Skip to navigation Skip to content

Publications list

Found 5892 results

Sherstnev A, Duc C, Cole C, Zacharaki V, Hornyik C, Ozsolak F, Milos PM, Barton GJ, Simpson GG.  2012.  Direct sequencing of Arabidopsis thaliana RNA reveals patterns of cleavage and polyadenylation. Nature Structural and Molecular Biology. 19:845-852.
Roberts DM, Schofield P, Donn S, Daniell TJ.  2012.  Directed terminal restriction analysis tool (DRAT): an aid to enzyme selection for directed terminal restriction fragment length polymorphisms. Methods in Ecology and Evolution. 3:24-28.
Carlsson AM, Irvine RJ, Wilson K, Piertney SB, Halvorsen O, Coulson SJ, Stien A, Albon SD.  2012.  Disease transmission in an extreme environment: Nematode parasites infect reindeer during the Arctic winter. International Journal for Parasitology. 42:789-795.
Rios JJ, Ó Lochlainn S, Devonshire J, Graham NS, Hammond JP, King GJ, White PJ, Kurup S, Broadley MR.  2012.  Distribution of calcium (Ca) and magnesium (Mg) in the leaves of Brassica rapa under varying exogenous Ca and Mg supply. Annals of Botany. 109:1081-1089.
Phosri C, Polme S, Taylor AFS, Koljalg U, Suwannasai N, Tedersoo L.  2012.  Diversity and community composition of ectomycorrhizal fungi in a dry deciduous dipterocarp forest in Thailand. Biodiversity and Conservation, 21, 2287-2298..
Trinder C, Brooker R, Davidson H, Robinson D.  2012.  Dynamic trajectories of growth and nitrogen capture by competing plants. New Phytologist. 193:948-958.
Lockyer AE, Emery AM, Kane RA, Walker AJ, Mayer CD, Mitta G, Coustau C, Adema CM, Hanelt B, Rollinson D et al..  2012.  Early differential gene expression in haemocytes from resistant and susceptible biomphalaria glabrata strains in response to schistosoma mansoni. PLoS ONE, e511020. 7
Martin-Ortega J.  2012.  Economic prescriptions and policy applications in the implementation of the Water Framework Directive. Environmental Science and Policy. 24:83-91.
Mesa-Jurado MA, Martin-Ortega J, Ruto E, Berbel J.  2012.  The economic value of guaranteed water supply for irrigation under scarcity conditions. Agricultural Water Management. 113:10-18.
Raven JA, Hurd CL.  2012.  Ecophysiology of photosynthesis in macroalgae. Photosynthesis Research. 113:105-125.
Pakeman RJ, Small JL, Torvell L.  2012.  Edaphic factors influence the longevity of seeds in the soil. Plant Ecology. 213:57-65.
Weber N, Halpin C, Hannah LC, Jez JM, Kough J, Parrott W.  2012.  Editor's Choice: crop genome plasticity and its relevance to food and feed safety of genetically engineered breeding stacks. Plant Physiology. 160:1842-1853.
Lees AK, Stewart JA, Lynott JS, Carnegie SF, Campbell H, Roberts AMI.  2012.  The effect of a dominant Phytopthora infestans genotype (13_A2) in Great Britain on host resistance to foliar late blight in commercial potato cultivars. Potato Research. 55:125-134.
Thies F, Masson LF, Rudd A, Vaughan N, Tsang C, Brittenden J, Simpson WG, Duthie S, Horgan GW, Duthie G.  2012.  Effect of a tomato-rich diet on markers of cardiovascular disease risk in moderately overweight, disease-free, middle-aged adults: a randomized controlled trial. American Journal of Clinical Nutrition. 95:1013-1022.
Gilbert L, Maffey G, Ramsay SL, Hester AJ.  2012.  The effect of deer management on the abundance of Ixodes ricinus in Scotland. Ecological Applications. 22:658-667.
Zebarth BJ, Tai H, Luo SN, Millard P, De Koeyer D, Li XQ, Xiong XY.  2012.  Effect of nitrogen form on gene expression in leaf tissue of greenhouse grown potatoes during three stages of growth. American Journal of Potato Research. 89:315-327.
Chen W, Prell J, James EK, Sheu D, Sheu S.  2012.  Effect of phosphoglycerate mutase and fructose 1,6-bisphosphatase deficiency on free-living and symbiotic Burkholderia phymatum. Microbiology-SGM. 158:1127-1136.
Yeretzian C, Pascual EC, Goodman BA.  2012.  Effect of roasting conditions and grinding on free radical contents of coffee beans stored in air. Food Chemistry. 131:811-816.
Bachmair E, Bots ML, Mennen LI, Kelder T, Evelo CT, Horgan GW, Ford I, de Roos B.  2012.  Effect of supplementation with an 80:20 cis9, trans11 conjugated linoleic acid blend on the human platelet proteome. Molecular Nutrition and Food Research. 56:1148-1159.
Feliciano D.  2012.  Effectiveness indicators for forest owner's association in Portugal. Silva Lusitana. 20:55-70.
Howden AJM, Huitema E.  2012.  Effector-triggered post-translational modifications and their role in suppression of plant immunity. Frontiers in Plant Science. 3:160.
Macleod CJA, Falloon PD, Evans R, Haygarth PM.  2012.  The effects of climate change on the mobilization of diffuse substances from agricultural systems. Advances in Agronomy. 115:41-77.
Clark KE, Hartley SE, Brennan RM, Jennings SN, McMenemy LS, McNicol JW, Mitchell C, Johnson SN.  2012.  Effects of cultivar and egg density on a colonizing vine weevil (Otiorhynchus sulcatus) population and its impacts on red raspberry growth and yield. Crop Protection. 32:76-82.
Bellingham M, Fiandanese N, Byers A, Cotinot C, Evans NP, Pocar P, Amezaga MR, Lea RG, Sinclair KD, Rhind SM et al..  2012.  Effects of exposure to environmental chemicals during pregnancy on the development of the male and female reproductive axes. Reproduction in Domestic Animals. 47:15-22.
