57:979-994.
Andrade LP, Rhind SM, Rae MT, Kyle CE, Jowett J, Lea RG.  2013.  Maternal undernutrition does not alter Sertoli cell numbers or the expression of key developmental markers in the mid-gestation ovine fetal testis. Journal of Negative Results in BioMedicine. 12
Andriotis VME, Saalbach G, Waugh R, Field RA, Smith AM.  2016.  The Maltase involved in starch metabolism in barley endosperm is encoded by a single gene. PLoS One. 11:e0151642.
Andrist-Rangel Y, Simonsson M, Andersson S, Oborn I, Hillier S.  2006.  Mineralogical budgeting of potassium in soil: a basis for understanding standard measures of reserve potassium. Journal of Plant Nutrition and Soil Science. 169:605-615.
Aponte H, Meli P, Butler BM, Paolini J, Matus F, Merino C, Cornejo P, Kuzyakov Y.  2020.  Meta analysis of heavy metal effects on soil enzyme activities. Science of the Total Environment. 737:ArticleNo.139744.
Aponte H, Meli P, Butler BM, Paolini J, Matus F, Merino C, Cornejo P, Kuzyakov Y.  2020.  Meta-analysis of heavy metal effects on soil enzyme activities. Science of the Total Environment. 737:ArticleNo.139744.
Armas C, Schoeb C, Gutierrez JR.  2013.  Modulating effects of ontogeny on the outcome of plant-plant interactions along stress gradients. New Phytologist. 200:7-9.
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Bagavathiannan MV, Begg GS, Gulden RH, Van Acker RC.  2012.  Modelling the dynamics of feral alfalfa populations and its management implications. PLoS One. 7:e39440.
Bartley PM, Wright SE, Maley SW, Macaldowie CN, Nath M, Hamilton CM, Katzer F, Buxton D, Innes EA.  2012.  Maternal and foetal immune responses of cattle following an experimental challenge with Neospora caninum at day 70 of gestation. Veterinary Research. 43:38.
Beale CM.  2007.  Managing visitor access to seabird colonies: a spatial simulation and empirical observations. Ibis (Suppl.1.). 149:102-111.
Begg GS, Hockaday S, McNicol JW, Askew M, Squire GR.  2006.  Modelling the persistence of volunteer oilseed rape (Brassica napus). Ecological Modelling. 198:195-207. Abstract
Begum K, Kuhnert M, Yeluripati JB, Ogle SM, Parton WJ, Williams SA, Pan G, Cheng K, Ali MA, Smith P.  2019.  Modelling greenhouse gas emissions and mitigation potentials in fertilized paddy rice fields in Bangladesh. Geoderma. 341:206-215.
Beleggia R, Platani C, Papa R, Di Chio A, Barros E, Mashaba C, Wirth J, Fammartino A, Sautter C, Conner S et al..  2011.  Metabolomics and food processing: from semolina to pasta. Journal of Agricultural and Food Chemistry. 59:9366-9377.
Belzunce-Segarra MJ, Prego R, Wilson MJ, Bacon J, Santos-Echeand J.  2008.  Method speciation in surface sediments of the Vigo Ria (NW Iberian Peninsula). Scientia Marina. 72:119-126.
Bennett AE, Thomsen M, Strauss SY.  2011.  Multiple mechanisms enable invasive species to suppress native species. Amercian Journal of Botany. 98:1086-1094.
Bisognin DA, Douches DS, Buszka L, Bryan GJ, Wang D.  2005.  Mapping late blight resistance in Solanum microdontum Bitter. Crop Science. 45:340-345. Abstract
Blackstock KL, White V, McCrum G, Scott A, Hunter C.  2008.  Measuring responsibility: an appraisal of a Scottish National Park's sustainable tourism indicators. Journal of Sustainable Tourism. 16(3):276-297.
Blower TR, Fineran PC, Johnson MJ, Toth IK, Humphreys DP, Salmond GPC.  2009.  Mutagenesis and functional characterisation of the RNA and protein components of the toxIN abortive infection and toxin-antitoxin locus of Erwinia. Journal of Bacteriology. 191:6029-6039.
Blum M, Boehler M, Randall E, Young V, Csukai M, Kraus S, Moulin F, Scalliet G, Avrova AO, Whisson SC et al..  2010.  Mandipropamid targets the cellulose synthase-like PiCesA3 to inhibit cell wall biosynthesis in the oomycete plant pathogen, Phytophthora infestans. Molecular Plant Pathology. 11:227-243.
Bohan DA, Powers SJ, Champion G, Haughton AJ, Hawes C, Squire GR, Cussans J, Mertens SK.  2011.  Modelling rotations: can crop sequences explain arable weed seedbank abundance? Weed Research. 51:422-432.
Bohn T, McDougall GJ, Alegria A, Alminger M, Arrigoni E, Aura AM, Brito C, Cilla A, El SN, Karakaya S et al..  2015.  Mind the gap-deficits in our knowledge of aspects impacting the bioavailability of phytochemicals and their metabolites - a position paper focusing on carotenoids and polyphenols. Molecular Nutrition and Food Research. 59:1307-1323.
Bradshaw JE, Bryan GJ, Lees AK, McLean K, Solomon-Blackburn RM.  2006.  Mapping the R10 and R11 genes for resistance to late blight (Phytophthora infestans) present in the potato (Solanum tuberosum) R-gene differentials of Black. Theoretical and Applied Genetics. 112:744-751. Abstract
Brault ML, Petit JD, Immel F, Nicolas WJ, Glavier M, Brocard L, Gaston A, Fouche M, Hawkins TJ, Crowet JM et al..  2019.  Multiple C2 domains and transmembrane region proteins (MCTPs) tether membranes at plasmodesmata. Embo Reports. 20:ArticleNo.e47182..
Brooker RW, Travis JMJ, Clark EJ, Dytham C.  2007.  Modelling species' range shifts in a changing climate: The impacts of biotic interactions, dispersal distance and the rate of climate change. Journal of Theoretical Biology. 245(1):59-65.
