Publications list
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2012.
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2021.
Common stories of reintroduction: A discourse analysis of documents supporting animal reintroductions to Scotland. Land Use Policy. 29:911-920.
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2012.
Supply of online environmental information to unknown demand: the importance of interpretation and liability related to a national network of river level data. Scottish Geographical Journal. 131:245-252.
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2015.
The promise of wilderness between paradise and hell: a cultural-historical exploration of a Dutch National Park. Landscape Research. 37:239-256.
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2012.
Towards more effective online environmental information provision through tailored natural language generation: Profiles of Scottish river user groups and an evaluative online experiment. Science of the Total Environment. 673:643-655.
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2019.
Environmental communication in the Information Age: Institutional barriers and opportunities in the provision of river data to the general public. Environmental Science and Policy. 55:47-53.
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2016.
Political decision-making, governance shifts and Scottish animal reintroductions: are democratic principles at stake? Journal of Environmental Planning and Management. 57:612-628.
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2013.
The Instagrammable outdoors - investigating the sharing of nature experiences through visual social media. People and Nature. Published online..
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2021.
Potential pitfalls in the quantitative molecular detection of escherichia coli O157:H7 in environmental matrices. Canadian Journal of Microbiology. 52(5):482-488.
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2006.
FTIR spectroscopy can be used as a screening tool for organic matter quality in regenerating cutover peatlands. Soil Biology and Biochemistry. 40(2):515-527.
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2008.
Changes in fungal community composition in response to vegetational succession during the natural regeneration of cutover peatlands. Microbial Ecology. 54(3):508-522.
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2007.
FTIR spectroscopy can be used as a screening tool for organic matter quality in regenerating cutover peatlands. Soil Biology & Biochemistry. 40:515-527. Abstract
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2008.
Long term repeated prescribed burning increases evenness in the basidiomycete laccase gene pool in forest soils. FEMS Microbiology Ecology. 67(3):397-410.
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2009.
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2013.
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2007.
The potential for modelling peatland habitat condition in Scotland using long-term MODIS data. Science of the Total Environment. 660:429-442.
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2019.
Substrate utilisation profiles of microbial communities in peat are depth-dependent and correlate with whole soil FTIR profiles. Soil Biology and Biochemistry. 38(9):2958-2962.
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2006.
Functional microbial diversity in European remediating cutover peatlands is directed by labile carbon. Journal of Applied Ecology. 45(6):1799-1809.
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2008.
Are humus forms, mesofauna and microflora in subalpine forest soils sensitive to thermal conditions? Biology and Fertility of Soils. 48:709-725.
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2012.
Variability in oxidative degradation of charcoal: influence of production variables and environmental exposure. Geochimica et Cosmochimica Acta. 75:2361-2378.
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2011.
Expression and localization of a Rhizobium-derived cambialistic superoxide dismutase in pea (Pisum sativum) nodules subjected to oxidative stress. Molecular Plant-Microbe Interactions. 24:1247-1257.
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2011.
RNA2 of TRV SYM breaks the rules for tobravirus genome structure. Virus Research. 160:435-438.
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2011.
Evaluating soil stabilisation by biological processes using step-wise aggregate fractionation. Soil and Tillage Research. 102:209-215.
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2009.
Study of wild Solanum species to identify sources of resistance against the green peach aphid, Myzus persicae (Sulzer). American Journal of Potato Research.. 90:66-70.
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2013.
Plant-mediated effects of drought on aphid population structure and parasitoid attack rates. Journal of Applied Entomology. 137:136-145.
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2013.
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2014.
Toward a regional and world geography under a changed climate. Eurasian Geography and Economics. 52:1-11.
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2011.
Calculations on the back of a climate envelope: Addressing the geography of species distributions. Proceedings of the National Academy of Sciences, USA. 106(16):E44.
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2009.
Calculations on the back of a climate envelope: addressing the geography of species distributions. Letter to Proceedings of the National Academy of Sciences on the paper: Beale, C., Lennon, J. and Gimona, A. (2008) Opening the climate envelope reveals no macroscale associations with climate in European birds. PNAS, 105, 14908-14912.. 106(16)
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2009.
Ecosystem services as the products of land system dynamics: lessons from a longitudinal study of coupled human-environment systems. Landscape Ecology. 34:1503-1524.
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2019.
A century of physical geography research in the Annals. Annals of the Association of American Geographers. 100(5):1049-1059.
