Publications list
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2018.
The epiphytic bryophyte community of Atlantic oak woodlands shows clear signs of recovery following the removal of invasive Rhododendron ponticum. Biological Conservation. 212:96-104.
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2017.
Invasion by Rhododendron ponticum depletes the native seed bank with long-term impacts after its removal. Biological Invasions. 20:375-384.
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2018.
Rural geographies in the wake of non-representational theories. Geography Compass. :ArticleNo.e12446.
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2019.
Affective lives of rural ageing. Sociologia Ruralis. 58:213-234.
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2018.
Association mapping in a simulated barley population. Euphytica. 183:337-347.
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2012.
Digital catchment observatories: a platform for engagement and knowledge exchange between catchment scientists, policy makers, and local communities. Water Resources Research. 51:4815-4822.
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2015.
The water energy food nexus - challenges and emerging solutions. Environmental Science: Water Research and Technology. 1:15-16.
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2015.
Drinking water purity - a UK perspective. Environmental Science: Water Research and Technology. 1:268-271.
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2015.
Tobraviruses - plant pathogens and tools for biotechnology (Review). Molecular Plant Pathology. 11:577-583.
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2010.
Genome activation by Raspberry bushy dwarf virus coat protein. Journal of General Virology. 90:747-753.
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2009.
(Poly)phenols protect from alpha-synuclein toxicity by reducing oxidative stress and promoting autophagy. Human Molecular Genetics. 24:1717-1732.
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2015.
(Poly)phenol-digested metabolites modulate alpha-synuclein toxicity by regulating proteostasis. Scientific Reports. 8:ArticleNo.6965..
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2018.
Defoliation and fertiliser influences on the soil microbial community associated with two contrasting Lolium perenne cultivars. Soil Biology and Biochemistry. 38(4):674-682.
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2006.
Long-term impacts of zinc and copper enriched sewage sludge additions on bacterial, archaeal and fungal communities in arable and grassland soils. Soil Biology and Biochemistry. 43:932-941.
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2011.
Identifying qualitative effects of different grazing types on below-ground communities and function in a long-term field experiment. Environmental Microbiology. 17:841-854.
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2014.
Microbial DNA profiling by multiplex terminal restriction fragment length polymorphism for forensic examination of soil evidence and the influence of sample condition. Journal Applied Microbiology. 105(3):813-821.
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2008.
Physiological, biochemical and molecular responses of soil microbial community after afforestation of pastures with Pinus radiata. Soil Biology and Biochemistry. 41(8):1642-1651.
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2009.
Long-term exposure to Zn-spiked sewage sludge alters soil community structure. Soil Biology and Biochemistry. 39(10):2576-2586.
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2007.
Assessing national nutrition security: The UK reliance on imports to meet population energy and nutrient recommendations. PLoS ONE. 13:ArticleNo.e0192649.
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2018.
Sustainable diets for the future: can we contribute to reducing greenhouse gas emissions by eating a healthy diet? American Journal of Clinical Nutrition. 96:632-639.
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2012.
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2020.
More than just fish food: ecosystem services provided by freshwater insects. Ecological Entomology. 40:113-124.
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2015.
Inorganic carbon acquisition by chrysophytes. Journal of Phycology. 45:1052-1061.
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2009.
Women and Global South strikingly under-represented among top-publishing ecologists. Conservation Letters. 14:ArticleNo.e12797.
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2021.
Rice responses to soil management in rice-based cropping system in the semi-arid tropics of southern Lombok, Eastern Indonesia. Field Crops Research. 110:197-206. Abstract
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2009.
A novel, efficient and sustainable magnetic sludge biochar modified by graphene oxide for environmental concentration imidacloprid removal. Journal of Hazardous Materials. 407:ArticleNo.124777.
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2021.
Adsorptive removal of imidacloprid by potassium hydroxide activated magnetic sugarcane bagasse biochar: adsorption efficiency, mechanism and regeneration. Journal of Cleaner Production. 292:ArticleNo.126005.
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2021.
Identification of a fluorometabolite from Streptomyces sp MA37: (2R3S4S)-5-fluoro-2,3,4-trihydroxypentanoic acid. Chemical Science. 6:1414-1419.