Brooker RW, Karley AJ, Newton AC, Pakeman RJ, Schob C.  2016.  Mechanisms and consequences of facilitation in plant communities. Facilitation and sustainable agriculture: a mechanistic approach to reconciling crop production and conservation. Functional Ecology. 30:98-107.
Brouwer R, Martin-Ortega J.  2012.  Modeling self-censoring of polluter pays protest votes in stated preference research to support resource damage estimations in environmental liability. Resource and Energy Economics. 34:151-166.
Brown EM, Gill CIR, McDougall GJ, Stewart D.  2012.  Mechanisms underlying the anti-proliferative effects of berry components in in vitro models of colon cancer. Current Pharmaceutical Biotechnology. 13:200-209.
Brown E, Aitkenhead MJ, Wright R, Aalders IH.  2008.  Mapping and classification of peatland on the Isle of Lewis using Landsat ETM+. Scottish Geographcial Journal. 123(3):173-192.
Brown KM, Flemsæter F, Rønningen K.  2019.  More-than-human geographies of property: Moving towards spatial justice with response-ability. Geoforum. 99:54-62.
Bryce R, van der Wal R, Mitchell R, Lambin X.  2013.  Metapopulation dynamics of a burrowing herbivore drive spatio-temporal dynamics of riparian plant communities. Ecosystems. 16:1165-1177.
Buccianti A, Nisi B, Martin-Fernandez JA, Palarea-Albaladejo J.  2014.  Methods to investigate the geochemistry of groundwaters with values for nitrogen compounds below the detection limit. Journal of Geochemical Exploration. 141:78-88.
Buddendorf WB, Malcolm IA, Geris J, Wilkinson M, Soulsby C.  2017.  Metrics to assess how longitudinal channel network connectivity and in-stream Atlantic salmon habitats are impacted by hydropower regulation. Hydrological Processes. 31:2132-2142.
Bull DJ, Smethurst JA, Sinclair I, Pierron F, Roose T, Powrie W, Bengough AG.  2020.  Mechanisms of root reinforcement in soils: an experimental methodology using four-dimensional X-ray computed tomography and digital volume correlation. Proceedings of the Royal Society A - Mathematicla Physical and Engineering Science. 476:ArticleNo.20190838.
Butler BM, Palarea-Albaladejo J, Shepherd KD, Nyambura KM, Towett EK, Sila AM, Hillier S.  2020.  Mineral-nutrient relationships in African soils assessed using cluster analysis of X-ray powder diffraction patterns and compositional methods. Geoderma. 375:Article114474.
Butler BM.  2020.  Mineral sources of aqua regia extractable base cations in Scottish soils interpreted from Cubist models trained with quantitative mineralogy data. Chemical Geology. 551:ArticleNo.119773.
Butler A, Doherty RM, Marion G.  2009.  Model averaging to combine simulations of future global vegetation carbon stocks. Environmetrics. 20:791-811.
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Cai Q, He BY, Wang SM, Fletcher S, Niu DD, Mitter N, Birch PRJ, Jin HL.  2021.  Message in a bubble: shuttling small RNAs and proteins between cells and interacting organisms using extracellular vesicles. Annual Review of Plant Biology. 72:497-524.
Cakmak I, White PJ.  2020.  Magnesium in crop production and food quality. Plant and Soil. 457:1-3.
Cameron A, Logie L, Patel K, Erhardt S, Bacon S, Middleton P, Harthill J, Forteath C, Coats JT, Kerr C et al..  2018.  Metformin selectively targets redox control of complex I energy transduction. Redox Biology. 14:187-197.
Cameron A, Logie L, Patel K, Erhardt S, Bacon S, Middleton P, Harthill J, Forteath C, Coats JT, Kerr C et al..  2018.  Metformin selectively targets redox control of complex I energy transduction. Redox Biology. 14:187-197.
Campbell R, Ducreux LJM, Morris WL, Morris JA, Suttle JC, Ramsay G, Bryan GJ, Hedley PE, Taylor MA.  2010.  The metabolic and developmental roles of cartotenoid cleavage dioxygenase 4 from potato. Plant Physiology. 154:656-664.
Campos P, Oviedo JL, Álvarez A, Ovando P, Mesa B, Caparros A.  2020.  Measuring the environmental incomes beyond standard national and ecosystem accounting frameworks: testing and comparing the agroforestry accounting system in a holm oak dehesa case study in Andalusia-Spain. Land Use Policy. 99:ArticleNo.104984.
Caron-Lormier G, Bohan DA, Dye R, Hawes C, Humphry RW, Raybould A.  2011.  Modelling an ecosystem: the example of agro-ecosystems. Ecological Modelling. 222:1163-1173.
Carpenter D, Sherlock E, Jones DT, Chiminoides J, Writer T, Neilson R, Boag B, Keith AM, Eggleton P.  2012.  Mapping of earthworm distribution for the British Isles and Eire highlights the under-recording of an ecologically important group. Biodiversity and Conservation. 21:475-485.
Castillo NRF, Reed BM, Graham J, Fern F, Bassil NV.  2010.  Microsatellite markers for raspberry and blackberry. Journal of the American Society for Horticultural Science. 135:271-278.
Caumette G, Ouypornkochagorn S, Scrimgeour CM, Raab A, Feldmann J.  2007.  Monitoring the arsenic and iodine exposure of seaweed-eating North Ronaldsay sheep from the gestational and suckling periods to adulthood by using horns as a dietary archive. Environmental Science & Technology. 41:2673-2679. Abstract
Certini G, Wilson MJ, Hillier S, Fraser AR, Delbos E.  2006.  Mineral weathering in trachydacitic-derived soils and saprolites involving formation of embryonic halloysite and gibbsite at Monte Amiata, Central Italy. Geoderma. 133(3-4):173-190.
