Skip to navigation Skip to content

Publications list

Found 446 results

Filters: First Letter Of Title is P  [Clear All Filters]
A B C D E F G H I J K L M N O [P] Q R S T U V W X Y Z   [Show ALL]
P
Zhang T, Zhao X, Jiang L, Yang X, Chen Y, Song X, Lu Y, Peng J, Zheng H, Wu Y et al..  2018.  p15 encoded by Garlic virus X is a pathogenicity factor and RNA silencing suppressor. Journal of General Virology. 99:1515-1521.
Davies AL.  2012.  Palaeo-environments and human experience. Archaeological Dialogues. 19:51-54.
Moore BD, Lawer IR, Wallis IR, Beale CM, Foley WJ.  2010.  Palatability mapping: a koala's eye view of spatial variation in habitat quality. Ecology. 91(11):3165-3176.
Shyntum DY, Theron J, Venter SN, Moleleki LN, Toth IK, Coutinho TA.  2015.  Pantoea ananatis utilizes a type VI secretion system for pathogenesis and bacterial competition. Molecular Plant-Microbe Interactions. 28:420-431.
Mavima L, Beukes CW, Palmer M, De Meyer SE, James EK, Maluk M, Gross E, Bueno dos Reis Junior F, Avontuur JR, Chan WY et al..  2021.  Paraburkholderia youngii sp. nov. and 'Paraburkholderia atlantica' - Brazilian and Mexican Mimosa-associated rhizobia that were previously known as Paraburkholderia tuberum sv. Mimosae. Systematic and Applied Microbiology. 44:ArticleNo.126152.
Orr JN, Neilson R, Freitag TE, Roberts DM, Davies KG, Blok VC, Cock PJA.  2020.  Parallel mircrobial ecology of pasteuira and nematode species in Scottish soils. Frontiers in Plant Science. 10:ArticleNo.1763.
Marion G, McInerny GJ, Pagel J, Catterall S, Cook AR, Hartig F, O'Hara RB.  2012.  Parameter and uncertainty estimation for process-oriented population and distribution models: data, statistics and the niche. Journal of Biogeography. 39:2225-2239.
Irvine RJ.  2007.  Parasites and the dynamics of wild mammal populations. Animal Science. 82(6):775-781.
Blok VC, Jones JT, Phillips MS, Trudgill DL.  2008.  Parasitism genes and host range disparities in biotrophic nematodes: the conundrum of polyphagy versus specialism. Bioessays. 30:249-259. Abstract
Leckie FM, Arroyo B, Redpath SM, Thirgood SJ.  2008.  Parental differences in brood provisioning by Hen Harriers Circus cyaneus. Bird Study. 55(2):209-215.
Munoz-Tamayo R, Agudelo JFR, Dewhurst RJ, Miller G, Vernon T, Kettle H.  2019.  A parsimonious software sensor for estimating the individual dynamic pattern of methane emissions from cattle. Animal. 13:1180-1187.
Arnold MFF, Haag AF, Capewell S, Boshoff HI, James EK, McDonald R, Mair I, Mitchell AM, Kerscher B, Mitchell TJ et al..  2013.  Partial complementation of Sinorhizobium meliloti bacA mutant phenotypes by the Mycobacterium tuberculosis BacA protein. Journal of Bacteriology. 195:389-398.
McGavin WJ, Cock PJA, MacFarlane SA.  2011.  Partial sequence and RT-PCR diagnostic test for the plant rhabdovirus Raspberry vein chlorosis virus. Plant Pathology. 60:462-467.
Waylen KA, Blackstock KL, Marshall K, Dunglinson J.  2015.  Participation-prescription tension in natural resource management: the case of diffuse pollution in Scottish water management. Environmental Policy and Governance. 25:111-124.
Blackstock KL, Dinnie L, Dilley R, Marshall K, Dunglinson J, Trench H, Harper K, Finan K, MacPherson J, Johnston E et al..  2015.  Participatory research to influence participatory governance: managing relationships with planners. Area. 47:254-260.
Brown I, Martin-Ortega J, Waylen KA, Blackstock KL.  2016.  Participatory scenario planning for developing innovation in community adaptation responses: three contrasting examples from Latin America. Regional Environmental Change. Published online.
Brown I, Martin-Ortega J, Waylen KA, Blackstock KL.  2016.  Participatory scenario planning for developing innovation in community adaptation responses: three contrasting examples from Latin America. Regional Environmental Change. 16:1685-1700.
Oteros-Rozas E, Martín-López B, Daw TM, Bohensky E, Butler J, Hill R, Martin-Ortega J, Quinlan A, Ravera F, Ruiz-Mallén I et al..  2015.  Participatory scenario-planning in place-based social-ecological research: insights and experiences from 23 case studies. Ecology and Society. 20:ArticleNo.34.
Msoffe F, Ogoto J, Bedelian C, Said M, Kifugo S, Reid R, Kaaya J, Neselle M, van Gardingen P, Thirgood SJ.  2010.  Participatory wildlife surveys in communal lands: a case study from Simanjiro, Tanzania. African Journal of Ecology. 8(3):727-735.
Michalet R, Schoeb C, Lortie CJ, Brooker RW, Callaway RM.  2014.  Partitioning net interactions among plants along altitudinal gradients to study community responses to climate change. Functional Ecology. 28:75-86.
Liu XB, Burslem DFRP, Taylor JD, Taylor AFS, Khoo E, Majalap-Lee N, Helgason T, Johnson D.  2018.  Partitioning of soil phosphorus among arbuscular and ectomycorrhizal trees in tropical and subtropical forests. Ecology Letters. 21:713-723.
Millard P, Midwood AJ, Hunt JE, Whitehead D, Boutton T.  2008.  Partitioning soil surface CO2 efflux into autotrophic and heterotrophic components, using natural gradients in soil &13C in an undisturbed savannah soil. Soil Biology and Biochemistry. 40(7):1575-1582.
