Skip to navigation Skip to content

Publications list

Found 5892 results

2014
Aitkenhead M, Coull MC, Dawson LA.  2014.  Predicting sample source location from soil analysis using neural networks. Environmental Forensics. 15:281-292.
Hudson LN, Newbold T, Contu S, Hill SLL, Lysenko I, De Palma A, Phillips HRP, Senior RA, Bennett DJ, Booth H et al..  2014.  The PREDICTS database: a global database of how local terrestrial biodiversity responds to human impacts. Ecology and Evolution. 4:4701-4735.
Holden NJ, Wright F, MacKenzie K, Marshall J, Mitchell S, Mahajan A, Wheatley R, Daniell TJ.  2014.  Prevalence and diversity of Escherichia coli isolated from a barley trial supplemented with bulky organic soil amendments: green compost and bovine slurry. Letters in Applied Microbiology. 58:205-212.
Ribeiro KM, Braga RA, Horgan GW, Ferreira DD, Safadi T.  2014.  Principal component analysis in the spectral analysis of the dynamic laser speckle patterns. Journal of the European Optical Society - Rapid Publications. 9:ArticleNo.14009.
Velmala SM, Rajala T, Heinonsalo J, Taylor AFS, Pennanen T.  2014.  Profiling functions of ectomycorrhizal diversity and root structuring in seedlings of Norway spruce (Picea abies) with fast- and slow-growing phenotypes. New Phytologist. 201:610-622.
Gebreegziabher Z, Naik L, Melamu R, Balana BB.  2014.  Prospects and challenges for urban application of biogas installations in Sub-Saharan Africa. Biomass and Bioenergy. 70:130-140.
Bengtsson T, Weighill D, Proux-Wera E, Levander F, Resjo S, Burra DD, Moushib LI, Hedley PE, Liljeroth E, Jacobson D et al..  2014.  Proteomics and transcriptomics of BABA-induced resistance response in potato using a novel functional annotation approach. BMC Genomics. 15
Rhee YJ, Hillier S, Pendlowski H, Gadd GM.  2014.  Pyromorphite formation in a fungal biofilm community growing on lead metal. Environmental Microbiology. 16:1441-1451.
Tondelli A, Francia E, Visioni A, Comadran J, Mastrangelo AM, Akar T, Al-Yassin A, Ceccarelli S, Grando S, Benbelkacem A et al..  2014.  QTLs for barley yield adaptation to Mediterranean environments in the 'Nure' x 'Tremois' biparental population. Euphytica. 197:73-86.
Dallimer M, Tinch D, Hanley N, Irvine KN, Rourquette JR, Warren PH, Maltby L, Gaston KJ, Armsworth PR.  2014.  Quantifying preferences for the natural world using monetary and non-monetary assessments of value. Conservation Biology. 28:404-413.
Foito A, Hackett CA, Byrne SL, Stewart D, Barth S.  2014.  Quantitative trait loci analysis to study the genetic regulation of non-polar metabolites in perennial ryegrass. Metabolomics. 11:412-424.
Kati AN, Mandrioli M, Skouras PJ, Malloch GL, Voudouris CC, Venturelli M, Manicardi GC, Tsitsipis JA, Fenton B, Margaritopoulos JT.  2014.  Recent changes in the distribution of carboxylesterase genes and associated chromosomal rearrangements in Greek populations of the tobacco aphid Myzus persicae nicotianae. Biological Journal of the Linnean Society. 113:455-470.
Dunn SM, Sample J, Potts J, Abel C, Taylor C, Cook Y, Napier F, Vinten AJA.  2014.  Recent trends in water quality in an agricultural catchment in Eastern Scotland: elucidating the roles of hydrology and land use. Environmental Science: Processes and Impacts. 16:1659-1675.
Jones CM, Spor A, Brennan FP, Breuol MC, Bru D, Lemanceau P, Griffiths B, Hallin S, Philppot L.  2014.  Recently identified microbial guild mediates soil N2O sink capacity. Nature Climate Change. 4:801-805.
Vega-Arreguin JC, Jalloh A, Bos JI, Moffett P.  2014.  Recognition of an Avr3a homologue plays a major role in mediating nonhost resistance to Phytophthora capsici in Nicotiana species. Molecular Plant Microbe Interactions. 27:770-780.
Hindle MM, Martin SF, Noordally ZB, van Ooijen G, Barrios-Llerena ME, Simpson TI, Le Bihan T, Millar AJ.  2014.  The reduced kinome of Ostreococcus tauri: core eukaryotic signalling components in a tractable model species. BMC Genomics. 15:640.
Matthews RB, van Noordwijk M.  2014.  Reducing emissions from deforestation and degradation (REDD+): Lessons learnt in Indonesia, Vietnam, Cameroon and Peru. Mitigation and Adaptation Strategies for Global Change. 19
Heltoft P, Brierley JL, Lees AK, Sullivan L, Lynott J, Hermansen A.  2014.  The relationship between soil inoculum and the development of Fusarium dry rot in potato cultivars Asterix and Saturna. European Journal of Plant Pathology. 146:711-714.
Cognat C, Shepherd T, Verrall SR, Stewart D.  2014.  Relationship between volative profile and sensory development of an oat based biscuit. Food Chemistry. 160:72-81.
Pedersen S, Andreassen HP, Keith DA, Skarpe C, Dickman CR, Gordon IJ, Crowther MS, McArthur C.  2014.  Relationships between native small mammals and native and introduced large herbivores. Austral Ecology. 39:236-243.