Wilson FA, Holtrop G, Calder AG, Anderson SE, Lobley GE, Rees WD.  2012.  Effects of methyl-deficient diets on methionine and homocysteine metabolism in the pregnant rat. American Journal of Physiology - Endocrinology and Metabolism. 302:E1531-E1540.
Pocar P, Fiandanese N, Secchi C, Berrini A, Fischer B, Schmidt JS, Schaedlich K, Rhind SM, Zhang Z, Borromeo V.  2012.  Effects of polychlorinated biphenyls in CD-1 mice: reproductive toxicity and intergenerational transmission. Toxicological Sciences. 126:213-226.
Picon-Cochard C, Pilon R, Tarroux E, Pages L, Robertson J, Dawson LA.  2012.  Effects of species, root branching order and season on the root traits of 13 perennial grass species. Plant and Soil. 353:47-57.
Cheke RA, McWilliam AN, Mbereki C, van der Walt E, Mtobesya B, Magoma RN, Young S, Eberly JP.  2012.  Effects of the organophosphate fenthion for control of the red-billed quelea Quelea quelea on cholinesterase and haemoglobin concentrations in the blood of target and non-target birds. Ecotoxicology. 21:1761-1770.
Edwards AC, Coull MC, Sinclair AH, Walker RL, Watson CA.  2012.  Elemental status (Cu, Mo, Co, B, S, and Zn) of Scottish agricultural soils compared with a soil-based risk assessment. Soil Use and Management. 28:167-176.
Speed JDM, Austrheim G, Hester AJ, Mysterud A.  2012.  Elevational advance of alpine plant communities is buffered by herbivory. Journal of Vegetation Science. 23:617-625.
O'Sullivan JJ, Bradford RA, Bonaiuto M, De Dominicis S, Rotko P, Aaltonen J, Waylen K, Langan SJ.  2012.  Enhancing flood resilience through improved risk communications. Natural Hazards and Earth System Sciences. 12:2271-2282.
Alcon F, Martin-Ortega J, Berbel J, de Miguel MD.  2012.  Environmental benefits of reclaimed water: an economic assessment in the context of the Water Framework Directive. Water Policy. 14:148-159.
Vergara P, Redpath SM, Martinez-Padilla, J.; Millan J, Mougeot F.  2012.  Environmental conditions influence red grouse ornamentation at a population level. Biological Journal of the Linnean Society. 107:788-798.
Raven JA, Crawfurd K.  2012.  Environmental controls on coccolithophore calcification. Marine Ecology Progress Series. 470:137-166.
Vergara P, Martinez-Padilla, J.; Millan J, Mougeot F, Leckie F, Redpath SM.  2012.  Environmental heterogeneity influences the reliability of secondary sexual traits as condition indicators. Journal of Evoluationary Biology. 25:20-28.
Yelina NE, Choi K, Chelysheva L, Macaulay M, de Snoo B, Wijnker E, Miller N, Drouaud J, Grelon M, Copenhaver GP et al..  2012.  Epigenetic remodeling of meiotic crossover frequency in arabidopsis thaliana DNA methyltransferase mutants. PLoS Genetics. 8:e1002844.
Getachew AM, Innocent G, Proudman CJ, Trawford A, Feseha G, Reid SWJ, Love S.  2012.  Equine cestodosis: a sero-epidemiological study of Anoplocephala perfoliata infection in Ethiopia. Veterinary Research Communication. 36:93-98.
Bakam I, Pajot G, Matthews RB.  2012.  Estimating carbon price from a closed emission trading scheme in the agricultural sector. Journal of Land Use Science. 6:1-18.
Shibu ME, Matthews RB, Bakam I, Moffat AJ, Baggaley NJ.  2012.  Estimating greenhouse gas abatement potential of biomass crops in Scotland under various management options. Biomass and Bioenergy. 47:211-227.
Schmidt S, Bengough AG, Gregory PJ, Grinev DV, Otten W.  2012.  Estimating root-soil contact from 3-D X-ray microtomographs. European Journal of Soil Science. 63:776-786.
Minet E, Coxon CE, Goodhue R, Richards KG, Kalin RM, Meier-Augenstein W.  2012.  Evaluating the utility of N-15 and O-18 isotope abundance analyses to identify nitrate sources: a soil zone study. Water Research. 46:3723-3736.
Schultz L, Cogan NOI, McLean K, Dale MFB, Bryan GJ, Forster JW, Slater AT.  2012.  Evaluation and implementation of a potential diagnostic molecular marker for H1-conferred potato cyst nematode resistance in potato (Solanum tuberosum L.). Plant Breeding. 131:315-321.
Ferreira LMM, Celaya R, Santos AS, Guedes CMV, Rodrigues MAM, Mayes RW, Osoro K.  2012.  Evaluation of long-chain alcohols as diet composition markers in goats grazing heathland areas. Animal. 6:683-0692.
Hockland S, Niere B, Grenier E, Blok VC, Phillips MS, Den Nijs L, Anthoine G, Pickup J, Viaene N.  2012.  An evaluation of the implications of virulence in non-European populations of Globodera pallida and G. rostochiensis for potato cultivation in Europe. Nematology. 14:1-13.
Adriaens ME, Jaillard M, Eijssen LMT, Mayer C, Evelo CTA.  2012.  An evaluation of two-channel ChIP-on-chip and DNA methylation microarray normalization strategies. BMC Genomics. 13:42-42.
Vetukuri RR, Asman AKM, Tellgren-Roth C, Jahan SN, Reimegard J, Fogelqvist J, Savenkov E, Soderbom F, Avrova AO, Whisson SC et al..  2012.  Evidence for small RNAs homologous to effector-encoding genes and transposable elements in the oomycete Phytophthora infestans. PLoS One.. 7:e51399-e51399.
Hoolahan AH, Blok VC, Gibson T, Dowton M.  2012.  Evidence of animal mtDNA recombination between divergent populations of the potato cyst nematode Globodera pallida. Genetica. 140:19-29.
