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Melo P, Graham DJ, Levinson D, Aarabi S.  2016.  Agglomeration, accessibility, and productivity: evidence for urbanized areas in the US. Urban Studies, Published online..
Prager K.  2015.  Agri-environmental collaboratives as bridging organisations in landscape management. Journal of Environmental Management. 161:375-384.
Prager K.  2015.  Agri-environmental collaboratives for landscape management in Europe. Current Opinion in Environmental Sustainability. 12:59-66.
Sutherland LA, Toma L, Barnes AP, Matthews KB, Hopkins J.  2016.  Agri-environmental diversification:linking environmental, forestry and renewable energy engagement on Scottish farms. Journal of Rural Studies. 47:10-20.
Xiang Q, Zhu D, Giles M, Neilson R, Yang XR, Qiao M, Chen QL.  2020.  Agricultural activities affect the pattern of the resistome within the phyllosphere microbiome in peri-urban environments. Journal of Hazardous Materials. 382:ArticleNo.121068.
Andersen MN, Sausse C, Lacroix B, Caul S, Mess A.  2007.  Agricultural studies of GM maize and the field experimental infrastructure of ECOGEN. Pedobiologia. 51:175-184. Abstract
Sutherland LA.  2019.  Agriculture and inequalities: Gentrification in a Scottish parish. Journal of Rural Studies. 68:240-250.
McCouch S, Baute GJ, Bradeen J, Bramel P, Bretting PK, Buckler E, Burke JM, Charest D, Cloutier S, Cole G et al..  2013.  Agriculture: Feeding the future. Nature. 499:23-24.
Flanigan S, Blackstock KL, Hunter C.  2014.  Agritourism from the perspective of providers and visitors: a typology-based investigation. Tourism Management. 40:405.
Subedi M, Hocking TJ, Fullen MA, McCrea AR, Milne E.  2010.  Agro-environmental project duration and effectiveness in South-East Asia. Outlook on Agriculture. 39(2):107-113.
Harding AE, Rivington M, Mineter MJ, Tett SFB.  2015.  Agro-meteorological indices and climate model uncertainty over the UK. Climatic Change. 128:113-126.
Rivington M, Bellocchi G, Matthews KB, Buchan K, Miller DG.  2008.  Agro-meteorological metrics for communicating climate change impacts to land managers. Aspects of Applied Biology. 88:85-91.
Ducreux LJM, Morris WL, Taylor MA, Millam S.  2005.  Agrobacterium-mediated transformation of Solanum phureja. Plant Cell Reports. 24:10-14. Abstract
Thirugnanasambandam A, Wright KM, Havis ND, Whisson SC, Newton AC.  2011.  Agrobacterium-mediated transformation of the barley pathogen Ramularia collo-cygni with fluorescent marker tags and live tissue imaging of infection development. Plant Pathology. 60:929-937.
Silva VM, Boleta EHM, Martins JT, dos Santos FLM, da Rocha Silva AC, Alcock TD, Wilson L, de Sá ME, Young SD, Broadley MR et al..  2019.  Agronomic biofortification of cowpea with selenium: effects of selenate and selenite application on selenium and phytate concentrations in seeds. Journal of the Science of Food and Agriculture. 99:5969-5983.
Chappell A, Scott KP, Griffiths IA, Cowan AA, Hawes C, Wishart J, Martin P.  2017.  The agronomic performance and nutritional content of oat and barley varieties grown in a northern maritime environment depends on variety and growing conditions. Journal of Cereal Science. 74:1-10.
Knierim A, Boenning K, Caggiano M, Cristóvão A, Dirimanova V, Koehnen T, Labarthe P, Prager K.  2015.  The AKIS concept and its relevance in selected EU member states. Outlook on Agriculture.
Jouet A, Saunders DGO, McMullan M, Ward B, Furzer O, Jupe F, Cevik V, Hein I, Thilliez GJA, Holub E et al..  In Press.  Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytologist. Published online..