Armitage HF, Britton AJ, van der Wal R, Woodin SJ.  2014.  The relative importance of nitrogen deposition as a driver of Racomitrium heath species composition and richness across Europe. Biological Conservation. 171:224-231.
Jones HG.  2014.  Remote sensing of plant stresses and its use in irrigation management. Acta Horticulturae. 1038:239-247.
Bradford MA, Wood SA, Bardgett RD, Black HIJ, Bonkowski M, Eggers T, Grayston SJ, Kandeler E, Manning P, Setala H et al..  2014.  Reply to Byrnes et al.: Aggregation can obscure understanding of ecosystem multifunctionality. Proceedings of the National Academy of Sciences of the United States of America. 111:E5491-E5491.
Ghimire SK, Jones G.  2014.  Restoration of a gauging weir to aid fish passage. Journal of Hydro-Environment Research. 8:43-49.
Quin SLO, Artz RRE, Coupar AM, Littlewood NA, Woodin SJ.  2014.  Restoration of upland heath from a graminoid- to a Calluna vulgaris-dominated community provides a carbon benefit. Agriculture, Ecosystems and Environment. 185:133-143.
Benskin CMH, Roberts WM, Wang Y, Haygarth PM.  2014.  Review of the annual phosphorus loss estimator tool-a new model for estimating phosphorus losses at the field scale. Soil Use and Management. 30:337-341.
Saunders MJ, Kansiime F, Jones MB.  2014.  Reviewing the carbon cycle dynamics and carbon sequestration potential of Cyperus papyrus L. wetlands in tropical Africa. Wetlands Ecology and Management. 22:143-155.
Smith HM, Blackstock KL, Wall G, Jeffrey P.  2014.  River basin management, development planning, and opportunities for debate around limits to growth. Journal of Hydrology. 519:2624-2631.
Stam R, Mantelin S, McLellan H, Thilliez G.  2014.  The role of effectors in non host resistance to filamentous plant pathogens. Frontiers in Plant Science. 5
Mitra A, Flynn KJ, Burkholder JM, Berge T, Calbet A, Raven JA, Graneli E, Glibert PM, Hansen PJ, Stoecker DK et al..  2014.  The role of mixotrophic protists in the biological carbon pump. Biogeosciences. 11:995-1005.
Field C, Dise NB, Payne RJ, Britton AJ, Emmett BA, Helliwell RC, Hughes S, Jones L, Lees S, Leake JR et al..  2014.  The role of nitrogen deposition in widespread plant community change across semi-natural habitats. Ecosystems. 17:864-877.
Haling RE, Brown LK, Bengough AG, Valentine TA, White PJ, Young IM, George TS.  2014.  Root hair length and rhizosheath mass depend on soil porosity, strength and water content in barley genotypes. Planta. 239:643-651.
Smith SW, Woodin SJ, Pakeman RJ, Johnson D, van der Wal R.  2014.  Root traits predict decomposition across a landscape-scale grazing experiment. New Phytologist. 2013:851-862.
Skelsey P, Newton AC.  2014.  Scale-dependent assessment of relative disease resistance to plant pathogens. Agronomy. 4:178-190.
Adu MO, Chatot A, Wiesel L, Bennett MJ, Broadley MR, White PJ, Dupuy LX.  2014.  A scanner system for high-resolution quantification of variation in root growth dynamics of Brassica rapa genotypes. Journal of Experimental Botany. 65:2039-2048.
Brown I, Castellazzi M.  2014.  Scenario analysis for regional decision-making on sustainable multifunctional land uses. Regional Environmental Change. 14:1357-1371.
Ball BC, Griffiths BS, Topp CFE, Wheatley R, Walker RL, Rees RM, Watson CA, Gordon H, Hallett PD, McKenzie BM et al..  2014.  Seasonal nitrous oxide emissions in field soils under soil management of reduced tillage, compost application or organic farming. Agriculture, Ecosystems and Environment. 189:17-180.
Foereid B, Ward DS, Mahowald N, Paterson E, Lehmann J.  2014.  The sensitivity of carbon turnover in the Community Land Model to modified assumptions about soil processes. Earth Systems Dynamics. 5:211-221.
Randall E, Young V, Sierotzki H, Scalliet G, Birch PRJ, Cooke DEL, Csukai M, Whisson SC.  2014.  Sequence diversity in the large subunit of RNA polymerase I contributes to Mefenoxam insensitivity in Phytophthora infestans. Molecular Plant Pathology. 15:664-676.
Ariyadasa R, Mascher M, Nussbaumer T, Schulte D, Frenkel Z, Poursarebani N, Zhou RN, Steuernagel B, Gundlach H, Taudien S et al..  2014.  A sequence-ready physical map of barley anchored genetically by two million single-nucleotide polymorphisms. Plant Physiology. 164:412-423.
Raczynska KD, Stepien A, Kierzkowski D, Kalak M, Bajczyk M, McNicol J, Simpson CG, Szweykowska-Kulinska Z, Brown JWS, Jarmolowski A.  2014.  The SERRATE protein is involved in alternative splicing in Arabidopsis thaliana. Nucleic Acids Research. 42:1224-1244.
Zhang Z, Lefebvre T, Kerr C, Osprey M.  2014.  Simultaneous extraction and determination of various pesticides in environmental waters. Journal of Separation Science. 37:3699-3705.
Werner GDA, Cornwell WK, Sprent JI, Kattge J, Kiers ET.  2014.  A single evolutionary innovation drives the deep evolution of symbiotic N-2-fixation in angiosperms. Nature Communications. 5
Mwirigi J, Balana BB, Mugisha J, Walekhwa P, Melamu R, Nakami S, Makenzi P.  2014.  Socio-economic hurdles to widespread adoption of small-scale biogas digesters in Sub-Saharan Africa : a review. Biomass and Bioenergy. 70:17-25.
