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K
Kloch A, Wenzel MA, Laetsch DR, Michalski O, Welc-Faleciak R, Piertney SB.  2018.  Signatures of balancing selection in toll-like receptor (TLRs) genes novel insights from a free-living rodent. Scientific Reports. 8:ArticleNo.8361.
Kleyer M, Dray S, de Bello F, Leps J, Pakeman RJ, Strauss B, Thuiller W, Lavorel S.  2012.  Assessing species and community functional responses to environmental gradients: which multivariate methods? Journal of Vegetation Science. 23:805-821.
Kleeberg R, Monecke T, Hillier S.  2008.  Preferred orientation of mineral grains in sample mounts for quantitative XRD measurements: How random are powder samples? Clays and Clay Minerals. 56(4):404-415.
Kirk EA, Reeves AD, Blackstock KL.  2007.  Understanding environmental regulation: disciplinary interactions and path dependency. Environment and Planning C. 25:250-268.
King J, Armstead I, Harper J, Ramsey L, Snape J, Waugh R, James C, Thomas A, Gasior D, Kelly R et al..  2013.  Exploitation of interspecific diversity for monocot crop improvement. Heredity. 110:475-483.
King SRF, McLellan H, Boevink PC, Armstrong MR, Bukharova T, Sukarta O, Win J, Kamoun S, Birch PRJ, Banfielda MJ.  2014.  Phytophthora infestans RXLR Effector PexRD2 interacts with Host MAPKKK epsilon to suppress plant immune signaling. The Plant Cell. 26:1345-1359.
Kindred DR, Verhoeven TMO, Weightman RM, Swanston JS, Agu RC, Brosnan JM, Sylvester-Bradley R.  2008.  Effects of variety and fertiliser nitrogen on alcohol yield, grain yield, starch and protein content, and protein composition of winter wheat. Journal of Cereal Science. 48:46-57. Abstract
Kim S-H, Ryabov EV, Kalinina N, Rakitina DV, Gillespie T, MacFarlane SA, Haupt S, Brown JWS, Taliansky ME.  2007.  Cajal bodies and the nucleolus are required for a plant virus systemic infection. EMBO Journal. 26:2169-2179. Abstract
Kim HW, Kim JB, Chu SM, Kim SY, Kim SN, Cho YS, Cho SM, Baek HJ, Park HJ, Lee DJ et al..  2010.  Analysis of anthocyanin composition and content contained from grains of the Korean purple rice varieties by liquid chromatography with diode array detection and electrospray ionization/mass spectrometry (LC-DAD-ESI/MS). Korean Journal of International Agriculture. 22:267-272.
Kim M, Brodersen KE, Szabo M, Larkum AWD, Raven JA, Ralph PJ, Pernice M.  2018.  Low oxygen affects photophysiology and the level of expression of two-carbon metabolism genes in the seagrass Zostera muelleri. Photosynthesis Research. 136:147-160.
Kim S-H, Koroleva OA, Lewandowska D, Pendle AF, Clark GP, Simpson CG, Shaw PJ, Brown JWS.  2009.  Aberrant mRNA transcripts and the nonsense-mediated decay proteins UPF2 and UPF3 are enriched in the Arabidopsis nucleolus. Plant Cell. 21:2045-2057.
Kim M, Pernice M, Watson-Lazowski A, Guagliardo P, Kilburn MR, Larkum AWD, Raven JA, Ralph PJ.  2019.  Effect of reduced irradiance on C-13 uptake, gene expression and protein activity of the seagrass Zostera muelleri. Marine Environmental Research. 149:80-89.
Kim S-H, Spensley M, Choi SK, Calixto CPG, Pendle AF, Koroleva O, Shaw PJ, Brown JWS.  2010.  Plant U13 orthologues and orphan snoRNAs identified by RNomics of RNA from Arabidopsis nucleoli. Nucleic Acids Research. 38:3054-3067.
Kim S-H, MacFarlane SA, Kalinina NO, Rakitina DV, Ryabov E, Gillespie T, Haupt S, Brown JWS, Taliansky ME.  2007.  Interaction of a plant virus-encoded protein with the major nucleolar protein fibrillarin is required for systemic virus infection. Proceedings of the National Academy of Sciences, USA. 104:11115-11120.
Kilminster KL, Walker DI, Thompson PA, Raven JA.  2006.  Limited nutritional benefit to the seagrass Halophila ovalis, in culture, following sediment organic matter enrichment. Estuarine Coastal and Shelf Science. 68:675-685. Abstract
Kilminster KL, Walker DI, Thompson PA, Raven JA.  2008.  Changes in growth, internode distance and nutrient concentrations of the seagrass Halophila ovalis with exposure to sediment sulphide. Marine Ecology-Progress Series. 361:83-91. Abstract
Kildea S, Quinn L, Mehenni-Ciz J, Cooke DEL, Perez FM, Deahl KL, Griffin D, Cooke LR.  2013.  Re-emergence of the Ib mitochondrial haplotype within the British and Irish Phytophthora infestans populations. European Journal of Plant Pathology. 135:237-242.
Kikvidze Z, Suzuki M, Brooker R.  2011.  Conceptualising importance - response to Freckleton and Rees. Trends in Ecology and Evolution. 26:499-500.
Kikvidze Z, Suzuki M, Brooker R.  2011.  Importance versus intensity: the context matters. Trends in Ecology and Evolution. 26:383-398.
Kikvidze Z, Brooker RW, Butterfield BJ, Callaway RM, Cavieres LA, Cook BJ, Lortie CJ, Michalet R, Pugnaire FI, Xiao S et al..  2015.  The effects of foundation species on community assembly: a global study on alpine cushion plant communities. Ecology. 96:2064-2069.
Kikvidze Z, Michalet R, Brooker RW, Cavieres LA, Lortie CJ, Pugnaire FI, Callaway RM.  2011.  Climatic drivers of plant-plant interactions and diversity in alpine communities. Alpine Botany. 121:63-70.
