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Cockell CS, Raven JA.  2007.  Ozone and life on the Archaean earth. Philosophical Transactions of the Royal Society A - Mathematical Physical and Engineering Sciences. 365:1889-1901. Abstract
Michael G, Bahri-Esfahani J, Li QW, Rhee YJ, Wei Z, Fomina M, Liang XJ.  2014.  Oxalate production by fungi: significance in geomycology, biodeterioration and bioremediation. Fungal Biology Reviews. 28:36-55.
Clark KE, Hartley SE, Brennan RM, MacKenzie K, Johnson SN.  2012.  Oviposition and feeding behaviour by the vine weevil Otiorhynchus sulcatus on red raspberry: effects of cultivars and plant nutritional status. Agricultural and Forest Entomology. 14:157-163.
Orskov ER, Anchang KY, Subedi M, Smith J.  2014.  Overview of holistic application of biogas for small scale farmers in Sub-Saharan Africa. Biomass and Bioenergy. 70:4-16.
Mitchell RJ, Keith AM, Potts JM, Ross J, Reid E, Dawson LA.  2012.  Overstory and understory vegetation interact to alter soil community composition and activity. Plant and Soil. 352:65-84.
Evans CD, Peacock M, Baird AJ, Artz RRE, Burden A, Callaghan N, Chapman PJ, Cooper HM, Coyle M, Craig E et al..  2021.  Overriding importance of water table in the greenhouse gas balance of managed peatlands. Nature. Published online.
Alday JG, Cox ES, Pakeman RJ, Harris MP, Le Duc MG, Marrs RH.  2013.  Overcoming resistance and resilience of an invaded community is necessary for effective restoration: a multi-site bracken control study. Journal of Applied Ecology. 50:156-167.
Dobson P, Graham J, Stewart D, Brennan RM, Hackett CA, McDougall GJ.  2012.  Over-seasons analysis of quantitative trait loci affecting phenolic content and antioxidant capacity in raspberry. Journal of Agricultural and Food Chemistry. 60:5360-5366.
Holland J, Brown JL, MacKenzie K, Neilson R, Piras S, McKenzie BM.  2021.  Over winter cover crops provide yield benefits for spring barley and maintain soil health in northern Europe. European Journal of Agronomy. 130:ArticleNo.126363.
Hemsley PA.  2017.  An outlook on protein S-acylation in plants: what are the next steps? Journal of Experimental Botany. 68:3155-3164.
Currie M, Colley K, Irvine KN.  2021.  Outdoor recreation for older adults in Scotland: qualitatively exploring the multiplicity of constraints to participation. International Journal of Environmental Research and Public Health. 18:ArticleNo.7705.
Kiiker R, Hansen M, Williams IH, Cooke DEL, Runno-Paurson E.  2018.  Outcome of sexual reproduction in the Phytophthora infestans population in Estonian potato fields. European Journal of Plant Pathology. 152:395-407.
Regnier T, Augley J, Devalla S, Robinson CD, Wright P, J, Wright F.  2017.  Otolith chemistry reveals seamount fidelity in a deepwater fish. Deep-Sea Research, Part I. 121:183-189.
Toorop PE, Herrera Ballester M, Deng W, Iannetta PPM.  2011.  Osmotic stress tolerance of Capsella bursa-pastoris seeds contributes to bet-hedging in arable fields. Association of Applied Biologists - Agricultural Ecology Research: It's Role in Delivering Sustainable Farm Systems, Dundee, 15-16 June 2011. Aspects of Applied Biology. 109:39-40.
Yan X, De Clercq P, Han R, Jones JT, Chen S, Moens M.  2011.  Osmotic responses of different strains of Steinernema carpocapsae. Nematology. 13:845-851.
Raven J.  2020.  Origin of the roles of potassium in biology. Bioessays. :ArticleNo.e20000302.
Larson BMH, van der Wal R, Fischer A, Selge S.  2017.  Origin might matter; people matter, too. A response to the comment by Rejmanek and Simberloff, 2016. Environmental Conservation. 44:100-101.
Torrance L, Ziegler A, Pittman H, Paterson M, Toth R, Eggleston I.  2006.  Oriented immobilisation of engineered single-chain antibodies to develop biosensors for virus detection. Journal of Virological Methods. 134:164-170. Abstract
Singh BK.  2009.  Organophosphorus degrading bacteria: ecology and industrial applications. Nature Review Microbiology. 7(2):156-164.