White PJ, Crawford J, Alvarez MCD, Moreno RG.  2014.  Soil Management for Sustainable Agriculture 2013. Editorial. Applied and Environmental Soil Science, 2014, Article No. 536825..
Bayer EM, Mongrand S, Tilsner J.  2014.  Specialized membrane domains of plasmodesmata, plant intercellular nanopores. Frontiers in Plant Science. 5
Raven JA.  2014.  Speedy small stomata? Journal of Experimental Botany. 65:1415-1424.
Aitkenhead MJ.  2014.  SPOT-VEGETATION - 15 years of success: What's next? International Journal of Remote Sensing. 35:2397-2401.
Swanston JS, Smith PL, Thomas WTB, Sylvester-Bradley R, Kindred D, Brosnan JM, Bringhurst TA, Agu RC.  2014.  Stability, across environments, of grain and alcohol yield, in soft wheat varieties grown for grain distilling or bioethanol production. Journal of the Science of Food and Agriculture. 94:3234-3240.
Muller B, Balbi S, Buchmann CM, de Sousa L, Dressler G, Groeneveld J, Klassert CJ, Bao Le Q, Millington JDA, Nolzen H et al..  2014.  Standardized and transparent model descriptionsfor agent-based models - current status and prospects. Environmental Modelling and Software. 55:156-163.
Wilson MJ.  2014.  The structure of opal-CT revisited. Journal of Non-Crystalline Solids. 405:68-75.
O'Malley-James JT, Cockell CS, Greaves JS, Raven JA.  2014.  Swansong biospheres II: the final signs of life on terrestrial planets near the end of their habitable lifetimes. International Journal of Astrobiology. 13:229-243.
Barakate A, Higgins JD, Vivera S, Stephens J, Perry RM, Ramsay L, Colas I, Oakey H, Waugh R, Franklin FCH et al..  2014.  The synaptonemal complex protein ZYP1 is required for imposition of meiotic crossovers in barley. The Plant Cell. 26:729-740.
Lovell R, Wheeler BW, Higgins SL, Irvine KN, Depledge MH.  2014.  A systematic review of the health and well-being benefits of biodiverse environments. Journal of Toxicology and Environmental Health, Part B: Critical Reviews. 17:1-20.
Herwig A, Campbell G, Mayer CD, Boelen A, Anderson RA, Ross AW, Mercer JG, Barrett P.  2014.  A thyroid hormone challenge in hypothyroid rats identifies T3 regulated genes in the hypothalamus and in models with altered energy balance and glucose homeostasis. Thyroid. 24:1575-1593.
Hold GL, Berry S, Saunders KA, Drew J, Mayer C, Brookes H, Gay NJ, El-Omar EM, Bryant CE.  2014.  The TLR4 D299G and T399I SNPs are constitutively active to up-regulate expression of Trif-dependent genes. PLoS ONE. 9:e111460.
Hentley WT, Hails RS, Johnson SN, Jones TH, Vanbergen AJ.  2014.  Top-down control by Harmonia axyridis mitigates the impact of elevated atmospheric CO2 on a plant-aphid interaction. Agricultural and Forest Entomology. 16:350-358.
Tomkins JL, Aungier J, Hazel W, Gilbert L.  2014.  Towards an evolutionary understanding of host questing behaviour in the tick lxodes ricinus. PLoS ONE. 9:e110028.
McDougall GJ, Conner S, Pereira-Caro G, Gonzalez-Barrio R, Brown EM, Verrall S, Stewart D, Moffet T, Ibars M, Lawther R et al..  2014.  Tracking (poly)phenol components from raspberries in ileal fluid. Journal of Agricultural and Food Chemistry. 62:7631-7641.
McGrann GRD, Stavrinides A, Russell J, Corbitt MM, Booth A, Chartrain L, Thomas WTB, Brown JKM.  2014.  A trade off between mlo resistance to powdery mildew and increased susceptibility of barley to a newly important disease, Ramularia leaf spot. Journal of Experimental Botany. 65:1025-1037.
Elliott RM, de Roos B, Duthie SJ, Bouwman FG, Rubio-Aliaga I, Crosley LK, Mayer C, Polley AC, Heim C, Coort SL et al..  2014.  Transcriptome analysis of peripheral blood mononuclear cells in human subjects following a 36 h fast provides evidence of effects on genes regulating inflammation, apoptosis and energy metabolism. Genes and Nutrition. 9:ArticleNo.432.
Eves-van den Akker S, Lilley CJ, Danchin EGJ, Rancurel C, Cock PJA, Urwin PE, Jones JT.  2014.  The transcriptome of Nacobbus aberrans reveals insights into the evolution of sedentary endoparasitism in plant-parasitic nematodes. Genome Biology and Evolution. 6:2181-2194.
Ceci A, Rhee YJ, Kierans M, Hillier S, Pendlowski H, Gray N, Persiani AM, Gadd GM.  2014.  Transformation of vanadinite (Pb5(VO4)3Cl) by fungi. Environmental Microbiology. Published online..
Downie H, Valentine TA, Otten W, Spiers AJ, Dupuy LX.  2014.  Transparent soil microcosms allow 3D spatial quantification of soil microbiological processes in vivo. Plant Signaling and Behavior. 9
Farmer J, Matthews RB, Smith P, Smith JU.  2014.  The tropical peatland plantation-carbon assessment tool: estimating CO2 emissions from tropical peat soils under plantations. Mitigation and Adaptation Strategies for Global Change. 19:863-885.
