Publications list
Post-transcriptional regulation FLOWERING LOCUS T modulates heat-dependent source-sink development in potato. Current Biology. 29:1614-1624.
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2019.
Post-translational modifications in priming the plant immune system: ripe for exploitation? FEBS Letters. 592:1929-1936.
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2018.
Posterior-based proposals for speeding up Markov chain Monte Carlo. Royal Society Open Science. 6:ArticleNo.190619.
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2019.
Postprandial cell defense system responses to meal formulations: Stratification through gene expression profiling. Molecular Nutrition and Food Research. 58:2066-2079.
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2014.
Potash fertilizer promotes incipient salinization in groundwater irrigated semi-arid agriculture. Scientific Reports. 10:ArticleNo.3691.
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2020.
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2007.
Potassium release and fixation as a function of fertilizer application rate and soil parent material. Geoderma. 140(1-2):188-198.
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2007.
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2009.
Potato glycosterol rhamnosyltransferase, the terminal step in triose side-chain biosynthesis. Phytochemistry. 68:327-334. Abstract
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2007.
Potato late blight field resistance from QTL dPI09c is conferred by the NB-LRR gene R8. Journal of Experimental Botany. 69:1545-1555.
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2018.
The potato MAP3K StVIK is required for Phytophthora infestans RXLR effector Pi17316 to promote disease. Plant Physiology. 177:398-410.
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2018.
Potato metabolomics by GC-MS: what are the limiting factors? Metabolomics. 3:475-488. Abstract
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2007.
Potato mop-top virus co-opts the stress sensor HIPP26 for long-distance movement. Plant Physiology. 176:2052-2070.
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2018.
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2012.
Potato NPH3/RPT2-like protein StNRL1, targeted by a phytophthora infestans RXLR effector, is a susceptibility factor. Plant Physiology. 171:645-657.
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2016.
Potato tuber pectin structure is influenced by pectin methyl esterase activity and impacts on cooked potato texture. Journal of Experimental Botany. 62:371-381.
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2011.
Potato virus Y HCPro localization at distinct, dynamically related and environment-influenced structures in the cell cytoplasm. Molecular Plant-Microbe Interactions. 27:1331-1343.
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2014.
Potential and realised contribution of endozoochory to seedling establishments. Basic and Applied Ecology. 10(7):656-661.
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2009.
Potential carbon loss from Scottish peatlands under climate change. Regional Environmental Change. 19:2101-2111.
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2019.
The potential effect of low cell osmolarity on cell function through decreased concentration of enzyme substrates. Journal of Experimental Botany. 69:4667-4673.
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2018.
Potential environment and public health risk due to contamination of heavy metals from industrial waste water in Lam Thao, Phu Tho, Vietnam. American Journal of Environmental Sciences. 8:71-78.
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2012.
The potential for modelling peatland habitat condition in Scotland using long-term MODIS data. Science of the Total Environment. 660:429-442.
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2019.
Potential for pathogen reduction in anaerobic digestion and biogas generation in Sub-Saharan Africa. Biomass and Bioenergy. 70:112-124.
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2014.
The potential for polyphosphate metabolism in Archaea and anaerobic polyphosphate formation in Methanosarcina mazei. Scientific Reports. 9:ArticleNo.17101.
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2019.
The potential for Scottish cultivated top soils to lose or gain soil organic carbon. Soil Use and Management. 29:39-47.
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2013.
The potential for small-scale biogas digesters in Sub-Saharan Africa to improve sustainable rural livelihoods. Biomass and Bioenergy. 70:1-3.
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2014.
The potential for use of gastropod molluscs as bioindicators of endocrine disrupting compounds in the terrestrial environment. Journal of Environmental Monitoring. 11(3):491-497.
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2009.
Potential for using remote sensing to estimate carbon fluxes across Northern peatlands. Science of the Total Environment. 615:857-874.
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2018.
A potential habitat network for the Eurasian lynx Lynx lynx in Scotland. Mammal Review. 38(3):285-303.
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2008.
Potential impacts of climate change on the threat of potato cyst nematode species in Great Britain. Plant Pathology. Published online..
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2018.
Potential impacts of climate change on the threat of potato cyst nematode species in Great Britain. Plant Pathology. 67:909-919.