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2010.
Geographical perspectives on climate change. Annals of the Association of American Geographers. 100(4):715-718.
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2010.
Ecosystem services: nature's balance sheet. Science. 342:421-421.
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2013.
Hot spots of wheat yield decline with rising temperatures. Global Change Biology. 23:24264-2472.
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2017.
Climate change impact and adaptation for wheat protein. Global Change Biology. 25:155-173.
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2019.
Rising temperatures reduce global wheat production. Nature Climate Change. 5:143-147.
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2015.
Integrative concepts and practices of health in transdisciplinary social ecology. Socio-Ecological Practice Research. Published online..
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2019.
Relationship between pro-environmental attitudes and behaviour and dietary intake patterns. Sustainable Production and Consumption. 16:216-226.
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2018.
Livestock predation in the Bale Mountains, Ethiopia. African Journal of Ecology. 48(4):1076-1082.
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2010.
Declining chilling and its impact on temperate perennial crops. Environmental and Experimental Botany. 91:48-62.
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2013.
Distributional issues in natural capital accounting: An application to land ownership and ecosystem services in Scotland. Environmental and Resource Economics.
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2021.
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2016.
Plant functional connectivity - integrating landscape structure and effective dispersal. Journal of Ecology. 105:1648-1656.
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2017.
Using the truncated auto-Poisson model for spatially correlated counts of vegetation. Journal of Agricultural, Biological and Environmental Statistics. 11(1):1-23.
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2006.
Using the truncated auto-Poisson model for spatially correlated counts of vegetation. Journal of Agricultural Biological and Environmental Statistics. 11:1-23. Abstract
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2006.
Two year dynamics of foliage labelling in 8 year-old Pinus pinaster trees with 15N 26Mg and 42Ca - simulation of Ca transport using an upscaling approach. Annals of Forest Science. 68:169-178.
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2011.
Exploring shared public perspectives on biodiversity attributes. People and Nature. 3:901-913.
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2021.
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2018.
Identifying conflicts and opportunities for collaboration in the management of a wildlife resource: a mixed-methods approach. Wildlife Research. 37(8):647-657.
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2010.
Incentivising the collaborative management of ecological resources: a case study of wild deer in the UK. Land Use Policy. 36:485-491.
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2014.
Synergies and trade-offs between ecosystem services in an alpine ecosystem grazed by sheep - an experimental approach. Basic and Applied Ecology. 17:596-608.
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2016.
Potential for pathogen reduction in anaerobic digestion and biogas generation in Sub-Saharan Africa. Biomass and Bioenergy. 70:112-124.
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2014.
Survival of Eschericgia coli O157:H7 in waters from lakes, troughs, rivers, puddles and animal drinking troughs. The Science of the Total Environment. 389(2-3):378-385.
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2008.
Prevalence and survival of potential pathogens in source segregated green waste compost. Science of the Total Environment. 431:128-138.
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2012.
Constructed wetlands for grey water treatment. Ecohydrology and Hydrobiology. 7(3-4):191-200.
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2008.
Heat and lime treatment as an effective control method of e-coli O157:H7 in organic wastes. Bioresource Technology. 100(10):2692-2698.
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2009.
A novel Phytophthora infestans haustorium-specific membrane protein is requred for infection of potato. Cellular Microbiology. 10:2271-2284. Abstract
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2008.
Rhynchosporium commune: a persistent threat to barley cultivation. Molecular Plant Pathology. 13:986-997.
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2012.
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2007.
Functional roles for redox genes in ethanol sensitivity in Drosophila. Functional and Integrative Genomics. 12:305-315.
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2012.
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2015.
Keeping modelling notebooks with TRACE: good for you and good for environmental research and management support. Environmental Modelling and Software. 136:ArticleNo.104932.
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2021.
Direct uptake of soil nitrogen by mosses. Biology Letters. 2(2):286-288.
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2006.
The centenary of Annals of Applied Biology in 2014. Annals of Applied Biology. 164:1-7.
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2014.
Underground allies: how and why do mycelial networks help plants defend themselves? BioEssays. 36:21-26.
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2014.
How rapid is aphid-induced signal transfer between plants via common mycelial networks? Communicative and Integrative Biology. 6:e25904.
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2013.