Russell JR, Hedley PE, Cardle L, Dancey S, Morris J, Booth A, Odee D, Mwaura L, Omondi W, Angaine P et al..  2014.  tropiTree: an NGS-based EST-SSR resource for 24 tropical tree species. PLoS ONE. 9:e102502.
Babikova Z, Johnson D, Bruce TJA, Pickett JA, Gilbert L.  2014.  Underground allies: how and why do mycelial networks help plants defend themselves? BioEssays. 36:21-26.
Eley Y, Dawson LA, Black S, Andrews J, Pedentchouk N.  2014.  Understanding H-2/H-1 systematics of leaf wax n-alkanes in coastal plants at Stiffkey saltmarsh, Norfolk, UK. Geochimica et Cosmochimica Acta.. 128:13-28.
George TS, Brown LK, Ramsay L, White PJ, Newton AC, Bengough AG, Russell J, Thomas WTB.  2014.  Understanding the genetic control and physiological traits associated with rhizosheath production by barley (Hordeum vulgare L.). New Phytologist. 203:195-205.
van der Jagt APN, Craig T, Anable J, Brewer MJ, Pearson DG.  2014.  Unearthing the picturesque: the validity of the preference matrix as a measure of landscape aesthetics. Landscape and Urban Planning. 124:1-13.
Pimpao RC, Dew T, Figueira ME, McDougall GJ, Stewart D, Ferreira RB, Santos CN, Williamson G.  2014.  Urinary metabolite profiling identifies novel colonic metabolites and conjugates of phenolics in healthy volunteers. Molecular Nutrition and Food Research. 58:1414-1425.
Munoz-Amatriain M, Cuesta-Marcos A, Endelman JB, Comadran J, Bonman JM, Bockelman HE, Chao SM, Russell J, Waugh R, Hayes PM et al..  2014.  The USDA Barley Core Collection: Genetic diversity, population structure, and potential for genome-wide association studies. PLoS ONE. 9:e94688.
Russell J, Hackett C, Hedley P, Lui H, Milne L, Bayer M, Marshall D, Jorgensen L, Gordon S, Brennan R.  2014.  The use of genotyping by sequencing in blackcurrant (Ribes nigrum): developing high-resolution linkage maps in species without reference genome sequences. Molecular Breeding. 33:835-849.
Jones HG.  2014.  The use of indirect or proxy markers in plant physiology. Plant Cell and Environment.
Love AJ, Makarov V, Yaminsky I, Kalinina NO, Taliansky ME.  2014.  The use of tobacco mosaic virus and cowpea mosaic virus for the production of novel metal nanomaterials. Virology. 449:133-139.
Diamanti J, Mazzoni L, Balducci F, Capelletti T, Capocasa F, Battino M, Dobson G, Stewart D, Mezzetti B.  2014.  Use of wild genotypes in breeding program increases strawberry fruit sensorial and nutritional quality. Journal of Agricultural and Food Chemistry. 62:3944-3953.
Lewis RJ, Pakeman RJ, Angus S, Marrs RH.  2014.  Using compositional and functional indicators for biodiversity conservation monitoring of semi-natural grasslands in Scotland. Biological Conservation. 175:82-93.
Thomas WTB.  2014.  The value of decimal cereal growth stages. Annals of Applied Biology. 165:303-304.
Martin-Ortega J, Allot TEH, Glenk K, Schaafsma M.  2014.  Valuing water quality improvements from peatland restoration: evidence and challenges. Ecosystem Services. 9:34-43.
Brendel M, Janssen A, Mayer CD, Pauly M.  2014.  Weighted logrank permutation tests for randomly right censored life science data. Scandinavian Journal of Statistics. 41:742-761.
Smith J, Abegaz A, Matthews RB, Subedi M, Orskov ER, Tumwesige V, Smith P.  2014.  What is the potential for biogas digesters to improve soil carbon sequestration in Sub-Saharan Africa? Comparison with other uses of organic residues Biomass and Bioenergy. 70:73-86.
Smith J, Abegaz A, Matthews RB, Subedi M, Orskov ER, Tumwesige V, Smith P.  2014.  What is the potential for biogas digesters to improve soil fertility and crop production in Sub-Saharan Africa? Biomass and Bioenergy. 70:58-72.
Dallimer M, Davies ZG, Irvine KN, Maltby L, Warren PH, Gaston KJ, Armsworth PR.  2014.  What personal and environmental factors determine frequency of urban greenspace use? International Journal of Environmental Research and Public Health. 11:7977-7992.
Puttock A, Dungait JAJ, Macleod CJA, Bol R, Brazier RE.  2014.  Woody plant encroachment into grasslands leads to accelerated erosion of previously stable organic carbon from dryland soils. Journal of Geophysical Research-Biogeosciences. 119:2345-2357.
Boden L, Auty H, Goddard P, Stott A, Ball N, Mellor D.  2014.  Working at the science-policy interface. Veterinary Record. 174:165-167.
Pritchard L, Birch PRJ.  2014.  The zigzag model of plant-microbe interactions: is it time to move on? Molecular Plant Pathology. 15:865-870.
Slee B, Brown I, Donnelly D, Gordon IJ, Matthews KB, Towers W.  2014.  The ‘squeezed middle’: identifying and addressing conflicting demands on intermediate quality farmland in Scotland. Land Use Policy. 41:206-216.
2013
Fischer A, Kerezi V, Arroyo B, Mateos-Delibes M, Tadie D, Lowassa A, Skogen K, Figari H.  2013.  (De-) legitimising hunting - discourses over the morality of hunting in Europe and Eastern Africa. Land Use Policy. 32:261-270.