Torres GA, Gong Z, Iovene M, Hirsch C, Buell CR, Bryan GJ, Novak P, Macas J, Jiang J.  2011.  Organization and evolution of subtelomeric satellite repeats in the potato genome. Genes Genomes Genetics. 1:85-92.
Schimmelrnann A, Qi HP, Coplen TB, Brand WA, Fong J, Meier-Augenstein W, Kemp HF, Toman B, Ackermann A, Assonov S et al..  2016.  Organic reference materials for hydrogen, carbon, and nitrogen stable isotope-ratio measurements: caffeines, n-alkanes, fatty acid methyl esters, glycines, L-valines, polyethylenes, and oils. Analytical Chemistry. 88:4294-4302.
George TS, Giles CD, Menezes-Blackburn D, Condron LM, Gama-Rodrigues AC, Jaisi D, Lang F, Neal AL, Stutter MI, Almeida DS et al..  2018.  Organic phosphorus in the terrestrial environment: a perspective on the state of the art and future priorities. Plant and Soil. 427:191-208.
George TS, Giles CD, Menezes-Blackburn D, Condron LM, Gama-Rodrigues AC, Jaisi D, Lang F, Neal AL, Stutter MI, Almeida DS et al..  2018.  Organic phosphorus in the terrestrial environment: a perspective on the state of the art and future priorities. Plant and Soil. 427:191-208.
Sjogersten S, Caul S, Daniell TJ, Jurd APS, O'Sullivan OS, Stapleton CS, Titman JJ.  2016.  Organic matter chemistry controls greenhouse gas emissions from permafrost peatlands. Soil Biology and Biochemistry. 98:42-53.
Carvalho A, Ribeiro H, Mayes R, Guedes A, Abreu I, Noronha F, Dawson LA.  2013.  Organic matter characterization of sediments in two river beaches from Northern Portugal for forensic application. Forensic Science International. 233:403-415.
Richardon A, George T, Hens M, Delhaize E, Ryan P, Simpon R, Hocking P.  2022.  Organic anions facilitate the mobilization of soil organic phosphorus and enhances its subsequent lability to phosphatases. Plant and Soil.
McNeilly TN, Mitchell MC, Corbishley A, Nath M, Simmonds H, McAteer SP, Mahajan A, Low JC, Smith DGE, Huntley JF et al..  2015.  Optimizing the protection of cattle against Escherichia coli O157:H7 colonization through immunization with different combinations of H7 Flagellin, Tir, Intimin-531 or EspA. PLoS ONE. 10:e0128391.
Singh K, Aitkenhead MJ, Fidelis C, Yinil D, Sanderson T, Snoeck D, Field DJ.  2021.  Optimization of spectral pre-processing for estimating soil conditions on small farms. Soil Use and Management.
Zuber T, Holm D, Byrne P, Ducreux L, Taylor M, Kaiser M, Stushnoff C.  2015.  Optimization of in vitro inhibition of HT-29 colon cancer cell cultures by Solanum tuberosum L. extracts. Food and Function. 6:72-83.
Graham NS, Broadley MR, Hammond JP, White PJ, May ST.  2007.  Optimising the analysis of transcript data using high density oligonucleotide arrays and genomic DNA-based probe selection. BMC Genomics. 8:-344. Abstract
Campbell R, Morris WL, Misawa N, Ducreux LJM, Morris JA, Hedley PE, Fraser PD, Taylor MA.  2015.  Optimising ketocarotenoid production in potato tubers: effect of genetic background, transgene combinations and environment. Plant Science. 234:27-37.
Smith SW, Vandenberghe C, Johnson D, Pakeman RJ, van der Wal R, Woodin SJ.  2013.  Optimising carbon storage within a spatially heterogeneous upland grassland through sheep grazing management. Ecosystems. 17:418-429.
Black K, Tziboula-Clarke A, White PJ, Iannetta PPM, Walker G.  2021.  Optimised processing of faba bean (Vicia faba L.) kernels as a brewing adjunct. Journal of the Institute of Brewing. 127:13-20.
Holmes A, Birse L, Jackson RW, Holden NJ.  2014.  An optimised method for the extraction of bacterial mRNA from plant roots infected with Escherichia coli O157:H7. Frontiers in Microbiology Research. 5
Richards M, McDonald AJS, Aitkenhead MJ.  2008.  Optimisation of competition indices using simulated annealing and artificial neural networks. Ecological Modelling. 214(2-4):375-384.