Kikvidze Z, Brooker RW.  2019.  Quantifying plant interactions: independent reference is critical for standardising the importance indices. Journal of Vegetation Science. 30:397-401.
Kikvidze Z, Brooker RW.  2010.  Towards a more exact definition of the importance of competition - a reply to Freckleton et al. (2009). Journal of Ecology. 98(4):719-724.
Kikuchi T, Shibuya H, Jones JT.  2005.  Molecular and biochemical characterization of an endo-. Biochemical Journal. 389:117-125. Abstract
Kikuchi T, Cock PJA, Helder J, Jones JT.  2014.  Characterisation of the transcriptome of Aphelenchoides besseyi and identification of a GHF 45 cellulase. Nematology. 16:99-107.
Kikuchi T, Aikawa T, Kosaka H, Pritchard L, Ogura N, Jones JT.  2007.  Expressed sequence tag (EST) analysis of the pine wood nematode Bursaphelenchus xylophilus and B. mucronatus. Molecular and Biochemical Parasitology. 155:9-17. Abstract
Kikuchi T, Shibuya H, Aikawa T, Jones JT.  2006.  Cloning and characterization of pectate lyases expressed in the esophageal gland of the pine wood nematode Bursaphelenchus xylophilus. Molecular Plant-Microbe Interactions. 19:280-287. Abstract
Kikuchi T, Eves-van den Akker S, Jones JT.  2017.  Genome evolution of plant-parasitic nematodes. Annual Review of Phytopathology. 55:333-354.
Kikuchi T, Cotton JA, Dalzell JJ, Hasegawa K, Kanzaki N, McVeigh P, Takanashi T, Tsai IJ, Assefa SA, Cock PJA et al..  2011.  Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. PLoS Pathogens. 7:e1002219.
Kiiker R, Skrabule I, Ronis A, Cooke DEL, Hansen JG, Williams IH, Mänd M, Runno-Paurson E.  2019.  Diversity of populations of Phytophthora infestans in relation to patterns of potato crop management in Latvia and Lithuania. Plant Pathology. 68:1207-1214.
Kiiker R, Hansen M, Williams IH, Cooke DEL, Runno-Paurson E.  2018.  Outcome of sexual reproduction in the Phytophthora infestans population in Estonian potato fields. European Journal of Plant Pathology. 152:395-407.
Kidwell J, Ginn F, Northcott M, Bomberg E, Hague A.  2018.  Christian climate care: Slow change, modesty and eco-theo-citizenship. Geo: Geography and Environment. 5:ArticleNo.e00059.
Kiaer LP, Weedon O, Bedoussac L, Bickler C, Finckh MR, Haug B, Iannetta PPM, Raaphorst-Travaille G, Weih M, Karley A.  2022.  Supply chain perspectives on breeding for legume–cereal intercrops. Frontiers in Plant Science.
Ki LP, Felber F, Flavell AJ, Guadagnuolo R, Guiatti D, Hauser TP, Olivieri AM, Scotti I, Syed NH, Vischi M et al..  2009.  Spontaneous gene flow and population structure in wild and cultivated chicory, Cichorium intybus L.. Genetic Resources and Crop Evolution. 56:405-419.
Khromov AV, Gushchin VA, Timerbaev VI, Kalinina NO, Taliansky ME, Makarov VV.  2018.  Guide RNA design for CRISPR/Cas9-mediated potato genome editing. Doklady Biochemistry and Biophysics. 479:90-94.
Khondoker MR, Glasbey CA, Worton BJ.  2007.  A comparison of parametric and non-parametric methods for normalising cDNA microarray data. Biometrical Journal. 49:815-823. Abstract
Khayamim F, Wetterlind J, Khademi H, Robertson AHJ, Cano AF, Stenberg B.  2015.  Using visible and near infrared spectroscopy to estimate carbonates and gypsum in soils in arid and subhumid regions of Isfahan, Iran. Journal of Near Infrared Spectroscopy. 23:155-165.
Khalid A, Arshad M, Anjum M, Mahmood T, Dawson LA.  2011.  The anaerobic digestion of solid organic waste. Waste Management. 31:1737-1744.
Kevekordes K, Holland D, H N, Jenkins S, Kos R, Roberts S, Raven JA, Scrimgeour CM, Shelly K, Stojkovic S et al..  2006.  Inorganic carbon acquisition by eight species of Caulerpa (Caulerpaceae, Chlorophyta). Phycologia. 45:442-449. Abstract
Kettle H, Donnelly R, Flint HJ, Marion G.  2014.  pH feedback and phenotypic diversity within bacterial functional groups of the human gut. Journal of Theoretical Biology. 342:62-69.
Kettle H, Holtrop G, Louis P, Flint HJ.  2018.  microPop: Modelling microbial populations and communities in R. Methods in Ecology and Evolution. 9:399-409.
Kettle H, Nutter D.  2015.  stagePop: modelling stage-structured populations in R. Methods in Ecology and Evolution. 6:1484-1490.
Kettle H, Louis P, Holtrop G, Duncan SH, Flint HJ.  2015.  Modelling the emergent dynamics and major metabolites of the human colonic microbiota. Environmental Microbiology. 17:1615-1630.
Kerschner C, Wachter P, Nierling L, Ehlers MH.  2015.  Special volume: technology and degrowth. Journal of Cleaner Production. 108:31-33.
Kerschner C, Ehlers MH.  2016.  A framework of attitudes towards technology in theory and practice. Ecological Economics. 126:139-151.
Kerr PJ, Cattadori IM, Rogers MB, Fitch A, Geber A, Liu J, Sim DG, Boag B, Eden JS, Ghedin E et al..  2017.  Genomic and phenotypic characterization of myxoma virus from Great Britain reveals multiple evolutionary pathways distinct from those in Australia. PLoS Pathogens. 13:ArticleNo.e1006252.