Katayama T, Wilkinson MD, Micklem G, Kawashima S, Yamaguchi A, Nakao M, Yamamoto Y, Okamoto S, Oouchida K, Hong-Woo C et al..  2013.  The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies. Journal of Biomedical Semantics. 4
Sutherland C, Elston DA, Lambin X.  2013.  Accounting for false positive detection error induced by transient individuals. Wildlife Research. 40:490-498.
Andrist-Rangel Y, Simonsson M, Oborn I, Hillier S.  2013.  Acid-extractable potassium in agricultural soils: Source minerals according by differential and quantitative x-ray diffraction. Journal of Plant Nutrition and Soil Science. 176:407-419.
Palomares-Rius JE, Jones JT, Cock PJ, Castillo P, Blok VC.  2013.  Activation of hatching in diapaused and quiescent Globodera pallida. Parasitology. 140:445-454.
Matthews RB, Rivington M, Muhammed S, Newton AC, Hallett PD.  2013.  Adapting crops and cropping systems to future climates to ensure food security: the role of crop modelling. Global Food Security. 2:24-28.
Ramezanian A, Dahlin AS, Campbell CD, Hillier S, Mannerstedt-Fogelfors B, Oborn I.  2013.  Addition of a volcanic rockdust to soils has no observable effects on plant yield and nutrient status or on soil microbial activity. Plant and Soil. 367:419-436.
Pettorelli N, Evans DM, Garner TWJ, Katzner T, Gompper ME, Altwegg R, Branch TA, Johnson JA, Acevedo-Whitehouse K, DaVolls L et al..  2013.  Addressing gender imbalances in animal conservation. Animal Conservation. 16:131-133.
Hartley IP, Garnett MH, Sommerkorn M, Hopkins DW, Wookey PA.  2013.  The age of CO2 released from soils in contrasting ecosystems during the arctic winter. Soil Biology and Biochemistry. 63:1-4.
McCouch S, Baute GJ, Bradeen J, Bramel P, Bretting PK, Buckler E, Burke JM, Charest D, Cloutier S, Cole G et al..  2013.  Agriculture: Feeding the future. Nature. 499:23-24.
Lichner L, Hallett PD, Drongova Z, Czachor H, Kovacik L, Mataix-Solera J, Homolak M.  2013.  Algae influence the hydrophysical parameters of a sandy soil. Catena. 108:58-68.
Butterfield BJ, Cavieres LA, Callaway RM, Cook BJ, Kikvidze Z, Lortie CJ, Michalet R, Pugnaire FI, Schoeb C, Xiao S et al..  2013.  Alpine cushion plants inhibit the loss of phylogenetic diversity in severe environments. Ecology Letters. 16:478-486.
Staiger D, Brown JWS.  2013.  Alternative splicing at the intersection of biological timing, development, and stress responses. The Plant cell. 25:3640-3656.
Porter R, Norman RA, Gilbert L.  2013.  An alternative to killing? Treating wildlife to protect a valuable species from a shared parasite Parasitology. 140:247-257.
Wachowiak W, Iason GR, Cavers S.  2013.  Among population differentiation at nuclear genes in native Scots pine (Pinus sylvestris L.) in Scotland. Flora - Morphology, Distribution, Functional Ecology of Plants. 208:79-96.
Owen E, Daunt F, Moffat C, Elston DA, Wanless S, Thompson P.  2013.  Analysis of fatty acids and fatty alcohols reveals seasonal and sex-specific changes in the diets of seabirds. Marine Biology. 160:987-999.
Mascher M, Muehlbauer GJ, Rokhsar DS, Chapman J, Schmutz J, Barry K, Munoz-Amatriain M, Close TJ, Wise RP, Schulman AH et al..  2013.  Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ). Plant Journal. 76:718-727.
Vepsalainen S, Koivisto H, Pekkarinen E, Makinen P, Dobson G, McDougall GJ, Stewart D, Haapasalo A, Karjalainen RO, Tanila H et al..  2013.  Anthocyanin-enriched bilberry and blackcurrant extracts modulate amyloid precursor protein processing and alleviate behavioral abnormalities in the APP/PS1 mouse model of Alzheimer's disease. Journal of Nutritional Biochemistry. 24:360-370.
Reed MS, Hubacek K, Bonn A, Burt TP, Holden J, Stringer LC, Beharry-Borg N, Buckmaster S, Chapman D, Chapman PJ et al..  2013.  Anticipating and managing future trade-offs and complementarities between ecosystem services. Ecology and Society, 18, 5..
Troldborg M, Aalders I, Towers W, Hallett PD, McKenzie BM, Bengough AG, Lilly A, Ball BC, Hough RL.  2013.  Application of Bayesian Belief Networks to quantify and map areas at risk to soil threats: using soil compaction as an example. Soil Tillage and Research. 132:56-68.
Jones HG, Hillis RM, Gordon SL, Brennan RM.  2013.  An approach to the determination of winter chill requirements for different Ribes cultivars. Plant Biology. 15:18-27.
Bennett AE, Daniell TJ, Opik M, Davison J, Moora M, Zobel M, Selosse MA, Evans D.  2013.  Arbuscular mycorrhizal fungal networks vary throughout the growing season and between successional stages. PLoS ONE. 8:e83241.
Lewis TD, Rowan JS, Hawes C, McKenzie BM.  2013.  Assessing the importance of soil erosion to the seedbank biodiversity in arable agro-ecosystems. Progress in Physical Geography. 37:622-641.
Balana BB, Catacutan D, Makela M.  2013.  Assessing the willingness to pay for reliable domestic water supply via catchment management: results from a contingent valuation survey in Nairobi City, Kenya. Journal of Environmental Planning and Management. 56:1511-1531.