Garnett MH, Hartley IP, Hopkins DW, Sommerkorn M, Wookey PA.  2009.  A passive sampling method for radiocarbon analysis of soil respiration using molecular sieve. Soil Biology & Biochemistry. 41:1450-1456. Abstract
Garnett MH, Hartley IP, Hopkins DW, Sommerkorn M, Wookey PA.  2009.  A passive sampling method for radiocarbon analysis of soil respiration using molecular sieve. Soil Biology and Biochemistry. 41(7):1450-1456.
Helliwell RC, Aherne J, MacDougall G, Nisbet TR, Lawson D, Cosby BJ, Evans CD.  2014.  Past acidification and recovery of surface waters, soils and ecology in the United Kingdom: Prospects for the future under current deposition and land use protocols. Ecological Indicators. 37:381-395.
Norman RA, Worton AJ, Gilbert L.  2016.  Past and future perspectives on mathematical models of tick-borne pathogens. Parasitology. 143:850-859.
Lupolova N, Dallman TJ, Holden NJ, Gally DL.  2017.  Patchy promiscuity: machine learning applied to predict the host specificity of Salmonella enterica and Escherichia coli. Microbial Genomics, 3, (Open Access).
Arnold KE, Gilbert L, Gorman HE, Griffiths KJ, Adam A, Nager RG.  2016.  Paternal attractiveness and the effects of differential allocation of parental investment. Animal Behaviour. 113:69-78.
Thilliez GJA, Armstrong MR, Lim TY, Baker K, Jouet A, Ward B, van Oosterhout C, Jones JDG, Huitema E, Birch PRJ et al..  In Press.  Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes. New Phytologist. Published online..
Thilliez GJA, Armstrong MR, Lim TY, Baker K, Jouet A, Ward B, van Oosterhout C, Jones JDG, Huitema E, Birch PRJ et al..  2019.  Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes. New Phytologist. 221:1634-1648.
Abang M, Baum M, Ceccarelli S, Grando S, Linde CC, Yahyaoui AH, Zhan J, McDonald BA.  2006.  Pathogen evolution in response to host resistance genes: Evidence from field experiments with Rhynchosporium secalis on barley. Phytopathology. 96:S2-S2.
Chianini F, Siso S, Ricci E, Eaton SL, Finlayson J, Pang Y, Hamilton S, Steele P, Reid HW, Cantile C et al..  2013.  Pathogenesis of scrapie in ARQ/ARQ sheep after subcutaneous infection: Effect of lymphadenectomy and immune cell subset changes in relation to prion protein accumulation. Veterinary Immunology and Immunopathology. 152:348-358.
Newton AC, Fitt BDL, Atkins SD, Walters DR, Daniell TJ.  2010.  Pathogenesis, parasitism and mutualism in the trophic space of microbe-plant interactions. Trends in Microbiology. 18:365-373.
Chase-Topping ME, Rosser T, Allison LJ, Courcier, Evans J, McKendrick IJ, Pearce MC, Handel I, Caprioli A, Karch H et al..  2012.  Pathogenic potential to humans of bovine Escherichia coli O26, Scotland. Emerging Infectious Diseases. 18:439-448.
Winward GP, Avery LM, Stephenson T, Jeffrey P, Le Corre KS, Fewtrell L, Jefferson B.  2009.  Pathogens in urban wastewaters suitable for reuse. Urban Water Journal. 6(4):291-301.
Winward GP, Avery LM, Stephenson T, Jeffrey P, Le Corre KS, Fewtrell L, Jefferson B.  2009.  Pathogens in urban wastewaters suitable for reuse. Urban Water Journal. 6(4):291-301.
Marselle MR, Hartig T, Cox DT, de Bell S, Knapp S, Lindley S, Triguero-Mas M, Bohning-Gaese K, Braubach M, Cook PA et al..  2021.  Pathways linking biodiversity to human health: A conceptual framework. Environment International. 150:ArticleNo.106420.
Ehlers MH, Sutherland LA.  2016.  Patterns of attention to renewable energy in the British farming press from 1980 to 2013. Renewable and Sustainable Energy Reviews. 54:959-973.
Ding Z, Feeley KJ, Wang Y, Pakeman RJ, Ding P.  2013.  Patterns of bird functional diversity on land-bridge island fragments. Journal of Animal Ecology. 82:781-790.
Stamati K, Hollingsworth PM, Russell JR.  2007.  Patterns of clonal diversity in three species of sub-arctic willow (Salix lanata, Salix lapponum and Salix herbacea). Plant Systematics and Evolution. 269:75-88. Abstract
Liu Z, Bos JIB, Armstrong MR, Whisson SC, da Cunha L, Torto-Alalibo T, Win J, Avrova AO, Wright F, Birch PRJ et al..  2005.  Patterns of diversifying selection in the phytotoxin-like scr74 gene family of Phytophthora infestans. Molecular Biology and Evolution. 22:659-672. Abstract
Yahiaoui S, Igartua E, Moralejo M, Ramsay L, Molina-Cano J-L, Ciudad FJ, Lasa JM, Gracia MP, Casas AM.  2008.  Patterns of genetic and eco-geographical diversity in Spanish barleys. Theoretical and Applied Genetics. 116:271-282. Abstract
Comadran J, Thomas WTB, van Eeuwijk FA, Ceccarelli S, Grando S, Stanca AM, Pecchioni N, Akar T, Al-Yassin A, Benbelkacem A et al..  2009.  Patterns of genetic diversity and linkage disequilibrium in a highly structured Hordeum vulgare association-mapping population for the Mediterranean basin. Theoretical and Applied Genetics. 119:175-187.
Comadran J, Ramsay L, MacKenzie K, Hayes P, Close TJ, Muehlbauer G, Stein N, Waugh R.  2011.  Patterns of polymorphism and linkage disequilibrium in cultivated barley. Theoretical and Applied Genetics. 122:523-531.
