Publications list
The Phytophthora infestans haustorium is a site for secretion of diverse classes of infection-associated proteins. MBIO. 9:ArticleNo.e01216-18.
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2018.
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2022.
Greenhouse gas emissions from the Tibetan alpine grassland: Effects of nitrogen and phosphorus addition. Sustainability. 10:ArticleNo.4454.
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2018.
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2020.
Limited effect of planting transgenic rice on the soil microbiome studied by continuous (CO2)-C-13 labeling combined with high-throughput sequencing. Applied Microbiology and Biotechnology. 103:4217-4227.
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2019.
Within-year changes in hydraulic properties of a shallow entisol in farmland and forestland. Vadose Zone Journal. 14
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2015.
Breeding histories and selection criteria for oilseed rape in Europe and China identified by genome wide pedigree dissection. Scientific Reports. 7:ArticleNo.1916.
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2017.
Simulated root exudates stimulate the abundance of Saccharimonadales to improve the potential of organic phosphorus mobilization in maize rhizosphere. Applied Soil Ecology. 170:ArticleNo.104274.
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2021.
Haustorium formation and a distinct biotrophic transcriptome characterize infection of Nicotiana benthamiana by the tree pathogen Phytophthora kernoviae. Molecular Plant Pathology. Published online..
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2021.
Incorporation of urea-derived C-13 into microbial communities in four different agriculture soils. Biology and Fertility of Soils. 50:603-612.
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2014.
Induced resistance for plant disease control: maximizing the efficacy of resistance elicitors. Phytopathology. 95:1368-1373. Abstract
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2005.
Control of foliar diseases in barley: towards an integrated approach. European Journal of Plant Pathology. 133:33-73.
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2012.
First evidence of retained sexual capacity and survival in the pyrethroid resistant Sitobion avenae (F.) (Hemiptera: Aphididae) SA3 super-clone following exposure to a pyrethroid at current field-rate. Irish Journal of Agriculture and Food Research. 58:21-26.
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2019.
The response of process-based agro-ecosystem models to within-field variability in site conditions. Field Crops Research. 228:1-19.
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2018.
Multimodel ensembles improve predictions of crop-environment-management interactions. Global Change Biology. 24:5072-5083.
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2018.
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2012.
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2014.
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2013.
Undernutrition and stage of gestation influence fetal adipose tissue gene expression. Journal of Molecular Endocrinology. 54:263-275.
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2015.
Inter-pregnancy weight change and the risk of recurrent pregnancy complications. PLoS ONE. 11:e0154812.
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2016.
Searching for the origins of bere barley: a geometric morphometric approach to cereal landrace recognition in archaeology. Journal of Archaeological Method and Theory. 26:1125-1142.
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2019.
Inter-pregnancy weight change and the risk of recurrent pregnancy complications. PLoS ONE. 11:e0154812.
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2016.
A synthesis of soil biodiversity and ecosystem functioning in Victoria Land, Antarctica. Soil Biology & Biochemistry. 38:3001-3002. Abstract
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2006.
Ascorbic acid content of blackcurrant fruit is influenced by both genetic and enviromental factors. Functional Plant Science and Biotechnology. 4:40-52.
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2010.
Inferring networks from multivariate symbolic time series to unravel behavioural interactions among animals. Animal Behaviour. 79(2):351-359.
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2010.
A putative DEAD-box RNA-helicase is required for normal zoospore development in the late blight pathogen Phytophthora infestans. Fungal Genetics and Biology. 45:954-962. Abstract
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2008.
Dominant and diet-responsive groups of bacteria within the human colonic microbiota. International Society for Microbial Ecology (ISME) Journal. 5:220-230.
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2011.
Recreation of lowland heathland on ex-arable land: assessing the limiting processes on two sites with contrasting soil fertility and pH. Journal of Applied Ecology. 44(3):573-582.
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2007.
Stochastic modelling of ecological processes using hybrid Gibbs samplers. Ecological Modelling. 198(1-2):40-52.
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2006.
High-throughput monolithic HPLC method for rapid vitamin C phenotyping of berry fruit. Phytochemical Analysis. 17:284-290. Abstract
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2006.