Card SD, Tapper BA, Lloyd-West C, Wright KM.  2013.  Assessment of fluorescein-based fluorescent dyes for tracing Neotyphodium endophytes in planta. Mycologia. 105:221-229.
Giannoccaro G, Prosperi M, Alcon F, Martin-Ortega J.  2013.  Assessment of irrigation pricing policies: a data development analysis approach. Environment and Natural Resources Research. 3:10-23.
Quin SLO, Conolly TRA, Artz RRE, Coupar A, Woodin SJ.  2013.  The assimilation and retention of carbon in upland heath plant communities typical of contrasting management regimes: a 13C tracer study. Journal of Ecosystems. 2013
Chen MH, Sheu SY, James EK, Young CC, Chen WM.  2013.  Azoarcus olearius sp.nov., a nitrogen-fixing bacterium isolated from oil-contaminated soil. International Journal of Systematic and Evolutionary Microbiology. 63:3755-3761.
Giaramida L, Manage PM, Edwards C, Singh BK, Lawton LA.  2013.  Bacterial communities' response to microcystins exposure and nutrient availability: Linking degradation capacity to community structure. International Biodeterioration and Biodegradation. 84:111-117.
Mascher M, Richmond TA, Gerhardt DJ, Himmelbach A, Clissold L, Sampath D, Ayling S, Steuernagel B, Pfeifer M, D'Ascenzo M et al..  2013.  Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond. Plant Journal. 76:494-505.
Seim GL, Ahn CI, Bodis MS, Luwedde F, Miller DD, Hillier S, Tako E, Glahn RP, Young SL.  2013.  Bioavailability of iron in geophagic earths and clay minerals, and their effect on dietary iron absorption using an in vitro digestion/Caco-2 cell model. Food and Function. 4:1263-1270.
Beesley L, Marmiroli M, Pagaono L, Pigoni V, Fellet G, Fresno T, Vamerali T, Bandiera M, Marmiroli N.  2013.  Biochar addition to an arsenic contaminated soil increases arsenic concentrations in the pore water but reduces uptake to tomato plants (Solanum lycopersicum L.). Science of the Total Environment. 454-455:598-603.
Stutter MI, Richards S, Dawson JJC.  2013.  Biodegradability of natural dissolved organic matter collected from a UK moorland stream. Water Research. 47:1169-1180.
Loades KW, Bengough AG, Bransby MF, Hallett PD.  2013.  Biomechanics of nodal, seminal and lateral roots of barley: effects of diameter, waterlogging and mechanical impedance. Plant and Soil. 370:407-418.
Hallett PD, Karim KH, Bengough AG, Otten W.  2013.  Biophysics of the Vadose Zone: from reality to model systems and back again. Vadose Zone Journal. 12
Steele K, Dickin E, Keerio MD, Samad S, Kambona C, Brook R, Thomas W, Frost G.  2013.  Breeding low-glycemic index barley for functional food. Field Crops Research. 154:31-39.
Sheu SY, Chou JH, Bontemps C, Elliott GN, Gross E, dos Reis Jr FB, Melkonian RJ, Moulin L, James EK, Sprent JI et al..  2013.  Burkholderia diazotrophica sp. nov., isolated from root nodules of Mimosa spp. International Journal of Systematic and Applied Microbiology. 63:435-441.
Bournaud C, de Faria S, Santos JMF, Tisseyre P, Silva M, Chaintreuil C, Gross E, James EK, Prin Y, Moulin L.  2013.  Burkholderia species are the most common and preferred nodulating symbionts of the Piptadenia group (Tribe Mimoseae). PLoS ONE. 8:e63478.
Vanholme R, Cesarino I, Rataj K, Xiao Y, Sundin L, Goeminne G, Kim H, Cross J, Morreel K, Araujo P et al..  2013.  Caffeoyl Shikimate Esterase (CSE) is an enzyme in the lignin biosynthetic pathway. Science. 341:1103-1106.
Sutherland LA.  2013.  Can Organic Farmers Be 'Good Farmers'? Adding the 'taste of necessity' to the conventionalization debate Agriculture and Human Values. 30:429-441.
Gilbert L.  2013.  Can restoration of afforested peatland regulate pests and disease? Journal of Applied Ecology. 50:1226-1233.
Dietrich RC, Bengough AG, Jones HG, White PJ.  2013.  Can root electrical capacitance be used to predict root mass in soil? Annals of Botany. 112:457-464.
Dunn SM, Johnston L, Taylor C, Watson H, Cook Y, Langan SJ.  2013.  Capability and limitations of a simple grid-based model for simulating land use influences on stream nitrate concentrations. Journal of Hydrology. 507:110-123.
Halpin C.  2013.  Cell biology: up against the wall. Current Biology. 23:R1048-R1050.
Raven JA.  2013.  Cells inside cells: symbiosis and continuing phagotrophy. Current Biology. 23:R530-R531.
Katzner T, Johnson JA, Evans DM, Garner TWJ, Gompper ME, Altwegg R, Branch TA, Gordon IJ, Pettorelli N.  2013.  Challenges and opportunities for animal conservation from renewable energy development. Animal Conservation. 16:367-369.
Puttock A, Macleod CJA, Bol R, Sessford P, Dungait J, Brazier RE.  2013.  Changes in ecosystem structure, function and hydrological connectivity control water, soil and carbon losses in semi-arid grass to woody vegetation transitions. Earth Surface Processes and Landforms. 38:1602-1611.