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2018.
Potential impacts of the loss of Fraxinus excelsior due to ash dieback on woodland vegetation in Great Britain. New Journal of Botany, Published online.. 6
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2016.
A potential loss of carbon associated with greater plant growth in the European Arctic. Nature Climate Change. 2:875-879.
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2012.
The potential of chlorhexidine lavage to reduce the shedding of VTEC 0157 from cattle. Cattle Practice. 22:280-280.
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2014.
Potential of Fava Bean as future protein supply to partially replace meat intake in the human diet. Comprehensive Reviews in Food Science and Safety. 14:511-522.
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2015.
Potential of multi-objective models for risk-based mapping of the resilience characteristics of soils: demonstration at a national level. Soil Use and Management. 25:66-77.
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2009.
Potential of multi-objective models for risk-based mapping of the resilience characteristics of soils: demonstration at a national level. Soil Use and Management. 25(1):66-77.
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2008.
The potential of runoff attenuation features as a Natural Flood Management approach. Journal of Flood Risk Management.. 13:ArticleNo.e12565.
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2020.
Potential of thermal imaging in soil bioengineering to assess plant ability for soil water removal and air cooling. Ecological Engineering. 141:ArticleNo.105599.
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2019.
Potential pitfalls in the quantitative molecular detection of escherichia coli O157:H7 in environmental matrices. Canadian Journal of Microbiology. 52(5):482-488.
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2006.
Potential tracers for tracking septic tank effluent discharges in watercourses. Environmental Pollution. 228:245-255.
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2017.
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2014.
The potential use of natural vs commercial biosorbent material to remediate stream waters by removing heavy metal contaminants. Journal of Environmental Management. 231:275-281.
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2019.
Potential yield challenges to scale-up of zero budget natural farming. Nature Sustainability. 3:247-252.
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2020.
Potentials and pitfalls in the analysis of bipartite networks to understand plant-microbe interactions in changing environments. Functional Ecology.. 33:107-117.
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2019.
Powdery scab resistance in Solanum tuberosum: an assessment of cultivar x environment effect. Plant Pathology. 61:29-36.
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2012.
powdR: An R package for quantitative mineralogy using full pattern summation of X-ray powder diffraction data. Computers and Geosciences. 147:ArticleNo.104662.
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2021.
Power calculations for monitoring studies: a case study with alternative models for random variation. Environmetrics. 22:618-625.
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2011.
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2007.
A practical method using a network of fixed infrared sensors for estimating crop canopy conductance and evaporation rate. Biosystems Engineering. 165:59-69.
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2018.
A pragmatic methodology for horizon scanning of water quality linked to future climate and land use scenarios. Land Use Policy. 44:131-144.
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2015.
Pre-treatment of soil X-ray powder diffraction data for cluster analysis. Geoderma. 337:413-424.
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2019.
Preceding crop and weed management history affect denitrification and denitrifier community structure throughout the development of durum wheat. Agriculture, Ecosystems and Environment. 212:49-63.
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2015.
Predicting a change in the order of spring phenology in temperate forests. Global Change Biology. 21:2603-2611.
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2015.
Predicting alcohol yield from UK soft winter wheat for grain distilling: combined influence of hardness and nitrogen measurements. Journal of the Institute of Brewing. 115:183-190.
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2009.
Predicting dates of head initiation and yields of broccoli crops grown throughout Scotland. European Journal of Agronomy. 116:ArticleNo.126055..
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2020.
Predicting impacts of climate change on Fasciola hepatica risk. PLoS ONE. 6:e16126.
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2011.
Predicting land cover using GIS, Bayesian and evolutionary algorithm methods. Journal of Environmental Management.. 90:236-250.
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2008.
Predicting penetrometer resistance from the compression characteristic of soil. Soil Science Society of America Journal. 76:361-369.
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2012.
Predicting sample source location from soil analysis using neural networks. Environmental Forensics. 15:281-292.
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2014.
Predicting Scottish topsoil organic matter content from colour and environmental factors. European Journal of Soil Science. 66:112-120.
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2015.
Predicting soil chemical composition and other soil parameters from field observations using a neural network. Computers and Electronics in Agriculture. 82:108-116.