Is bigger necessarily better for environmental research? Scientometrics. 78:317-322.
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2009.
Neither the public nor experts judge species primarily on their origins. Environmental Conservation. 42:349-355.
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2015.
The influence of information provision on people's landscape preferences: a case study on understorey vegetation of deer-browsed woodlands. Landscape and Urban Planning. 124:129-139.
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2014.
Governance change and institutional adaptation: a case study from Harenna Forest, Ethiopia. Environmental Management. 51:912-985.
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2013.
Habitat selective factors influencing the structural composition and functional capacity of microbial communities in agricultural soils. Soil Biology and Biochemistry. 40(3):803-813.
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2008.
Evidence for widespread anoxia in the proglacial zone of an Arctic glacier. Chemical Geology. 243(1-2):1-15.
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2007.
Impact of predicted precipitation scenarios on multitrophic interactions. Functional Ecology. 31:1647-1658.
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2017.
Among population differentiation at nuclear genes in native Scots pine (Pinus sylvestris L.) in Scotland. Flora - Morphology, Distribution, Functional Ecology of Plants. 208:79-96.
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2013.
Effect of salinity on water relations of wild barley plants differing in salt tolerance. AoB Plants. :-plq006.
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2010.
Herbivory and climate as drivers of woody plant growth - do deer decrease the impacts of warming? Ecological Applications. Published online..
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In Press.
Large-scale risk screening of raw water quality in the context of drinking water catchments and integrated response strategies. Environmental Science and Policy. 100:84-93.
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2019.
Editorial - Agent-based modelling for resilience. Ecological Complexity. 40:ArticleNo.100775.
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2019.
Quantifying rhizosphere particle movement around mutant maize roots using time-lapse imaging and particle image velocimetry. European Journal of Soil Science. 61:926-939.
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2010.
Chitin-binding protein of verticillium nonalfalfae disguises fungus from plant chitinases and suppresses chitin-triggered host immunity. Molecular Plant Microbe Interactions. 32:1378-1390.
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2019.
Physiological mechanism of low purine derivative excretion in urine of buffaloes compared with Bos taurus cattle. Animal Production Science. 49(11):994-997.
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2009.
Shellfish aquaculture and resilience - leadership experiences from Kesennuma Bay, Japan. Marine Policy. 92:111-119.
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2018.
‘Not in my bin’: consumer’s understanding and concern of food waste effects and mitigating factors. Sustainability. 12:ArticleNo.5685.
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2020.
Reproducibility of species lists, visual cover estimates and frequency methods for recording high-mountain vegetation. Journal of Vegetation Science. 21:1035-1047.
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2010.
Reproducibility of species lists, visual cover estimates and frequency methods for recording high-mountain vegetation. Journal of Vegetation Science. 21:1035-1047.
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2010.
Web technologies for environmental Big Data. Environmental Modelling and Software. 63:185-198.
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2015.
Sequencing the potato genome: Outline and first results to come from the elucidation of the sequence of the world's most important food crop. American Journal of Potato Research. 86:417-429.
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2009.
Analysis of spatio-temporal properties of stochastic systems using TSTL. ACM Transactions on Modeling and Computer Simulation. 29:ArticleNo.20.
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2019.
Genome-wide association mapping of frost tolerance in barley (Hordeum vulgare L.). BMC Genomics. 14:424.
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2013.
Symplastic connection is required for bud outgrowth following dormancy in potato (Solanum tuberosum L.) tubers. Plant, Cell and Environment. 30:973-983. Abstract
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2007.
Quantitative assessment of increased sensitivity of chronic laminitic horses to hoof tester evoked pain. Equine Veterinary Journal. 43:62-68.
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2011.
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2008.
An appraisal of potential for sowing of nasturtium officinale into streams to mitigate nutrient pollution in Eastern Scotland. International Journal of Environmental Research and Public Health. 17:ArticleNo.895.
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2020.
Comparison of microbial community assays for the assessment of stream biofilm ecology. Journal of Microbiological Methods. 85:190-198.
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2011.