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2015.
Hydrothermal synthesis of magnetic sludge biochar for tetracycline and ciprofloxacin adsorptive removal. Bioresource Technology. 318:ArticleNo.124199.
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2021.
Highly efficient removal of imidacloprid using potassium hydroxide activated magnetic microporous loofah sponge biochar. Science of the Total Environment. 765:ArticleNo.144253.
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2021.
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2007.
Functional effects of a common single-nucleotide polymorphism (GPX4c718t) in the glutathione peroxidase 4 gene: Interaction with sex. American Journal of Clinical Nutrition. 87:1019-1027. Abstract
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2008.
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2013.
Isolation, analysis and marker utility of novel miniature inverted repeat transposable elements from the barley genome. Molecular Genetics and Genomics. 280:275-285. Abstract
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2008.
Cruciferous vegetables and colo-rectal cancer. Proceedings of the Nutrition Society. 65(1):135-144.
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2006.
Impacts of the use of nonnative commercial bumble bees for pollinator supplementation in raspberry. Journal of Economic Entomology. 104:107-114.
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2011.
Root responses to cadmium in the rhizosphere: a review. Journal of Experimental Botany. 62:21-37.
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2011.
Surface hoar characteristics derived from a snow micropenetrometer using moving window statistical operations. Cold Regions Science and Technology. 47(1-2):118-133.
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2007.
Comparative regulatory approaches for groups of new plant breeding techniques. New Biotechnology. 30:437-446.
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2013.
Patchy promiscuity: machine learning applied to predict the host specificity of Salmonella enterica and Escherichia coli. Microbial Genomics, 3, (Open Access).
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2017.
UV direct photolysis of sulfamethoxazole and ibuprofen: An experimental and modelling study. Journal of Hazardous Materials. 343:132-139.
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2018.
Constructing genetic linkage maps under a tetrasomic model. Genetics. 172:2635-2645. Abstract
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2006.
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2007.
UV direct photolysis of sulfamethoxazole and ibuprofen: An experimental and modelling study. Journal of Hazerdous Materials. 343:132-139.
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2018.
Sample collection protocol effects on quantification of gene expression in potato leaf tissue. Plant Molecular Biology Reporter. 29:369-378.
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2011.
The relationship between water-soluble P and modified Morgan P: results based on data and chemical modelling. Soil Use and Management. 32:162-171.
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2016.
Comment on "Fertilization and pH effects on processes and mechanisms controlling dissolved inorganic phosphorus in soils" by Nicolas Devau et al. (2011). Geochimica et Cosmochimica Acta. 92:260-264.
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2012.
The relationship between water extractable P and modified Morgan P: results based on data and chemical modelling. Soil Use and Management. 32:162-171.
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2016.
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2013.
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2015.
Investigation of sterols as potential biomarkers for the detection of pig (S. s. domesticus) decomposition fluid in soils. Forensic Science International. 230:68-73.
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2013.
Temporal fatty acid profiles of human decomposition fluid in soil. Organic Geochemistry. 111:26-33.
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2017.
First evidence of terrestrial ambrein formation in human adipocere. Scientific Reports. 9:ArticleNo.18370.
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2019.
Steroid fingerprints: Efficient biomarkers of human decomposition fluids in soil. Organic Geochemistry. 124:228-237.
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2018.
Mapping European and forest related policies supporting social innovation for rural settings. Forest Policy and Economics. 97:146-152.
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2018.
The ethnobiology of contemporary British foragers: foods they teach, their sources of inspiration and impact. Sustainability. 13:ArticleNo.3478.
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2021.
Newly identified RNAs of raspberry leaf blotch virus encoding a related group of proteins. Journal of General Virology. 96:3432-3439.
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2015.
Impacts of soil and water pollution on food safety and health risks in China. Environment International. 77:5-15.
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2015.
Forty years of reform and opening up: China's progress toward a sustainable path. Science Advances. 5:ArticleNo.eaau9413.
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2019.
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2021.
The unfolded protein response and programmed cell death are induced by expression of garlic virus X p11 in Nicotiana benthamiana. Journal of General Virology. 97:1462-1468.
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2016.
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2013.
Impacts of soil and water pollution on food safety and health risks in China. Environment International. 77:5-15.
