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A
Aitkenhead-Peterson JA, Smart RP, Aitkenhead MJ, Cresser MS, McDowell WH.  2007.  Spatial and temporal variation of dissolved organic carbon export from gauged and ungauged watersheds of Dee Valley, Scotland: Effect of land cover and C:N. Water Resources Research article no. W05442.. 43(5)
Aitkenhead MJ, Coull MC, Towers W, Hudson G.  2013.  Prediction of soil characteristics and colour using data from the National Soils Inventory of Scotland. Geoderma. 200-201:99-107.
Aitkenhead MJ, Gaskin GJ, Lafouge N, Hawes C.  2017.  PHYLIS: A low-cost portable visible range spectrometer for soil and plants. Sensors. 17:ArticleNo.99.
Aitkenhead MJ, Donnelly D, Sutherland LA, Miller DG, Coull MC, Black HIJ.  2015.  Predicting Scottish topsoil organic matter content from colour and environmental factors. European Journal of Soil Science. 66:112-120.
Aitkenhead MJ, Coull MC.  2016.  Mapping soil carbon stocks across Scotland using a neural network model. Geoderma. 262:187-188.
Aitkenhead MJ, Aalders IH.  2008.  Predicting land cover using GIS, Bayesian and evolutionary algorithm methods. Journal of Environmental Management.. 90:236-250.
Aitkenhead MJ, Albanito F, Jones MB, Black HIJ.  2011.  Development and testing of a process-based soil model (MOSES) for ecosystem services. Ecological Modelling. 222:3795-3810.
Aitkenhead MJ, Black HIJ.  2018.  Exploring the impact of different input data types on soil variable estimation using the ICRAF-ISRIC global soil spectral database. Applied Spectroscopy. 72:188-198.
Aitkenhead MJ.  2017.  Mapping peat in Scotland with remote sensing and site characteristics. European Journal of Soil Science. 68:28-38.
Aitkenhead MJ, Coull MC.  2015.  Mapping soil carbon stocks across Scotland using a neural network model. Geoderma. 262:187-188.
Aitkenhead MJ, Coull MC.  2019.  Digital mapping of soil ecosystem services in Scotland using neural networks and fuzzy classification. Part 1: Mapping of soil classes. Soil Use and Management. 35:205-2016.
Aitkenhead MJ, Coull MC.  2019.  Digital mapping of soil ecosystem services in Scotland using neural networks and relationship modelling. Part 2: Mapping of soil ecosystem services. Soil Use and Management. 35:217-231.
Aitkenhead MJ, Rhind SM, Zhang ZL, Kyle CE, Coull MC.  2014.  Neural network integration of field observations for soil endocrine disruptor characterisation. Science of the Total Environment. 468-469:240-248.
Aitkenhead MJ, McDonald AJS.  2006.  The state of play in machine/environment interactions. Artificial Intelligence Review. 25:247-276.
Aitkenhead MJ, Aalders IH.  2011.  Automating land cover mapping of Scotland using expert system and knowledge integration methods. Remote Sensing of Environment. 115:1285-1295.
Aitkenhead MJ, Black HIJ.  2017.  EXPRESS: Exploring the impact of different input data types on soil variable estimation using the ICRAF-ISRIC global soil spectral database. Applied Spectroscopy. Published online..
Aitkenhead M, Cameron C, Gaskin G, Choisy B, Coull MC, Black HIJ.  2018.  Digital RGB photography and visible-range spectroscopy for soil composition analysis. Geodrma. 313:265-275.
Aitkenhead MJ.  2014.  SPOT-VEGETATION - 15 years of success: What's next? International Journal of Remote Sensing. 35:2397-2401.
Aitkenhead MJ, Owen M, Chambers DM.  2012.  Use of artificial neural networks in measuring characteristics of shielded radioactive plutonium for arms control. Journal of Analytical Atomic Spectrometry.. 27:432-439.
Aitkenhead MJ, Cooper RJ.  2008.  Neural network time series prediction of environmental variables in a small upland headwater in NE Scotland. Hydrological Processes. 22:3091-3101.
Aitkenhead MJ, Dyer R.  2007.  Improving land cover classification using recognition threshold neural networks. Photogrammetric Engineering and Remote Sensing. 73:413-421.
Aitkenhead M, Coull MC, Dawson LA.  2014.  Predicting sample source location from soil analysis using neural networks. Environmental Forensics. 15:281-292.
Aitkenhead MJ, Coull MC, Towers W, Hudson G, Black HIJ.  2012.  Predicting soil chemical composition and other soil parameters from field observations using a neural network. Computers and Electronics in Agriculture. 82:108-116.