Menezes-Blackburn D, Giles C, Darch T, George TS, Blackwell M, Stutter MI, Shand CA, Lumsdon D, Cooper P, Wendler R et al..  2018.  Opportunities for mobilizing recalcitrant phosphorus from agricultural soils: a review. Plant and Soil. 427:5-16.
Veneklaas EJ, Lambers H, Bragg J, Finnegan PM, Lovelock CE, Plaxton WC, Price C, Scheible W, Shane MW, White PJ et al..  2012.  Opportunities for improving phosphorus-use efficiency in crop plants. New Phytologist. 195:306-320.
Dimitrova-Petrova K, Geris J, Wilkinson ME, Rosolem R, Verrot L, Lilly A, Soulsby C.  2020.  Opportunities and challenges in using catchment-scale storage estimates from cosmic ray neutron sensors for rainfall-runoff modelling. Journal of Hydrology. 586:ArticleNo.124878.
Nijnik M, Slee B, Pajot G.  2011.  Opportunities and challenges for terrestrial carbon offsetting and marketing, with some implications for forestry in the UK. South and East European Journal of Forestry (SEEFOR). 1:69-79.
McVittie A, Norton L, Martin-Ortega J, Siameti I, Glenk K, Aalders IH.  2015.  Operationalizing an ecosystem services-based approach using Bayesian Belief Networks: An application to a riparian buffer zone. Ecological Economics. 110:15-27.
Blackstock KL, Carter CE.  2007.  Operationalising sustainability science for a sustainability directive? Reflecting on three pilot projects Geographical Journal. 173(4):343-357.
Smith RI, Barton DN, Dick J, Haines-Young R, Madsen AL, Rusch GM, Termansen M, Woods H, Carvalho L, Giuca RC et al..  2017.  Operationalising ecosystem service assessment in bayesian belief networks: Experiences within the OpenNESS project. Ecosystem Services. 29:452-464.
Smith RI, Barton DN, Dick J, Haines-Young R, Madsen AL, Rusch GM, Termansen M, Woods H, Carvalho L, Giuca RC et al..  2018.  Operationalising ecosystem service assessment in bayesian belief networks: Experiences within the OpenNESS project. Ecosystem Services. 29:452-464.
Bartlett L, Montague G, McNamara G, Davies B, Fiore A, Sturrock K, Ledbetter M, Hein I, Mantelin S, Harrower B et al..  2020.  Operational considerations for hot-washing in potato crisp manufacture. Food and Bioproducts Processing. 124:387-396.
Beale CM, Lennon JJ, Gimona A.  2008.  Opening the climate envelope reveals no macroscale associations with climate in European birds. Proceedings of the National Academy of Sciences, USA. 105:14908-14912.
Day-Stirrat RJ, Milliken KL, Dutton SP, Loucks RG, Hillier S, Aplin AC, Schleicher AM.  2010.  Open-system chemical behavior in deep Wilcox Group mudstones, Texas Gulf. Marine and Petroleum Geology.. 27(9):1804-1818.
Polhill JG, Edmonds B.  2007.  Open access for social simulation. Journal of Artificial Societies and Social Simulation. 10(3):10.
Boevink PC, McLellan H, Gilroy EM, Naqvi S, He Q, Yang LN, Wang XD, Turnbull D, Armstrong MR, Tian ZD et al..  2016.  Oomycetes seek help from the plant: Phytophthora infestans effectors target host susceptibility factors. Molecular Plant. 9:636-638.
Birch PRJ, Boevink P, Gilroy E, Hein I, Pritchard L, Whisson SC.  2008.  Oomycete RXLR effectors: delivery, functional redundancy and durable disease resistance. Current Opinion in Plant Biology. 11:373-379. Abstract
Wang HX, He H, Qi YT, McLellan H, Tian ZJ, Birch PRJ, Tian ZD.  2019.  The oomycete microbe-associated molecular pattern Pep-13 triggers SERK3/BAK1-independent plant community. Plant Cell Reports. 38:173-182.
Lamour KH, Stam R, Jupe J, Huitema E.  2012.  The oomycete broad-host-range pathogen Phytophthora capsici. Molecular Plant Pathology. 13:329-337.