Kerlin D, Thirgood, S.J.; Redpath S, Miller DR, Aebischer N, Smith A, Haydon D.  2010.  State dependent dynamics of cycles in red grouse abundance. Ecography. 33(5):896-905.
Kerlin D, Haydon D, Miller D, Aebischer N, Smith A, Thirgood SJ.  2007.  Spatial synchrony in red grouse population dynamics. Oikos. 116(12):2007-2016.
Kerenyi Z, Merai Z, Hiripi L, Benkovics A, Gyula P, Lacomme C, Barta E, Nagy F, Silhavy D.  2008.  Inter-kingdom conservation of mechanism of nonense-mediated mRNA decay. EMBO Journal. 27:1585-1595.
Kerchev P, Fenton B, Foyer CH, Hancock RD.  2012.  Plant responses to insect herbivory: interactions between photosynthesis, reactive oxygen species and hormonal signalling pathways (Review). Plant Cell and Environment. 35:441-453.
Kerchev PI, Karpinska B, Morris JA, Hussain A, Verrall SR, Hedley PE, Fenton B, Foyer CH, Hancock RD.  2013.  Vitamin C and the abscisic acid-insensitive 4 transcription factor are important determinants of aphid resistance in arabidopsis. Antioxidants and Redox Signalling. 18:2091-2105.
Kenyon W, Hill G, Shannon P.  2008.  Scoping the role of agriculture in sustainable flood management. Land Use Policy. 25(3):351-360.
Kenyon F, McBean D, Greer AW, Burgess CGS, Morrison AA, Bartley DJ, Bartley Y, Devin L, Nath M, Jackson F.  2013.  A comparative study of the effects of four treatment regimes on ivermectin efficacy, body weight and pasture contamination in lambs naturally infected with gastrointestinal nematodes in Scotland. International Journal for Parasitology - Drugs and Drug Resistance. 3:77-84.
Kent M, Moyeed RA, Reid CL, Pakeman RJ, Weaver R.  2006.  Geostatistics, spatial rate of change analysis and boundary detection in plant ecology and biogeography. Progress in Physical Geography. 30(2):201-231.
Kennedy E, Curran J, Mayes B, McEvoy M, Murphy JP, O'Donovan M.  2011.  Restricting dairy cow access time to pasture in early lactation: the effects on milk production, grazing behaviour and dry matter intake. Animal. 5:1805-1813.
Kemp HF, Meier-Augenstein W.  2009.  Human provenancing of mutilated murder victims through stable isotope profiles (Review). Minerva Medicolegale. 129:219-231.
Kelly GJ, Blackstock KL, Horsey BL.  2007.  Limits to learning for developing a sustainable region: lessons from north east Queensland. Australisian Journal of Environmental Management. 14(4):231-242.
Keli A, Mayes RW, de Vega A.  2008.  In vitro studies of the metabolism of [C-14]-n-alkanes using ruminal fluid of sheep as substrate. Animal. 2(12):1748-1752.
Keith AM, van der Wal R, Brooker RW, Osler GHR, Chapman SJ, Burslem DFRP.  2006.  Birch invasion of heather moorland increases nematode diversity and trophic complexity. Soil Biology and Biochemistry. 38(12):3421-3430.
Keith AM, van der Wal R, Brooker RW, Brooker GHR, Chapman SJ, Burslem DFRP.  2009.  Strong impacts of belowground tree inputs on soil nematode trophic composition. Soil Biology and Biochemistry. 41(6):1060-1065.
Keith AM, van der Wal R, Brooker RW, Osler GHR, Chapman SJ, Burslem DFRP, Elston DA.  2008.  Increasing litter diversity reduces variability in a decomposer system. Ecology. 89(9):2657-2664.
Keefover-Ring K, Rubert-Nason KF, Bennett AE, Lindroth RL.  2016.  Growth and chemical responses of trembling aspen to simulated browsing and ungulate saliva. Journal of Plant Ecology. 9:474-484.
Kay D, Aitken M, Crowther J, Dickson I, Edwards AC, Francis C, Hopkins M, Jeffrey W, Kay C, McDonald MDATD et al..  2007.  Reducing fluxes of faecal indicator compliance parameters to bathing waters from diffuse agricultural sources: The Brighouse Bay study, Scotland. Environmental Pollution. 147(1):138-149.
Kay CD, Clifford MN, Mena P, McDougall GJ, Andres-Lacueva C, Cassidy A, Del Rio D, Kuhnert N, Manach C, Pereira-Caro G et al..  2020.  Recommendations for standardizing nomenclature for dietary (poly)phenol catabolites. American Journal of Clinical Nutrition. 112:1051-1068.
Kay D, Edwards AC, Ferrier RC, Francis C, Kay C, Rushby L, Watkins J, McDonald AT, Wyer M, Crowther J et al..  2007.  Catchment microbial dynamics: the emergence of a research agenda. Progress in Physical Geography. 31(1):59-76.
Kawaharada Y, Nielson MW, Kelly S, James EK, Andersen KR, Rasmussen SR, Fuchtbauer W, Madsen LH, Heckmann AB, Radutoiu S et al..  2017.  Differential regulation of the Epr3 receptor coordinates membrane - restricted rhizobial colonization of root nodule primordia. Nature Communications. 8:ArticleNo.14534..
Kawaharada Y, Nielson MW, Kelly S, James EK, Andersen KR, Rasmussen SR, Fuchtbauer W, Madsen LH, Heckmann AB, Radutoiu S et al..  2017.  Differential regulation of the Epr3 receptor coordinates membrane - restricted rhizobial colonization of root nodule primordia. Nature Communications. 8:ArticleNo.14534.