Mitchell RJ, Hester AJ, Campbell CD, Chapman SJ, Cameron CM, Hewison RL, Potts JM.  2012.  Explaining the variation in the soil microbial community: do vegetation composition and soil chemistry explain the same or different parts of the microbial variation? Plant and Soil. 351:355-362.
Semashko MA, Gonzalez I, Shaw J, Leonova OG, Popenko VI, Taliansky ME, Canto T, Kalinina N.  2012.  The extreme N-terminal domain of a hordeivirus TGB1 movement protein mediates its localization to the nucleolus and interaction with fibrillarin. Biochemie. 94:1180-1188.
Devos Y, Hails RS, Messean A, Perry JN, Squire GR.  2012.  Feral genetically modified herbicide tolerant oilseed rape from seed import spills: are concerns scientifically justified? Transgenic Research. 21:1-21.
Meharg AA, Edwards KJ, Schofield JE, Raab A, Feldmann J, Moran A, Bryant CL, Thornton B, Dawson JJC.  2012.  First comprehensive peat depositional records for tin, lead and copper associated with the antiquity of Europe’s largest cassiterite deposits. Journal of Archaeological Science. 39:717-727.
Branch TA, Austin J, Acevedo-Whitehouse K, Gordon IJ, Gompper ME, Katzner TE, Pettorelli N.  2012.  Fisheries conservation and management: finding consensus in the midst of competing paradigms. Animal Conservation. 15:1-3.
Worrall F, Davies H, Burt T, Howden NJK, Whelan MJ, Bhogal A, Lilly A.  2012.  The flux of dissolved nitrogen from the UK - Evaluating the role of soils and land use. Science of the Total Environment. 434:90-100.
Worrall F, Davies H, Bhogal A, Lilly A, Evans M, Turner K, Burt T, Barraclough D, Smith P, Merrington G.  2012.  The flux of DOC from the UK - predicting the role of soils, land use and net watershed losses. Journal of Hydrology. 448-449:149-150.
Bellingham M, McKinnell C, Fowler PA, Amezaga MR, Zhang Z, Rhind SM, Cotinot C, Mandon-Pepin B, Evans NP, Sharpe RM.  2012.  Foetal and post-natal exposure of sheep to sewage sludge chemicals disrupts sperm production in adulthood in a subset of animals. International Journal of Andrology. 35:317-329.
Torronen R, McDougall GJ, Dobson G, Stewart D, Hellström J, Mattila P, Pihlava JM, Karjalainen RO.  2012.  Fortification of blackcurrant juice with crowberry: impact on polyphenol composition, urinary phenoloic metabolites, and postprandial glycemic response in healthy subjects. Journal of Functional Foods. 4:746-756.
Schoeb C, Butterfield BJ, Pugnaire FI.  2012.  Foundation species influence trait-based community assembly. New Phytologist. 196:824-834.
Sprent JI.  2012.  From pure to applied: legume research reports from down under. New Phytologist. 194:318-320.
Awofala AA, Davies JA, Jones S.  2012.  Functional roles for redox genes in ethanol sensitivity in Drosophila. Functional and Integrative Genomics. 12:305-315.
Haegeman A, Mantelin S, Jones JT, Gheysen G.  2012.  Functional roles of effectors of plant-parasitic nematodes. Gene. 492:19-31.
Evans DM, Barnard P, Koh LP, Chapman CA, Altwegg R, Garner TWJ, Gompper ME, Gordon IJ, Katzner PTEN.  2012.  Funding nature conservation: who pays? Animal Conservation. 15:215-216.
Herold MB, Baggs EM, Daniell TJ.  2012.  Fungal and bacterial denitrification are differently affected by long-term pH amendment and cultivation of arable soil. Soil Biology and Biochemistry. 54:25-35.
Getachew AM, Innocent G, Trawford AF, Reid SWJ, Love S.  2012.  Gasterophilosis: a major cause of rectal prolapse in working donkeys in Ethiopia. Tropical Animal Health and Production. 44:757-762.
Rowland LJ, Bell D, Alkharouf N, Bassil N, Drummond F, Beers L, Buck E, Finn C, Graham J, McCallum S et al..  2012.  Generating genomic tools for blueberry improvement. International Journal of Fruit Science. 12:276-287.
Looseley M, Newton AC, Atkins SD, Fitt BDL, Fraaije BA, Thomas WTB, Keith R, Macaulay M, Lynott JS, Harrap D.  2012.  Genetic basis of control of Rhynchosporium secalis infection and symptom expression in barley. Euphytica. 184:47-56.
Farre A, Cuadrado A, Lacasa-Benito I, Cistue L, Schubert I, Comadran J, Jansen J, Romagosa I.  2012.  Genetic characterization of a reciprocal translocation present in a widely grown barley variety. Molecular Breeding. 30:1109-1119.
McNally RR, Toth IK, Cock PJA, Pritchard L, Hedley PE, Morris JA, Zhao YF, Sundin GW.  2012.  Genetic characterization of the HrpL regulon of the fire blight pathogen Erwinia amylovora reveals novel virulence factors. Molecular Plant Pathology. 13:160-173.
Jing R, Ambrose MA, Knox MR, Smykal P, Hybl M, Ramos A, Caminero C, Burstin J, Duc G, van Soest LJM et al..  2012.  Genetic diversity in European Pisum germplasm collections. Theoretical and Applied Genetics. 125:367-380.
Pelser PB, Abbott RJ, Comes HP, Milton JJ, Moller M, Looseley ME, Cron GV, Barcelona JF, Kennedy AH, Watson LE et al..  2012.  The genetic ghost of an invasion past: colonization and extinction revealed by historical hybridisation in Senecio. Molecular Ecology. 21:369-387.
Tomaszewski C, Byrne S, Foito A, Kildea S, Kopecky D, Dolezel J, Heslop-Harrison JS, Stewart D, Barth S.  2012.  Genetic linkage mapping in an F2 perennial ryegrass population saturated with DArT markers. Plant Breeding. 131:345-349.
Begg GS, Wishart J, Young MW, Squire GR, Iannetta PPM.  2012.  Genetic structure among arable populations of Capsella bursa-pastoris L. is linked to functional traits and in-field conditions. Ecography. 35:446-457.