Ramsay G, Griffiths DW, Deighton N.  2005.  Patterns of solanidine glycoalkaloid variation in four gene pools of the cultivated potato. Genetic Resources and Crop Evolution. 51:805-813. Abstract
Martin-Ortega J, Ojea E, Roux C.  2013.  Payments for Water Ecosystem Services in Latin America: a literature review and conceptual model. Ecosystem Services. 6:122-132.
van der Linde S, Alexander IJ, Anderson IC.  2008.  A PCR-based method for detecting the mycelia of stipitate hydnoid fungi in soil. Journal of Microbiological Methods. 75(1):40-46.
Andersen R, Rochefort L, Poulin M.  2010.  Peat, water and plant tissue chemistry monitoring: A seven-year case-study in a restored peatland. Wetlands. 30(1):159-170.
Sloan TJ, Payne RJ, Anderson AR, Bain C, Chapman S, Cowie N, Gilbert P, Lindsay R, Mauquoy D, Newton AJ et al..  2019.  Peatland afforestation in the UK and consequences for carbon storage. Mires and Peat. 23:ArticleNo.1..
Ross HA, Morris WL, Ducreux LJM, Hancock RD, Verrall SR, Morris JA, Tucker GA, Stewart D, Hedley PE, McDougall GJ et al..  2011.  Pectin engineering to modify product quality in potato. Plant Biotechnology Journal. 9:848-856.
Wang H, Wang Y, Humphris S, Nie W, Zhang P, Wright F, Campbell E, Hu B, Fan J, Toth I.  2021.  Pectobacterium atrosepticum KDPG aldolase, Eda, participates in the Entner-Doudoroff pathway and independently inhibits expression of virulence determinants. Molecular Plant Pathology. 22:271-283.
Pasanen M, Waleron M, Schott T, Cleenwerck I, Misztak A, Waleron K, Pritchard L, Bakr R, Degefu Y, van der Wolf J et al..  2020.  Pectobacterium parvum sp. nov., having a Salmonella SPI-1-like Type III secretion system and low virulence. International Journal of Systematic and Evolutionary Microbiology. 70:2440-2448.
Melo PC.  2017.  People, places and earnings differentials. Regional Studies. 561:389-403.
Suryawanshi KR, Bhatnagar YV, Redpath S, Mishra C.  2013.  People, predators and perceptions: patterns of livestock depredation by snow leopards and wolves. Journal of Applied Ecology. 50:550-560.
Fisher JC, Irvine KN, Bicknell JE, Hayes WM, Fernandes D, Mistry J, Davies ZG.  2021.  Perceived biodiversity, sound, naturalness and safety enhance the restorative quality and wellbeing benefits of green and blue space in a neotropical city. Science of the Total Environment. 755:ArticleNo.143095.
Goddard PJ, Waterhouse A, Dwyer CM, Stott A.  2006.  The perception of the welfare of sheep in extensive systems. Small Ruminant Research. 62(3):215-225.
Fraser MD, Davies DA, Vale JE, Nute GR, Hallett KG, Richardson RI, Wright IA.  2009.  Performance and meat quality of native and continental cross steers grazing ryegrass/white clover improved pasture or semi-natural rough grazing. Livestock Science. 123:70-82.
Wang J, Zhang X, Bengough AG, Crawford JW.  2008.  Performance evaluation of the cell-based algorithms for domain decomposition in flow simulation. International Journal of Numerical Methods for Heat & Fluid Flow. 18:656-672. Abstract
Shortall S, McKee A, Sutherland LA.  2020.  The performance of occupational closure: the case of agriculture and gender. Sociologia Ruralis. 60:40-57.
Hombach-Klonisch S, Danescu A, Begum F, Amezaga MR, Rhind SM, Sharpe RM, Evans NP, Bellingham M, Cotinot C, Mandon-Pepin B et al..  2013.  Peri-conceptional changes in maternal exposure to sewage sludge chemicals disturbs fetal thyroid gland development in sheep. Molecular and Cellular Endocrinology. 367:98-108.
Spezia L, Futter MN, Brewer MJ.  2011.  Periodic multivariate normal hidden Markov models for the analysis of water quality time series. Environmetrics. 22:304-317.
Zetsche E, Bulling MT, Witte U.  2012.  Permeability of intertidal sandflats: Impact of temporal variability on sediment metabolism. Continental Shelf Research. 42:41-50.
Fenton O, Healy MG, Brennan FP, Jahangir MMR, Lanigan GJ, Richards KG, Thornton SF, Ibrahim TG.  2014.  Permeable reactive interceptors - blocking diffuse nutrient and greenhouse gases losses in key areas of the farming landscape. Journal of Agricultural Science. 152:S71-S81.
Brown EM, McDougall GJ, Stewart D, Pereira Caro G, Gonzalez-Barrio R, Allsopp P, Magee P, Crozier A, Rowland I, Gill CIR.  2012.  Persistence of anticancer activity in berry extracts after simulated gastrointestinal digestion and colonic fermentation. PLoS ONE. 7:e49740.
Judge J, Davidson RS, Marion G, White PCL, Hutchings MR.  2007.  Persistence of Mycobacterium avium subspecies paratuberculosis in rabbits: the interplay between horizontal and vertical transmission. Journal of Applied Ecology. 44:302-311. Abstract
Michelena P, Jeanson R, Deneubourg JL, Sibbald AM.  2010.  Personality and collective decision-making in foraging herbivores. Proceedings of the Royal Society of London, B. 277(1684):1093-1099.
Amaro TMMM, Thilliez GJA, Motion GB, Huitema E.  2017.  A perspective on crn proteins in the genomics age: evolution, classification, delivery and function revisited. Frontiers in Plant Science. 8
Munoz-Amatriain M, Hernandez J, Herb D, Baenziger PS, Bochard AM, Capettini F, Casas A, Cuesta-Marcos A, Einfeldt C, Fisk et al..  2020.  Perspectives on low temperature tolerance and vernalization sensitivity in barley: Prospects for facultative growth. Frontiers in Plant Science. 11:ArticleNo.585927.