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2014.
When facilitation meets clonal integration in forest canopies. New Phytologist. 225:135-142.
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2019.
When facilitation meets clonal integration in forest canopies. New Phytologist. 225:135-142.
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2019.
La cuisine ceremonielle de la Fete des Morts (Mexique). Food and History. 6(2):133-154.
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2008.
On the role of women in bushmeat hunting - insights from Tanzania and Ethiopia. Journal of Rural Studies. 28:622-630.
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2012.
Failure to transmit scrapie infection by transferring preimplantation embryos from naturally infected donor sheep. Theriogenology. 72:809-816.
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2009.
Elaidic acid, (trans-9-octadecenoic acid). Acta Crystallographica Section E-Structure Reports Online. E61:3730-3732. Abstract
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2005.
A systematic review of the health and well-being benefits of biodiverse environments. Journal of Toxicology and Environmental Health, Part B: Critical Reviews. 17:1-20.
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2014.
A genetically modified tobacco mosaic virus that can produce gold nanoparticles from a metal salt precursor. Frontiers in Plant Science. 6
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2015.
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2012.
A Brassica exon array for whole-transcript gene expression profiling. PLoS One. 5:-e12812.
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2010.
In planta production of a candidate vaccine against bovine papillomavirus type 1. Planta. 236:1305-1313.
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2012.
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2014.
Cajal bodies and their role in plant stress and disease responses. RNA Biology. 14:779-790.
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2016.
Diversity of human colonic butyrate-producing bacteria revealed by analysis of the butyryl-CoA:acetate CoA-transferase gene. Environmental Microbiology. 12:304-314.
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2010.
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2018.
Network motifs involving both competition and facilitation predict biodiversity in alpine plant communities. Proceedings of the National Academy of Sciences of the USA (PNAS). 118:ArticleNo.e2005759118.
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2021.
Imprinting methylation in SNRPN and MEST1 in adult blood predicts cognitive ability. PLoS ONE. 14:ArticleNo.e0211799.
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2019.
Does soil warming affect the interaction between Pasteuria penetrans and Meloidogyne javanica in tomato plants? Plant Pathology. 67:1777-1783.
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2018.
Variable ITS-copy number at different developmental stages of Meloidogyne hapla and M. chitwoodi. European Journal of Plant Pathology. 154:843-848.
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2019.
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2012.
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2014.
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2014.
Characterisation of barley landraces from Syria and Jordan for resistance to rhynchosporium and identification of diagnostic markers for Rrs1Rh4. Theoretical and Applied Genetics. 133:1243-1264.
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2020.
Resistance to Rhynchosporium commune in a collection of European spring barley germplasm. Theoretical and Applied Genetics. 131:2513-2528.
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2018.
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2015.
Association mapping of diastatic power in UK winter and spring barley by exome sequencing of phenotypically contrasting variety sets. Frontiers in Plant Science. 8:ArticleNo.1566.
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2017.
Risk assessments for quality-assured, source-segregated composts and anaerobic digestates for a circular bioeconomy in the UK. Environment International. 127:253-266.
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2019.
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2013.
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2006.
Exploiting knowledge of R/Avr genes to rapidly clone a new LZ-NBS-LRR family of late blight resistance genes from potato linkage group IV. Molecular Plant-Microbe Interactions. 22:630-641.
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2009.
Cellular responses to the metal-binding properties of metformin. Diabetes. 61:1423-1433.
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2012.
Regulation of hepatic glucose production and AMPK by AICAR but not by metformin depends on drug uptake through the equilibrative nucleoside transporter 1 (ENT1). Diabetes, Obesity and Metabolism. 20:2748-2758.
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2018.
Activity pattern of arctic reindeer in a predator-free environment - no need to keep a daily rhythm. Oecologia. 152(4):617-624.
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2007.
Antler growth as a cost of reproduction in female reindeer. Oecolgia. 189:601-609.
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2019.
Behavioral buffering of extreme weather events in a high- Arctic herbivore. Ecosphere. 7:1-13.
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2016.
Testing five hypotheses of sexual segregation in an arctic ungulate. Journal of Animal Ecology. 75(2):485-496.
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2006.