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2012.
Predicting the effects of body fatness on food intake and performance of sheep. British Journal of Nutrition. 97(6):1206-1215.
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2007.
Predicting the severity of the grass pollen season and the effect of climate change in Northwest Europe. Science Advances. 7:ArticleNo.eabd7658.
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2021.
Predicting the water retention characteristics of UK soils. European Journal of Soil Science. 66:239-252.
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2015.
Prediction of soil characteristics and colour using data from the National Soils Inventory of Scotland. Geoderma. 200-201:99-107.
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2013.
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2021.
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2012.
The PREDICTS database: a global database of how local terrestrial biodiversity responds to human impacts. Ecology and Evolution. 4:4701-4735.
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2014.
Preface. Mathematical Modelling of Natural Phenoma. 8:1-4.
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2013.
Preface to the thematic issue on modelling systemic change in coupled socio-environmental systems. Environmental Modelling and Software. 75:317.
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2016.
Preface: Future roots of productivity. Journal of Experimental Botany. 64:1179.
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2013.
Preferences for coastal and marine conservation in Vietnam: accounting for differences in individual choice set formation. Ecological Economics. 180:ArticleNo.106885.
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2021.
Preferences of sheep and goats for straw pellets treated with different food-flavouring agents. Small Ruminant Research. 63(1-2):50-57.
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2006.
Preferred orientation of mineral grains in sample mounts for quantitative XRD measurements: How random are powder samples? Clays and Clay Minerals. 56(4):404-415.
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2008.
Pregnant ewes exposed to multiple endocrine disrupting pollutants through sewage sludge-fertilised pasture show an anti-estrogenic effect in their trabecular bone. The Science of the Total Environment. 408:2340-2346.
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2010.
Preharvest application of exogenous abscisic acid (ABA) or an ABA analogue does not affect endogenous ABA concentration of onion bulbs. Plant Growth Regulation. 52:117-129. Abstract
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2007.
Preparing interdisciplinary leadership for a sustainable future. Sustainability Science..
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2020.
Prepubertal gonadotropin-releasing hormone analog leads to exagerrated behavioral and emotional sex differences in sheep. Hormones and Behavior. 59:22-27.
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2011.
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2015.
The presence of sheep leads to increases in plant diversity and reductions in the impact of deer on heather. Journal of Applied Ecology. 48:1269-1277.
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2011.
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2011.
The present is the key to the past, but what does the future hold for the recovery of surface waters from acidification? Water Research. 44(10):3166-3180.
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2010.
Present opportunities for sustainable and multifunctional forest management for the development of rural areas. L’Italia Forestale e Montana. 67:147-160.
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2012.
Pretreatment is an important method for increasing the conversion efficiency of rice straw by black soldier fly larvae based on the function of gut microorganisms. Science of the Total Environment. 762:ArticleNo.144118.
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2021.
Prevalence and diversity of Escherichia coli isolated from a barley trial supplemented with bulky organic soil amendments: green compost and bovine slurry. Letters in Applied Microbiology. 58:205-212.
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2014.
Prevalence and survival of potential pathogens in source segregated green waste compost. Science of the Total Environment. 431:128-138.
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2012.
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2012.
The prevalence of bovine viral diarrhoea virus infection in beef suckler herds in Scotland. Veterinary Journal. 186:226-231.
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2010.
Prevalence of Escherichia coli O157: H7 and serogroups O26, O103, O111 and O145 in sheep presented for slaughter in Scotland. Journal of Medical Microbiology. 60:653-660.
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2011.
Prevalence of Pasteurella multocida and other respiratory pathogens in the nasal tract of Scottish calves. Veterinary Record. 167:555-560.
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2010.
Prevalence, spatial distribution and the effect of control measures on louping-ill virus in the Forest of Bowland, Lancashire. Epidemiology and Infection. 135:963-973. Abstract
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2007.
The price of protection: a defensive endosymbiont impairs nymph growth in the bird cherry-oat aphid, Rhopalosiphum padi. Insect Science. Published online..
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2019.
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2020.
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2009.
The primary in vivo steroidal alkaloid glucosyltransferase from potato. Phytochemistry. 67:1590-1597. Abstract
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2006.