Cooke DEL, Cano LM, Raffaele S, Bain RA, Cooke LR, Etherington GJ, Deahl KL, Farrer RA, Gilroy EM, Goss EM et al..  2012.  Genome analyses of an aggressive and invasive lineage of the Irish potato famine pathogen. PLoS Pathogens. 8:e1002940.
Lamour KH, Mudge J, Gobena D, Hurtado-Gonzales OP, Schmutz J, Kuo A, Miller NA, Rice BJ, Raffaele S, Cano LM et al..  2012.  Genome sequencing and mapping reveal loss of heterozygosity as a mechanism for rapid adaptation in the vegetable pathogen phytophthora capsici. Molecular Plant-Microbe Interactions. 25:1350-1360.
Rio-Alvarez I, Rodriguez-Herva JJ, Cuartas-Lanza R, Toth IK, Pritchard L, Rodriguez-Palenzuela P, Lopez-Solanilla E.  2012.  Genome-wide analysis of the response of Dickeya dadantii 3937 to plant antimicrobial peptides. Molecular Plant-Microbe Interactions. 25:523-533.
Wang M, Jiang N, Jia T, Leach L, Cockram J, Waugh R, Ramsay L, Thomas WTB, Luo Z.  2012.  Genome-wide association mapping of agronomic and morphologic traits in highly structured populations of barley cultivars. Theoretical and Applied Genetics. 124:233-246.
Wang DP, Qi MS, Calla B, Korban SS, Clough SJ, Cock PJA, Sundin GW, Toth IK, Zhao YF.  2012.  Genome-wide identification of genes regulated by the Rcs phosphorelay system in Erwinia amylovora. Molecular Plant-Microbe Interactions. 25:6-17.
Limpens J, Granath G, Aerts R, Heijmans MMPD, Sheppard LJ, Bragazza L, Williams BL, Rydin H, Bubier J, Moore T et al..  2012.  Glasshouse vs field experiments: do they yield ecologically similar results for assessing N impacts on peat mosses? New Phytologist. 195:408-418.
Bjorgsen Gurung A, Wymann von Dach S, Price MF, Aspinall R, Balsiger J, Baron JS, Sharma E, Greenwood G, Kohler T.  2012.  Global change and the world's mountains: research needs and emerging themes for sustainable development. A synthesis from the 2010 Perth II conference. Mountain Research and Development. 32:S47-S54.
Armitage HF, Britton AJ, van der Wal R, Woodin SJ.  2012.  Grazing exclusion and phosphorus addition as potential local management options for the restoration of alpine moss-sedge heath. Biological Conservation. 153:17-24.
Littlewood NA, Pakeman RJ, Pozsgai G.  2012.  Grazing impacts on Auchenorrhyncha diversity and abundance on a Scottish upland estate. Insect Conservation and Diversity. 5:67-74.
Theobold CM, Chatterjee A, Horgan GW.  2012.  A hierarchical Bayesian mixture model for repeated dietary records. Food and Chemical Toxicology. 50:320-327.
Aderhold A, Husmeier D, Lennon JJ, Beale CM, Smith VA.  2012.  Hierarchical Bayesian models in ecology: Reconstructing species interaction networks from non-homogeneous species abundance data. Ecological Informatics. 11:55-64.
Benavides J, Katzer F, Maley SW, Bartley PM, Canton G, Palarea-Albaladejo J, Purslow CA, Pang Y, Rocchi MS, Chianini F et al..  2012.  High rate of transplacental infection and transmission of Neospora caninum following experimental challenge of cattle at day 210 of gestation. Veterinary Research. 43:83.
Birkel C, Soulsby C, Tetzlaff D, Dunn SM, Spezia L.  2012.  High-frequency storm event isotope sampling reveals time-variant transit time distributions and influence of diurnal cycles. Hydrological Processes. 26:308-316.
Streitner C, Köster T, Simpson CG, Shaw P, Danisman S, Brown JWS, Staiger D.  2012.  An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana. Nucleic Acids Research. 40:11240-11255.
Russell GC, Benavides J, Grant DM, Todd H, Thomson J, Puri V, Nath M, Haig DM.  2012.  Host gene expression changes in cattle infected with Alcelaphine herpesvirus 1. Virus Research. 169:246-254.
Saunders DGO, Breen S, Win J, Schornack S, Hein I, Bozkurt TO, Champouret N, Vleeshouwers GAA, Birch PRJ, Gilroy EM et al..  2012.  Host protein BSL1 associates with phytophthora infestans RXLR effector AVR2 and the solanum demissum immune receptor R2 to mediate disease resistance. The Plant Cell. 24:3420-3434.
Wawra S, Bain J, Durward E, de Bruijn I, Minor KL, Matena A, Lobach L, Whisson SC, Bayer P, Porter AJ et al..  2012.  Host-targeting protein 1 (SpHtp1) from the oomycete Saprolegnia parasitica translocates specifically into fish cells in a tyrosine-O-sulphate-dependent manner. Proceedings of the National Academy of Sciences. 109:2096-2101.
Clark EL, Daniell TJ, Wishart J, Hubbard SF, Karley AJ.  2012.  How conserved are the bacterial communities associated with aphids? A detailed assessment of the cabbage aphid (Brevicoryne brassicae) using 16S rDNA Environmental Entomology. 41:1386-1397.
Jones HG.  2012.  How do rootstocks control shoot water relations? New Phytologist. 194:301-303.
Rezanezhad F, Andersen R, Pouliot R, Price JS, Rochefort L, Graf MD.  2012.  How fen vegetation structure affects the transport of oil sands process-affected waters. Wetlands. 32:557-570.
Brooks JS, Waylen KA, Borgerhoff Mulder M.  2012.  How national context, project design, and local community characteristics influence success in community-based conservation projects. Proceedings of the National Academy of Sciences (PNAS). 109:2165-21270.
Buckland ST, Baillie SR, Dick JM, Elston DA, Magurran AE, Scott EM, Smith RI, Somerfield PJ, Studeny AC, Watt A.  2012.  How should regional biodiversity be monitored? Environmental and Ecological Statistics. 19:601-626.