Application of the WFD cost proportionality principle to diffuse pollution mitigation: a case study for Scottish Lochs. Journal of Environmental Management. 97:28-37.
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2012.
Assessment of the use of sediment fences for control of erosion and sediment phosphorus loss after potato harvesting on sloping land. Science of the Total Environment. 468-469:1234-1244.
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2014.
Water for all: towards an integrated approach to wetland conservation and flood risk reduction in a lowland catchment in Scotland. Journal of Environmental Management. 246:881-896.
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2019.
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2017.
A tool for cost-effectiveness analysis of field scale sediment-bound phosphorus mitigation measures and applications. Science of the Total Environment. 586:631-641.
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2017.
Microbial pollution of water by livestock: approaches to risk assessment and mitigation. Animal. 3(5):744-752.
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2009.
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2009.
A field trial to evaluate the pollution potential to ground and surface waters from woodchip corrals for overwintering livestock outdoors. Soil Use and Management. 22(1):82-94.
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2006.
Combining inorganic and organic carbon stable isotope signatures in the Schwalbenberg Loess-palaeosol-sequence near Remagen (Middle Rhine Valley, Germany). Frontiers in Earth Science. 8:ArticleNo.276.
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2020.
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2014.
Accumulation of potassium, rubidium and caesium (133Cs and 137Cs) in various fractions of soil and fungi in a Swedish forest. The Science of the Total Environment. 408:2543-2548.
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2010.
Potential environment and public health risk due to contamination of heavy metals from industrial waste water in Lam Thao, Phu Tho, Vietnam. American Journal of Environmental Sciences. 8:71-78.
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2012.
Remobilization of acorn nitrogen for seedling growth in holm oak (Quercus ilex), cultivated with contrasting nutrient availability. Tree Physiology.. 30(2):257-263.
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2010.
Experimental evidence that livestock grazing intensity affects the activity of a generalist predator. Acta Oecologia. 49:12-16.
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2013.
Experimental evidence that livestock grazing intensity affects cyclic vole population regulation processes. Population Ecology. 56:55-61.
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2014.
The Enhanced Vegetation Index (EVI) as a proxy for diet quality and composition in a mountain ungulate. Ecological Indicators. 61:658-666.
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2016.
Diversity deficits in modelled landscape mosaics. Ecological Informatics. 6:73-82.
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2011.
The social metabolism of Scotland: an environmental perspective. Energy Policy. 100:304-313.
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2017.
More plant growth but less plant defence? First global gene expression data for plants grown in soil amended with biochar Global Change Biology Bioenergy. Published online.
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2014.
More plant growth but less plant defence? First global gene expression data for plants grown in soil amended with biochar Global Change Biology Bioenergy. 7:658-672.
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2015.
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2016.
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2016.
Phytophthora infestans effector Pi14054 is a novel candidate suppressor of host silencing mechanisms. European Journal of Plant Pathology. 149:771-777.
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2017.
Genome sequence resource for the oomycete taro pathogen Phytophthora colocasiae. Molecular Plant-Microbe Interactions. 31:903-905.
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2018.
Draft genome sequence for the tree pathogen Phytophthora plurivora. Genome Biology and Evolution. 10:2432-2442.
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2018.
Phenotypic diversification by gene silencing in Phytophthora plant pathogens. Communicative and Integrative Biology. 6:e25890.
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2013.
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2011.
Evidence for involvement of Dicer-like, Argonaute and histone deacetylase proteins in gene silencing in Phytophthora infestans. Molecular Plant Pathology. 12:772-785.
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2011.
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2012.
Spray induced gene silencing an innovative strategy for plant trait improvement and disease control. Crop Breeding and Applied Biotechnology.
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2021.
A polygalacturonase-inhibiting protein with a role in pea defence against the cyst nematode Heterodera goettingianna. Molecular Plant Pathology. 12:275-287.
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2011.
New technological interventions in conservation conflicts: Countering emotions and contested knowledge. Human Ecology. 45:683-695.
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2017.
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2015.
Imagining wildlife: New technologies and animal censuses, maps and museums. Geoforum. 75:75-86.
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2016.