Chaerle L, Leinonen I, Jones HG, van der Straeten D.  2007.  Monitoring and screening plant populations with combined thermal and chlorophyll fluorescence imaging. Journal of Experimental Botany. 58:773-784. Abstract
Chamen WCT, Moxey AP, Towers W, Balana BB, Hallett PD.  2015.  Mitigating arable soil compaction: A review and analysis of available cost and benefit data. Soil and Tillage Research. 146:10-25.
Chen X, Daniell TJ, Neilson R, O'Flaherty V, Griffiths BS.  2014.  Microbial and microfaunal communities in phosphorus limited, grazed grassland change composition but maintain homeostatic nutrient stoichiometry. Soil Biology and Biochemistry. 75:94-101.
Chen X, Daniell TJ, Neilson R, O'Flaherty V, Griffiths BS.  2015.  Microbial and microfaunal communities in phosphorus limited, grazed grassland change composition but maintain homeostatic nutrient stoichiometry (vol 75, pg 94, 2014). Soil Biology and Biochemistry.
Chmielewska B, Janiak A, Karcz J, Guzy-Wrobelska J, Forster BP, Nawrot M, Rusek A, Smyda P, Kedziorski P, Maluszynski M et al..  2014.  Morphological, genetic and molecular characteristics of barley root hair mutants. Journal of Applied Genetics. 55:433-447.
Citores L, Ibaibarriaga L, Lee DJ, Brewer MJ, Santos M, Chust G.  2020.  Modelling species presence-absence in the ecological niche theory framework using shape-constrained generalized additive models. Ecological Modelling. 418:ArticleNo.108926.
Clayton SJ, Clegg CD, Bristow AW, Gregory PJ, Headon DM, Murray PJ.  2010.  Movement of newly assimilated 13C carbon in the grass Lolium perenne and its incorporation into rhizosphere microbial DNA. Rapid Communications in Mass Spectrometry. 24:535-540.
Cole LJ, Stockan J, Helliwell RC.  2020.  Managing riparian buffer strips to optimise ecosystem services: a review. Agriculture, Ecosystems and Environment. 296:ArticleNo.UNSP106891.
Collins AL, Stutter MI, Kronvang B.  2014.  Mitigating diffuse pollution from agriculture: International approaches and experience. Science of the Total Environment. 468-469:1173-1177.
Comadran J, Russell JR, Booth A, Pswarayi A, Ceccarelli S, Grando S, Stanca AM, Pecchioni N, Akar T, Al-Yassin A et al..  2011.  Mixed model association scans of multi-environmental trial data reveal major loci controlling yield and yield related traits in Hordeum vulgare in Mediterranean environments. Theoretical and Applied Genetics. 122:1363-1373.
Comadran J, Russell JR, van Eeuwijk FA, Ceccarelli S, Grando S, Baum M, Stanca AM, Pecchioni N, Mastrangelo AM, Akar T et al..  2008.  Mapping adaptation of barley to droughted environments. Euphytica. 161:35-45. Abstract
Conniff A, Craig T.  2016.  A methodological approach to understanding the wellbeing and restorative benefits associated with greenspace. Urban Forestry and Urban Greening. 19:103-109.
Constantin J, Raynal H, Casellas E, Hoffman H, Bindi M, Doro L, Eckersten H, Gaiser T, Grosz B, Haas E et al..  2019.  Management and spatial resolution effects on yield and water balance at regional scale in crop models. Agricultural and Forest Meteorology. 275:184-195.
Cortada L, Mantelin S, Verdejo-Lucas S, Kaloshian I.  2012.  Marker analysis for detection of the Mi-1.2 resistance gene in tomato hybrid rootstocks and cultivars. Nematology. 14:631-642.
Cots-Folch R, Aitkenhead MJ, Martinez-Casasnovas JA.  2007.  Mapping land cover from detailed aerial photography data using textural and neural network analysis. International Journal of Remote Sensing. 28(7-8):1625-1642.
Cots-Folch R, Aitkenhead MJ, Martinez-Casasnovas JA.  2007.  Mapping land cover from detailed aerial photography data using textural and neural network analysis. International Journal of Remote Sensing. 28(7):1625-1642.
Cox ES, Marrs RH, Pakeman RJ, Le Duc MG.  2007.  A multi-site assessment of the effectiveness of Pteridium aquilinum control in Great Britain. Applied Vegetation Science. 10:429-440.
Cubitt MF, Hedley PE, Williamson NR, Morris JA, Campbell E, Toth IK, Salmond GPC.  2013.  A metabolic regulator modulates virulence and quorum sensing signal production in Pectobacterium atrosepticum. Molecular Plant Microbe Interactions. 26:356-366.
Cui S, Fu Q, Tian CG, Zhang ZL, Hough RL, Shen ZX, Ma JM, Li YF.  2019.  Modeling primary and secondary fractionation effects and atmospheric transport of polychlorinated biphenyls through single-source emissions. Environmental Geochemistry and Health. 41:1939-1951.
Cuttle SP, Newell-Price JP, Harris D, Chadwick DR, Shepherd MA, Anthony SGA, Macleod CJA, Haygarth PM, Chambers BJ.  2016.  A method-centric 'User Manual' for the mitigation of diffuse water pollution from agriculture. Soil Use and Management. 32:162-171.
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Dauwe R, Morreel K, Goeminne G, Gielen B, Rohde A, Van Beeumen J, Ralph J, Boudet AM, Kopka J, Rochange SF et al..  2007.  Molecular phenotyping of lignin-modified tobacco reveals associated changes in cell-wall metabolism, primary metabolism, stress metabolism and photorespiration. Plant Journal. 52:263-285.
Davies HV, Shepherd LVT, Stewart D, Frank T, R R, Engel K-H.  2010.  Metabolome variability in crop plant species - when, where, how much and so what? Regulatory Toxicology and Pharmacology. 58:S54-S61.