Increasing phosphorus supply is not the mechanism by which arbuscular mycorrhiza increase attractiveness of bean (Vicia faba) to aphids. Journal of Experimental Botany. 65:5231-5241.
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2014.
Underground signals carried through common mycelial networks warn neighbouring plants of aphid attack. Ecology Letters. 16:835-843.
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2013.
Arbuscular mycorrhizal fungi and aphids interact by changing host plant quality and volatile emission. Functional Ecology. 28:375-385.
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2014.
Household livelihood strategies and forest dependence in the highlands of Tigray, Northern Ethiopia. Agricultural Systems. 98:147-155.
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2008.
The economic contribution of forest resource use to rural livelihoods in Tigray, Northern Ethiopia. Forest Policy and Economics. 11(2):123-131.
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2009.
The NuGO proof of principle study package: a collaborative research effort of the European Nutrigenomics Organisation. Genes and Nutrition. 3:147-151.
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2008.
Testing the climate intervention potential of ocean afforestation using the Great Atlantic Sargassum Belt. Nature Communications. 12:ArticleNo.2556.
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2021.
Testing the climate intervention potential of ocean afforestation using the Great Atlantic Sargassum Belt. Nature Communications. 12:ArticleNo.2556.
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2021.
Effect of supplementation with an 80:20 cis9, trans11 conjugated linoleic acid blend on the human platelet proteome. Molecular Nutrition and Food Research. 56:1148-1159.
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2012.
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2015.
Atomic spectrometry update - atomic mass spectrometry. Journal of Analytical Atomic Spectrometry. 21(8):785-818.
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2006.
Is there a future for sequential chemical extraction? Analyst. 132(1):25-46.
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2008.
Atomic spectrometry update: atomic mass spectrometry. Journal of Analytical Atomic Spectrometry. 22(8):973-1006.
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2007.
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2006.
Atomic spectrometry update. Atomic mass spectrometry. Journal of Analytical Atomic Spectrometry. 23
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2008.
The demography of feral alfalfa (Medicago sativa L.) populations occurring in road side habitats in southern Manitoba Canada: Implications for novel trait confinement. Environmental Science and Pollution Research. 17:1448-1459.
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2010.
Modelling the dynamics of feral alfalfa populations and its management implications. PLoS One. 7:e39440.
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2012.
Identification of key soil and terrain properties that influence the spatial variability of soil moisture throughout the growing season. Soil Use and Management. 25(3):320-332.
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2009.
Long-term trends in hydro-climatology of a major Scottish mountain river. Science of the Total Environment. 407:4633-4641.
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2009.
Long-term trends in hydroclimatology of a Scottish mountain river. The Science of the Total Environment. 407(16):4633-4641.
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2009.
Soil risk maps - Interpreting soils data for policy makers, agencies and industry. Soil Use and Management. 36:19-26.
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2020.
Facilitation displaces hotspots of diversity and allows communities to persist in heavily stressed and disturbed environments. Journal of Vegetation Science.. 25:66-76.
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2014.
Turnover of carbon, nitrogen and sulfur in bovine longissimus dorsi and psoas major muscles: Implications for isotopic authentication of meat. Journal of Animal Science. 87:905-913.
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2009.
Alteration of the carbon and nitrogen stable isotope composition of beef by substitution of grass silage with maize silage. Rapid Communications in Mass Spectrometry. 19:1937-1942. Abstract
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2005.
Seasonal variation in the C, N and S stable isotope composition of retail organic and conventional Irish beef. Food Chemistry. 106:1299-1305. Abstract
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2008.
Stability of small ubiquitin-like modifier (SUMO) proteases OVERLY TOLERANT TO SALT1 and-2 modulates salicylic acid signalling and SUMO1/2 conjugation in Arabidopsis thaliana. Journal of Experimental Botany. 67:353-363.
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2016.
Clay mineral source tracing and characterisation of Burdekin River (NE Australia) and flood plume fine sediment. Journal of Soils and Sediments. 16:687-706.
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2016.
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2008.
Kodoja: A workflow for virus detection in plants using k-mer analysis of RNA-sequencing data. Journal of General Virology. 100:533-542.
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2019.
High-throughput metabolic screening of microalgae genetic variation in response to nutrient limitation. Metabolomics. 12:ArticleNo.9.
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2016.
Emission trading in agriculture: a study of design options using an agent-based approach. Mitigation and Adaptation Strategies for Global Change.. 14(8):755-776.
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2009.