Effects of landscape configuration on mapping ecosystem service capacity: a review of evidence and a case study in Scotland. Landscape Ecology. 31:1457-1479.
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2016.
Environmental conditions influence red grouse ornamentation at a population level. Biological Journal of the Linnean Society. 107:788-798.
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2012.
The condition dependence of a secondary sexual trait is stronger under high parasite infection level. Behavioural Ecology. 23:502-511.
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2012.
Environmental heterogeneity influences the reliability of secondary sexual traits as condition indicators. Journal of Evoluationary Biology. 25:20-28.
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2012.
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2011.
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2012.
Modeling soil processes: Review, key challenges, and new perspectives. Vadose Zone Journal. 15
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2016.
Varied movement strategies employed by triple gene block encoding viruses (Review). Molecular Plant-Microbe Interactions. 23:1231-1247.
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2010.
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2021.
Anthocyanin-enriched bilberry and blackcurrant extracts modulate amyloid precursor protein processing and alleviate behavioral abnormalities in the APP/PS1 mouse model of Alzheimer's disease. Journal of Nutritional Biochemistry. 24:360-370.
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2013.
Intraspecific chemical communication in microalgae. New Phytologist. 215:516-530.
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2017.
Erwinia chrysanthemi 3937 PhoQ sensor kinase regulates several virulence determinants. Journal of Bacteriology. 188:3088-3098. Abstract
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2006.
Opportunities for improving phosphorus-use efficiency in crop plants. New Phytologist. 195:306-320.
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2012.
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2016.
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2014.
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2013.
Singlet oxygen quenching by phenylamides and their parent compounds. Zeischrift f. 62c:833-838.
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2007.
Increased mass of reticulo-rumen tissue and contents with advancing age in Svalbard reindeer. Journal of Zoology. 278(1):15-23.
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2009.
Evidence for a trade-off between early growth and tooth wear in Svalbard reindeer. Journal of Animal Ecology. 76(6):1139-1148.
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2007.
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2017.
Recognition of an Avr3a homologue plays a major role in mediating nonhost resistance to Phytophthora capsici in Nicotiana species. Molecular Plant Microbe Interactions. 27:770-780.
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2014.
Chitosan primes plant defence mechanisms against Botrytis cinerea, including expression of Avr9/Cf-9 rapidly-elicited genes. Plant, Cell and Environment. 44:290-303.
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2021.
Post-translational modifications in priming the plant immune system: ripe for exploitation? FEBS Letters. 592:1929-1936.
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2018.
Interventions on democratizing infrastructure. Political Geography. 87:ArticleNo.102378.
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2021.
What can energy research bring to social science? Reflections on 5 years of Energy Research and Social Science and beyond Energy Research and Social Science. 57:ArticleNo.101240.
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2019.
Food self-provisioning in Europe - an exploration of sociodemographic factors in five regions. Rural Sociology. Published online..
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2017.
Food self-provisioning in Europe: an exploration of sociodemographic factors in five regions. Rural Sociology. 83:431-461.
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2018.
Food self-provisioning in Europe - an exploration of sociodemographic factors in five regions. Rural Sociology. 83:431-461.
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2018.
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2007.
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2008.
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2017.
Editorial: Transitions to sustainable food and feed systems. Frontiers in Plant Science. 10:ArticleNo.1283.
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2019.
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2019.
A plant alternative to animal caspases: subtilisin-like proteases. Cell Death and Differentiation. 18:1289-1297.
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2011.
Analytical and decision support tools for genomics-assisted breeding. Trends in Plant Science. 21:354-363.
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2016.
A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics. 114:1091-1103. Abstract
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2007.
Dynamics of the macroinvertebrate community and food web of a Mediterranean stream. Journal of Freshwater Ecology. 32:223-239.
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2017.
A systems biology view of responses to lignin biosynthesis perturbations in Arabidopsis. The Plant Cell. 24:3506-3529.
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2012.
Caffeoyl Shikimate Esterase (CSE) is an enzyme in the lignin biosynthetic pathway. Science. 341:1103-1106.
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2013.
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2015.