The neglected season: warmer autumns counteract harsher winters and promote growth in Arctic reindeer. Global Change Biology. 27:993-1002.
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2020.
Behavioral buffering of extreme weather events in a high- Arctic herbivore. Ecosphere. 7:ArticleNo.e01374..
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2016.
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2012.
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2011.
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2013.
Glucose uptake by the brain on chronic high-protein weight-loss diets with either moderate or low amounts of carbohydrate. British Journal of Nutrition. 111:586-597.
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2014.
Impact of high protein diets with either moderate or low carbohydrate on weight loss, body composition, blood pressure and glucose tolerance in rats. British Journal of Nutrition. 97:1099-1108. Abstract
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2007.
Responses in gut hormones and hunger to diets with either high protein or a mixture of protein plus free amino acids supplied under weight-loss conditions. British Journal of Nutrition. 113:1254-1270.
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2015.
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2015.
Biomechanics of nodal, seminal and lateral roots of barley: effects of diameter, waterlogging and mechanical impedance. Plant and Soil. 370:407-418.
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2013.
Planting density influence on fibrous root reinforcement of soils. Ecological Engineering. 36:276-284. Abstract
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2010.
Protein energy malnutrition during early gestation in sheep blunts fetal renal vascular and nephron development and compromises adult renal function. Journal of Physiology. 590:377-393.
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2012.
Impacts of residence time during storage on potential of water saving for grey water recycling system. Water Research. 44(1):267-277.
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2010.
Biomass partitioning and rhizosphere responses of maize and faba bean to phosphorus deficiency. Crop and Pasture Science. 67:847-856.
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2016.
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2018.
Patterns of diversifying selection in the phytotoxin-like scr74 gene family of Phytophthora infestans. Molecular Biology and Evolution. 22:659-672. Abstract
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2005.
Farmers' uptake of animal health and welfare technological innovations. Implications for animal health policies. Frontiers in Veterinary Science. 6:ArticleNo.410.
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2019.
A longitudinal study of escalation in crime seriousness. Journal of Quantitative Criminology. 27:175-196.
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2011.
Kinetic constraints for formation of steady states in biochemical networks. Biophysical Journal. 88:3212-3223. Abstract
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2005.
Yield loss of oilseed rape (Brassica napus L.) under nitrogen deficiency is associated with under-regulation of plant population density. European Journal of Agronomy. 103:80-89.
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2019.
Global wheat production with 1.5 and 2.0 degrees C above pre-industrial warming. Global Change Biology. 25:1428-1444.
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2019.
Highly parallel gene-to-BAC addressing using microarrays. Biotechniques. 50:165-174.
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2011.
Counter urbanisation, planning and house prices: an analysis of the Aberdeen housing market area, 1984 - 2010. Town Planning Review. 84:81-105.
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2013.
Pretreatment is an important method for increasing the conversion efficiency of rice straw by black soldier fly larvae based on the function of gut microorganisms. Science of the Total Environment. 762:ArticleNo.144118.
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2021.
Collapse of single stable states via a fractal attraction basin: analysis of a representative metabolic network. Proceedings of the Royal Society of London Series A. 461:2327-2338. Abstract
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2005.
Partitioning of soil phosphorus among arbuscular and ectomycorrhizal trees in tropical and subtropical forests. Ecology Letters. 21:713-723.
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2018.
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2014.
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2008.
Dissipation and maintenance of stable states in an enzymatic system: analysis and simulation. Biophysical Chemistry. 120:207-214. Abstract
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2006.
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2005.
Burkholderia and Cupriavidus spp. are the preferred symbionts of Mimosa spp. in Southern China. FEMS Microbiology Ecology. 80:417-426.
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2012.
Storage nitrogen co-ordinates leaf expansion and photosynthetic capacity in winter oilseed rape. Journal of Experimental Botany. 69:2995-3007.
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2018.
A genetic screen for plant mutants with altered nodulation phenotypes in response to rhizobial glycan mutants. New Phytologist. 220:526-538.
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2018.
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2014.
Farmers' uptake of animal health and welfare technological innovations. Implications for animal health policies. Frontiers in Veterinary Science. 6:ArticleNo.410.
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2019.