Estimating carbon price from a closed emission trading scheme in the agricultural sector. Journal of Land Use Science. 6:1-18.
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2012.
Cost-effectiveness analysis of policy instruments for greenhouse gas emission mitigation in the agricultural sector. Journal of Environmental Management. 112:33-44.
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2012.
Degradation of metalaxyl M in contrasting soils is influenced more by differences in physicochemical characteristics than in microbial community composition after reinoculation of sterilised soils. Soil Biology and Biochemistry.. 42(7):1123-1131.
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2010.
GTP-cyclohydrolase and development in Teladorsagia circumcinta and Dictyocaulus viviparus (Nematoda:Strongylida). Experimental Parasitology. 128:309-317.
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2011.
The low recombining pericentromeric region of barley restricts gene diversity and evolution but not gene expression. The Plant Journal. 79:981-992.
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2014.
Environmental and spatial characterisation of bacterial community composition in soil to inform sampling strategies. Soil Biology and Biochemistry. 41(11):2292-2298.
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2009.
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2015.
Assessing the willingness to pay for reliable domestic water supply via catchment management: results from a contingent valuation survey in Nairobi City, Kenya. Journal of Environmental Planning and Management. 56:1511-1531.
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2013.
A conjoint analysis of landholder preferences for reward-based land-management contracts in Kapingazi watershed, Eastern Mount Kenya. Journal of Environmental Management. 92:2634-2646.
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2011.
Integrating economic and biophysical data in assessing cost-effectiveness of buffer strip placement. Journal of Environmental Quality. 41:380-388.
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2012.
A review on cost-effectiveness analysis of agri-environmental measures related to the EU WFD: Key issues, methods, and applications. Ecological Economics. 70:1021-1031.
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2011.
Integrated cost-effectiveness analysis of agri-environmental measures for water quality. Journal of Environmental Management. 161:163-172.
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2015.
Assessing the sustainability of forest management: an application of multi-criteria decision analysis to community forests in northern Ethiopia. Journal of Environmental Management. 91:1294-1304.
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2010.
How effective are agricultural management measures at improving water quality? Intersezioni - Online magazine of the Agronomist Professional Association of Milano, 40, 18 December 2013..
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2013.
Cost-benefit analysis of soil and water conservation measures: The case of exclosures in northern Ethiopia. Forest Policy and Economics. 15:27-36.
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2012.
Integrated policy analysis to identify transformation paths to more-sustainable legume-based food and feed value-chains in Europe. Agroecology and Sustainable Food Systems. Published online..
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2021.
Exploitative competition alters bee foraging and flower choice. Behavioral Ecology and Sociobiology. 69:1731-1738.
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2015.
Seasonal nitrous oxide emissions in field soils under soil management of reduced tillage, compost application or organic farming. Agriculture, Ecosystems and Environment. 189:17-180.
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2014.
Visual soil evaluation: a summary of some applications and potential developments for agriculture. Soil and Tillage Research. 173:114-124.
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2017.
Trans-species polymorphism and selection in the MHC class II DRA genes of domestic sheep. PLoS One. 5:-e11402.
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2010.
Lack of evidence for an association between MHC diversity and the development of bovine neonatal pancytopenia in Holstein dairy cattle. Veterinary Immunology and Immunopathology. 141:128-132.
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2011.
Application of wedge fracture test for texture analysis in boiled Sweetpotato (Ipomoea batatas). African Journal of Food Science. 15:145-151.
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2021.
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2017.
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2014.
The synaptonemal complex protein ZYP1 is required for imposition of meiotic crossovers in barley. The Plant Cell. 26:729-740.
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2014.
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2016.
Stimulation of homologous recombination in plants expressing heterologous recombinases. BMC Plant Biology. 20:ArticleNo.336.
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2020.
Syringyl lignin is unaltered by severe sinapyl alcohol dehydrogenase suppression in tobacco. Plant Cell. 23:4492-4506.
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2011.
Downregulation of barley Regulator of Telomere Elongation Helicase 1 alters the distribution of meiotic crossovers. Frontiers in plant science. 12:ArticleNo.745070.
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2021.
Barley anther and meiocyte transcriptome dynamics in meiotic prophase I. Frontiers in Plant Science. 11:ArticleNo.619404.
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2021.
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2019.