Aitkenhead MJ, Aalders IH.  2008.  Classification of Landsat TM imagery for land cover using neural networks. International Journal of Remote Sensing. 29(7):2075.
Aitkenhead MJ.  2017.  Mapping peat in Scotland with remote sensing and site characteristics. European Journal of Soil Science. 68:28-38.
Aitkenhead MJ, Coull MC.  2019.  Mapping soil profile depth, bulk density and carbon stock in Scotland using remote sensing and spatial covariates. European Journal of Soil Science. 71:553-567.
Aitkenhead MJ, Aitkenhead-Peterson JA, McDowell W, Smart RP, Cresser M.  2007.  Modelling doc export from catchments in Scotland using neural networks. Computers and Geosciences. 33:423-436.
Ahmadi BV, Nath M, Hyslop JJ, Morgan CA, Stott AW.  2017.  Trade-offs between indicators of performance and sustainability in breeding suckler beef herds. Journal of Agricultural Science. 155:156-170.
Ahmad Z, Imran M, Qadeer S, Hussain S, Kausar R, Dawson LA, Khalid A.  2018.  Biosurfactants for sustainable soil management. Advances in Agronomy.. 150:81-130.
Aherne J, Helliwell RC, Lilly A, Ferrier RC, Jenkins A.  2007.  Simulation of soil and surface water acidification: Divergence between one-box and two-box models? Applied Geochemistry. Special Issue on Acid Rain2005, 7th International Conference on Acid Deposition, June 12-17th 2005, Prague, Czech Republic.. 22(6):1167-1173.
Aherne J, Futter MN, Dillon P.  2008.  The impacts of future climate change and dissolved organic carbon on acidification recovery at Plastic Lake, Ontario. Hydrology and Earth System Sciences. 12:383-392.
Agu RC, Swanston JS, Walker JW, Pearson SY, Bringhurst TA, Brosnan JM, Jack FR.  2009.  Predicting alcohol yield from UK soft winter wheat for grain distilling: combined influence of hardness and nitrogen measurements. Journal of the Institute of Brewing. 115:183-190.
Aflakpui GKS, Gregory PJ, Froud-Williams RJ.  2005.  Carbon (13C) and nitrogen (15N) translocation in a maize-Striga hermonthica association. Experimental Agriculture. 41:321-333. Abstract
Afkhami ME, Mahler DL, Burns JH, Weber MG, Wojciechowski MF, Sprent J, Strauss SY.  2018.  Symbioses with nitrogen-fixing bacteria: nodulation and phylogenetic data across legume genera. Ecology. 99:502.
Afkhami ME, Mahler DL, Burns JH, Weber MG, Wojciechowski MF, Sprent J, Strauss SY.  2018.  Symbioses with nitrogen-fixing bacteria: nodulation and phylogenetic data across legume genera. Ecology. 99:502.
Adu MO, Yawson DO, Armah FA, Asare PA, Bennett MJ, Broadley MR, White PJ, Dupuy LX.  2016.  Effects of rooting media on root growth and morphology of Brassica rapa seedlings. South African Journal of Plant and Soil. Published online.
Adu MO, Yawson DO, Armah FA, Asare PA, Bennett MJ, Broadley MR, White PJ, Dupuy LX.  2016.  Effects of rooting media on root growth and morphology of Brassica rapa seedlings. South African Journal of Plant and Soil. 33:219-227.
Adu M, Marshall J, Newton AC, Holden N.  2016.  Harpin confers some protection against bacterial pathogens of horticultural crops. The Dundee Conference: Crop Protection in Northern Britain 2016, Dundee, 23-24 February 2016.. :35-42.
Adu MO, Chatot A, Wiesel L, Bennett MJ, Broadley MR, White PJ, Dupuy LX.  2014.  A scanner system for high-resolution quantification of variation in root growth dynamics of Brassica rapa genotypes. Journal of Experimental Botany. 65:2039-2048.
Adriaens ME, Jaillard M, Eijssen LMT, Mayer C, Evelo CTA.  2012.  An evaluation of two-channel ChIP-on-chip and DNA methylation microarray normalization strategies. BMC Genomics. 13:42-42.
Aderhold A, Husmeier D, Lennon JJ, Beale CM, Smith VA.  2012.  Hierarchical Bayesian models in ecology: Reconstructing species interaction networks from non-homogeneous species abundance data. Ecological Informatics. 11:55-64.