Sausse C, Colbach N, Young MW, Squire GR.  2012.  How to manage the impact of gene flow on oilseed rape grain quality? Simulation case studies of three contrasted landscapes European Journal of Agronomy. 38:32-42.
van Dijk JP, Cankar K, Hendriksen PJM, Beenen HGJ, Zhu M, Scheffer S, Shepherd LVT, Stewart D, Davies HV, Leifert C et al..  2012.  The identification and interpretation of differences in the transcriptomes of organically and conventionally grown potato tubers. Journal of Agricultural and Food Chemistry. 60:2090-2101.
Jupe F, Pritchard L, Etherington G, MacKenzie K, Cock PJA, Wright F, Sharma SK, Bolser D, Bryan GJ, Jones J et al..  2012.  Identification and localisation of the NB-LRR gene family within the potato genome. BMC Genomics. 13:1-14.
Pathak AK, Pelensky C, Boag B, Cattadori IM.  2012.  Immuno-epidemiology of chronic bacteria-helminth co-infections: observations from the field and evidence from the laboratory. International Journal of Parasitology. 42:647-655.
Fowler PA, Bellingham M, Sinclair KD, Evans NP, Pocar P, Fischer B, Schaedlich K, Schmidt JS, Amazegal MR, Bhattacharya S et al..  2012.  Impact of endocrine-disrupting compounds (EDCs) on female reproductive health. Molecular and Cellular Endocrinology. 355:231-239.
Hardstaff JL, Bulling MT, Marion G, Hutchings MR, White PCL.  2012.  Impact of external sources of infection on the dynamics of bovine tuberculosis in modelled badger populations. BMC Veterinary Research. 8:92.
McLaggan D, Amezaga MR, Petra E, Frost A, Duff EI, Rhind SM, Fowler PA, Glover LA, Lagido C.  2012.  Impact of sublethal levels of environmental pollutants found in sewage sludge on a novel Caenorhabditis elegans model biosensor. PLoS ONE. 7:e46503.
Cooksley SL, Brewer MJ, Donnelly D, Spezia L, Tree A.  2012.  Impacts of artificial structures on the freshwater pearl mussel Margaritifera margaritifera in the River Dee, Scotland. Aquatic Conservation: Marine and Freshwater Ecosystems. 22:318-330.
Phoenix GK, Emmett BBAAJ, Caporn SJM, Dise NB, Helliwell RC, Jones L, Leake JR, Leith ID, Sheppard LJ, Sowerby A et al..  2012.  Impacts of atmospheric nitrogen deposition: responses of multiple plant and soil parameters across contrasting ecosystems in long-term field experiments. Global Change Biology. 18:1197-1215.
Purse BV, Falconer D, Sullivan MJ, Carpenter S, Mellor PS, Piertney SB, Mordue AJ, Albon SD, Gunn GJ, Blackwell A.  2012.  Impacts of climate, host and landscape factors on Culicoides species in Scotland. Medical and Veterinary Entomology. 26:168-177.
Addy S, Cooksley SL, Sime I.  2012.  Impacts of flow regulation on freshwater pearl mussel (Margaritifera margaritifera) habitat in a Scottish montane river. Science of the Total Environment. 432:318-328.
O'Gorman EJ, Pichler DE, Adams G, Benstead JP, Cohen H, Craig N, Cross WF, Demars BOL, Friberg N, Gisalon GM et al..  2012.  Impacts of warming on the structure and functioning of aquatic communities: individual- to ecosystem-level responses. Chapter 2. Advances in Ecological Research. 47:81-176.
Daniell TJ, Davidson J, Alexander CJ, Caul S, Roberts D.  2012.  Improved real-time PCR estimation of gene copy number in soil extracts using an artificial reference. Journal of Microbiological Methods. 91:38-44.
Love AJ, Chapman SN, Matic S, Noris E, Lomonossoff GP, Taliansky ME.  2012.  In planta production of a candidate vaccine against bovine papillomavirus type 1. Planta. 236:1305-1313.
Zakri AM, Ziegler A, Commandeur U, Fischer R, Torrance L.  2012.  In vivo expression and binding activity of scFv-RWAV, which recognises the coat protein of tomato leaf curl New Delhi virus (family Geminivirdae). Archives of Virology. 157:1291-1299.
Vanga BR, Butler RC, Toth IK, Ronson CW, Pitman AR.  2012.  Inactivation of PbTopo III beta causes hyper-excision of the Pathogenicity Island HAI2 resulting in reduced virulence of Pectobacterium atrosepticum. Molecular Microbiology. 84:648-663.
Beale CM, Lennon JJ.  2012.  Incorporating uncertainty in predictive species distribution modelling. Philosophical Transactions of the Royal Society B. 367:247-258.
Huaiying Y, Thornton B, Paterson E.  2012.  Incorporation of 13C-labelled rice rhizodeposition carbon into soil microbial communities under different water status. Soil Biology and Biochemistry. 53:72-77.
Zakhrabekova S, Gough SP, Braumann I, Muller AH, Lundqvist J, Ahmann K, Dockter C, Matyszczak I, Kurowska M, Druka A et al..  2012.  Induced mutations in circadian clock regulator Mat-a facilitated short-season adaptation and range extension in cultivated barley. Proceedings of the National Academy of Sciences, USA. 109:4326-4331.
Dove H, Milne JA, Lamb CS, Sibbald AM, McCormack HA.  2012.  The influence of herbage mass and supplementary feeding on nutrient flows and animal performance in grazing, lactating ewes. Journal of Agricultural Science. 150:644-662.
Poggio L, Soille P.  2012.  Influence of pit removal methods on river network position. Hydrological Processes. 26:1984-1990.
Swanston JS, Middlefell-Williams J.  2012.  The influence of steep regime and germination period on the malting properties of some hull-less barley lines. Journal of the Institute of Brewing. 118:186-191.
Craig T, Conniff A, Galan-Diaz C.  2012.  The influences of actual and perceived familiarity on environmental preferences for the design of a proposed urban square. Urban Studies Research, Article id 767048, 9pp..