Kawaharada Y, James EK, Kelly S, Sandal N, Stougaard J.  2017.  The ethylene responsive factor equired for nodulation 1 (ERN1) transcription factor is required for root nodule infection in Lotus japonicus. Molecular Plant-Microbe Interactions.. 30:194-204.
Kaufmann K, Chapman SJ, Campbell CD, Harms H, Hohener P.  2006.  Miniaturized test system for soil respiration induced by volatile pollutants. Environmental Pollution. 140(2):269-278.
Katzner T, Johnson JA, Evans DM, Garner TWJ, Gompper ME, Altwegg R, Branch TA, Gordon IJ, Pettorelli N.  2013.  Challenges and opportunities for animal conservation from renewable energy development. Animal Conservation. 16:367-369.
Katzer F, Canton G, Burrells A, Palarea-Albaladejo J, Horton B, Bartley PM, Pang Y, Chianini F, Innes EA, Benavides J.  2014.  Immunization of lambs with the S48 strain of Toxoplasma gondii reduces tissue cyst burden following oral challenge with a complete strain of the parasite. Veterinary Parasitology. 205:46-56.
Kattge J, Bonisch G, Diaz S, Lavorel S, Prentice IC, Leadley P, Tautenhahn S, Werner GDA, Pakeman RJ, White PJ et al..  2020.  TRY plant trait database - enhanced coverage and open access. Global Change Biology. 26:119-188.
Kattas GD, Perez-Barberia FJ, Small M, Xu XK, Walker DM.  2013.  Unravelling complexity in inter-species interaction through nonlinear dynamical models. Acta Ethologica. 16:21-30.
Katsarou K, Wu Y, Zhang RX, Bonar N, Morris J, Hedley PE, Bryan GJ, Kalantidis K, Hornyik C.  2016.  Insight on genes affecting tuber development in potato upon Potato spindle tuber viroid (PSTVd) infection. PLoS ONE. 11:e0150711.
Kati AN, Mandrioli M, Skouras PJ, Malloch GL, Voudouris CC, Venturelli M, Manicardi GC, Tsitsipis JA, Fenton B, Margaritopoulos JT.  2014.  Recent changes in the distribution of carboxylesterase genes and associated chromosomal rearrangements in Greek populations of the tobacco aphid Myzus persicae nicotianae. Biological Journal of the Linnean Society. 113:455-470.
Katayama T, Wilkinson MD, Aoki-Kinoshita KF, Kawashima S, Yamamoto Y, Yamaguchi A, Okamoto S, Kawano S, Kim JD, Wang Y et al..  2014.  BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains. Journal of Biomedical Semantics. 5
Katayama T, Wilkinson MD, Micklem G, Kawashima S, Yamaguchi A, Nakao M, Yamamoto Y, Okamoto S, Oouchida K, Hong-Woo C et al..  2013.  The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies. Journal of Biomedical Semantics. 4
Kassim A, Poette J, Paterson A, Zait D, McCallum S, Woodhead M, Smith K, Hackett CA, Graham J.  2009.  Environmental and seasonal influences on red raspberry anthocyanin antioxidant contents and identification of quantitative traits loci (QTL). Molecular Nutrition and Food Research. 53:625-634. Abstract
Kasprowicz L, Malloch G, Pickup J, Fenton B.  2008.  Spatial and temporal dynamics of Myzus persicae clones in fields and suction traps. Agricultural and Forest Entomology. 10:91-100. Abstract
Kasprowicz L, Malloch G, Foster S, Pickup J, Zhan J, Fenton B.  2008.  Clonal turnover of MACE-carrying peach-potato aphids (Myzus persicae (Sulzer), Homoptera: Aphididae) colonizing Scotland. Bulletin of Entomological Research. 98:115-124. Abstract
Kaspersen BS, Jacobsen TV, Butts MB, Boegh E, Muller HG, Stutter MI, Fredenslund AM, Kjaer T.  2016.  Integrating climate change mitigation into river basin management planning for the Water Framework Directive - A Danish case. Environmental Science and Policy. 55:141-150.
Karuri HW, Olago D, Neilson R, Njeri E, Opere A, Ndegwa P.  2017.  Plant parasitic nematode assemblages associated with sweet potato in Kenya and their relationship with environmental variables. Tropical Plant Pathology. 42:1-12.
Karuri HW, Olago D, Neilson R, Mararo E, Villinger J.  2017.  A survey of root knot nematodes and resistance to Meloidogyne incognita in sweet potato varieties from Kenyan fields. Crop Protection. 92:114-121.
Karunakaran R, Haag AF, East AK, Ramachandran VK, Prell J, James EK, Scocchi M, Ferguson GP, Poole PS.  2010.  BacA is essential for bacteroid development in nodules of galegoid, but not phaseoloid, legumes. Journal of Bacteriology. 192:2920-2928.
Karpouzas DG, Rousidou C, Papadopoulou KK, Bekris F, Zervakis G, Singh BK, Ehaliotis C.  2009.  Effect of continuous olive mill wastewater applications, in the presence and absence of N fertilization, on the structure of the soil fungal communiies. FEMS Microbiology Ecology. 70(3):388-401.
Karpouzas DG, Singh BK.  2006.  Microbial degradation of organophosphorus xenobiotics: metabolic pathways and molecular basis. Advances in Microbial Physiology. 51:119-185.
Karpinska B, Zhang KM, Rasool B, Pastok D, Morris J, Verrall SR, Hedley PE, Hancock RD, Foyer CH.  2018.  The redox state of the apoplast influences the acclimation of photosynthesis and leaf metabolism to changing irradiance. Plant Cell and Environment. 41:1083-1097.
Kårlund A, Hanhineva K, Lehtonen M, McDougall GJ, Stewart D, Karjalainen RO.  2017.  Non-targeted metabolite profiling highlights the potential of strawberry leaves as a resource for specific bioactive compounds. Journal of the Science of Food and Agriculture. 97:2182-2190.