Safaiefarahani B, Mostowfizadeh-Ghalamfarsa R, Cooke DEL.  2013.  Characterisation of Phytophthora inundata according to host range, morphological variation and multigene molecular phylogeny. Phytopathologia Mediterranea. 52:46-65.
Stam R, Howden AJM, Delgado-Cerezo M, Amaro TMMM, Motion GB, Pham J, Huitema E.  2013.  Characterization of cell death inducing Phytophthora capsici CRN effectors suggests diverse activities in the host nucleus. Frontiers in Plant Science. 4
Sun Q, Liu J, Zhang Q, Qing X, Dobson G, Li X, Qi B.  2013.  Characterization of three novel desaturases involved in the delta-6 desaturation pathways for polyunsaturated fatty acid biosynthesis from Phytophthora infestans. Applied Microbiology and Biotechnology. 97:7689-7697.
Gotame TP, Andersen L, Petersen KK, Pedersen HL, Ottosen CO, Graham J.  2013.  Chlorophyll fluorescence and flowering behaviour of annual-fruiting raspberry cultivars under elevated temperature regimes. European Journal of Horticultural Science. 78:193-202.
Munang R, Thiaw I, Alverson K, Mumba M, Liu J, Rivington M.  2013.  Climate change and ecosystem-based adaptation: a new pragmatic approach to buffering climate change impacts. Current Opinion in Environmental Sustainability. 5:67-71.
Rivington M, Matthews KB, Buchan K, Miller DG, Bellocchi G, Russell G.  2013.  Climate change impacts and adaptation scope for agriculture indicated by agro-meteorological metrics. Agricultural Systems. 114:15-31.
Dinnie E, Brown KM, Morris S.  2013.  Community, cooperation and conflict: negotiating the social wellbeing benefits of urban greenspace experience. Landscape and Urban Planning. 112:1-9.
Lusser M, Davies HV.  2013.  Comparative regulatory approaches for groups of new plant breeding techniques. New Biotechnology. 30:437-446.
Kenyon F, McBean D, Greer AW, Burgess CGS, Morrison AA, Bartley DJ, Bartley Y, Devin L, Nath M, Jackson F.  2013.  A comparative study of the effects of four treatment regimes on ivermectin efficacy, body weight and pasture contamination in lambs naturally infected with gastrointestinal nematodes in Scotland. International Journal for Parasitology - Drugs and Drug Resistance. 3:77-84.
Farruga K, Brandey K, Dawson LA, NicDaeid NN.  2013.  A comparison of enhancement techniques for footwear impressions on dark and patterned fabrics. Journal of Forensic Sciences. 58:1472-1485.
Chapman SJ, Bell JS, Campbell CD, Hudson G, Lilly A, Nolan AJ, Robertson AHJ, Potts JM, Towers W.  2013.  Comparison of soil carbon stocks in Scottish soils between 1978 and 2009. European Journal of Soil Science. 64:455-465.
Kamei H, Cock PJA.  2013.  Computation of balanced equivalence relations and their lattice for a coupled cell network. Siam Journal on Applied Dynamical Systems. 12:352-382.
Rhind SM, Kyle CE, Kerr C, Osprey M, Zhang ZL, Duff EI, Lilly A, Nolan A, Hudson G, Towers W et al..  2013.  Concentrations and geographic distribution of selected organic pollutants in Scottish surface soils. Environmental Pollution. 182:15-27.
Brooker RW, Kikvidze Z, Kunstler G, Liancourt P, Seifan M.  2013.  The concept and measurement of importance: a comment on Rees et al. 2012. Journal of Ecology. 101:1369-13789.
Sutherland LA, Mills J, Ingram J, Burton RJF, Dwyer J, Blackstock KL.  2013.  Considering the source: Commercialisation and trust in agri-environmental information and advisory services in England. Journal of Environmental Management. 118:96-205.
Sharma SK, Bolser D, de Boer J, Sonderkaer M, Amoros W, Carboni MF, D'Ambrosio JM, de la Cruz G, Di Genova A, Douches DS et al..  2013.  Construction of reference chromosome-scale Pseudomolecules for potato: integrating the potato genome with genetic and physical maps. G3-Genomes Genomes Genetics. 3:2031-2047.
Gregory PJ, Atkinson CJ, Bengough AG, Else MA, Fernandez-Fernandez F, Harrison RJ, Schmidt S.  2013.  Contributions of roots and rootstocks to sustainable, intensified crop production. Journal of Experimental Botany. 64:1209-1222.
McCallum S, Cullen DW, Hedley P, Simpson C, Hancock RD, Milne L, Hackett CA, Graham J.  2013.  Control of fruit quality traits in red raspberry, a review from the James Hutton Institute. Aspects of Applied Biology. 119:1-16.
Whitehead PG, Crossman J, Balana BB, Futter MN, Comber S, Jin L, Skuras D, Wade AJ, Bowes MJ, Read DS.  2013.  A cost-effectiveness analysis of water security and water quality: impacts of climate and land-use change on the River Thames system. Philosophical Transactions of the Royal Society, Series A. 371:201204B.
Reynolds B, Chamberlain PM, Poskitt J, Woods C, Scott WA, Rowe EC, Robinson DA, Frogbrook ZL, Keith AM, Henrys PA et al..  2013.  Countryside survey: National "Soil Change" 1978-2007 for topsoils in Great Britain - acidity, carbon, and total nitrogen status. Vadose Zone Journal. 12
Meier-Augenstein W, Hobson KA, Wassenaar LI.  2013.  Critique: measuring hydrogen stable isotope abundance of proteins to infer origins of wildlife, food and people. Bioanalysis. 5:751-767.