Okello EJ, Leylabi R, McDougall GJ.  2012.  Inhibition of acetylcholinesterase by green and white tea and their simulated intestinal metabolites. Food and Function. 3:651-661.
Leonardi G, Vahter M, Clemens F, Goessler W, Gurzau E, Hemminiki K, Hough RL, Koppova K, Kumar R, Rudnai P et al..  2012.  Inorganic arsenic and basal cell carcinoma in areas of Hungary, Romania, and Slovakia: A case-control study. Environmental Health Perspectives. 120:721-726.
Federici F, Dupuy L, Laplaze L, Heisler M, Haseloff J.  2012.  Integrated genetic and computation methods for in planta cytometry. Nature Methods. 9:483-485.
Balana BB, Lago M, Baggaley N, Castellazzi M, Sample J, Stutter M, Slee B, Vinten AJA.  2012.  Integrating economic and biophysical data in assessing cost-effectiveness of buffer strip placement. Journal of Environmental Quality. 41:380-388.
Rungapamestry V, McMonagle J, Reynolds C, Rucklidge G, Reid M, Duncan G, Ross K, Horgan GW, Toomey S, Moloney AP et al..  2012.  Inter-organ proteomic analysis reveals insights into the molecular mechanisms underlying the anti-diabetic effects of cis-9, trans-11-conjugated linoleic acid in ob/ob mice. Journal of Fruit Science. 12:461-476.
Waylen KA, Fischer A, McGowan PJK, Milner-Gulland EJ.  2012.  Interactions between a collectivist culture and Buddhist teachings influence environmental concerns and behaviors, in the Republic of Kalmykia, Russia. Society and Natural Resources. 25:1118-1133.
Stott AW, Ahmadi BV, Dwyer CM, Kupiec B, Morgan-Davies C, Milne CE, Ringrose S, Goddard P, Phillips K, Waterhouse A.  2012.  Interactions between profit and welfare on extensive sheep farms. Animal Welfare. 21:57-64.
Clark KE, Hartley SE, Brennan RM, MacKenzie K, Johnson SN.  2012.  Investigating preference-performance relationships in aboveground-belowground life cycles: a laboratory and field study with the vine weevil (Otiorhynchus sulcatus). Bulletin of Entomological Research. 102:63-70.
Stockan JA, Langan SJ, Young MR.  2012.  Investigating riparian margins for vegetation patterns and plant-environment relationships in northeast Scotland. Journal of Environmental Quality. 41:364-372.
Oduse KA, Cullen DW.  2012.  An investigation into the fruit firmness properties of some progeny and cultivars of red raspberry (Rubus idaeus). IOSR Journal of Environmental Science, Toxicology and Food Technology. 1:4-12.
Lapierre H, Holtrop G, Calder AG, Renaud J, Lobley GE.  2012.  Is D-methionine bioavailable to the dairy cow? Journal of Dairy Science. 95:353-362.
Dyer GA, Matthews RB, Meyfroidt P.  2012.  Is there an ideal REDD+ program? An analysis of policy trade-offs at the local level PLoS ONE. 7:e52478.
Bradshaw JE, Wilson RN.  2012.  Kale population improvement and cultivar production. Euphytica. 184:275-288.
Campbell CD, Lilly A, Towers W, Chapman SJ, Werritty A, Hanley N.  2012.  Land use and a low-carbon society. Earth and Environmental Science Transactions of the Royal Society of Edinburgh, 103, 165-173..
Perez-Espona S, McLeod JE, Franks NR.  2012.  Landscape genetics of a top neotropical predator. Molecular Ecology. 21:5969-5985.
Dinnie E, Blackstock KL, Dilley R.  2012.  Landscapes of challenge and change: contested views of the Cairngorms National Park. Landscape Research. 37:451-466.
Rhee YJ, Hillier S, Gadd GM.  2012.  Lead transformation to pyromorphite by fungi. Current Biology. 22:237-241.
Demars BOL, Kemp JL, Friberg N, Usseglio-Polatera P, Harper DM.  2012.  Linking biotopes to invertebrates in rivers: biological traits, taxonomic composition and diversity. Ecological Indicators. 23:301-311.
Blackstock KL, Waylen KA, Dunglinson J, Marshall KM.  2012.  Linking process to outcomes - internal and external criteria for a stakeholder involvement in River Basin Management Planning. Ecological Economics. 77:113-122.
Dobson G, Shrestha M, Hilz H, Karjalainen RO, McDougall GJ, Stewart D.  2012.  Lipophilic components in black currant seed and pomace extracts. European Journal of Lipid Science and Technology. 114:575-582.
Brooker RW, Matesanz S, Valladares F, Klotz S.  2012.  Long-term spatial pattern change in a semi-arid plant community: The role of climate and composition. Acta Oecologia. 45:8-15.
Hossain MS, Liao JQ, James EK, Sato S, Tabata S, Jurkiewicz A, Madsen LH, Stougaard J, Ross L, Szczyglowski K.  2012.  Lotus japonicus ARPC1 is required for rhizobial infection. Plant Physiology. 160:917-928.
Demars BOL, Kemp JL, Friberg N, Usseglio-Polatera P, Harper DM.  2012.  Macroinvertebrate abundance and proportion of trait categories in river biotopes across England and Wales. PANGEAE database Supplement to: Demars, B.O.L.; Kemp, J.L.; Friberg, N.; Usseglio-Polatera, P.; Harper, D.M. (2012): Linking biotopes to invertebrates in rivers: biological traits, taxonomic composition and diversity. Ecological Indicators.. 23:301-311.
Gilbert L, Williamson KA, Graves JA.  2012.  Male attractiveness regulates daughter fecundity non-genetically via maternal investment. Proceedings of the Royal Society of London, B.. 279:523-528.
Mann AN, O'Reilly-Wapstra JM, Iason GR, Sanson G, Davies NW, Tilyard P, Williams D, Potts BM.  2012.  Mammalian herbivores reveal marked genetic divergence between populations of an endangered plant species. Oikos. 121:268-276.
van der Zee R, Pisa L, Andonov S, Brodschneider R, Charriere JD, Chlebo R, Coffey MF, Crailsheim K, Dahle B, Gajde A et al..  2012.  Managed honey bee colony losses in Canada, China, Europe, Israel and Turkey, for the winters of 2008-9 and 2009-10. Journal of Agricultural Research. 51:91-114.