Moorland restoration aids the reassembly of associated phytophagous insects. Biological Conservation. 132(3):395-404.
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2006.
Science into practice - how can fundamental science contribute to better management of grasslands for invertebrates? Insect Conservation and Diversity. 5:1-8.
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2012.
Grazing impacts on moth diversity and abundance on a Scottish upland estate. Insect Conservation and Diversity. 1:151-160.
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2008.
Long-term trends in restored moorland vegetation assemblages. Community Ecology.. 15:104-112.
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2014.
Invertebrate species at risk from ash dieback in the UK. Journal of Insect Conservation. 19:75-85.
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2015.
Grazing impacts on Auchenorrhyncha diversity and abundance on a Scottish upland estate. Insect Conservation and Diversity. 5:67-74.
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2012.
Use of a novel camera trapping approach to measure small mammal responses to peatland restoration. European Journal of Wildlife Research. 67:ArticleNo.12.
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2021.
A field assessment of the success of moorland restoration in the rehabilitation of whole plant assemblages. Applied Vegetation Science. 9(2):295-306.
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2006.
Isolation of habitat patches limits colonisation by moorland Hemiptera. Journal of Insect Conservation. 13:29-36.
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2009.
The response of plant and insect assemblages to the loss of Calluna vulgaris from upland vegetation. Biological Conservation. 128(3):335-345.
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2006.
A habitat suitability model for the narrow-headed ant formica exsecta evaluated against independent data. Insect Conservation and Diversity. 1(2):108-113.
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2008.
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2014.
Using agent-based modelling to simulate social-ecological systems across scales. Geoinformatica. 23:269-298.
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2019.
Unraveling the structure of viral replication complexes at super-resolution. Frontiers in Plant Science. 4
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2013.
Biotic modifiers, environmental modulation and species distribution models. Journal of Biogeography. 39:2179-2190.
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2012.
Editorial. Journal of Biogeography. 46:1625-1626.
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2019.
Spatial distribution of sporocarps of stipitate hydnoid fungi and their belowground mycelium. FEMS Microbiology Ecology. 69(3):344-352.
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2009.
Now you see it, now you don't: The challenge of detecting, monitoring and conserving ectomycorrhizal fungi. Fungal Ecology. 5:633-640.
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2012.
A PCR-based method for detecting the mycelia of stipitate hydnoid fungi in soil. Journal of Microbiological Methods. 75(1):40-46.
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2008.
Pregnant ewes exposed to multiple endocrine disrupting pollutants through sewage sludge-fertilised pasture show an anti-estrogenic effect in their trabecular bone. The Science of the Total Environment. 408:2340-2346.
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2010.
Exposure to pastures fertilised with sewage sludge disrupts bone tissue homeostasis in sheep. The Science of the Total Environment. 407(7):2200-2208.
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2009.
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2016.
Effect of composting on the conjugative transmission of sulfonamide resistence and sulfonamide-resistant baterial population. Journal of Cleaner Production. 285:ArticleNo.125483.
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2021.
Simultaneous reductions in antibiotics and heavy metal pollution during manure composting. Science of the Total Environment. 788:ArticleNo.147830.
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2021.
Hydropedology: synergistic integration of pedology and hydrology. Water Resources Research. 42(5):W05301.
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2006.
Genetic diversity of the subterranean Gansu zokor in a semi-natural landscape. Journal of Zoology. 275(2):153-159.
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2008.
Genetic variation and molecular evolution of endangered Kozlov's pika (Ochotona Koslowi Buchner) based on mitochondrial cytochrome B gene. Polish Journal of Ecology. 58(3):563-568.
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2010.
Effects of manure and mineral fertilization strategies on soil antibiotic resistance gene levels and microbial community in a paddy-upland rotation system. Environmental Pollution. 211:332-337.
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2016.
RLP/K enrichment sequencing; a novel method to identify receptor-like protein (RLP) and receptor-like kinase (RLK)genes. New Phytologist. Published online..
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2020.
A compositional shift in the soil microbiome induced by tetracycline, sulfamonomethoxine and ciprofloxacin entering a plant-soil system. Environmental Pollution. 212:440-448.
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2016.