Jouet A, Saunders DGO, McMullan M, Ward B, Furzer O, Jupe F, Cevik V, Hein I, Thilliez GJA, Holub E et al..  2019.  Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytologist. 221:1529-1543.
Jia Y, Burbidge C, Sweetman C, Schultz E, Soole E, Jenkins C, Hancock RD, Bruning JB, Ford CM.  2019.  An aldo-keto reductase with 2-keto-l-gulonate reductase activity functions in l-tartaric acid biosynthesis from vitamin C in Vitis vinifera. Journal of Biological Chemistry. 294:15932-15946.
Raven JA, Giordano M.  2014.  Algae. Current Biology. 24:R590-R595.
Wells ML, Potin P, Craigie JS, Raven JA, Merchant SS, Helliwell KE, Smith AG, Camire ME, Brawley SH.  2017.  Algae as nutritional and functional food sources: revisiting our understanding. Journal of Applied Phycology. 29:949-982.
Lichner L, Hallett PD, Drongova Z, Czachor H, Kovacik L, Mataix-Solera J, Homolak M.  2013.  Algae influence the hydrophysical parameters of a sandy soil. Catena. 108:58-68.
Raven JA, Ball LA, Beardall J, Giordano M, Maberly SC.  2005.  Algae lacking carbon concentrating mechanisms. Canadian Journal of Botany. 83:879-890.
Raven JA, Giordano M, Beardall J, Maberly SC.  2011.  Algal and aquatic plant carbon concentrating mechanisms in relation to environmental change. Photosynthesis Research. 109:281-296.
Raven JA, Giordano M, Beardall J, Maberly SC.  2012.  Algal evolution in relation to atmospheric CO2: carboxylases, carbon-concentrating mechanisms and carbon oxidation cycles. Philosophical Transactions of the Royal Society, B. 367:493-507.
Brodie J, Chan CX, De Clerck O, Cock JM, Coelho SM, Gachon C, Grossman AR, Mock T, Raven JA, Smith AG et al..  2017.  The algal revolution. Trends in Plant Science. 22:726-738.
Dupuy LX, Vignes M.  2012.  An algorithm for the simulation of the growth of root systems on deformable domains. Journal of Theoretical Biology. 310:164-174.
Glasbey CA, van der Heijden GWAM.  2007.  Alignment and sub-pixel interpolation of images using Fourier methods. Journal of Applied Statistics. 34:217-230. Abstract
Pritchard L, Holden NJ, Bielaszewska M, Karch H, Toth IK.  2012.  Alignment-free design of highly discriminatory diagnostic primer sets for Escherichia coli O104:H4 outbreak strains. PLoS ONE. 7:e34498.
Schlesinger D, Rikanati RD, Volis S, Faigenboim A, Vendramin V, Cattonaro F, Hooper M, Oren E, Taylor M, Sitrit Y et al..  2019.  Alkaloid chemodiversity in Mandragora spp. is associated with loss-of-functionality of MoH6H, a hyoscyamine 6 beta-hydroxylase gene. Plant Science. 283:301-310.
Speck JJ, James EK, Sugawara M, Sadowsky MJ, Gyaneshwar P.  2019.  An alkane sulfonate monooxygenase is required for symbiotic nitrogen fixation by Bradyrhizobium diazefficiens (syn. Bradyrhizobium japonicum) USDA110(T). Applied and Environmental Microbiology. 85:ArticleNo.e01552-19.
Spies A, Korzun V, Bayles R, Rajaraman J, Himmelback A, Hedley PE, Schweizer P.  2012.  Allele mining in barley genetic resources reveals genes of race-non-specific powdery mildew resistance. Frontiers in Plant Science. 2:113.
Spies A, Korzun V, Bayles R, Rajaraman J, Hedley PE, Schweizer P.  2011.  Allele mining in barley genetic resources reveals genes of race-nonspecific powdery mildew resistance. Frontiers in Plant Science: Plant Nutrition. 2:e113.
Dzidzienyo DK, Bryan GJ, Wilde G, Robbins TP.  2016.  Allelic diversity of S-RNase alleles in diploid potato species. Theoretical and Applied Genetics. 129:1985-2001.