Rhizobium altiplani sp. nov. isolated from effective nodules on Mimosa pudica growing in untypically alkaline soil in Central Brazil. International Journal of Systematic and Evolutionary Microbiology. 66:1-7.
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2016.
Long noncoding RNA modulates alternative splicing regulators in Arabidopsis. Developmental Cell. 30:166-176.
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2014.
Stakeholders' views on natural flood management: implications for the nature-based solutions paradigm shift? Environmental Science and Policy. 116:91-98.
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2021.
Development of a national-scale real-time Twitter data mining pipeline for social geodata on the potential impacts of flooding on communities. Environmental Modelling and Software. 115:213-227.
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2019.
Comparison of genome sequence of PVY isolates with biological properties. American Journal of Potato Research. 86:227-238.
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2009.
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2008.
Stakeholders engagement platform to identify sustainable pathways for the development of multi-functional agroforestry in Guadeloupe, French West Indies. Agroforestry Systems. Published online..
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2021.
What are the impacts of social innovation? A synthetic review and case study of community forestry in the Scottish Highlands Sustainability. 13:ArticleNo.4359.
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2021.
Is forest regeneration good for biodiversity? Exploring the social dimensions of an apparently ecological debate Environmental Science and Policy. 120:63-72.
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2021.
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2016.
Quantitative image analysis of earthworm-mediated soil displacement. Biology and Fertility of Soils. 45:821-828.
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2009.
Rheological stabilisation of wet soils by model root and fungal exudates depends on clay mineralogy. European Journal of Soil Science. 60:525-538. Abstract
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2009.
Earthworms bring compacted and loose soils to a similar mechanical state. Soil Biology & Biochemistry. 41:656-658. Abstract
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2009.
Is there an impact of climate change on soil carbon contents in England and Wales? European Journal of Soil Science. 66:451-462.
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2015.
Framework for estimating indirect costs in animal health using time series analysis. Frontiers in Veterinary Science. 6:ArticleNo.190.
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2019.
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2011.
The direct response of the external mycelium of arbuscular mycorrhizal fungi to temperature and the implications for nutrient transfer. Soil Biology and Biochemistry. 78:109-117.
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2014.
Within year variation in the vegetative spread of five temperate grasses. Journal of Vegetation Science. 17(3):315-322.
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2006.
Operational considerations for hot-washing in potato crisp manufacture. Food and Bioproducts Processing. 124:387-396.
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2020.
A critical review of current methods in earthworm ecology: From individuals to populations (Review). European Journal of Soil Biology. 46:67-73.
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2010.
Identification and evaluation of vaccine candidate antigens from the poultry red mite (Dermanyssus gallinae). International Journal for Parasitology, 45, 819-830..
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2015.
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2012.
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2013.
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2012.
Selection and characterisation of monepantel resistance in Teladorsagia circumcincta isolates. International Journal for Parasitology - Drugs and Drug Resistance. 5:69-76.
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2015.
The development of immune responses in Balb/c mice following inoculation with attenuated or virulent Neospora caninum tachyzoites. Parasite Immunology. 31:392-401.
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2009.
Evolutionary temperature compensation of carbon fixation in marine phytoplankton. Ecology Letters. 23:722-733.
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2020.
The slip surface in the D zone of the barton clay. Quarterly Journal of Engineering Geology and Hydrogeology. 39(4):357-370.
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2006.
Call for transparency of COVID-19 models. Science. 368:482-483.
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2020.
Evolutionary trait-based approaches for predicting future global impacts of plant pathogens in the genus Phytophthora. Journal of Applied Ecology. 58:718-730.
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2021.
Eight principles of integrated pest management. Agronomy for Sustainable Development. 35:1199-1215.
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2015.
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2009.
Variable rate nitrogen fertilizer response in wheat using remote sensing. Precision Agriculture. 17:168-182.
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2016.
Environmental and economic benefits of variable rate nitrogen fertilization in a nitrate vulnerable zone. Science of the Total Environment. 545:227-235.
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2016.
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2016.
RNA- and DNA-based profiling of soil fungal communities in a native Australian eucalypt forest and adjacent Pinus elliotti plantation. Soil Biology and Biochemistry. 39(12):3108-3114.
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2007.
Translocation tactics: a framework to support the IUCN guidelines for wildlife translocations and improve the quality of applied methods. Journal of Applied Ecology. 52:1598-1607.
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2015.
The weaker sex? The propensity for male-biased piglet mortality PLoS ONE. 7:e30318.