Sprent JI, Meeks JC.  2013.  Cyanobacterial nitrogen fixation in association with feather mosses: moss as boss? New Phytologist. 200:5-6.
Lukhovitskaya NI, Thaduri S, Garushyants SK, Torrance L, Savenkov EI.  2013.  Deciphering the mechanism of defective interfering RNA (DI RNA) biogenesis reveals that a viral protein and the DI RNA act antagonistically in virus infection. Journal of Virology. 87:6091-6103.
Atkinson CJ, Brennan RM, Jones HG.  2013.  Declining chilling and its impact on temperate perennial crops. Environmental and Experimental Botany. 91:48-62.
Welch D, Scott D, Elston DA.  2013.  Declining incidence of multi-trunking over time in a Scottish plantation of Picea sitchensis. Scandinavian Journal of Forest Research. 28:17-27.
Tilston EL, Halpin C, Hopkins DW.  2013.  Decomposition of tobacco roots with modified phenylpropanoid content by fungi with contrasting lignocellulose degradation strategies. Biology and Fertility of Soils. 49:305-311.
Waylen KA, Fischer A, McGowan PJK, Milner-Gulland EJ.  2013.  Deconstructing community for conservation: why simple assumptions are not sufficient. Human Ecology. 41:575-585.
Pritchard L, Humphris S, Saddler GS, Parkinson NM, Bertrand V, Elphinstone JG, Toth IK.  2013.  Detection of phytopathogens of the genus Dickeya using a PCR primer prediction pipeline for draft bacterial genome sequences. Plant Pathology. 62:587-596.
Bartley PM, Katzer F, Rocchi MS, Maley SW, Benavides J, Nath M, Pang Y, Canton G, Thomson J, Chianini F et al..  2013.  Development of maternal and foetal immune responses in cattle following experimental challenge with Neospora caninum at day 210 of gestation. Veterinary Research. 44
Mahbub A, Le Maitre CL, Haywood-Small SL, McDougall GJ, Cross NA.  2013.  Differential effects of polyphenols on proliferation and apoptosis in human myeloid and lymhoid leukemia cell lines. Anti-Cancer Agents in Medicinal Chemistry. 13:1601-1613.
Schoeb C, Armas C, Pugnaire FI.  2013.  Direct and indirect interactions co-determine species composition in nurse plant systems. Oikos. 122:1371-1379.
Rushworth AM, Bowman AW, Brewer MJ, Langan SJ.  2013.  Distributed lag models for hydrological data. Biometrics. 69:537-544.
Andrews M, Raven JA, Lea PJ.  2013.  Do plants need nitrate? The mechanisms by which nitrogen form affects plants Annals of Applied Biology. 163:174-199.
Johnson SN, Mitchell C, McNicol JW, Thompson J, Karley AJ.  2013.  Downstairs drivers - root herbivores shape communities of above-ground herbivores and natural enemies via changes in plant nutrients. Journal of Animal Ecology. 82:1021-1030.
Shand CA, Rosen K, Thored K, Wendler R, Hillier SJ.  2013.  Downward migration of radiocaesium in organic soils across a transect in Scotland. Journal of Environmental Radioactivity. 115:124-133.
Pritchard L, Humphris S, Saddler GS, Elphinstone JG, Pirhonen M, Toth IK.  2013.  Draft Genome Sequences of 17 isolates of the plant pathogenic bacterium Dickeya. Genome Announcements. 1:e00978-13.
Pritchard L, Humphris S, Baeyen S, Maes M, Van Vaerenbergh J, Elphinstone J, Saddler G, Toth IK.  2013.  Draft genome sequences of four Dickeya dianthicola and four Dickeya solani strains. Genome Announcements. 1:e0087-12.
Gushchin VA, Lukhovitskaya NI, Andreev DE, Wright KM, Taliansky ME, Solovyev AG, Morozov S, MacFarlane SA.  2013.  Dynamic localization of two tobamovirus ORF6 proteins involves distinct organellar compartments. Journal of General Virology. 94:230-240.
Bennett AE, Macrae A, Moore BD, Caul S, Johnson SN.  2013.  Early root herbivory impairs arbuscular mycorrhizal fungal colonization and shifts defence allocation in Plantago lanceolata. PLoS ONE. 8:e66053.
Andow DA, Lovei GL, Arpaia S, Wilson L, Fontes EMG, Hilbeck A, Lang A, Van Tuat N, Pires CSS, Sujii ER et al..  2013.  An ecologically-based method for selecting ecological indicators for assessing risks to biological diversity from genetically-engineered plants. Journal of Biosafety. 22:141-156.
Gomez-Limon JA, Martin-Ortega J.  2013.  The economic analysis in the implementation of the water framework directive in Spain. International Journal of River Basin Management. 11:301-310.
Nijnik M, Pajot G, Moffat A, Slee B.  2013.  An economic analysis of the establishment of forest plantations in the United Kingdom to mitigate climatic change. Forest Policy and Economics. 26:34-42.
Aspinall R, Gregory P.  2013.  Ecosystem services: nature's balance sheet. Science. 342:421-421.
Steiner HY, Halpin C, Jez JM, Kough J, Parrott W, Underhill L, Weber N, Hannah LC.  2013.  Editor's choice: Evaluating the potential for adverse interactions within genetically engineered breeding stacks. Plant Physiology. 161:1587-1594.
Mehmood F, Rashid A, Mahmood T, Dawson LA.  2013.  Effect of DTPA on Cd solubility in soil - accumulation and subsequent toxicity to lettuce. Chemosphere. 90:1805-1810.

Printed from /publications/publications-list?page=13 on 31/05/23 01:17:01 AM

The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.