Henderson IR, Liu F, Drea SO, Simpson GG, Dean C.  2005.  An allelic series reveals essential roles for FY in plant development in addition to flowering-time control. Development. 132:3597-3607. Abstract
Tondelli A, Pagani D, Ghafoori IN, Rahimi M, Ataei R, Rizza F, Flavell AJ, Cattivelli L.  2014.  Allelic variation at Fr-H1/Vrn-H1 and Fr-H2 loci is the main determinant of frost tolerance in spring barley. Environmental and Experimental Botany. 106:148-155.
Gautrais J, Michelena P, Sibbald A, Deneubourg JL.  2007.  Allelomimetic synchronisation in merino sheep. Animal Behaviour. 74(5):1443-1454.
Beardall J, Allen D, Bragg J, Finkel ZV, Flynn KJ, Quigg A, Rees TAV, Richardson A, Raven JA.  2009.  Allometry and stoichiometry of unicellular, colonial and multicellular phytoplankton. New Phytologist. 181:295-309.
Phimister E, Roberts D.  2017.  Allowing for uncertainty in exogenous shocks to CGE models: the case of a new renewable energy sector. Economic Systems Research, Published online..
Phimister E, Roberts D.  2017.  Allowing for uncertainty in exogenous shocks to CGE models: the case of a new renewable energy sector. Economic Systems Research. 29:509-527.
Rodriguez-Gutierrez G, Duthie GG, Wood S, Morrice P, Nicol F, Reid M, Cantlay LL, Kelder T, Horgan GW, Fernandez-Bolanos Guzman J et al..  2012.  Alperujo extract, hydroxytyrosol, and 3,4-dihydroxyphenylglycol are bioavailable and have antioxidant properties in vitamin e-deficient ratsua proteomics and network analysis approach. Molecular Nutrition and Food Research. 56:1131-1147.
Butterfield BJ, Cavieres LA, Callaway RM, Cook BJ, Kikvidze Z, Lortie CJ, Michalet R, Pugnaire FI, Schoeb C, Xiao S et al..  2013.  Alpine cushion plants inhibit the loss of phylogenetic diversity in severe environments. Ecology Letters. 16:478-486.
Saison C, Degrange V, Oliver R, Millard P, Commeaux C, Montange D, LeRoux X.  2006.  Alteration and resilience of the soil microbial community following compost amendment: effects of compost level and compost-borne microbial community. Environmental Microbiology. 8(2):247-257.
Humberto A, Wence H, Cameron C, Black HIB, Meier S, Paolini J, Tapia Y, Cornejo P.  2020.  Alteration of enzyme activities and functional diversity of a soil contaminated with copper and arsenic. Ecotoxicology and Environmental Safety. 192:ArticleNo.110264.
Bahar B, Monahan FJ, Moloney AP, O'Kiely P, Scrimgeour CM, Schmidt O.  2005.  Alteration of the carbon and nitrogen stable isotope composition of beef by substitution of grass silage with maize silage. Rapid Communications in Mass Spectrometry. 19:1937-1942. Abstract
Kr E, Tups A, Archer ZA, Ross AW, Moar KM, Bell LM, Duncan JS, Mayer CD, Morgan PJ, Mercer JG et al..  2007.  Altered expression of SOCS3 in the hypothalamic arcuate nucleus during seasonal body mass changes in the field vole, Microtus agrestis. Journal of Neuroendocrinology. 19:83-94. Abstract
Paterson E, Neilson R, Midwood AJ, Osborne SM, Sim A, Thornton B, Millard P.  2011.  Altered food web structure and C-flux pathways associated with mineralisation of organic amendments to agricultural soil. Applied Soil Ecology. 48:107-116.
Kalyna M, Simpson CG, Syed NH, Lewandowska D, Marquez Y, Kusenda B, Marshall J, Fuller J, Cardle L, McNicol JW et al..  2012.  Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis. Nucleic Acids Research. 40:2454-2469.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.