Karley AJ, Valentine TA, Squire GR.  2011.  Dwarf alleles differentially affect barley root traits influencing nitrogen acquisition under low nutrient supply. Journal of Experimental Botany. 62:3917-3927.
Karley AJ, Mitchell C, Brookes C, McNicol J, O'Neill T, Roberts H, Graham J, Johnson SN.  2016.  Exploiting physical defence traits for crop protection: leaf trichomes of Rubus idaeus have deterrent effects on spider mites but not aphids. Annals of Applied Biology. 168:159-172.
Karley AJ, Hawes C, Iannetta PPM, Squire GR.  2008.  Intraspecific variation in Capsella bursa-pastoris in plant quality traits for insect herbivores. Weed Research. 48:147-156. Abstract
Karley AJ, White PJ.  2009.  Moving cationic minerals to edible tissues: potassium, magnesium, calcium (Review). Current Opinion in Plant Biology. 12:291-298. Abstract
Kareem R, Cubillas P, Gluyas J, Bowen L, Hillier S, Greenwell HC.  2017.  Multi-technique approach to the petrophysical characterization of Berea sandstone core plugs (Cleveland Quarries, USA). Journal of Petroleum Science and Engineering. 149:436-455.
Karavidas I, NtatsiI G, Ntanasi T, Vlachos I, Tampakaki A, Iannetta PPM, Savvas D.  2020.  Comparative assessment of different crop rotation schemes for organic common bean production. Agronomy. 10:ArticleNo.1269.
Karanastasi E, Decraemer W, Kyriakopoulou PE, Neilson R.  2005.  First report of the stubby-root nematode Paratrichodorus teres associated with artichoke (Cynara scolymus) in Greece. Plant Disease. 89:-685. Abstract
Karanastasi E, Neilson R, Decraemer W.  2006.  First record of two trichodorid nematode species Paratrichodorus minor and Trichodorus sparsus (Nematoda: Trichodoridae Thorne 1935) from Greece. Annals of the Benaki Phytopathological Institute. 20:129-133.
Karami N, Clemente R, Moreno-Jimenez E, Lepp NW, Beesley L.  2011.  Efficiency of green waste compost and biochar soil amendments for reducing lead and copper mobility and uptake to ryegrass. Journal of Hazardous Materials. 191:41-48.
Kaplan IB, Lee L, Ripoll DR, Palukaitis P, Gildow FE, Gray SM.  2007.  Point mutations in the potato leafroll virus major capsid protein alter virion stability and aphid transmission. Journal of General Virology. 88:1821-1830. Abstract
Kapfer J, Birks HJB, Felde VA, Klanderud K, Martinessen T, Ross LC, Schei FH, Virtanen R, Grytnes JA.  2013.  Long-term vegetation stability in northern Europe as assessed by changes in species co-occurrences. Plant Ecology and Biodiversity. 6:289-302.
Kanyuka K, Druka A, Caldwell DG, Tymon A, McCallum N, Waugh R, Adams MJ.  2005.  Evidence that the recessive bymovirus resistance locus rym4 in barley corresponds to the eukaryotic translation initiation factor 4E gene. Molecular Plant Pathology. 6:449-458. Abstract
Kanvil S, Pham J, Lopez-Cobollo R, Selby M, Bennett M, Beckingham C, Powell G, Turnbull C.  2017.  Cucurbit extrafascicular phloem has strong negative impacts on aphids and is not a preferred feeding site. Plant Cell and Environment. 40:2780-2789.
Kanetis L, Pittas L, Nikoloudakis N, Cooke DEL, Ioannou N.  2021.  Characterization of Phytophthora infestans populations in Cyprus, the southernmost potato-producing European country. Plant Disease. Published online.
Kamoun S, Furzer O, Jones JDG, Judelson HS, Ali GS, Dalio RJD, Roy SG, Schena L, Zambounis A, Panabieres F et al..  2015.  The top 10 oomycete pathogens in molecular plant pathology. Molecular Plant Pathology. 16:413-434.
Kammer PM, Schoeb C, Eberhard G, Gallina R, Meyer R, Tschanz C.  2013.  The relationship between soil water storage capacity and plant species diversity in high alpine vegetation. Plant Ecology and Diversity. 6:457-466.
Kamei H, Cock PJA.  2013.  Computation of balanced equivalence relations and their lattice for a coupled cell network. Siam Journal on Applied Dynamical Systems. 12:352-382.
Kamari J, Boorman D, Icke J, Perrin C, Candela L, Elorza FJ, Ferrier RC, Bakken TH, Hutchins M.  2006.  Process for benchmarking models: dialogue between water managers and modellers. Archiv fur Hydrologie, Large Rivers Supplement. 17(1-2):3-21.
Kalyna M, Simpson CG, Syed NH, Lewandowska D, Marquez Y, Kusenda B, Marshall J, Fuller J, Cardle L, McNicol JW et al..  2012.  Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis. Nucleic Acids Research. 40:2454-2469.
Kalyandurg PB, Sundararajan P, Dubey M, Ghadamgahi F, Zahid MA, Whisson S, Vetukuri RR.  2021.  Spray-induced gene silencing as a potential tool to control potato late blight disease. Phytopathology. Published online..
Kalogiros DI, Adu MO, White PJ, Broadley MR, Draye X, Ptashnyk M, Bengough AG, Dupuy LX.  2016.  Analysis of root growth from a phenotyping data set using a density-based model. Journal of Experimental Botany. 67:1045-1058.
Kalogiros DI, Adu MO, White PJ, Broadley MR, Draye X, Ptashnyk M, Bengough AG, Dupuy LX.  2016.  Analysis of root growth from a phenotyping data set using a density-based model. Journal of Experimental Botany.. 67:1045-1058.