Ferretti L, Perez-Martin E, Zhang FQ, Maree F, de Klerk-Lorist LM, van Schalkwykc L, Juleff ND, Charleston B, Ribeca P.  2020.  Pervasive within-host recombination and epistasis as major determinants of the molecular evolution of the foot-and-mouth disease virus capsid. PLoS Pathogens. 16:ArticleNo.e1008235.
Skelsey P, With KA, Garrett KA.  2013.  Pest and disease management: Why we shouldn't go against the grain. PLoS ONE. 8:e75892.
Toth I.  2014.  Pesticides "security" threat. Chemistry and Industry. 78:28.
Kettle H, Donnelly R, Flint HJ, Marion G.  2014.  pH feedback and phenotypic diversity within bacterial functional groups of the human gut. Journal of Theoretical Biology. 342:62-69.
AlRabiah H, Allwood JW, Correa E, Xu Y, Goodacre R.  2018.  pH plays a role in the mode of action of trimethoprim on Escherichia coli. PLoS ONE. 13:ArticleNo.e0200272.
Greer E, Martin AC, Pendle A, Colas I, Jones AME, Moore G, Shaw P.  2012.  The Ph1 locus suppresses Cdk2-type activity during premeiosis and meiosis in wheat. The Plant Cell. 24:152-162.
Zhou JL, Zhang ZL, Banks E, Grover D, Jiang JQ.  2009.  Pharmaceutical residues in wastewater treatment works effluents and their impact on receiving river water. Journal of Hazardous Materials.. 166(2-3):655-661.
Drits VA, Sakharov BA, Hillier S.  2018.  Phase and structural features of tubular halloysite (7 angstrom). Clay Minerals. 53:691-720.
Vagiri M, Conner S, Stewart D, Andersson SC, Verrall S, Johansson E, Rumpunen K.  2008.  Phenolic compounds in blackcurrant (Ribes nigrum L.) leaves relative to leaf position and harvest date. Food Chemistry. 172:135-142.
Vagiri M, Conner S, Stewart D, Andersson SC, Verrall S, Johansson E, Rumpunen K.  2015.  Phenolic compounds in blackcurrant (Ribes nigrum L.) leaves relative to leaf position and harvest date. Food Chemistry. 172:135-142.
McDougall GJ.  2017.  Phenolic-enriched foods: sources and processing for enhanced benefits. Proceedings of the Nutrition Society. 76:163-171.
Pantidos N, Boath A, Lund V, Conner S, McDougall GJ.  2014.  Phenolic-rich extracts from the edible seaweed, Ascophyllum nodosum, inhibit alpha-amylase and alpha-glucosidase: Potential anti-hyperglycemic effects. Journal of Functional Foods. 10:201-209.
Pozsgai G, Baird J, Littlewood NA, Pakeman RJ, Young MR.  2018.  Phenological changes of the most commonly-sampled ground beetle (Coleoptera: Carabidae) species in the UK Environmental Change Network. International Journal of Biometeorology. Published online..
Pozsgai G, Baird J, Littlewood NA, Pakeman RJ, Young MR.  2018.  Phenological changes of the most commonly-sampled ground beetle (Coleoptera: Carabidae) species in the UK environmental change network. International Journal of Biometeorology. 62:1063-1074.
Burthe S, Daunt F, Butler A, Elston DA, Frederiksen M, Johns D, Newell M, Thackeray SJ, Wanless S.  2012.  Phenological trends and trophic mismatch across multiple levels of a North Sea pelagic food web. International Journal of Plant Genomics. 454:119-133.
Beresford AE, Sanderson FJ, Donald PF, Burfield IJ, Butler A, Vickery JA, Buchanan GM.  2019.  Phenology and climate change in Africa and the decline of Afro-Palearctic migratory bird populations. Remote Sensing in Ecology amd Conservation. 5:55-69.
Canton GJ, Katzer F, Benavides-Silvan J, Maley SW, Palarea-Albaladejo J, Pang Y, Smith S, Bartley PM, Rocchi M, Innes EA et al..  2013.  Phenotypic characterisation of the cellular immune infiltrate in placentas of cattle following experimental inoculation with Neospora caninum in late gestation. Veterinary Research. 44
Senn HV, Swanson GM, Goodman SJ, Barton NH, Pemberton JM.  2010.  Phenotypic correlates of hybridisation between red and sika deer (genus Cervus). Journal of Animal Ecology. 79(2):414-425.
Vetukuri RR, Asman AKM, Jahan SN, Avrova AO, Whisson SC, Dixelius C.  2013.  Phenotypic diversification by gene silencing in Phytophthora plant pathogens. Communicative and Integrative Biology. 6:e25890.
Yu P, White PJ, Hochholdinger F, Li CJ.  2014.  Phenotypic plasticity of the maize root system in response to heterogeneous nitrogen availability. Planta. 240:667-678.
Collazo C, Ramos PL, Chacon O, Borroto CJ, Lopez Y, Pujol M, Thomma BPHJ, Hein I, Borras-Hidalgo O.  2006.  Phenotypical and molecular characterization of Tomato mottle Taino virus - Nicotiana megalosiphon interaction. Physiological and Molecular Plant Pathology. 67:231-236. Abstract
Liang X, Kierans M, Ceci A, Hillier S, Gadd GM.  2016.  Phosphatase-mediated bioprecipitation of lead by soil fungi. Environmental Microbiology. 18:219-231.
Burra DD, Berkowitz O, Hedley PE, Morris J, Resjo S, Levander F, Liljeroth E, Andreasson E, Alexandersson E.  2014.  Phosphite-induced changes of the transcriptome and secretome in Solanum tuberosum leading to resistance against Phytophthora infestans. BMC Plant Biology. 14
Giles CD, Richardson AE, Cade-Menun BJ, Mezeli MM, Brown LK, Menezes-Blackburn D, Darch T, Blackwell MSA, Shand CA, Stutter MI et al..  2018.  Phosphorus acquisition by citrate- and phytase-exuding Nicotiana tabacum plant mixtures depends on soil phosphorus availability and root intermingling. Physiologia Plantarum. 163:356-371.