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2012.
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2013.
Investigating the behavioural and physiological indicators of neonatal survival in pigs. Theriogenology. 69:773-783. Abstract
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2008.
Comparative visualization of genetic and physical maps with Strudel. Bioinformatics. 27:1307-1308.
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2011.
Development and evaluation of a barley 50k iSelect SNP array. Frontiers in Plant Science. 8:ArticleNo.1792.
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2017.
Specialized membrane domains of plasmodesmata, plant intercellular nanopores. Frontiers in Plant Science. 5
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2014.
Incorporating uncertainty in predictive species distribution modelling. Philosophical Transactions of the Royal Society B. 367:247-258.
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2012.
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2006.
Opening the climate envelope reveals no macroscale associations with climate in European birds. Proceedings of the National Academy of Sciences, USA. 105:14908-14912.
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2008.
Protected area networks and savannah bird biodiversity in the face of climate change and land degradation. Ecology Letters. 16:1061-1068.
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2013.
A new statistical framework for the quantification of covariate associations with species distributions. Methods in Ecology and Evolution. 5:421-432.
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2014.
Red herrings remain in geographical ecology: a reply to Hawkins et al. (2007). Ecography. 30:845-847.
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2007.
Regression analysis of spatial data. Ecology Letters. 13(2):246-264.
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2010.
Climate change may account for the decline in British ring ouzels Turdus torquatus. Journal of Animal Ecology. 75(3):826-835.
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2006.
Managing visitor access to seabird colonies: a spatial simulation and empirical observations. Ibis (Suppl.1.). 149:102-111.
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2007.
Regression analysis of spatial data. Ecology Letters. 13(2):246-264.
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2010.
European bird distributions still show few climate associations. Proceedings of the National Academy of Sciences, USA. 106(16):E41-E43.
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2009.
Regression analysis of spatial data. Ecology Letters. 13:246-264.
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2010.
Calcification and ocean acidification: new insights from the coccolithophore Emiliania huxleyi. New Phytologist. 199:1-3.
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2013.
Cyanobacteria vs green algae: which group has the edge? Journal of Experimental Botany. 68:3697-3699.
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2017.
Regulation of inorganic carbon acquisition by phosphorus limitation in the green alga Chorella emersonii. Canadian Journal of Botany - Review Canadienne de Botanique. 83:859-864. Abstract
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2005.
Allometry and stoichiometry of unicellular, colonial and multicellular phytoplankton. New Phytologist. 181:295-309.
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2009.
Ginger phytochemicals mitigate the obesogenic effects of a high-fat diet in mice: a proteomic and biomarker network analysis. Molecular Nutrition and Food Research. 55:S203-S213.
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2011.
Aorta protein networks in marginal and acute zinc deficiency. Proteomics. 8:2126-2135. Abstract
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2008.
Suboptimal dietary zinc intake promotes vascular inflammation and atherogenesis in a mouse model of atherosclerosis. Molecular Nutrition and Food Research. 56:1097-1105.
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2012.
The role of quantitative cross-case analysis in understanding tropical smallholder farmers’ adaptive capacity to climate shocks. Environmental Research Letters. 14:ArticleNo.125013..
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2019.
Soil and tree biomass carbon sequestration potential of silvopastoral and woodland pasture systems in North East Scotland. Agroforestry Systems. 90:371-383.
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2016.
Process-based principles for restoring river ecosystems. BioScience. 60(3):209-222.
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2010.
Critical issues in trace gas biogeochemistry and global change. Philosophical Transactions of the Royal Society A - Mathematical Physical and Engineering Sciences. 365:1629-1642. Abstract
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2007.
Sexual segregation when foraging in an extremely social killer whale population. Behavioral Ecology and Sociobiology. 70:189-198.
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2016.
Respiration (CO2 flux) from urban and pen-urban soils amended with green waste compost. Geoderma. 223:68-72.
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2014.
A review of biochars' potential role in the remediation, revegetation and restoration of contaminated soils. Environmental Pollution. 159:3269-3282.
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2011.
Assessing the influence of compost and biochar amendments on the mobility and toxicity of metals and arsenic in a naturally contaminated mine soil. Environmental Pollution. 186:195-202.
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2014.
The immobilisation and retention of soluble arsenic, cadmium and zinc by biochar. Environmental Pollution. 159:474-480.
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2011.