Adediran GA, Lundberg D, Almkvist G, Pradas del Real AE, Klysubun W, Hillier S, Gustafsson JP, Simonsson M.  2021.  Micro and nano sized particles in leachates from agricultural soils: phosphorus and sulfur speciation by x-ray micro-spectroscopy. Water Research. 189:ArticleNo.116585.
Addy S, Wilkinson ME.  2021.  Embankment lowering and natural self-recovery improves river-floodplain hydro-geomorphic connectivity of a gravel bed river. Science of the Total Environment. 770
Addy S, Soulsby C, Hartley AJ.  2014.  Controls on the distribution of channel reach morphology in selectively glaciated catchments. Geomorphology. 211:121-133.
Addy S, Wilkinson M.  2016.  An assessment of engineered log jam structures in response to a flood event in an upland gravel-bed river system. Earth Surface Processes and Landforms. 41:1658-1670.
Addy S, Wilkinson ME.  2019.  Geomorphic and retention responses following the restoration of a sand-gravel bed stream. Ecological Engineering. 130:131-146.
Addy S, Cooksley SL, Sime I.  2012.  Impacts of flow regulation on freshwater pearl mussel (Margaritifera margaritifera) habitat in a Scottish montane river. Science of the Total Environment. 432:318-328.
Addy S, Wilkinson ME.  2019.  Representing natural and artificial in-channel large wood in numerical hydraulic and hydrological models. Wiley Interdisciplinary Reviews - Water. 6:ArticleNo.e1389.
Addy S, Soulsby C, Hartley AJ, Tetzlaff D.  2011.  Characterisation of channel reach morphology and associated controls in deglaciated montane catchments in the Cairngorms, Scotland. Geomorphology. 132:176-186.
Addy S, Cooksley SL, Sime I.  2014.  Corrigendum to impacts of flow regulation on freshwater pearl mussel (Margaritifera margaritifera) habitat in a Scottish montane river [Sci. Total Environ. 432 (2012) 318-328]. Science of The Total Environment. 475:155-155.
Addy S, Wilkinson M.  2016.  An assessment of engineered log jam structures in response to a flood event in an upland gravel-bed river system. Earth Surface Processes and Landforms. Published online..
Adbul Salam Y, Phimister E.  2016.  How effective are heuristic solutions for electricity planning in developing countries. Socio-Economic Planning Sciences. 55:14-24.
Adamsone-Fiskovica A, Grivins M, Burton RJF, Elzen B, Flanigan S, Frick R, Hardy C.  2021.  Disentangling critical success factors and principles of on-farm agricultural demonstration events. The Journal of Agricultural Education and Extension. Published online.
Adams T, Ackland G, Marion G, Edwards C.  2011.  Understanding plantation transformation using a size-structured spatial population model. Forest Ecology and Management. 261:799-809.
Adams JL, Tipping E, Bryant CL, Helliwell RC, Toberman H, Quinton J.  2015.  Aged riverine particulate organic carbon in four UK catchments. Science of the Total Environment. 536:648-654.
Adams MA, Buchmann N, Sprent J, Buckley TN, Turnbull TL.  2018.  Crops, nitrogen, water: are legumes friend, foe, or misunderstood ally? Trends in Plant Science. 23:539-550.
Adams MJ, Adkins S, Bragard C, Gilmer D, Li DW, MacFarlane SA, Wong SM, Melcher U, Ratti C, Ryu KH.  2017.  ICTV Virus taxonomy profile: Virgaviridae. Journal of General Virology. 98:1999-2000.
Adams MA, Turnbull TL, Sprent JI, Buchmann N.  2016.  Legumes are different: Leaf nitrogen, photosynthesis, and water use efficiency. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 113:4098-4103.
Adams T, Ackland G, Marion G, Edwards C.  2011.  Effects of local interaction and dispersal on the dynamics of size-structured populations. Ecological Modelling. 222:1414-1422.
Adam MAM, Phillips MS, Jones JT, Blok VC.  2008.  Characterisation of the cellulose binding protein Mj-cbp-1 of the root knot nematode, Meloidogyne javanica. Physiological and Molecular Plant Pathology. 72:21-28. Abstract
Adam MAM, Phillips MS, Tzortzakakis M, Blok VC.  2009.  Characterisation of mjap genes encoding novel secreted proteins from the root-knot nematode, Meloidogyne javanica. Nematology. 11:253-265.