Priming of soil organic matter mineralisation is intrinsically insensitive to temperature. Soil Biology and Biochemistry. 66:20-28.
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2013.
Principal component analysis in the spectral analysis of the dynamic laser speckle patterns. Journal of the European Optical Society - Rapid Publications. 9:ArticleNo.14009.
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2014.
Prior host feeding experience influences ovipositional but not feeding preference in a polyphagous insect herbivore. Entomologia Experimentalis et Applicata. 138:137-145.
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2011.
Priorities for research in soil ecology. Pedobiologia. 63:1-7.
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2017.
Prioritising invasive species control actions: evaluating effectiveness, costs, willingness to pay and social acceptance. Ecological Economics. 152:1-8.
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2018.
Private ownership and public good provision in English woodlands. Small Scale Forestry, Published online. 9
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2009.
Private woodland owners' perspectives on multifunctionality in English woodlands. Journal of Rural Studies. 28:95-106.
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2012.
A probabilistic approach to river network detection in digital elevation models. Catena. 87:341-350.
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2011.
Probabilistic approach to the identification of input variables to estimate hydraulic conductivity. Soil Science Society of America Journal. 72(1):16-24.
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2008.
Probabilistic modelling of the inherent fieldlevel pesticide pollution risk in a small drinking water catchment using spatial Bayesian belief networks. Hydrology and Earth Systems Science. 26:1261-1293.
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2022.
Probabilistic multilocus haplotype reconstruction in outcrossing tetraploids. Genetics. 203:119-131.
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2016.
Probing free radical processes during storage of extracts from whole roasted coffee beans: impact of O-2 exposure during extraction and storage. Journal of Agricultural and Food Chemistry. 61:3301-3305.
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2013.
Probing soil physical and biological resilience data from a broad sampling of arable farms in Scotland. Soil Use and Management. 31:491-503.
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2015.
Problems of farm succession in the post-Soviet space: insights from the Republic of Moldova. Journal of Land Use Science. 13:631-644.
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2019.
Process for benchmarking models: dialogue between water managers and modellers. Archiv fur Hydrologie, Large Rivers Supplement. 17(1-2):3-21.
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2006.
Process-based principles for restoring river ecosystems. BioScience. 60(3):209-222.
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2010.
Processing of 13C-labelled diatoms by a bathyal community at sub-zero temperatures. Marine Ecology Progress Series. 421:39-50.
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2011.
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2012.
Product stability and sequestration mechanisms in Solanum tuberosum engineered to biosynthesize high value ketocarotenoids. Plant Biotechnology Journal. 14:140-152.
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2016.
Production and properties of monoclonal antibodies to Solanum nodiflorum mottle sobemovirus. Annals of Applied Biology. 146:321-325. Abstract
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2005.
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2020.
Profiling and quantification of regioisomeric caffeoyl glucoses in berry fruits. Journal of Agricultural and Food Chemistry. 66:1096-1104.
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2018.
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2014.
Profiling of phenols in human faecal water after raspberry supplementation. Journal of Agricultural and Food Chemistry. 58:10389-10395.
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2010.
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2009.
Progress in model-to-model analysis. Journal of Artificial Societies and Social Simulation. 11(2):8.
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2008.
Progress in understanding the mechanisms and functional importance of protein-membrane interactions in plants. New Phytologist. 204:741-743.
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2014.
Projecting the effect of crop yield increases, dietary change and different price scenarios on land use under two different state security regimes. International Journal of Agricultural Sustainability. 19:288-304.
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2021.
Projections of changes in grassland soil organic carbon under climate change are relatively insensitive to methods of model initialization. European Journal of Soil Science. 64:229-238.
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2013.
The promise of wilderness between paradise and hell: a cultural-historical exploration of a Dutch National Park. Landscape Research. 37:239-256.
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2012.
Promoting microbial immobilization of soil nitrogen during restoration of abandoned agricultural fields by organic additions. Biology and Fertility of Soils. 43:823-828.
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2007.
Pronounced long-term trends in year-round diet composition of the European shag Phalacrocorax aristotelis (Correction: vol 165, 188, 2018). Marine Biology. 166:ArticleNo.40..
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2019.
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2007.