Davies HV, Shepherd LVT, Burrell MM, Carrari F, Urbanczyk-Wochniak E, Leisse A, Hancock RD, Taylor MA, Viola R, Ross HA et al..  2005.  Modulation of fructokinase activity of potato (Solanum tuberosum) results in substantial shifts in tuber metabolism. Plant and Cell Physiology. 46:1103-1115. Abstract
Davis NA, Polhill JG, Aitkenhead MA.  2021.  Measuring heterogeneity in soil networks: a network analysis and simulation-based approach. Ecological Modelling. 439:ArticleNo.109308.
Dawson LA, Hillier S.  2010.  Measurement of soil characteristics for forensic applications. Surface and Interface Analysis. 42(5):363-377.
Dawson IK, van Breugel P, Coe R, Kindt R, van Zonneveld M, Lilleso JPB, Graudal L, Muchugi A, Russell J, Jamnadass R.  2017.  A meta-analysis of molecular marker genetic datasets for eastern Africa trees supports the utility of potential natural vegetation maps for planning climate-smart restoration initiatives. Tree Genetics and Genomes. 13:ArticleNo.71.
De la Fuente Canto C, Kalogiros DI, Ptashnyk M, George TS, Waugh R, Bengough AG, Russell J, Dupuy LX.  2018.  Morphological and genetic characterisation of the root system architecture of selected barley recombinant chromosome substitution lines using an integrated phenotyping approach. Journal of Theoretical Biology. 447:84-97.
De Meyer SE, Andrews M, James EK, Willems A.  2019.  Mesorhizobium carmichaelinearum sp. nov., isolated from Carmichaelineae spp. root nodules. International Journal of Systematic and Evolutionary Microbiology. 69:146-152.
Delgado-Baquerizo M, Maestre FT, Reich PB, Jeffries TC, Gaitán JJ, Encinar D, Berdugo M, Campbell CD, Singh BK.  2016.  Microbial diversity drives multifunctionality in terrestrial ecosystems. Nature Communications. 7
Demaneche S, Schauser L, Dawson LA, Franqueville L, Simonet P.  2017.  Microbial soil community analyses for forensic science: application to a blind test. Forensic Science International. 270:153-158.
Demars BOL, Kemp JL, Friberg N, Usseglio-Polatera P, Harper DM.  2012.  Macroinvertebrate abundance and proportion of trait categories in river biotopes across England and Wales. PANGEAE database Supplement to: Demars, B.O.L.; Kemp, J.L.; Friberg, N.; Usseglio-Polatera, P.; Harper, D.M. (2012): Linking biotopes to invertebrates in rivers: biological traits, taxonomic composition and diversity. Ecological Indicators.. 23:301-311.
Deng W, Jeng DS, Toorop PE, Squire GR, Iannetta PPM.  2012.  A mathematical model of mucilage expansion in myxospermous seeds of Capsella bursa-pastoris L. Medic (shepherd's purse). Annals of Botany. 109:419-427.
Dennis PG, Sparrow AD, Gregorich EG, Novis P, Elberling B, Greenfield LG, Hopkins DW.  2013.  Microbial responses to carbon and nitrogen supplementation in an Antarctic dry valley soil. Soil Biology and Biochemistry. 25:55-61.
Dittrich R, Butler A, Ball T, Wreford A, Moran D.  2019.  Making real options analysis more accessible for climate change adaptation. An application to afforestation as a flood management measure in the Scottish Borders. Journal of Environmental Management. 245:338-347.
Dixon ER, Blackwell MSA, Dhanoa MS, Berryman Z, de la Fuente Martinez N, Junquera D, Martinez A, Murray PJ, Kemp HF, Meier-Augenstein W et al..  2010.  Measurement at the field scale of soil . Rapid Communications in Mass Spectrometry. 24:511-518.
Dobson G, Shepherd T, Verrall SR, Griffiths DW, Ramsay G, McNicol JW, Davies HV, Stewart D.  2010.  A metabolomics study of cultivated potato (Solanum tuberosum) groups, Andigena, Phureja, Stenotomum and Tuberosum using gas chromatography-mass spectrometry. Journal of Agricultural and Food Chemistry. 58:1214-1223.
van Doorn WG, Beers EP, Dangl JL, Franklin-Tong VE, Gallois P, Hara-Nishimura I, Jones AM, Kawai-Yamada M, Lam E, Mundy J et al..  2011.  Morphological clasification of plant cell deaths. Cell Death and Differentiation. 18:1241-1246.
Driver T, Bajhaiya AK, Allwood JW, Goodacre R, Pittman JK, Dean AP.  2015.  Metabolic responses of eukaryotic microalgae to environmental stress limit the ability of FT-IR spectroscopy for species identification. Algal Research- Biomass Biofuels and Bioproducts. 11:148-155.
Duarte IM, Almeida MTM, Duarte MM, Brown DJF, Neilson R.  2011.  Molecular diagnosis of trichodorid species from Portugal. Plant Pathology. 60:586-594.
Ducreux LJM, Morris WL, Hedley PE, Shepherd T, Davies HV, Millam S, Taylor MA.  2005.  Metabolic engineering of high carotenoid potato tubers containing enhanced levels of beta-carotene and lutein. Journal of Experimental Botany. 56:81-89. Abstract
Dungait JAJ, Ghee C, Rowan JS, McKenzie BM, Hawes C, Dixon ER, Paterson E, Hopkins DW.  2013.  Microbial responses to the erosional redistribution of soil organic carbon in arable fields. Soil Biology and Biochemistry. 60:195-201.
Dupuy LX, Silk WK.  2016.  Mechanisms of early microbial establishment on growing root surfaces. Vadose Zone Journal. 15
Dupuy LX, Mimault M, Patko D, Ladmiral V, Ameduri B, MacDonald MP, Ptashnyk M.  2018.  Micromechanics of root development in soil. Current Opinion in Genetics and Development. 51:18-25.