Inactivation of PbTopo III beta causes hyper-excision of the Pathogenicity Island HAI2 resulting in reduced virulence of Pectobacterium atrosepticum. Molecular Microbiology. 84:648-663.
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2012.
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2008.
Influence of livestock grazing on meadow pipit foraging behaviour in upland grassland. Basic and Applied Ecology. 10:662-670.
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2009.
Consequences for a host-parasitoid interaction of host-plant aggregation, isolation and phenology. Ecological Entomology. 32:419-427. Abstract
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2007.
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2016.
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2009.
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2012.
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2008.
Conversion of lowland tropical forests to tree cash crop plantations loses up to one-half of stored soil organic carbon. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 112:9956-9960.
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2015.
Variability in the intensity of nematode larvae from gastrointestinal tissues of a natural herbivore. Parasitology. 140:632-640.
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2013.
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2016.
Delivery of macromolecules to plant parasitic nematodes using a tobacco rattle virus vector. Plant Biotechnology Journal. 5:827-834. Abstract
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2007.
Soil strength and macropore volume limit root elongation rates in many UK agricultural soils. Annals of Botany. 110:259-270.
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2012.
Directional trends in species composition over time can lead to a widespread overemphasis of year-to-year asynchrony. Journal of Vegetation Science. 31:792-802.
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2020.
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2012.
Phenolic compounds in blackcurrant (Ribes nigrum L.) leaves relative to leaf position and harvest date. Food Chemistry. 172:135-142.
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2008.
Phenolic compounds in blackcurrant (Ribes nigrum L.) leaves relative to leaf position and harvest date. Food Chemistry. 172:135-142.
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2015.
Exploring cyanobacterial mutualisms. Annual Review of Ecology Evolution and Systematics. 38:255-273. Abstract
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2007.
Understanding biological diversity in soil: the UK's Soil Biodiversity Research Programme. Applied Soil Ecology. 33(2):101-113.
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2006.
Simulating the actions of commuters using a multi-agent system. Journal of Artificial Societies and Social Simulation. 22:ArticleNo.10.
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2019.
Private woodland owners' perspectives on multifunctionality in English woodlands. Journal of Rural Studies. 28:95-106.
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2012.
Private ownership and public good provision in English woodlands. Small Scale Forestry, Published online. 9
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2009.
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2007.
Are stated preferences convergent with revealed preferences? Empirical evidence from Nigeria Ecological Economics. 59(1):24-37.
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2006.
Socio-economic and bio-physical modelling of diffuse pollution: closing the gaps. Archiv fur Hydrobiologie. Large Rivers Supplement. 17:175-199.
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2006.
Cost-effectiveness analysis and the implementation of the WFD: review of available approaches and the role of model benchmarking. Archiv fur Hydrobiology: Large Rivers Supplement. 17:201-219.
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2006.
Participatory environmental education and WTP for river basin management: empirical evidence from Nigeria. Land Economics. 82(4):542-561.
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2006.
The Weaklaw Vent, SE Scotland: Metasomatism of eruptive products by carbo-hydro-fluids of probable mantle origin. Mineralogical Magazine. 83:855-867.
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2019.
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2011.
Reliable quantification of N-2 fixation by non-legumes remains problematic. Nutrient Cycling in Agroecosystems. Published online..
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2020.
Differential effect of arbuscular mycorrhizal fungal communities from ecosystems along management gradient on the growth of forest understorey plant species. Soil Biology & Biochemistry. 41:2141-2146.
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2009.
The contribution of aeolian material to an Aridisol from southern Jordan as revealed by the mineralogical analysis. Journal of Arid Environments. 72(8):1431-1447.
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2008.
Occurrence of resistance-breaking populations of root-knot nematodes on tomato in Greece. European Journal of Plant Pathology. 113:101-105. Abstract
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2005.
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2005.
Differentiation in two populations of Meloidogyne incognita from Greece in relation to reproduction on resistant tomato and pepper. Journal of Plant Diseases and Protection. 114:276-277. Abstract
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2007.
Rapid defense responses in maize leaves induced by Spodoptera exigua caterpillar feeding. Journal of Experimental Botany. 68:4709-4723.