Kallscheuer N, Menezes R, Foito A, Silva MH, Braga A, Dekker W, Sevillano DM, Rosado-Ramos R, Jardim C, Oliveira J et al..  2019.  Identification and microbial production of the raspberry phenol Salidroside that is active against Huntington’s Disease. Plant Physiology. 179:969-985.
Kallscheuer N, Menezes R, Foito A, Silva MH, Braga A, Dekker W, Sevillano DM, Rosado-Ramos R, Jardim C, Oliveira J et al..  2018.  Identification and microbial production of the raspberry phenol Salidroside that is active against Huntington’s Disease. Plant Physiology. 179:969-985.
Kalinina NO, Khromov A, Love AJ, Taliansky ME.  2020.  CRISPR applications in plant virology: virus resistance and beyond. Phytopathology. 110:18-28.
Kalinina NO, Makarova S, Makhotenko A, Love AJ, Taliansky M.  2018.  The multiple functions of the nucleolus in plant development, disease and stress responses. Frontiers in Plant Science. 9:ArticleNo.132..
Kalendar R, Flavell AJ, Ellis THN, Sjakste T, Moisy C, Schulman AH.  2011.  Analysis of plant diversity with retrotransposon-based molecular markers. Heredity. 106:520-530.
Kakkar K, Keijzer C, Rodier M, Bukharova T, Taliansky M, Love AJ, Milner JJ, Karimullah AS, Barron LD, Gadegaard N et al..  2020.  Superchiral near fields detect virus structure. Light: Science and Applications. 9:ArticleNo.195.
Kaczmareka M, Piotrowska MJ, Fountaine JM, Gorniak K, McGrann GRD, Armstrong A, Wright KM, Newton AC, Harvis ND.  2017.  Infection strategy of Ramularis collo-cygni and development of Ramularia leaf spot on barley and alternate graminaceous hosts. Plant Pathology. 66:45-55.
Kaczmarek A, MacKenzie K, Kettle H, Blok VC.  2014.  Influence of soil temperature on Globodera rostochiensis and Globodera pallida. Phytopathologia Mediterranea. 53:396-405.
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Jurado NV, Tanner AE, Blevins SR, McNair HM, Mayes RW, Lewis RM.  2015.  Long-chain alcohols did not improve predictions of the composition of tall fescue and red clover mixtures over n-alkanes alone. Grass and Forage Science. 70:499-506.
Jupe J, Stam R, Howden AJM, Morris JA, Zhang R, Hedley PE, Huitema E.  2013.  Phytophthora capsici-tomato interaction features dramatic shifts in gene expression associated with a hemi-biotrophic lifestyle. Genome Biology. 14:R63.
Jupe F, Witek K, Verweij W, Sliwka J, Pritchard L, Etherington GJ, MacLean D, Cock PJ, Leggett RM, Bryan GJ et al..  2013.  Resistance gene enrichment sequencing (RenSeq) enables reannotation of the NB-LRR gene family from sequenced plant genomes and rapid mapping of resistance loci in segregating populations. Plant Journal. 76:530-544.
Jupe F, Pritchard L, Etherington G, MacKenzie K, Cock PJA, Wright F, Sharma SK, Bolser D, Bryan GJ, Jones J et al..  2012.  Identification and localisation of the NB-LRR gene family within the potato genome. BMC Genomics. 13:1-14.
Jungsberg L, Copus A, Herslund LB, Nilsson K, Perjo L, Randall L, Berlina A.  2020.  Key actors in community-driven social innovation in rural areas in the Nordic countries. Journal of Rural Studies. 79:276-285.
Julie I, Damian M, Clive B, Barnes A, Bear C, Bell M, Cutress D, Davies L, de Boon A, Dinnie L et al..  2022.  What are the priority research questions for digital agriculture. Land Use Policy.
Juedtz K, Aberdein N, Stewart D, McDougall GJ.  2013.  Sequential extraction of black currant residues produce anthocyanin-rich extracts containing anthocyanin dimers. Journal of Berry Research. 3:53-64.
Judge J, Davidson RS, Marion G, White PCL, Hutchings MR.  2007.  Persistence of Mycobacterium avium subspecies paratuberculosis in rabbits: the interplay between horizontal and vertical transmission. Journal of Applied Ecology. 44:302-311. Abstract
Judelson HS, Ah Fong AMV, Aux G, Avrova AO, Bruce CR, Cakir C, da Cunha L, Grenville-Briggs LJ, Latijnhouwers M, Ligterink W et al..  2008.  Gene expression profiling during asexual development of the late blight pathogen Phytophthora infestans reveals a highly dynamic transcriptome. Molecular Plant-Microbe Interaction. 21:433-447. Abstract
Jude SR, Jones AP, Watkinson AR, Brown I, Gill JA.  2007.  The development of a visualization methodology for integrated coastal management. Coastal Management. 35(5):525-544.
Joynson R, Pritchard L, Osemwekha E, Ferry N.  2017.  Metagenomic analysis of the gut microbiome of the common black slug arion ater in search of novel lignocellulose degrading enzymes. Frontiers in Microbiology. 9:ArticleNo.2181.
Joy EJM, Ander EL, Young SD, Black CR, Watts MJ, Chilimba ADC, Chilimba B, Siyame EWP, Kalimbira AA, Hurst R et al..  2014.  Dietary mineral supplies in Africa. Physiologia Plantarum. 151:208-229.
Jouet A, Saunders DGO, McMullan M, Ward B, Furzer O, Jupe F, Cevik V, Hein I, Thilliez GJA, Holub E et al..  2019.  Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytologist. 221:1529-1543.
Jouet A, Saunders DGO, McMullan M, Ward B, Furzer O, Jupe F, Cevik V, Hein I, Thilliez GJA, Holub E et al..  In Press.  Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytologist. Published online..
Josuttis M, Verrall S, Stewart D, Kruger E, McDougall GJ.  2013.  Genetic and environmental effects on tannin composition in strawberry (Fragaria x ananassa) cultivars grown in different European locations. Journal of Agricultural and Food Chemistry. 61:790-800.