Polhill JG, Gotts NM.  2009.  Ontologies for transparent integrated human-natural system modelling. Landscape Ecology. 24(9):1255-1267.
Senn J, Mills J, L. Walsh C, Addy S, Peppa M.  2022.  Onsite geometric calibration of RPAS mounted sensors for SfM photogrammetric geomorphological surveys. Earth Surface Processes and Landforms..
Mei Y, Thorpe P, Guzha A, Haegeman A, Blok VC, MacKenzie K, Gheysen G, Jones JT, Mantelin S.  2015.  Only a small subset of the SPRY domain gene family in Globodera pallida is likely to encode effectors, two of which suppress host defences induced by the potato resistance gene Gpa2. Nematology. 17:409-424.
Thonur L, Maley M, Gilray J, Crook T, Laming E, Turnbull D, Nath M, Willoughby K.  2012.  One-step multiplex real time RT-PCR for the detection of bovine respiratory syncytial virus, bovine herpesvirus 1 and bovine parainfluenza virus 3. BMC Veterinary Research. 8:37-37.
Rajala A, Peltonen-Sainio P, Jalli M, Jauhiainen L, Hannukkala A, Tenhola-Roininen T, Ramsay L, Manninen O.  2017.  One century of Nordic barley breeding: nitrogen use efficiency, agronomic traits and genetic diversity. Journal of Agricultural Science. 155:582-598.
Manfreda S, McCabe ME, Miller PE, Lucas R, Madrigal VP, Mallinis G, Dor E, Helman D, Estes L, Ciraolo G et al..  2018.  On the use of unmanned aerial systems for environmental monitoring. Remote Sensing. 10:ArticleNo.641.
Manfreda S, McCabe ME, Miller PE, Lucas R, Madrigal VP, Mallinis G, Dor E, Helman D, Estes L, Ciraolo G et al..  2018.  On the use of unmanned aerial systems for environmental monitoring. Remote Sensing. 10:ArticleNo.641.
Lowassa A, Tadie D, Fischer A.  2012.  On the role of women in bushmeat hunting - insights from Tanzania and Ethiopia. Journal of Rural Studies. 28:622-630.
Guilioni L, Jones HG, Leinonen I, Lhomme JP.  2008.  On the relationships between stomatal resistance and leaf temperatures in thermography. Agricultural and Forest Meteorology. 148:1908-1912.
Fischer A, Sandstrom C, Delibes-Mateos M, Arroyo B, Tadie D, Randall D, Hailu F, Lowassa A, Mshua M, Kerezi V et al..  2013.  On the multifunctionality of hunting - an institutional analysis of eight cases from Europe and Africa. Journal of Environmental Planning and Management. 56:531-552.
Hillier S, Marwa E, Rice C.  2013.  On the mechanism of exfoliation of "Vermiculite". Clay Minerals. 48:563-582.
Fischer A, Wakjira TD, Weldesemaet YT, Ashenafi ZT.  2014.  On the interplay of actors in the co-management of natural resources - a dynamic perspective. Journal of Environmental Management. 64:158-168.
Negri C, Chiaradia E, Rienzner M, Mayer A, Gandolfi C, Romani M, Facchi A.  2020.  On the effects of winter flooding on the hydrological balance of rice areas in northern Italy. Journal of Hydrology. 590:ArticleNo.125401..
Cayuela-Sanchez JA, Palarea-Albaladejo J, Garcia-Martin JF, Perez-Camino MC.  2019.  Olive oil nutritional labeling by using Vis/NIR spectroscopy and compositional statistical methods. Innovative Food Science and Emerging Technologies. 51:139-147.
Matthews KB, Renner A, Blackstock KL, Waylen KA, Miller DG, Wardell-Johnson DH, Juarez-Bourke A, Cadillo-Benalcazar J, Schyns JF, Giampietro M.  2021.  Old wine in new bottles: exploiting data from the EU’s Farm Accountancy Data Network for Pan-EU sustainability assessments of agricultural production systems. Sustainability. 13:ArticleNo.10080.
Stark LA, Taliansky ME.  2008.  Old and new faces of the nucleolus. Workshop on the nucleolus and disease. EMBO Reports. 10:35-40. Abstract
Faoro H, Menegazzo RR, Battistoni F, Gyaneshwar P, do Amaral FP, Taulé C, Rausch S, Galvão PG, de los Santos C, Mitra S et al..  2017.  The oil-contaminated soil diazotroph Azoarcus olearius DQS-4T if genetically and phenotypically similar to the model grass endophyte Azoarcus sp. BH72. Environmental Microbiology Reports. 9:223-238.