Fate of tetracycline and sulfonamide resistance genes in a grassland soil amended with different organic fertilizers. Ecotoxicology and Environmental Safety. 170:39-46.
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2019.
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2020.
Effects of manure and mineral fertilization strategies on soil antibiotic resistance gene levels and microbial community in a paddy-upland rotation system. Environmental Pollution. 211:332-337.
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2016.
Climatic modifiers of the response to nitrogen deposition in peat-forming Sphagnum mosses: a meta-analysis. New Phytologist. 191:496-507.
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2011.
Glasshouse vs field experiments: do they yield ecologically similar results for assessing N impacts on peat mosses? New Phytologist. 195:408-418.
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2012.
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2012.
Magnetic ligand fishing using immobolized DPP-IV for identification of antidiabetic ligands in lingonberry extract. PLOS ONE. 16:ArticleNo.e0247329.
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2021.
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2018.
The potential for Scottish cultivated top soils to lose or gain soil organic carbon. Soil Use and Management. 29:39-47.
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2013.
Spatial modelling of nitrous oxide emissions at the national scale by upscaling using soil, climate and land use information. Global Change Biology. 15:2321-2332.
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2009.
Assessing changes in carbon stocks of Scottish soils: lessons learnt. Earth and Environmental Science. 25:ArticleNo.01201.
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2015.
Probabilistic approach to the identification of input variables to estimate hydraulic conductivity. Soil Science Society of America Journal. 72(1):16-24.
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2008.
Changes in the carbon concentrations and other soil properties of some Scottish agricultural soils: Evidence from a resampling campaign. Soil Use and Management. 36:299-307.
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2020.
Effector gene birth in plant parasitic nematodes: Neofunctionalization of a housekeeping glutathione synthetase gene. PLoS Genetics. 14:ArticleNo.e1007310.
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2018.
Fine mapping of a major QTL for awn length in barley using a multiparent mapping population. Theoretical and Applied Genetics. 130:269-281.
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2017.
Can you be bothered? The role of participant motivation in the valuation of species conservation measures Journal of Environmental Planning and Management. 52(4):519-534.
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2009.
Data for life cycle assessment of legume biorefining for alcohol. Data in Brief. 25:ArticleNo.UNSP104242.
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2019.
Just the tonic! Legume biorefining for alcohol has the potential to reduce Europe’s protein deficit and mitigate climate change. Environment International. 130:ArticleNo.104870.
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2019.
Vegetation impact on the hydrology of an aeolian sandy soil in a continental climate. Ecohydrology. 3:413-420.
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2010.
Algae influence the hydrophysical parameters of a sandy soil. Catena. 108:58-68.
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2013.
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2007.
Dynamics of microbial biomass and community composition after short-term water status change in Chinese paddy soils. Environmental Science and Pollution Research. 25:2932-2941.
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2018.
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2017.
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2017.
Phosphatase-mediated bioprecipitation of lead by soil fungi. Environmental Microbiology. 18:219-231.
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2016.
Modelling the seismic performance of root-reinforced slopes using the finite-element method. Geotechnique. 70:375-391.
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2020.
Group size affects foraging and vigilance in migratory Tibetan antelope. Behavioural Processes. 76(3):192-197.
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2007.
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2011.
Hierarchical Bayesian model approach for estimating soil CO2 flux: a case study in central Hokkaido, Japan. Soil Science and Plant Nutrition. 61:116-132.
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2015.
Utilizing low-cost natural waste for the removal of pharmaceuticals from water: Mechanisms, isotherms and kinetics at low concentrations. Journal of Cleaner Production. 227:88-97.
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2019.
A novel cleavage site within the potato leafroll virus P1 polyprotein. Journal of General Virology. 88:1620-1623. Abstract
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2007.
Comparative genome and transcriptome analysis unravels key factors of nitrogen use efficiency in Brassica napus L. Plant Cell and Environment. 43:712-731.
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2020.
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2019.
Nitrification and nitrifiers in acidic soils. Soil Biology and Biochemistry. 116:290-301.
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2018.
Biological nitrification inhibition by sorghum root exudates impacts ammonia-oxidizing bacteria but not ammonia-oxidizing archaea. Biology and Fertility of Soils. 57:399-407.
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2021.