Jost M, Hensel G, Kappel C, Druka A, Sicard A, Hohmann U, Beier S, Himmelbach A, Waugh R, Kumlehn J et al..  2016.  The INDETERMINATE DOMAIN protein BROAD LEAF1 limits barley leaf width by restricting lateral proliferation. Current Biology. 26:903-909.
Jost M, Taketa S, Mascher M, Himmelbach A, Yuo T, Shahinnia F, Rutten T, Druka A, Schmutzer T, Steuernagel B et al..  2016.  A homolog of Blade-On-Petiole 1 and 2 (BOP1/2) controls internode length and homeotic changes of the barley inflorescence. Plant Physiology. 171:1113-1127.
Joshi MV, Mann SG, Antelmann H, Widdick DA, Fyans JK, Chandra G, Hutchings MI, Toth IK, Hecker M, Loria R et al..  2010.  The twin arginine protein transport pathway exports multiple virulence proteins in the plant pathogen Streptomyces scabies. Molecular Microbiology. 77:252-271.
Jordan MO, Wendler R, Millard P.  2012.  Autumnal N storage determines the spring growth, N uptake and N internal cycling of young peach trees. Trees - Structure and Function. 26:393-404.
Jordan MO, Wendler R, Millard P.  2009.  The effect of autumn N supply on the architecture of young peach (Prunus persica L.) trees. Trees. 23(2):235-245.
Jones E, Webb SD, Ruiz-Fons JF, Albon S, Gilbert L.  2011.  The effect of landscape heterogeneity and host movement on a tick-borne pathogen. Theoretical Ecology. 4:435-448.
Jones HG.  2014.  The use of indirect or proxy markers in plant physiology. Plant Cell and Environment.
Jones MR, Raven JA, Leith ID, Cape JN, Smith RI, Fowler D.  2008.  Short-term flux chamber experiment to quantify the deposition of gaseous 15N-NH3 to Calluna vulgaris. Agricultural and Forest Meteorology. 148:893-901. Abstract
Jones MR, Leith ID, Fowler D, Raven JA, Sutton MA, Nemitz E, Cape JN, Sheppard LJ, Smith RI.  2007.  Concentration-dependent NH3 deposition processes for stomatal and non-stomatal moorland species. Atmospheric Environment. 41:8990-8994. Abstract
Jones JT, Kumar A, Pylypenko LA, Thirugnanasambandam A, Castelli L, Chapman S, Cock PJA, Grenier E, Lilley CJ, Phillips MS et al..  2009.  Identification and functional characterisation of effectors in expressed sequence tags from various life cycle stages of the potato cyst nematode Globodera pallida. Molecular Plant Pathology. 10:815-828.
Jones S, Cowan G, MacFarlane S, Mukoye B, Mangeri BC, Were H, Torrance L.  2020.  RNA sequence analysis of diseased groundnut (Arachis hypogaea) reveals the full genome of groundnut rosette assistor virus (GRAV). Virus Research. 277:ArticleNo.197837.
Jones JT, Moens M, Mota M, Li HM, Kikuchi T.  2008.  Bursaphelenchus xylophilus: opportunities in comparative genomics and molecular host-parasite interactions (Review). Molecular Plant Pathology. 9:357-368. Abstract
Jones MA, Williams BA, McNicol JW, Simpson CG, Brown JWS, Harmer SL.  2012.  Mutation of Arabidopsis spliceosomal timekeeper locus 1 causes circadian clock defects. The Plant Cell. 24:4066-4082.
Jones MR, Leith ID, Fowler D, Raven JA, Sutton MA, Nemitz E, Cape JN, Sheppard LJ, Smith RI, Theobold MR.  2007.  Concentration-dependent NH3 deposition processes for mixed moorland semi-natural vegetation. Atmospheric Environment. 41:2049-2060. Abstract
Jones HG, Serraj R, Loveys BR, Xiong LH, Wheaton A, Price AH.  2009.  Thermal infrared imaging of crop canopies for the remote diagnosis and quantification of plant responses to water stress in the field.. Functional Plant Biology. 36:978-989.
Jones HG.  2010.  Can water droplets on leaves cause leaft scorch? New Phytologist. 185:865-867.
Jones JT, Haegeman A, Danchin EGJ, Gaur HS, Helder J, Jones MGK, Kikuchi T, Manzanilla-Lopez R, Palomares-Rius JE, Wesemael WML et al..  2013.  Top 10 plant parasitic nematodes in molecular plant pathology. Molecular Plant Pathology. 14:946-961.
Jones HG.  2012.  How do rootstocks control shoot water relations? New Phytologist. 194:301-303.
Jones JT, Furlanetto C, Phillips M.  2007.  The role of flavonoids produced in response to cyst nematode infection of Arabidopsis thaliana. Nematology. 9:671-677. Abstract
Jones J, Witek K, Verweij W, Jupe F, Cooke DEL, Dorling S, Tomlinson L, Smoker M, Perkins S, Foster S.  2014.  Elevating crop disease resistance with cloned genes. Philosophical Transactions of the Royal Society B, Biological Sciences.. 369:ArticleNo20130087.
Jones CM, Spor A, Brennan FP, Breuol MC, Bru D, Lemanceau P, Griffiths B, Hallin S, Philppot L.  2014.  Recently identified microbial guild mediates soil N2O sink capacity. Nature Climate Change. 4:801-805.
Jones HG, Hillis RM, Gordon SL, Brennan RM.  2013.  An approach to the determination of winter chill requirements for different Ribes cultivars. Plant Biology. 15:18-27.
Jones HG, Hutchinson PA, May T, Jamali H, Deery DM.  2018.  A practical method using a network of fixed infrared sensors for estimating crop canopy conductance and evaporation rate. Biosystems Engineering. 165:59-69.