A proposal for classification of non-urban regions in the European Union. Cuadernos Geograficos. 55:92-124.
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2016.
The pros and cons of ITS-based phylogenetic analysis for the genus Phytophthora: current status and future vision. Phytopathology. 96:S134-S134.
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2006.
Prospects and challenges for urban application of biogas installations in Sub-Saharan Africa. Biomass and Bioenergy. 70:130-140.
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2014.
Prospects for payments for ecosystem services in the Brazilian Pantanal: a scenario analysis. The Journal of Environment and Development. 24:26-53.
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2015.
Prospects for plant defence activatiors and biocontrol in IPM - concpets and lessons learnt so far. Crop Protection. 97:128-134.
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2017.
Protected area networks and savannah bird biodiversity in the face of climate change and land degradation. Ecology Letters. 16:1061-1068.
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2013.
Protected raspberry production accelerates onset of oviposition by vine weevils (Otiorhynchus sulcatus). Agricultural and Forest Entomology. 12:277-283.
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2010.
Protected raspberry production alters aphid-plant interactions but not aphid population size. Agricultural and Forest Entomology. 14:217-224.
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2012.
Protecting and restoring Europe’s waters: an analysis of the future development needs of the Water Framework Directive. Science of Total Environment. 658:1228-1238.
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2019.
Protection of ewes against Teladorsagia circumcincta infection in the periparturient period by vaccination with recombinant antigens. Veterinary Parasitology. 228:130-136.
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2016.
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2016.
Protein assemblages and tight curves in the plasma membranes of photosynthetic eukaryotes. Journal of Plant Physiology. 256:ArticleNo.153330.
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2021.
Protein elemental sparing and codon usage bias are correlated among bacteria. Molecular Ecology. 21:2480-2487.
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2012.
Protein energy malnutrition during early gestation in sheep blunts fetal renal vascular and nephron development and compromises adult renal function. Journal of Physiology. 590:377-393.
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2012.
Protein turnover and plant RNA and phosphorus requirements in relation to nitrogen fixation. Plant Science. 188-189:25-35.
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2012.
Proteome-determined type-specific proteins of Mycobacterium avium subspecies paratuberculosis. Veterinary Microbiology. 158:153-162.
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2012.
Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. Molecular Biology of the Cell. 16:260-269.
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2005.
Proteomic analysis of the potato tuber life cycle. Proteomics. 6:6042-6052. Abstract
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2006.
A proteomic and targeted metabolomic approach to investigate change in Lolium perenne roots when challenged with glycine. Journal of Experimental Botany. 58(7):1581-1590.
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2007.
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2007.
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2014.
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2006.
A prototype cloud-based reproducible data analysis and visualization platform for outputs of agent-based models. Environmental Modelling and Software. 96:172-180.
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2017.
Protracted treatment with corticosterone reduces breeding success in a long-lived bird. General and Comparative Endocrinology. 210:38-45.
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2015.
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2019.
The pseudogenes of barley. The Plant Journal. 93:502-514.
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2018.
The pseudogenes of barley. Plant Journal. 93:502-514.
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2018.
Psoroptes ovis-Early Immunoreactive Protein (Pso-EIP-1) a novel diagnostic antigen for sheep scab. Parasite Immunology, Article No. e12788. Published online..
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2020.
Public and professional views on invasive non-native species - a qualitative social scientific investigation. Biological Conservation. 144:3089-3097.
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2011.
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2014.
Public attitudes and participation in wind turbine development. Journal of Environmental Assessment Policy and Management. 11(1):69-95.
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2009.
Public evaluation of landscape content and change: Several examples from Europe. Land Use Policy. 26:77-86.
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2008.
Public participation for planning the sustainable use of natural resources and landscape changes. International Journal of Interdisciplinary Social Sciences. 5:303-320.
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2011.
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2006.
Pushing boundaries in above-belowground interactions. Functional Ecology. 26:305-306.
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2012.
Putative household outbreaks of campylobacteriosis typically comprise single MLST genotypes. Epidemiology and Infection. 138:1744-1747.
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2010.
Putting community to use in environmental policy making: Emerging trends in Scotland and the UK. Geography Compass. 12:ArticleNo.e12381.