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Eckersall PD, Lawson FP, Kyle CE, Waterston M, Bence L, Stear MJ, Rhind SM.  2008.  Maternal undernutrition and the ovine acute phase response to vaccination. BMC Veterinary Research, 4:1. 4(1)
Elia M, Swanston JS, Moralejo MA, Casas AM, P AM, Ciudad FJ, Thomas WTB, Smith PL, Ullrich SE, Molina-Cano J-L.  2010.  A model of the genetic differences in malting quality between European and North American barley cultivars based on a QTL study of the cross Triumph x Morex. Plant Breeding. 129:280-290.
Elledge AE, McAlpine CA, Murray PJ, Gordon IJ.  2013.  Modelling habitat preferences of feral pigs for rooting in lowland rainforest. Biological Invasions. 15:1523-1535.
Elliott GN, Thomas N, MacRae M, Campbell CD, Ogden ID, Singh BK.  2012.  Multiplex T-RFLP allows for increased target number and specificity: Detection of Salmonella enterica and six species of Listeria in a single test. PLoS One. 7:e43672.
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Fan F, Yu B, Wang B, George TS, Yin H, Xu D, Li D, Song A.  2019.  Microbial mechanisms of the contrast residue decomposition and priming effect in soils with different organic and chemical fertilization histories. Soil Biology and Biochemistry. 135:213-221.
Fenton B, Margaritopoulos JT, Malloch GL, Foster SP.  2010.  Micro-evolutionary change in relation to insecticide resistance in the peach-potato aphid, Myzus persicae. Ecological Entomology. 35:131-146.
Feuillet C, Langridge P, Waugh R.  2007.  Meeting Report: The Aaronsohn-ITMI International Conference. Israel Journal of Plant Sciences. 55:315-319.
Fischer A, Langers F, Bednar-Friedl B, Geamana N, Skogen K.  2011.  Mental representations of animal and plant species in their social contexts: Results from a survey across Europe. Journal of Environmental Psychology. 31:118-128.
Flemsaeter F, Setten G, Brown KM.  2015.  Morality, mobility and citizenship: Legitimising mobile subjectivities in a contested outdoors. Geoforum. 64:342-350.
Fletcher J, Foster A, Goddard P, McSloy A.  2016.  Managing antler problems in deer. In Practice. 38:513-519.
Flynn KJ, Stoecker DK, Mitra A, Raven JA, Glibert PM, Hansen PJ, Graneli E, Burkholder JM.  2013.  Misuse of the phytoplanktonzooplankton dichotomy: the need to assign organisms as mixotrophs within plankton functional types. Journal of Plankton Research. 35:3-11.
Foito A, Stewart D.  2018.  Metabolomics: A high-throughput screen for biochemical and bioactivity diversity in plants and crops. Current Pharmaceutical Design. 24:2043-2054.
Fowler PA, Cassie S, Rhind SM, Brewer MJ, Collinson JM, Lea RG, Baker PJ, Bhattacharya S, O'Shaughnessy PJ.  2008.  Maternal smoking during pregnancy specifically reduces human fetal desert hedgehog gene expression during testis development. Journal of Clinical Endocrinology and Metabolism. 93:619-626. Abstract
Fowler PA, Cassie S, Rhind BSMMJ, Collinson JM, Lea RG, Baker PJ, Bhattacharya S, O'Shaughnessy PJ.  2008.  Maternal smoking during pregnancy specifically reduces human fetal Desert hedgehog gene expression during testis development. Journal of Clinical Endocrinology and Metabolism. 93(2):619-626.
Fox NJ, Marion G, Davidson RS, White PCL, Hutchings MR.  2013.  Modelling parasite transmission in a grazing system: the importance of host behaviour and immunity. PLoS ONE. 8:e77996.
Frank T, Rohlig RM, Davies HV, Barros E, Engel K.  2012.  Metabolite profiling of maize kernels - genetic modification versus environmental influence. Journal of Agricultural and Food Chemistry. 60:3005-3012.
Frederiksen M, Elston DA, Edwards M, Mann AD, Wanless S.  2011.  Mechanisms of long-term decline in size of lesser sandeels in the North Sea explored using a growth and phenology model. Marine Ecology Progress Series. 432:137-147.
Futter MN, Skeffington RA, Whitehead PG, Moldan F.  2009.  Modelling stream and soil water nitrate dynamics during experimentally increased nitrogen deposition in a coniferous forest catchment at Gardsjon, Sweden. Hydrology Research. 40(2-3):187-197.
Futter MN, Butterfield D, Cosby BJ, Dillon PJ, Wade AJ, Whitehead PJ.  2007.  Modelling the mechanisms that control in-stream dissolved organic carbon dynamics in upland and forested catchments. Water Resources Research, W02424.. 43(2):W02424.
Futter MN, Helliwell RC, Hutchins M, Aherne J.  2009.  Modelling the effects of changing climate and nitrogen deposition on nitrate dynamics in a Scottish mountain catchment. Hydrology Research. 40(2-3):153-166.
Futter MN, Starr FMM, Holmberg M.  2008.  Modelling long-term patterns of dissolved organic carbon concentration in the surface waters of a boreal catchment. Hydrology and Earth System Sciences. 12(2):437-447.
G
Gamado KM, Streftaris G, Zachary S.  2014.  Modelling under-reporting in epidemics. Journal of Mathematical Biology. 69:737-765.
Garcia-Pausas J, Paterson E.  2011.  Microbial community abundance and structure are determinants of soil organic matter mineralisation in the presence of labile carbon. Soil Biology and Biochemistry. 43:1705-1715.
Gibson T, Blok VC, Phillips MS, Hong G, Kumarasinghe D, Riley IT, Dowton M.  2007.  The mitochondrial subgenomes of the nematode Globodera pallida are mosaics: Evidence of recombination in an animal mitochondrial genome. Journal of Molecular Evolution. 64:463-471. Abstract
Gilbert L, Williamson KA, Graves JA.  2012.  Male attractiveness regulates daughter fecundity non-genetically via maternal investment. Proceedings of the Royal Society of London, B.. 279:523-528.