George TS, Hinsinger P, Turner BL.  2016.  Phosphorus in soils and plants - facing phosphorus scarcity. Plant and Soil. 401:1-6.
Roberts WM, George TS, Stutter MI, Louro A, Ali M, Haygarth PM.  2020.  Phosphorus leaching from riparian soils with differing management histories under three grass species. Journal of Environmental Quality. 49:74-84.
Scalenghe EERAC, Barberis E.  2007.  Phosphorus loss in overfertilized soils: The selective P partitioning and redistribution between particle size separates. European Journal of Agronomy. 27(1):72-80.
Roberts WM, Stutter MI, Haygarth PM.  2012.  Phosphorus retention and remobilization in vegetated buffer strips: a review. Journal of Environmental Quality. 41:389-399.
Richards S, Marshall R, Lag-Brotons AJ, Semple KT, Stutter MI.  2021.  Phosphorus solubility changes following additions of bioenergy wastes to an agricultural soil: implications for crop availability and environmental mobility. Geoderma. Published online..
Santos EF, Pongrac P, Reis AR, White PJ, Lavres J.  2019.  Phosphorus-zinc interactions in cotton: consequences for biomass production and nutrient-use efficiency in photosynthesis. Physiologia Plantarum. 166:996-1007.
Chapman SN, Faulkner C, Kaiserli E, Garcia-Mata C, Savenkov EI, Roberts AG, Oparka KJ, Christie JM.  2008.  The photoreversible fluorescent protein iLOV outperforms GFP as a reporter of plant virus infection. Proceedings of the National Academy of Sciences, USA. 105:20038-20043. Abstract
Man J, Wang D, White PJ.  2017.  Photosynthesis and drymass production of winter wheat in response to micro-sprinkling irrigation. Agronomy Journal. 109:549-561.
Raven JA, Griffiths H.  2015.  Photosynthesis in reproductive structures: costs and benefits. Journal of Experimental Botany. 66:1699-1705.
Petridis A, van der Kaay J, Chrysanthou E, McCallum S, Graham J, Hancock RD.  2018.  Photosynthetic limitation as a factor influencing yield in highbush blueberries (Vaccinium corymbosum) in a northern European environment. Journal of Experimental Botany. 69:3069-3080.
Petridis A, van der Kaay J, Sungurtas J, Verrall SR, McCallum SR, Graham J, Hancock RD.  2020.  Photosynthetic plasticity allows blueberry (Vaccinium corymbosum L.) plants to compensate for yield loss under conditions of high sink demand. Environmental and Experimental Botany. 174:ArticleNo.104031.
Brown SP, Mead AJ, Forgan DH, Raven JA, Cockell CS.  2014.  Photosynthetic potential of planets in 3:2 spin-orbit resonances. International Journal of Astrobiology.
Aitkenhead MJ, Gaskin GJ, Lafouge N, Hawes C.  2017.  PHYLIS: A low-cost portable visible range spectrometer for soil and plants. Sensors. 17:ArticleNo.99.
Zhou SYD, Zhu D, Giles M, Yang XR, Daniell T, Neilson R, Zhu YG.  2019.  Phyllosphere of staple crops under pig manure fertilization, a reservoir of antibiotic resistance genes. Environmental Pollution. 252:227-235.
McIntosh FM, Maison N, Holtrop G, Young P, Stevens VJ, Ince J, Johnstone AM, Lobley GE, Flint HJ, Louis P.  2012.  Phylogenetic distribution of genes encoding beta-glucuronidase activity in human colonic bacteria and the impact of diet on faecal glycosidase activities. Environmental Microbiology. 14:1876-1887.
Pagaling E, Gatica J, Yang K, Cytryn E, Yan T.  2016.  Phylogenetic diversity of ceftriaxone resistance and the presence of extended-spectrum beta-lactamase genes in the culturable soil resistome. Journal of Global Antimicrobial Resistance.
White PJ, Bowen HC, Farley E, Shaw EK, Thompson JA, Wright G, Broadley MR.  2015.  Phylogenetic effects on shoot magnesium concentration. Crop and Pasture Science. 66:1241-1248.
Nuhn ME, Binder M, Taylor AFS, Halling RE, Hibbett DS.  2013.  Phylogenetic overview of the Boletineae. Fungal Biology. 117:479-511.
Mostowfizadeh-Ghalamfarsa R, Panabi F, Banihashemi Z, Cooke DEL.  2010.  Phylogenetic relationship of Phytophthora cryptogea Pethybr. & Laff and P. drechsleri Tucker. Fungal Biology. 114:325-339.
Duarte IM, De Almeida MTM, Brown DJF, Marques I, Neilson R, Decraemer W.  2010.  Phylogenetic relationships, based on SSU rDNA sequences, among the didelphic genera of the family Trichodoridae from Portugal. Nematology. 12:171-180.
Beugelsdijk DCM, van der Linde S, Zuccarello GC, den Bakker HC, Draisma SGA, Noordeloos ME.  2008.  A phylogenetic study of Boletus section Boletus in Europe. Persoonia. 20:1-7.
Smkal P, Kenicer G, Flavell AJ, Corander J, Kosterin O, Redden RJ, Ford R, Coyne CJ, Maxted M, Ambrose MJ et al..  2011.  Phylogeny, phylogeography and genetic diversity of the Pisum genus. Plant Genetic Resources. 9:4-18.
McMinn D, Oreskovic NM, Aitkenhead MJ, Johnston DW, Murtagh S, Rowe DA.  2014.  The physical environment and health-enhancing activity during the school commute: global positioning system, geographical information systems and accelerometry. Geospatial Health. 8:569-572.