Jones HG.  2014.  Remote sensing of plant stresses and its use in irrigation management. Acta Horticulturae. 1038:239-247.
Jones HG, Gordon SL, Brennan RM.  2015.  Chilling requirement of Ribes cultivars. Frontiers in Plant Science. 5
Jones S, Baizan-Edge A, MacFarlane S, Torrance L.  2017.  Viral diagnostics in plants using next generation sequencing: computational analysis in practice. Frontiers in Plant Science. 8:ArticleNo.1770.
Jones AT, Cowan GH, McGavin WJ, Roberts IM, Torrance L.  2005.  Production and properties of monoclonal antibodies to Solanum nodiflorum mottle sobemovirus. Annals of Applied Biology. 146:321-325. Abstract
Johnston S, Grune T, Bell L, Murray S, Souter D, Erwin S, Yearsley J, Gordon I, Illius A, Kyriazakis I et al..  2006.  Having it all - historical energy intakes do not generate the anticipated trade-offs in fecundity. Proceedings of the Royal Society of London, B. 273(1592):1369-1374.
Johnston SL, Souter DM, Erwin SS, Tolkamp BJ, Yearsley JM, Gordon IJ, Illius AW, Kyriazakis I, Speakman JR.  2007.  Associations between basal metabolic rate and reproductive performance in C57BL/6J mice. Journal of Experimental Biology. 210(1):65-74.
Johnson SN, Benefer CM, Frew A, Griffiths BS, Hartley SE, Karley AJ, Rasmann S, Schumann M, Sonnemann I, Robert CAM.  2016.  New frontiers in belowground ecology for plant protection from root-feeding insects. Applied Soil Ecology. 108:96-107.
Johnson SN, Clark KE, Hartley SE, Jones TH, McKenzie SW, Koricheva J.  2012.  Aboveground-belowground herbivore interactions: a meta-analysis. Ecology. 93:2208-2215.
Johnson SN, Crawford JW, Gregory PJ, Grinev DV, Mankin RW, Masters GJ, Murray PJ, Wall DH, Zhang X.  2007.  Non-invasive techniques for investigating and modelling root-feeding insects in managed and natural systems. Agricultural and Forest Entomology. 9:39-46.
Johnson SN, Gregory PJ, McNicol JW, Oodally Y, Zhang XX, Murray PJ.  2010.  Effects of soil conditions and drought on egg hatching and larval survival of the clover root weevil (Sitona lepidus). Applied Soil Ecology. 44:75-79.
Johnson SN, Karley AJ, Gregory PJ, Brennan RM.  2017.  Editorial: Crop traits for defense against pests and disease: durability, breakdown and future prospects. Frontiers in Plant Science. 8:ArticleNo.209.
Johnson D, Gilbert L.  2015.  Interplant signalling through hyphal networks. New Phytologist. 205:1448-1453.
Johnson SN, Gregory PJ, Greenham JR, Zhang X, Murray PJ.  2005.  Attractive properties of an isoflavonoid found in white clover root nodules on the clover root weevil. Journal of Chemical Ecology. 31:2223-2229. Abstract
Johnson D, Anderson IC, Williams A, Whitlock R, Grime J.  2010.  Plant genotypic diversity does not beget root-fungal species diversity. Plant and Soil. 336(1-2):107-111.
Johnson SN, Staley JT, McLeod FAL, Hartley SE.  2011.  Plant-mediated effects of soil invertebrates and summer drought on above-ground multitrophic interactions. Journal of Ecology. 99:57-65.
Johnson SN, Birch ANE, Gregory PJ, Murray PJ.  2006.  The 'mother knows best' principle: should soil insects be included in the preference-performance debate? Ecological Entomology. 31:395-401. Abstract
Johnson SN, Mitchell C, McNicol JW, Thompson J, Karley AJ.  2013.  Downstairs drivers - root herbivores shape communities of above-ground herbivores and natural enemies via changes in plant nutrients. Journal of Animal Ecology. 82:1021-1030.
Johnson SN, Zhang X, Crawford JW, Gregory PJ, Young IM.  2007.  Egg hatching and survival time of soil-dwelling insect larvae: a partial differential equation model and experimental validation. Ecological Modelling. 202:493-502. Abstract
Johnson SN, Hallett PD, Gillespie TL, Halpin C.  2010.  Below-ground herbivory and root toughness: a potential model system using lignin-modified tobacco. Physiological Entomology. 35:186-191. Abstract
Johnson SN, Barton AT, Clark KE, Gregory PJ, McMenemy LS, Hancock RD.  2011.  Elevated atmospheric carbon dioxide impairs the performance of root-feeding vine weevils by modifying root growth and secondary metabolites. Global Change Biology. 17:688-695.
Johnson SN, Zhang X, Crawford J, Gregory PJ, Hix N, Jarvis S, Murray PJ, Young IM.  2006.  Effects of CO2 on the searching behaviour of the root-feeding clover weevil Sitona lepidus (Coleoptera: Curculionidae). Bulletin of Entomological Research. 96:361-366. Abstract
Johnson SN, Anderson EA, Dawson G, Griffiths DW.  2008.  Varietal susceptibility of potatoes to wireworm herbivory. Agricultural and Forest Entomology. 10:167-174. Abstract
Johnson SN, Petitjean S, Clark KE, Mitchell C.  2010.  Protected raspberry production accelerates onset of oviposition by vine weevils (Otiorhynchus sulcatus). Agricultural and Forest Entomology. 12:277-283.
Johnson D, Vachon J, Britton AJ, Helliwell RC.  2011.  Drought alters carbon fluxes in alpine snowbed ecosystems through contrasting impacts on graminoids and forbs. New Phytologist. 190:740-749.
Johnson SN, Gregory PJ.  2006.  Chemically mediated host-plant location and selection by root-feeding insects. Physiological Entomology. 31:1-13. Abstract

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.