Gilbert L, Williamson KA, Hazon N, Graves JA.  2006.  Maternal effects due to male attractiveness affect offspring development in the zebra finch. Proceedings of the Royal Society of London, B. 273(1595):1765-1771.
Giles CD, Isles PDF, Manley T, Xu YY, Druschel GK, Schroth AW.  2016.  The mobility of phosphorus, iron, and manganese through the sediment-water continuum of a shallow eutrophic freshwater lake under stratified and mixed water-column conditions. Biogeochemistry. 127:15-34.
Gimona A, van der Horst D.  2007.  Mapping hotspots in landscape functionality; a case study on farmland afforestation in Scotland. Landscape Ecology. 22(8):1255-1264.
Giuliano G, Tavazza R, Diretto G, Beyer P, Taylor MA.  2008.  Metabolic engineering of carotenoid biosynthesis in plants. Trends in Biotechnology. 26:139-145. Abstract
Glendell M, Palarea-Albaladejo J, Pohle I, Marrero S, McCreadie B, Cameron G, Stutter MI.  2019.  Modeling the ecological impact of phosphorus in catchments with multiple environmental stressors. Journal of Environmental Quality. 48:1336-1346.
Gomez-Consarnau L, Raven JA, Levine NM, Cutter LS, Wang DL, Seegers B, Aristegui J, Fuhrman JA, Gasol JM, Sanudo-Wilhelmy SA.  2019.  Microbial rhodopsins are major contributors to the solar energy captured in the sea. Science Advances. 5:ArticleNo.eaaw8855.
Gontikaki E, Polymenakou PN, Thornton B, Narayanaswamy BE, Black K, Tselepides A, Witte U.  2012.  Microbial response to organic matter enrichment in the oligotrophic Levantine Basin (Eastern Mediterranean). Geomicrobiology Journal. 29:648-655.
Graham J, Smith K, Tierney I, MacKenzie K, Hackett CA.  2006.  Mapping gene H controlling cane pubescence in raspberry and its association with resistance to cane botyritis and spur blight, rust and cane spot. Theoretical and Applied Genetics. 112:818-831. Abstract
Graham J, Hackett CA, Smith K, Woodhead M, Hein I, McCallum S.  2009.  Mapping QTLs for developmental traits in raspberry from bud break to ripe fruit. Theoretical and Applied Genetics. 118:1143-1155. Abstract
Greenfield LM, Hill PW, Paterson E, Baggs EM, Jones DL.  2018.  Methodological bias associated with soluble protein recovery from soil. Scientific Reports. 8:ArticleNo.11186.
Griffiths BS, Caul S, Thompson J, Birch ANE, Cortet J, Andersen MN, Krogh PH.  2007.  Microbial and microfaunal community structure in cropping systems with genetically modified plants. Pedobiologia. 51:195-206. Abstract
Griffiths BS, Donn S, Neilson R, Daniell TJ.  2006.  Molecular sequencing and morphological analysis of a nematode community. Applied Soil Ecology. 32:325-337. Abstract
Grundy KC, Woodward S, Genney DR, Taylor AFS.  2012.  A molecular approach to explore the extent of the threatened fungus Hypocreopsis rhododendri within wood. Fungal Biology. 116:354-362.
Grzegorczyk M, Husmeier D, Rahnenfuhrer J.  2011.  Modelling non-stationary dynamic gene regulatory processes with the BGM model. Computational Statistics. 26:199-218.
Grzegorczyk M, Husmeier D, Rahnenf J.  2010.  Modelling nonstationary gene regulatory processes. Advances in Bioinformatics. :-749848.
Grzegorczyk M, Husmeier D, Edwards KD, Ghazal P, Millar AJ.  2008.  Modelling non-stationary gene regulatory processes with a non-homogeneous Bayesian network and the allocation sampler. Bioinformatics. 24:2071-2078. Abstract
H
H C, English LC, Halpin C, Andreux F, Hopkins DW.  2006.  Microbial community structure in soils with decomposing residues from plants with genetic modifications to lignin biosynthesis. FEMS Microbiology Letters. 263:68-75. Abstract
Hackett CA, Russell JR, Jorgensen L, Gordon SL, Brennan RM.  2010.  Multi-environment QTL mapping in blackcurrant (Ribes nigrum L.) using mixed models. Theoretical and Applied Genetics. 121:1483-1488.
Hancock RD, Hogenhout S, Foyer CH.  2015.  Mechanisms of plant-insect interaction Preface. Journal of Experimental Botany. 66:421-424.
Hansen BB, Gamelon M, Albon SD, Lee AM, Stien A, Irvine RJ, Sæther BE, Loe LE, Ropstad E, Veiberg V et al..  2019.  More frequent extreme climate events stabilize reindeer population dynamics. Nature Communications. 10:ArticleNo.1616.
Hardstaff JL, Bulling MT, Marion G, Hutchings MR, White PCL.  2013.  Modelling the impact of vaccination on tuberculosis in badgers. Epidemiology and Infection. 141:1417-1427.
Hargreaves CE, Gregory PJ, Bengough AG.  2009.  Measuring root traits in barley (Hordeum vulgare ssp. vulgare and ssp. spontaneum) seedlings using gel chambers, soil sacs and x-ray microtomography. Plant and Soil. 316:285-297.
Hastings E, Potts T.  2013.  Marine litter: Progress in developing an integrated policy approach in Scotland. Marine Policy. 42:49-55.