White PJ, Broadley MR, Gregory PJ.  2012.  Managing the nutrition of plants and people. Applied and Environmental Soil Science, 2012, Article id 104826, 13pp..
Carpenter D, Sherlock E, Jones DT, Chiminoides J, Writer T, Neilson R, Boag B, Keith AM, Eggleton P.  2012.  Mapping of earthworm distribution for the British Isles and Eire highlights the under-recording of an ecologically important group. Biodiversity and Conservation. 21:475-485.
Cortada L, Mantelin S, Verdejo-Lucas S, Kaloshian I.  2012.  Marker analysis for detection of the Mi-1.2 resistance gene in tomato hybrid rootstocks and cultivars. Nematology. 14:631-642.
Bartley PM, Wright SE, Maley SW, Macaldowie CN, Nath M, Hamilton CM, Katzer F, Buxton D, Innes EA.  2012.  Maternal and foetal immune responses of cattle following an experimental challenge with Neospora caninum at day 70 of gestation. Veterinary Research. 43:38.
Deng W, Jeng DS, Toorop PE, Squire GR, Iannetta PPM.  2012.  A mathematical model of mucilage expansion in myxospermous seeds of Capsella bursa-pastoris L. Medic (shepherd's purse). Annals of Botany. 109:419-427.
Brown EM, Gill CIR, McDougall GJ, Stewart D.  2012.  Mechanisms underlying the anti-proliferative effects of berry components in in vitro models of colon cancer. Current Pharmaceutical Biotechnology. 13:200-209.
Stephenson T, Reid E, Avery LM, Jefferson B.  2012.  Media surface properties and the development of nitrifying biofilms in mixed cultures for wastewater treatment. Process Safety and Environmental Protection. Published online. 91:321-324.
Frank T, Rohlig RM, Davies HV, Barros E, Engel K.  2012.  Metabolite profiling of maize kernels - genetic modification versus environmental influence. Journal of Agricultural and Food Chemistry. 60:3005-3012.
Gontikaki E, Polymenakou PN, Thornton B, Narayanaswamy BE, Black K, Tselepides A, Witte U.  2012.  Microbial response to organic matter enrichment in the oligotrophic Levantine Basin (Eastern Mediterranean). Geomicrobiology Journal. 29:648-655.
Pariser EC, Gilbert L, Hazon N, Arnold KE, Graves JA.  2012.  Mind the gap: the ration of yolk androgens and antioxidants varies between sons and daughters dependent on paternal attractiveness. Behavioral Ecology and Sociobiology. 66:519-527.
Iavazzo P, Adamo P, Boni M, Hillier S, Zampella M.  2012.  Mineralogy and chemical forms of lead and zinc in abandoned mine wastes and soils: an example from Morocco. Journal of Geochemical Exploration. 113:56-67.
Tilsner J, Oparka KJ.  2012.  Missing links? The connection between replication and movement of plant RNA viruses Current Opinion in Virology. 2:705-711.
Bagavathiannan MV, Begg GS, Gulden RH, Van Acker RC.  2012.  Modelling the dynamics of feral alfalfa populations and its management implications. PLoS One. 7:e39440.
Tyson T, O'Mahony ZG, Skelton M, Daly MB, Jones JT, Elsworth B, Phillips M, Blaxter M, Burnell AM.  2012.  A molecular analysis of desiccation tolerance mechanisms in the anhydrobiotic nematode Panagrolaimus superbus using expressed sequenced tags. BMC Research Notes. 5:e68.
Grundy KC, Woodward S, Genney DR, Taylor AFS.  2012.  A molecular approach to explore the extent of the threatened fungus Hypocreopsis rhododendri within wood. Fungal Biology. 116:354-362.
Owen G, Perks M, Benskin C, Wilkinson ME, Jonczyk J, Quinn PF.  2012.  Monitoring agricultural diffuse pollution through a dense monitoring network in the River Eden Demonstration Test Catchment, Cumbria, UK. Area. 44:443-453.
Ward Thompson C, Roe J, Aspinall P, Mitchell R, Clow A, Miller DR.  2012.  More green space is linked to less stress in deprived communities: evidence from salivary cortisol patterns. Landscape and Urban Planning. 105:221-229.
Semashko MA, Rakitina DV, Gonzalez I, Canto T, Kalinina N, Taliansky ME.  2012.  Movement protein of hordeivirus interacts in vitro and in vivo with coilin, a major structural protein of Cajal bodies. Doklady Biochemistry and Biophysics. 442:57-60.
Sugden D, Werritty A, Webb J, Caldwell E, Campbell CD, Dlugolecki A, Hanley N, Kerr A.  2012.  Multi-level governance: opportunities and barriers in moving to a low-carbon Scotland. Earth and Environmental Science, Transactions of the Royal Society of Edinburgh. 103:175-186.
Elliott GN, Thomas N, MacRae M, Campbell CD, Ogden ID, Singh BK.  2012.  Multiplex T-RFLP allows for increased target number and specificity: Detection of Salmonella enterica and six species of Listeria in a single test. PLoS One. 7:e43672.
Jones MA, Williams BA, McNicol JW, Simpson CG, Brown JWS, Harmer SL.  2012.  Mutation of Arabidopsis spliceosomal timekeeper locus 1 causes circadian clock defects. The Plant Cell. 24:4066-4082.
Comadran J, Kilian B, Russell JR, Ramsay L, Stein N, Ganal M, Shaw P, Bayer M, Thomas WTB, Marshall DF et al..  2012.  Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley. Nature Genetics. 44:1388-1392.
White PJ, Veneklaas EJ.  2012.  Nature and nurture: The importance of seed phosphorus content. Plant and Soil. 357:1-8.