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2017.
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2012.
Strategies for monitoring and managing mass populations of toxic cyanobacteria in recreational waters: A multi-interdisciplinary approach. Environmental Health. 8 Supplement 1:-S11.
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2009.
Population resequencing reveals local adaptation of Arabidopsis lyrata to serpentine soils. Nature Genetics. 42:260-U42.
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2010.
Evidence for residence-induced enhancement of aggressiveness in the non-territorial pig. Applied Animal Behaviour Science. 130:10-19.
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2011.
The plant microbiome. Genome Biology. 14:209.
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2013.
Measuring chronic social tension in groups of growing pigs using inter-individual distances. Applied Animal Behaviour Science. 146:26-36.
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2013.
RXLR effector AVR2 up-regulates a brassinosteroid responsive bHLH transcription factor to suppress immunity. Plant Physiology. 174:356-369.
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2017.
Fats and function: protein lipid modifications in plant cell signalling. Current Opinion in Plant Biology. 40:63-70.
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2017.
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2020.
A proposal for classification of non-urban regions in the European Union. Cuadernos Geograficos. 55:92-124.
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2016.
Multivariate analysis of protein profiles of metal hyperaccumulator Thlaspi caerulescens accessions. Proteomics. 6:3696-3706. Abstract
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2006.
Biogas appliances in Sub-Sahara Africa. Biomass and Bioenergy. 70:40-50.
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2014.
Exploring the role of cell wall-related genes and polysaccharides during plant development. Plants-BASEL. 7:ArticleNo.42.
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2018.
Antioxidant rich potato improves arterial stiffness in healthy adults. Plant Foods for Human Nutrition. 73:203-208.
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2018.
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2016.
Thermal time - concepts and utility. Annals of Applied Biology. 146:1-14. Abstract
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2005.
Dynamics and management of the white potato cyst nematode Globodera pallida in commercial potato crops. Annals of Applied Biology. 164:18-34.
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2014.
Fat storage influences fasting endurance more than body size in an ungulate. Functional Ecology. 35:1470-1480.
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2021.
Determinants of heart rate in Svalbard reindeer reveal mechanisms of seasonal energy management. Philosophical Transactions of the Royal Society B. 376:ArticleNo20200215.
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2021.
Assessing the sustainability of renewable energy technologies using multi-criteria analysis: Suitability of approach for national-scale assessments and associated uncertainties. Renewable and Sustainable Energy Reviews. 39:1173-1184.
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2014.
Probabilistic modelling of the inherent fieldlevel pesticide pollution risk in a small drinking water catchment using spatial Bayesian belief networks. Hydrology and Earth Systems Science. 26:1261-1293.
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2022.
Application of Bayesian Belief Networks to quantify and map areas at risk to soil threats: using soil compaction as an example. Soil Tillage and Research. 132:56-68.
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2013.
Uncertainty evaluation of mass discharge estimates from a contaminated site using a fully Bayesian framework. Water Resources Research. 46(W12552)
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2010.
A risk-based approach for developing standards for irrigation with reclaimed water. Water Research. 126:372-384.
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2017.
Application of Bayesian geostatistics for evaluation of mass discharge uncertainty at contaminated sites. Water Resources Research. 48
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2012.
Interactions between fungal community structure, litter decomposition and depth of water-table in a cutover peatland. FEMS Microbiology Ecology. 64(3):433-448.
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2008.
Litter type, but not plant cover, regulates initial litter decomposition and fungal community structure in recolonising cutover peatlands. Soil Biology and Biochemistry. 41(3):651-655.
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2009.
Dynamic trajectories of growth and nitrogen capture by competing plants. New Phytologist. 193:948-958.
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2012.
Temporal patterns of litter production by vascular plants colonising cut-over peatlands. Wetlands. 28(1):245-250.
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2008.
Plant ecology's guilty little secret: understanding the dynamics of plant competition. Functional Ecology. 27:918-929.
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2013.
Directly quantifying multiple interacting influences on plant competition. Plant Cell and Environment. 44:1268-1277.
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2021.