He Y, Jones JT, Armstrong MR, Lamberti F, Moens M.  2005.  The mitochondrial genome of Xiphinema americanum sensu stricto (Nematoda: Enoplea):considerable economization in the length and structural features of encoded genes. Journal of Molecular Evolution. 61:819-833. Abstract
van der Heijden G, Bel J, Craig CA, Midwood AJ, Mareschal L, Ranger J, Dambrine E, Legout A.  2018.  Measuring plant-available MG, Ca and K pools in the soil - an isotopic dilution assay. ACS Earth and Space Chemistry. 2:292-313.
van der Heijden GA, Legout A, Midwood AJ, Craig CA, Pollier B, Ranger J, Dambrine E.  2013.  Mg and Ca root uptake and vertical transfer in soils assessed by an in situ ecosystem scale multi-isotopic (26Mg & 44Ca) tracing experiment in a beech stand (Breuil-Chenue, France). Plant and Soil. 369:33-45.
Helliwell RC, Aherne J, Nisbet TR, MacDougall G, Broadmeadow S, Sample J, Jackson-Blake L, Doughty R.  2014.  Modelling the long-term response of stream water chemistry to forestry in Galloway, Southwest Scotland. Ecological Indicators. 37:396-411.
Hewitt RJ, Pera FA, Garcia-Martin M, Gaudry-Sada KH, Hernandez-Jimenez V, Bieling C.  2020.  Mapping adolescents' sense of place and perceptions of change in an urban-rural transition. Environmental Management. 65:334-354.
Hill R, Halamish E, Gordon IJ, Clark M.  2013.  The maturation of biodiversity as a global social-ecological issue and implications for future biodiversity science and policy. Futures. 46:41-49.
Hille S, Graeber D, Kronvang B, Rubaek GH, Onnen N, Molina-Navarro E, Baattrup-Pedersen A, Heckrath GJ, Stutter MI.  2019.  Management options to reduce phosphorus leaching from vegetated buffer strips. Journal of Environmental Quality. 48:322-329.
Hollaway MJ, Beven KJ, Benskin CMH, Collins AL, Evans R, Falloon PD, Forber KJ, Hiscock KM, Kahana R, Macleod CJA et al..  2018.  A method for uncertainty constraint of catchment discharge and phosphorus load estimates. Hydrological Processes. 32:2779-2787.
Hopkins DW, Waite IS, O'Donnell AG.  2011.  Microbial biomass, organic matter mineralization and nitrogen in soils from long-term experimental grassland plots (Palace Leas meadow hay plots, UK). European Journal of Soil Science. 62:95-104.
Hopkins M, Finlayson G, Duarte C, Whybrow S, Ritz P, Horgan GW, Blundell JE, Stubbs RJ.  2016.  Modelling the associations between fat-free mass, resting metabolic rate and energy intake in the context of total energy balance. International Journal of Obesity. 40:312-318.
Hurst CH, Turnbull D, Plain F, Fuller W, Hemsley PA.  2017.  Maleimide scavenging enhances determination of protein S-palmitoylation state in acyl-exchange methods. Biotechniques. 62:69-75.
Hyatt M, Gopalakrishnan GS, Bispham J, Gentili S, McMillen IC, Rhind SM, Rae MT, Kyle CE, Brooks AN, Jones C et al..  2007.  Maternal nutrient restriction in early pregnancy programmes hepatic mRNA expression of growth related genes and liver size in adult male sheep. Journal of Endocrinology. 192(1):87-97.
I
Iavazzo P, Adamo P, Boni M, Hillier S, Zampella M.  2012.  Mineralogy and chemical forms of lead and zinc in abandoned mine wastes and soils: an example from Morocco. Journal of Geochemical Exploration. 113:56-67.
J
de Jesus DS, Oliveira CMG, Roberts D, Blok V, Neilson R, Prior T, Balbino HM, MacKenzie KM, Oliveira RDD.  2016.  Morphological and molecular characterisation of Aphelenchoides besseyi and A. fujianensis (Nematoda: Aphelenchoididae) from rice and forage grass seeds in Brazil. Nematology. 18:337-356.
Jiang N, Leach LJ, Hu X, Potokina E, Jia T, Druka A, Waugh R, Kearsey MJ, Luo ZW.  2008.  Methods for evaluating gene expression from Affymetrix microarray datasets. BMC Bioinformatics. 9:-284. Abstract
Jobarteh ML, McArdle HJ, Holtrop G, Sise EA, Prentice AM, Moore SE.  2017.  mRNA levels of placental iron and zinc transporter genes are upregulated in Gambian women with low iron and zinc status. Journal of Nutrition. 147:1401-1409.
Jones HG.  2007.  Monitoring plant and soil water status: established and novel methods revisited and their relevance to studies of drought tolerance. Journal of Experimental Botany. 58:119-130. Abstract
Jones MA, Williams BA, McNicol JW, Simpson CG, Brown JWS, Harmer SL.  2012.  Mutation of Arabidopsis spliceosomal timekeeper locus 1 causes circadian clock defects. The Plant Cell. 24:4066-4082.
Joynson R, Pritchard L, Osemwekha E, Ferry N.  2017.  Metagenomic analysis of the gut microbiome of the common black slug arion ater in search of novel lignocellulose degrading enzymes. Frontiers in Microbiology. 9:ArticleNo.2181.
K
Kalinina NO, Makarova S, Makhotenko A, Love AJ, Taliansky M.  2018.  The multiple functions of the nucleolus in plant development, disease and stress responses. Frontiers in Plant Science. 9:ArticleNo.132..
Kareem R, Cubillas P, Gluyas J, Bowen L, Hillier S, Greenwell HC.  2017.  Multi-technique approach to the petrophysical characterization of Berea sandstone core plugs (Cleveland Quarries, USA). Journal of Petroleum Science and Engineering. 149:436-455.
Karley AJ, White PJ.  2009.  Moving cationic minerals to edible tissues: potassium, magnesium, calcium (Review). Current Opinion in Plant Biology. 12:291-298. Abstract
Karpouzas DG, Singh BK.  2006.  Microbial degradation of organophosphorus xenobiotics: metabolic pathways and molecular basis. Advances in Microbial Physiology. 51:119-185.
Kaufmann K, Chapman SJ, Campbell CD, Harms H, Hohener P.  2006.  Miniaturized test system for soil respiration induced by volatile pollutants. Environmental Pollution. 140(2):269-278.