Fleury D, Luo MC, Dvorak J, Ramsay L, Gill BS, Anderson OD, You FM, Schoaei Z, Deal KR, Langridge P.  2010.  Physical mapping of a large plant genome using global high-information-content-fingerprinting: the distal region of the wheat ancestor Aegilops tauschii chromosome 3DS. BMC Genomics. 11:-382.
Gregory AS, Watts CW, Whalley WR, Kuan HL, Griffiths BS, Hallett PD, Whitmore AP.  2007.  Physical resilience of soil to field compaction and the interactions with plant growth and microbial community structure. European Journal of Soil Science. 58:1221-1232. Abstract
Peng X, Hallett PD, Zhang B, Horn R.  2011.  Physical response of rigid and non-rigid soils to analogues of biological exudates. European Journal of Soil Science. 62:676-684.
Mayer KFX, Waugh R, Langridge P, Close TJ, Wise RP, Graner A, Matsumoto T, Sato K, Schulman A, Muehlbauer GJ et al..  2012.  A physical, genetic and functional sequence assembly of the barley genome. Nature. 491:711-716.
Stutter MI, Lumsdon DG, Thoss V.  2007.  Physico-chemical and biological controls on dissolved organic matter in peat aggregate soil columns. European Journal of Soil Science. 58:646-657.
Berry P, Spink J, Foulkes J, White PJ.  2010.  The physiological basis of genotypic differences in nitrogen use efficiency in oilseed rape (Brassica napus L.). Field Crops Research. 119:365-373.
White PJ, Broadley MR.  2011.  Physiological limits to zinc biofortification of edible crops. Frontiers in Plant Science. 2:article80.
Vo TKT, Orskov ER, Susmel P.  2009.  Physiological mechanism of low purine derivative excretion in urine of buffaloes compared with Bos taurus cattle. Animal Production Science. 49(11):994-997.
Du B, Kreuzwieser J, Winkler JB, Ghirardo A, Schnitzler JP, Ache P, Alfarraj S, Hedrich R, White PJ, Rennenberg H.  2018.  Physiological responses of date palm (Phoenix dactylifera) seedlings to acute ozone exposure at high temperature. Environmental Pollution. 242:905-913.
Du B, Ma Y, Yáñez-Serrano AM, Arab L, Fasbender L, Alfarraj S, Albasher G, Hedrich R, White PJ, Werner C et al..  2021.  Physiological responses of date palm (Phoenix dactylifera) seedlings to seawater and flooding. New Phytologist. 229:3318-3329.
Giordano M, Norici A, Gilmour DJ, Raven JA.  2007.  Physiological responses of the green alga Dunaliella parva (Volvocales, Chlorophyta) to controlled incremental changes in the N source. Functional Plant Biology. 34:925-934. Abstract
Macdonald CA, Thomas N, Robinson L, Tate KR, Ross DJ, Dando J, Singh BK.  2009.  Physiological, biochemical and molecular responses of soil microbial community after afforestation of pastures with Pinus radiata. Soil Biology and Biochemistry. 41(8):1642-1651.
Hancock RD, Morris WL, Ducreux LJD, Morris JA, Usman M, Verrall SR, Fuller J, Simpson CG, Zhang R, Hedley PE et al..  2014.  Physiological, biochemical and molecular responses of the potato (Solanum tuberosum L.) plant to moderately elevated temperature. Plant Cell and Environment. 37:439-450.
Silva VM, Boleta EHM, Bereta MGD, Lavres J, Martins JT, Santos EF, dos Santos FLM, Putti FF, Furlani E, White PJ et al..  2018.  Physiological, biochemical, and ultrastructural characterization of selenium toxicity in cowpea plants. Environmental and Experimental Botany. 150:172-182.
Silva VM, Boleta EHM, Bereta MGD, Lavres J, Martins JT, Santos EF, dos Santos FLM, Putti FF, Furlani E, White PJ et al..  2018.  Physiological, biochemical, and ultrastructural charcterization of selenium toxicity in cowpea plants. Environmental and Experimental Botany. 150:172-182.
Chichkova NV, Shaw J, Galiullina RA, Drury GE, Tuzhikov AI, Kim S-H, Kalkum M, Hong TB, Gorshkova EN, Torrance L et al..  2010.  Phytaspase, a relocalisable cell death promoting plant protease with caspase specificity. EMBO Journal. 29:1149-1161.
Beloshistov RE, Dreizler K, Galiullina RA, Tuzhikov AI, Serebryakova MV, Reichardt S, Shaw J, Taliansky ME, Pfannstiel J, Chichkova NV et al..  2018.  Phytaspase-mediated precursor processing and maturation of the wound hormone systemin. New Phytologist. 218:1167-1178.
Giampieri F, Afrin S, Stewart D, McDougall GJ, Brennan R, Blyth L, Gasparrini M, Mazzoni L, Capocasa F, Alvarez-Suarez JM et al..  2018.  Phytochemical composition and cytotoxic effects on liver hepatocellular carcinoma cells of different berries following a simulated in vitro gastrointestinal digestion. Molecules. 23:ArticleNo.1918..
Dobson G, Shepherd T, Verrall SR, Conner S, McNicol JW, Ramsay G, Shepherd LVT, Davies HV, Stewart D.  2008.  Phytochemical diversity in tubers of potato cultivars and landraces using a GC-MS metabolomics approach. Journal of Agricultural and Food Chemistry. 56:10280-10291. Abstract
Bjorkman M, Klingen I, Birch ANE, Bones AM, Bruce T, Johansen T, Meadow R, Molmann J, Selijasen R, Smart L et al..  2011.  Phytochemicals of Brassicaceae in plant protection and human health - influences of climate, environment and agronomic practice. Phytochemistry. 72:538-556.
Rubio MC, Calvo-Begueria L, Diaz-Mendoza M, Elhiti M, Moore M, Matamoros MA, James EK, Diaz I, Perez-Rontome C, Villar I et al..  2019.  Phytoglobins in the nuclei, cytoplasm and chloroplasts modulate nitric oxide signaling and interact with abscisic acid. The Plant Journal. Published online..