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2018.
Putting plant defences on the map: a test of the idea that plants are better defended at lower latitudes. New Phytologist. 191:777-788.
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2011.
Putting the eco back in ecotourism. Animal Conservation. 14:325-327.
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2011.
Putting transdisciplinarity into practice: a mixed mode procedure for stakeholder participation in natural resource management. Journal of Environmental Planning and Management. 58:1827-1852.
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2015.
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2013.
Pyromorphite formation in a fungal biofilm community growing on lead metal. Environmental Microbiology. 16:1441-1451.
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2014.
Q&A - John Raven. Current Biology. 15:R905-R906. Abstract
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2005.
QTL analysis of a cross between European and North American malting barleys reveals a putative candidate gene for . Molecular Breeding. 19:275-284. Abstract
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2007.
QTL dissection of floral traits in Streptocarpus(Gesneriaceae). Euphytica. 216:ArticleNo.110.
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2020.
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2015.
QTL for resistance to Globodera rostochiensis pathotype Ro2 and G. pallida pathotype Pa2/3 in autotetraploid potato. American Journal of Potato Research. 96:552-553.
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2019.
QTL mapping of yield, agronomic and quality traits in tetraploid potato (Solanum tuberosum subsp. tuberosum). Theoretical and Applied Genetics. 116:193-211. Abstract
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2008.
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2016.
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2014.
A qualitative multi-attribute model for assessing the impact of cropping systems on soil quality. Pedobiologia. 51:239-250. Abstract
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2007.
A qualitative multi-attribute model for economic and ecological assessment of genetically modified crops. Ecological Modelling. 215:247-261. Abstract
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2008.
Quantification and colonisation dynamics of Escherichia coli O157:H7 inoculation of microgreens species and plant growth substrates. International Journal of Food Microbiology. 273:1-10.
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2018.
Quantification of effects of season and nitrogen supply on tree belowground carbon transfer. New Phytologist. 187(2):485-493.
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2010.
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2006.
Quantification of the slug parasitic nematode Phasamarhabditis hermaphrodita from soil samples using real time qPCR. International Journal for Parasitology. 36:1453-1461. Abstract
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2006.
Quantifying and mitigating wind-induced undercatch in rainfall measurements. Water Resources Research. 54:3863-3875.
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2018.
Quantifying fish and mobile invertebrate production from a threatened nursery habitat. Journal of Applied Ecology. 53:596-606.
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2016.
Quantifying hydrological budgets and pathways in a small upland catchment using a combined modelling and tracer approach. Hydrological Processes. 20:349-368.
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2006.
Quantifying plant interactions: independent reference is critical for standardising the importance indices. Journal of Vegetation Science. 30:397-401.
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2019.
Quantifying potato pathogen DNA in soil. Applied Soil Ecology. 41:234-238.
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2009.
Quantifying preferences for the natural world using monetary and non-monetary assessments of value. Conservation Biology. 28:404-413.
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2014.
Quantifying public preferences for agri-environmental policy in Scotland: a comparison on methods. Ecological Economics. 63:42-53. Abstract
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2007.
Quantifying rhizosphere particle movement around mutant maize roots using time-lapse imaging and particle image velocimetry. European Journal of Soil Science. 61:926-939.
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2010.
Quantifying small-scale deforestation and forest degradation in African woodlands using radar imagery. Global Change Biology. 18:243-257.
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2012.
Quantifying soil displacement and tillage erosion rate by different tillage systems in dryland, northwestern Iran. Soil Use and Management. Published online..
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2018.
Quantifying soil displacement and tillage erosion rate by different tillage systems in dryland, northwestern Iran. Soil Use and Management. 34:48-59.
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2018.
Quantifying species composition in root mixtures using two methods: near-infrared reflectance spectroscopy and plant wax markers. New Phytologist. 170(3):631-638.
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2006.
Quantifying terrestrial carbon stocks: examining the spatial variation in two upland areas in the UK and a comparison to mapped estimates of soil carbon. Soil Use and Management. 25(3):320-332.
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2009.
Quantifying the contribution of soil organic matter turnover to forest soil respiration using natural abundance delta 13C. Soil Biology and Biochemistry. 42(6):935-943.
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2010.