Faoro H, Menegazzo RR, Battistoni F, Gyaneshwar P, do Amaral FP, Taulé C, Rausch S, Galvão PG, de los Santos C, Mitra S et al..  2017.  The oil-contaminated soil diazotroph Azoarcus olearius DQS-4T if genetically and phenotypically similar to the model grass endophyte Azoarcus sp. BH72. Environmental Microbiology Reports. 9:223-238.
Sutherland LA, Darnhofer I.  2012.  Of organic farmers and "good farmers": changing habitus in rural England. Journal of Rural Studies. 28:232-240.
Polhill JG.  2010.  ODD updated. Journal of Artificial Societies and Social Simulation.. 13(4):9.
Grimm V, Berger U, DeAngelis DL, Polhill JG, Giske J, Railsback SF.  2010.  The ODD protocol for describing individual-based and agent-based models: A first update. Ecological Modelling. 221(23):2760-2768.
Grimm V, Railsback SF, Vincenot C, Berger U, Gallagher C, DeAngelis DL, Edmonds B, Ge J, Giske J, Groeneveld J et al..  2020.  The ODD protocol for describing agent-based and other simulation models: a second update to improve clarity, replication, and structural realism. Journal of Artificial Societies and Social Simulation. 23:ArticleNo.7.
Potts T, O'Higgins T, Hastings E.  2012.  Oceans of opportunity or stormy seas? What does the future hold for developments in European marine policy Philosophical Transactions of the Royal Society of London, A.. 370:5682-5700.
Leles SG, Mitra A, Flynn KJ, Stoecker DK, Hansen PJ, Calbet A, McManus GB, Sanders RW, Caron DA, Not F et al..  2017.  Oceanic protists with different forms of acquired phototrophy display contrasting biogeographies and abundance. Proceedings of the Royal Society B, Biological Sciences. 284:ArticleNo.1860.
Burns VA.  2019.  Oceanic embodiments: living ENSO events in coastal TImor-Leste. Political Geography. 70:102-116.
Hurd CL, Beardall J, Comeau S, Cornwall CE, Havenhand JN, Munday PL, Parker LM, Raven JA, McGraw CM.  2020.  Ocean acidification as a multiple driver: how interactions between changing seawater carbonate parameters affect marine life. Marine and Freshwater Research. 781:263-274.
Qian MR, Wu HZ, Wang JM, Zhang H, Zhang ZL, Zhang YZ, Lin H, Ma JW.  2016.  Occurrence of trace elements and antibiotics in manure- based fertilizers from the Zhejiang Province of China. Science of the Total Environment. 559:174-181.
Tzortzakakis EA, Adam MAM, Blok VC, Paraskevopoulos C, Bourtzis K.  2005.  Occurrence of resistance-breaking populations of root-knot nematodes on tomato in Greece. European Journal of Plant Pathology. 113:101-105. Abstract
Gontikaki E, Thornton B, Cornulier T, Witte U.  2015.  Occurrence of priming in the degradation of lignocellulose in marine sediments. PLoS ONE. 10:e0143917.
Were HK, Kabira JN, Kinyua ZM, Olubayo FM, Karinga JK, Aura J, Lees AK, Cowan GH, Torrance L.  2013.  Occurrence and distribution of potato pests and diseases in the major potato growing areas in Kenya. Potato Research. 56:325-342.
Qian B, Gregorich EG, Gameda S, Hopkins DW, Wang XL.  2011.  Observed soil temperature trends associated with climate change in Canada. Journal of Geophysical Research. 116:16pp.
Boag B, Hernandez A, Cattadori IM.  2013.  Observations on the epidemiology and interactions between myxomatosis, coccidiosis and helminth parasites in a wild rabbit population in Scotland. European Journal of Wildlife Research. 59:557-562.
Colas I, Darrier B, Arrieta M, Mittmann SU, Ramsay L, Sourdille P, Waugh R.  2017.  Observation of extensive chromosome axis remodeling during the "diffuse-phase" of meiosis in large genome cereals. Frontiers in Plant Science. 8:ArticleNo.1235.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.