Ginetti B, Moricca S, Squires JN, Cooke DEL, Ragazzi A, Jung T.  2014.  Phytophthora acerina sp. nov., a new species causing bleeding cankers and dieback of Acer pseudoplatanus trees in planted forests in northern Italy. Plant Pathology. 63:858-876.
Mideros MF, Turissini DA, Guayazán N, Ibarra-Avila H, Danies G, Cárdenas M, Myers K, Tabima J, Goss EM, Bernal A et al..  2018.  Phytophthora betacei, a new species within Phytophthora clade 1c causing late blight on Solanum betaceum in Colombia. Persoonia - Molecular Phylogeny and Evolution of Fungi. 41:39-55.
Jupe J, Stam R, Howden AJM, Morris JA, Zhang R, Hedley PE, Huitema E.  2013.  Phytophthora capsici-tomato interaction features dramatic shifts in gene expression associated with a hemi-biotrophic lifestyle. Genome Biology. 14:R63.
Dick MA, Dobbie K, Cooke DEL, Brasier CM.  2006.  Phytophthora captiosa sp. nov and Phytophthora fallax sp. nov causing crown dieback of Eucalyptus in New Zealand. Mycological Research. 110:393-404. Abstract
Donahoo R, Blomquist CL, Thomas SL, Moulton JK, Cooke DEL, Lamour KH.  2006.  Phytophthora foliorum sp. nov., a new species causing leaf blight of azalea. Mycological Research. 110:1309-1322. Abstract
van Poppel PMJA, Guo J, van de Vondervoort PJI, Jung MWM, Birch PRJ, Whisson SC, Govers F.  2008.  The Phytophthora infestans avirulence gene Avr4 encodes an RXLR-dEER effector. Molecular Plant-Microbe Interactions. 21:1460-1470. Abstract
Bos JIB, Armstrong MR, Gilroy EM, Boevink P, Hein I, Taylor RM, Tian ZD, Engelhardt S, Vetukuri RR, Harrower BE et al..  2010.  Phytophthora infestans effector AVR3a is essential for virulence and manipulates plant immunity by stabilizing host E3 ligase CMPG1. Proceedings of the National Academy of Sciences, USA. 107:9909-9914.
Vetukuri RR, Whisson SC, Grenville-Briggs LJ.  2017.  Phytophthora infestans effector Pi14054 is a novel candidate suppressor of host silencing mechanisms. European Journal of Plant Pathology. 149:771-777.
He Q, McLellan H, Hughes RK, Boevink PC, Armstrong M, Lu Y, Banfield MJ, Tian Z, Birch PRJ.  2019.  Phytophthora infestans effector SFI3 targets potato UKB to suppress early immune transcriptional response. New Phytologist. 222:438-454.
Wang SM, Welsh L, Thorpe P, Whisson SC, Boevink PC, Birch PRJ.  2018.  The Phytophthora infestans haustorium is a site for secretion of diverse classes of infection-associated proteins. MBIO. 9:ArticleNo.e01216-18.
Du Y, Mpina MH, Birch PRJ, Bouwmeester K, Govers F.  2015.  Phytophthora infestans RXLR effector AVR1 interacts with exocyst component Sec5 to manipulate plant immunity. Plant Physiology. 169:1975-1990.
King SRF, McLellan H, Boevink PC, Armstrong MR, Bukharova T, Sukarta O, Win J, Kamoun S, Birch PRJ, Banfielda MJ.  2014.  Phytophthora infestans RXLR Effector PexRD2 interacts with Host MAPKKK epsilon to suppress plant immune signaling. The Plant Cell. 26:1345-1359.
Zheng XZ, Wagener N, McLellan H, Boevink PC, Hua CL, Birch PRJ, Brunner F.  2018.  Phytophthora infestans RXLR effector SFI5 requires association with calmodulin for PTI/MTI suppressing activity. New Phytologist. 219:1433-1446.
Boevink PC, Wang XD, McLellan H, He Q, Naqvi S, Armstrong MR, Zhang W, Hein I, Gilroy EM, Tian ZD et al..  2016.  A Phytophthora infestans RXLR effector targets plant PP1c isoforms that promote late blight disease. Nature Communications. 7
Wang S, McLellan H, Bukharova T, He Q, Murphy F, Shi J, Sun S, van Weymers P, Ren Y, Thilliez G et al..  2019.  Phytophthora infestans RXLR effectors act in concert at diverse subcellular localisations to enhance host colonisation. Journal of Experimental Botany. 70:343-356.
Ren YJ, Armstrong M, Qi Y, McLellan H, Zhong C, Du BW, Birch PRJ, Tian ZD.  2019.  Phytophthora infestans RXLR effectors target parallel steps in an immune signal transduction pathway. Plant Physiology. 180:2227-2239.
Abad ZG, Abad JA, Cacciola SO, Pane A, Faedda R, Moralejo E, Perez-Sierra A, Abad-Campos P, Alvarez-Bernaola LA, Bakonyi J et al..  2014.  Phytophthora niederhauserii sp. nov., a polyphagous species associated with ornamentals, fruit trees and native plants in 13 countries. Mycologia. 106:431-447.
Mostowfizadeh-Ghalamfarsa R, Cooke DEL, Banihashemi Z.  2008.  Phytophthora parsiana sp. nov., a new high-temperature tolerant species. Mycological Research. 112:783-794. Abstract
Finkel ZV, Beardall J, Flynn KJ, Quigg A, Rees TAV, Raven JA.  2010.  Phytoplankton in a changing world: Cell size and elemental stoichiometry. Journal of Plankton Research. 32:119-137.