Kettle H, Louis P, Holtrop G, Duncan SH, Flint HJ.  2015.  Modelling the emergent dynamics and major metabolites of the human colonic microbiota. Environmental Microbiology. 17:1615-1630.
Kettle H, Holtrop G, Louis P, Flint HJ.  2018.  microPop: Modelling microbial populations and communities in R. Methods in Ecology and Evolution. 9:399-409.
Kikuchi T, Shibuya H, Jones JT.  2005.  Molecular and biochemical characterization of an endo-. Biochemical Journal. 389:117-125. Abstract
Koichi K, Mayer R, Kaur K, Cottrell A, Gordon IJ.  2013.  The management implications of Aboriginal perceptions of feral pigs (Sus scrofa) in Northern Queensland. A case of feral pig management in the Wet Tropics World Heritage Area, Australia. Journal of Australian Indigenous Issues. 16:53-72.
Kok K, Rothman DS, Patel M.  2006.  Multi-scale narratives from an IA perspective: Part I. European and Mediterranean scenario development. Futures. 38(3):261-284.
Kok K, Patel M, Rothman DS, Quaranta G.  2006.  Multi-scale narratives from an IA perspective: Part II. Participatory local scenario development. Futures. 38(3):285-311.
Kragt ME, Robson BJ, Macleod CJA.  2013.  Modellers' roles in structuring integrative research projects. Environmental Modelling and Software. 39:322-330.
Kuster EC, Bierman SM, Klotz S, Kuhn I.  2011.  Modelling the impact of climate and land use change on the geographical distribution of leaf anatomy in a temperate flora. Ecography. 34:507-518.
L
Landl M, Schnepf A, Vanderborght J, Bengough AG, Bauke SL, Lobet G, Bol R, Vereecken H.  2018.  Measuring root system traits of wheat in 2D images to parameterize 3D root architecture models. Plant and Soil. 425:457-477.
Lapierre H, Vazquez-Anon M, Parker D, Dubreuil P, Holtrop G, Lobley GE.  2011.  Metabolism of 2-hydroxy-4-(methylthio)butanoate (HMTBA) in lactating dairy cows. Journal of Dairy Science. 94:1526-1535.
Lees KJ, Quaife T, Artz RRE, Khomik M, Sottocornola M, Kiely G, Hambley G, Hill T, Saunders M, Cowie NR et al..  2019.  A model of gross primary productivity based on satellite data suggests formerly afforested peatlands undergoing restoration regain full photosynthesis capacity after five to ten years. Journal of Environmental Management. 246:594-604.
Lenormand M, Luque S, Langemeyer J, Tenerelli P, Zulian G, Aalders IH, Chivulescu S, Clemente P, Dick J, van Dijk J et al..  2018.  Multiscale socio-ecological networks in the age of information. PLoS ONE. 13:ArticleNo.e02056672.
Li S, Gilbert L, Harrison PA, Rounsevell MDA.  2016.  Modelling the seasonality of Lyme disease risk and the potential impacts of a warming climate within the heterogeneous landscapes of Scotland. Journal of the Royal Society Interface. 13:ArticleNo.20160140.
Liang T, Knappett JA, Leung AK, Bengough AG.  2020.  Modelling the seismic performance of root-reinforced slopes using the finite-element method. Geotechnique. 70:375-391.
Lima RCL, Böcker U, McDougall GJ, Allwood JW, Afseth NK, Wubshet SG.  2021.  Magnetic ligand fishing using immobolized DPP-IV for identification of antidiabetic ligands in lingonberry extract. PLOS ONE. 16:ArticleNo.e0247329.
Lisboa FJG, Peres-Neto PR, Chaer GM, Jesus EC, Mitchell RJ, Chapman SJ, Berbara RLL.  2014.  Much beyond Mantel: bringing Procrustes Association metric to the plant and soil ecologist's toolbox. PLoS ONE. 9:e101238.
Littlewood NA, Dennis P, Pakeman RJ, Woodin SJ.  2006.  Moorland restoration aids the reassembly of associated phytophagous insects. Biological Conservation. 132(3):395-404.
Long DG, Paton JA, Squirrell J, Woodhead M, Hollingsworth PM.  2006.  Morphological, ecological and genetic evidence for distinguishing Anastrophyllum joergensenii Schiffn. and A. alpinum Steph. (Jungermanniopsida: Lophoziaceae). Journal of Bryology. 28:108-117. Abstract
Ludvig A, Weiss G, Sarkki S, Nijnik M, Zivojinovic I.  2018.  Mapping European and forest related policies supporting social innovation for rural settings. Forest Policy and Economics. 97:146-152.
M
Macadam CR, Stockan JA.  2015.  More than just fish food: ecosystem services provided by freshwater insects. Ecological Entomology. 40:113-124.
Macdonald LM, Singh BK, Thomas N, Brewer M, Campbell CD, Dawson LA.  2008.  Microbial DNA profiling by multiplex terminal restriction fragment length polymorphism for forensic examination of soil evidence and the influence of sample condition. Journal Applied Microbiology. 105(3):813-821.
Macleod CJA, Haygarth PM, Blackstock KL.  2008.  Mechanisms to improve integrative research at the science-policy interface for sustainable catchment management. Ecology and Society. 13(2):art48.
Madsen LH, Tirichine L, Jurkiewicz A, Sullivan JT, Heckmann AB, Bek AS, Ronson CW, James EK, Stougaard J.  2010.  The molecular network governing nodule organogenesis and infection in the model legume Lotus japonicus. Nature Communications. 1:-10.
Malloch G, Highet F, Kasprowicz L, Pickup J, Neilson R, Fenton B.  2006.  Microsatellite marker analysis of peach-potato aphids (Myzus persicae, Homoptera: Aphididae) from Scottish suction traps. Bulletin of Entomological Research. 96:573-582. Abstract

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.