Tavares LR, Figueira I, Macedo D, McDougall GJ, Leitao MC, Vieira HLA, Stewart D, Alves PM, Ferreira RB, Santos CN.  2012.  Neuroprotective effect of blackberry (Rubus sp.) polyphenols is potentiated after simulated gastronintestinal digestion. Food Chemistry. 131:1443-1452.
Tavares LR, McDougall GJ, Fortalezas S, Stewart D, Ferreira RB, Santos CN.  2012.  The neuroprotective potential of phenolic-enriched fractions from four juniperus species found in Portugal. Food Chemistry. 135:562-570.
Birkel C, Paroli R, Spezia L, Dunn SM, Tetzlaff D, Soulsby C.  2012.  A new approach to simulating stream isotope dynamics using Markov switching autoregressive models. Advances in Water Resources. 46:20-30.
Dietrich RC, Bengough AG, Jones HG, White PJ.  2012.  A new physical interpretation of plant root capacitance. Journal of Experimental Botany. 63:6149-6159.
Zhang H, Liu YX, Xu Y, Chapman SN, Love AJ, Xia T.  2012.  A newly isolated Na+/H+ antiporter gene, DmNHX1, confers salt tolerance when expressed transiently in Nicotiana benthamiana or stably in Arabidopsis thaliana. Plant Cell Tissue and Organ Culture. 110:189-200.
Armitage HF, Britton AJ, van der Wal R, Pearce S, Thompson DBA, Woodin SJ.  2012.  Nitrogen deposition enhances moss growth but leads to an overall decline in habitat condition in mountain moss-sedge heath. Global Change Biology. 18:290-300.
Ampomah OY, James EK, Iannetta PPM, Kenicer G, Sprent JI, Huss-Danell K.  2012.  Nodulation and ecological significance of indigenous legumes in Scotland and Sweden. Symbiosis. 57:133-48.
Fonseca MB, Peix A, de Faria SM, Mateos PF, Rivera LP, Simoes-Araujo JL, Franca MGC, dos Santos Isias RM, Cruz C, Velazquez E et al..  2012.  Nodulation in Dimorphandra wilsonii Rizz. (Caesalpinioideae), a threatened species native to the Brazilian Cerrado. PLoS ONE. 7:e49520.
Gehlot HS, Panwar D, Tak N, Shekhawat NS, Kumar M, Tiwari R, Ardley J, James EK, Sprent JI.  2012.  Nodulation of legumes from the Thar desert of India and molecular characterization of their rhizobia. Plant and Soil. 357:227-243.
Grzegorczyk M, Husmeier D.  2012.  A non-homogeneous dynamic bayesian network with sequentially coupled interaction parameters for applications in systems and synthetic biology. Statistical Applications in Genetics and Molecular Biology. 11
Old GH, Naden PS, Granger SJ, Bilotta GS, Brazier RE, Macleod CJA, Krueger T, Bol R, Hawkins JMB, Haygarth P et al..  2012.  A novel application of natural fluorescence to understand the sources and transport pathways of pollutants from livestock farming in small headwater catchments. Science of the Total Environment. 417:169-182.
Swanson MM, Reavy B, Makarova KS, Cock PJ, Hopkins DW, Torrance L, Koonin EV, Taliansky M.  2012.  Novel bacteriophages containing a genome of another bacteriophage within their genomes. PLoS ONE. 7:e40683.
Donn S, Neilson R, Griffiths BS, Daniell TJ.  2012.  A novel molecular approach for rapid assessment of soil nematode assemblages û variation, validation and potential applications. Methods in Ecology and Evolution. 3:12-23.
van der Linde S, Holden E, Parkin PI, Alexander IJ, Anderson IC.  2012.  Now you see it, now you don't: The challenge of detecting, monitoring and conserving ectomycorrhizal fungi. Fungal Ecology. 5:633-640.
Shaw P, Brown JWS.  2012.  Nucleoli: Composition, function and dynamics (Review). Plant Physiology. 158:44-51.
Withers PJA, May L, Jarvies HP, Jordan P, Doody D, Foy RH, Bechmann M, Cooksley SL, Dils R, Deal N.  2012.  Nutrient emissions to water from septic tank systems in rural catchments: uncertainties and implications for policy. Environmental Science and Policy.. 24:71-82.
Potts T, O'Higgins T, Hastings E.  2012.  Oceans of opportunity or stormy seas? What does the future hold for developments in European marine policy Philosophical Transactions of the Royal Society of London, A.. 370:5682-5700.
Sutherland LA, Darnhofer I.  2012.  Of organic farmers and "good farmers": changing habitus in rural England. Journal of Rural Studies. 28:232-240.
Lowassa A, Tadie D, Fischer A.  2012.  On the role of women in bushmeat hunting - insights from Tanzania and Ethiopia. Journal of Rural Studies. 28:622-630.
Thonur L, Maley M, Gilray J, Crook T, Laming E, Turnbull D, Nath M, Willoughby K.  2012.  One-step multiplex real time RT-PCR for the detection of bovine respiratory syncytial virus, bovine herpesvirus 1 and bovine parainfluenza virus 3. BMC Veterinary Research. 8:37-37.
Lamour KH, Stam R, Jupe J, Huitema E.  2012.  The oomycete broad-host-range pathogen Phytophthora capsici. Molecular Plant Pathology. 13:329-337.
Veneklaas EJ, Lambers H, Bragg J, Finnegan PM, Lovelock CE, Plaxton WC, Price C, Scheible W, Shane MW, White PJ et al..  2012.  Opportunities for improving phosphorus-use efficiency in crop plants. New Phytologist. 195:306-320.
Dobson P, Graham J, Stewart D, Brennan RM, Hackett CA, McDougall GJ.  2012.  Over-seasons analysis of quantitative trait loci affecting phenolic content and antioxidant capacity in raspberry. Journal of Agricultural and Food Chemistry. 60:5360-5366.
Mitchell RJ, Keith AM, Potts JM, Ross J, Reid E, Dawson LA.  2012.  Overstory and understory vegetation interact to alter soil community composition and activity. Plant and Soil. 352:65-84.

Printed from /publications/publications-list?page=16 on 23/03/23 11:41:27 PM

The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.