Raven JA, Finkel ZV, Irwin AJ.  2005.  Picophytoplankton: bottom-up and top-down controls on ecology and evolution. Vie et Milieu - Life and Environment. 55:209-215. Abstract
Saari SK, Campbell CD, Russell JR, Alexander IJ, Anderson IC.  2005.  Pine microsatellite markers allow roots and ectomycorrhizas to be linked to individual trees. New Phytologist. 165:295-304. Abstract
Amaral J, Correia B, Antonio C, Rodrigues AM, Gomez-Cadenas A, Valledor L, Hancock RD, Alves A, Pinto G.  2019.  Pinus susceptibility to pitch canker triggers specific physiological responses in symptomatic plants: an integrated approach. Frontiers in Plant Science. 10:ArticleNo,509.
O'Reilly-Wapstra JM, Moore BD, Brewer M, Beaton J, Sim D, Wiggins NL, Iason GR.  2014.  Pinus sylvestris sapling growth and recovery from mammalian browsing. Forest Ecology and Management. 325:18-25.
Bengough AG, Hans J, Bransby MF, Valentine TA.  2010.  PIV as a method for quantifying root cell growth and particle displacement in confocal images. Microscopy Research and Technique. 73:27-36. Abstract
Gonzalez-Puente M, Campos M, McCall MK, Munoz-Rojas J.  2014.  Places beyond maps; integrating spatial map analysis and perception studies to unravel landscape change in a Mediterranean mountain area (NE Spain). Applied Geography. 52:182-190.
Scott AJ, Shannon PH.  2007.  Planning for rural development in Scotland: A new role for local landscape designations? Planning Theory and Practice. 8:509-528.
Vartapetian AB, Tuzhikov AI, Chichkova NV, Taliansky ME, Wolpert TJ.  2011.  A plant alternative to animal caspases: subtilisin-like proteases. Cell Death and Differentiation. 18:1289-1297.
Rietman H, Champouret N, Hein I, Niks RE, Vleeshouwers VGAA.  2010.  Plant and oomycetes, an intimate relationship: co-evolutionary principles and impact on agricultural practice. CAB Review. 58:1-17.
Bradshaw JE.  2017.  Plant breeding: past, present and future. Euphytica. 213:ArticleNo.UNSP60.
Millam S, Obert B, Pret'ov A.  2005.  Plant cell and biotechnology studies in Linum usitatissimum - a review. Plant Cell, Tissue and Organ Culture. 82:93-103. Abstract
Houston K, Tucker MR, Chowdhury J, Shirley N, Little A.  2016.  The plant cell wall: a complex and dynamic structure as revealed by the responses of genes under stress conditions. Frontiers in Plant Science. 7
Malolepszy A, Kelly S, Sorensen KK, James EK, Kalisch C, Bozsoki Z, Panting M, Andersen SU, Sato S, Tao K et al..  2018.  A plant chitinase controls cortical infection thread progression and nitrogen-fixing symbiosis. ELIFE. 7:ArticleNo.e38874.
Makarov V, Rakitina D, Protopopova A, Yaminsky I, Arutiunian A, Love AJ, Taliansky M, Kalinina N.  2013.  Plant coilin: structural characteristics and RNA-binding properties. PLoS ONE. 8:e53571.
Mitchell C, Brennan RM, Graham J, Karley AJ.  2016.  Plant defense against herbivorous pests: exploiting resistance and tolerance traits for sustainable crop protection. Frontiers in Plant Science. 7
Trinder CJ, Brooker RW, Robinson D.  2013.  Plant ecology's guilty little secret: understanding the dynamics of plant competition. Functional Ecology. 27:918-929.
Auffret AG, Rico Y, Bullock JM, Hooftman DAP, Pakeman RJ, Soons MB, Suárez-Esteban A, Traveset A, Wagner HH, Cousins SAO.  2017.  Plant functional connectivity - integrating landscape structure and effective dispersal. Journal of Ecology. 105:1648-1656.
Johnson D, Anderson IC, Williams A, Whitlock R, Grime J.  2010.  Plant genotypic diversity does not beget root-fungal species diversity. Plant and Soil. 336(1-2):107-111.
Grelet GA, Ba R, Goeke DF, Houliston GJ, Taylor AFS, Durall DM.  2017.  A plant growth-promoting symbiosis between Mycena galopus and Vaccinium corymbosum seedlings. Mycorrhiza. 27:831-839.
Sainz M, Perez-Rontome C, Ramos J, Mulet J, James E, Bhattacharjee U, Petrich J, Becana M.  2013.  Plant hemoglobins can be maintained in functional form by reduced flavins in the nuclei and confer differential tolerance to nitro-oxidative stress. The Plant Journal. 76:875-887.
Jaouannet M, Rodriguez PA, Thorpe P, Lenoir CJG, MacLeod R, Escudero-Martinez C, Bos JIB.  2014.  Plant immunity in plant-aphid interactions. Frontiers in Plant Science. 5
Skiba MW, George TS, Baggs EM, Daniell TJ.  2011.  Plant influence on nitrification. Biochemical Society Transactions. 39:275-278.
Bennett AE, Grussu D, Kam J, Caul S, Halpin C.  2015.  Plant lignin content altered by soil microbial community. New Phytologist. 206:166-174.
Richardson AE, Hocking PJ, Simpson RJ, George TS.  2009.  Plant mechanisms to optimise access to soil phosphorus. Crop and Pasture Science. 60:124-143.
Turner TR, James EK, Poole P.  2013.  The plant microbiome. Genome Biology. 14:209.
Schlaeppi K, Bulgarelli D.  2015.  The plant microbiome at work. Molecular Plant Microbe Interactions. 28:212-217.
Lambers H, Raven JA, Shaver GR, Smith SE.  2008.  Plant nutrient-acquisition strategies change with soil age. Trends in Ecology and Evolution. 23:94-103. Abstract
Schjoerring JK, Cakmak I, White PJ.  2019.  Plant nutrition and soil fertility: Synergies for acquiring global green growth and sustainable development. Plant and Soil. 434:1-6.
White PJ, Brown PH.  2010.  Plant nutrition for sustainable development and global health. Annals of Botany. 105:1073-1080.

Printed from /publications/publications-list/tg/P?sort=title&order=asc on 28/05/22 11:53:58 PM

The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.