Adam MAM, Phillips MS, Blok VC.  2005.  Identification of Meloidogyne spp. from North East Libya and comparison of their inter- and intra-specific genetic variation using RAPDs. Nematology. 7:599-609. Abstract
Adam MAM, Phillips MS, Blok VC.  2007.  Molecular diagnostic key for identification of single juveniles of seven common and economically important species of root-knot nematode (Meloidogyne spp.). Plant Pathology. 56:190-197. Abstract
Acevedo P, Ruiz-Fons F, Vicente J, Reyes-Garcia AR, Alzaga V, Gortazar C.  2008.  Estimating red deer abundance in a wide range of management situations in Mediterranean habitats. Journal of Zoology. 276(1):37-47.
Abukhabta S, Ghawi SK, Karatzas KA, Charalampopoulos D, McDougall G, Allwood JW, Verrall S, Lavery S, Latimer C, Pourshahidi K et al..  2021.  Sulforaphane-enriched extracts from glucoraphanin-rich broccoli exert antimicrobial activity against gut pathogens in vitro and innovative cooking methods increase in vivo intestinal delivery of sulforphane. European Journal of Nutrition. 60:1263-1276.
Abreu IN, Brennan RM, Kanichukattu EN, Stewart D, Hancock RD, McDougall GJ, Hackett CA.  2020.  Quantitative trait loci mapping of polyphenol metabolites in blackcurrant (Ribes nigrum). Metabolomics. 16:ArticleNo.25.
Abreu IN, Choi YH, Sawaya ACHF, Eberlin MN, Mazzafera P, Verpoorte R.  2011.  Metabolic alterations in different development stages Pilocarpus microphyllus. Planta Medica. 77:293-300.
Abecia L, Balcells J, Fondevila M, Belenguer A, Holtrop G, Lobley GE.  2008.  Contribution of gut microbial lysine to liver and milk amino acids in lactating does. British Journal of Nutrition. 100:977-983.
Abdullahi YA, Akunna JC, White NA, Hallett PD, Wheatley RE.  2008.  Investigating the effects of anaerobic and aerobic post-treatment on quality and stability of organic fraction of municipal solid waste as soil amendment. Bioresource Technology. 99:8631-8636. Abstract
Abdul-Salam Y, Ehlers MH, Harnmeijer J.  2017.  Anaerobic digestion of feedstock grown on marginal land: break-even electricity prices. Energies. 10:ArticleNo.1416.
Abdul-Salam Y, Phimister E.  2017.  Efficiency effects of access to information on small-scale agriculture: empirical evidence from Uganda using stochastic frontier and IRT models. Journal of Agricultural Economics. 68:494-517.
Abdul-Salam Y, Ovando Pol P, Roberts D.  2021.  Understanding the economic barriers to the adoption of agroforestry A Real Options analysis. Journal of Environmental Management. 302
Abdul-Salam Y, Phimister E.  2019.  Modelling the impact of market imperfections on farm household investment in stand-alone solar PV systems. World Development. 116:66-76.
Abdul-Salam Y, Phimister E.  2016.  Efficiency effects of access to information on small-scale agriculture: empirical evidence from Uganda using stochastic frontier and IRT models. Journal of Agricultural Economics. Published online..
Abdul-Salam Y, Phimister E.  2016.  The politico-economics of electricity planning in developing countries: a case study of Ghana. Energy Policy. 88:299-309.
Abdul-Salam Y, Hawes C, Roberts D, Young M.  2019.  The economics of alternative crop production systems in the context of farmer participation in carbon trading markets. Agroecology and Sustainable Food Systems. 43:67-91.
Abdul-Salam Y, Phimister E.  2017.  Efficiency effects of access to information on small-scale agriculture: empirical evidence from Uganda using stochastic frontier and IRT models. Journal of Agricultural Economics. 68:494-517.
Abdul-Salam Y, Phimister E.  2016.  Efficiency effects of access to information on small-scale agriculture: empirical evidence from Uganda using stochastic frontier and IRT models. Journal of Agricultural Economics. Published online..
Abdul-Salam Y, Phimister E.  2016.  The politico-economics of electricity planning in developing countries: a case study of Ghana. Energy Policy. 88:299-309.
Abdel-Ghani AH, Sharma R, Wabila C, Dhanagond S, Owais SJ, Duwayri MA, Al-Dalain SA, Klukas C, Chen D, Lübberstedt T et al..  2019.  Genome-wide association mapping in a diverse spring barley collection reveals the presence of QTL hotspots and candidate genes for root and shoot architecture traits at seedling stage. BMC Plant Biology. 18:ArticleNo216.
Abbeloos R, Backlund JE, Basterrechea Salido M, Bauchet G, Benites-Alfaro O, Birkett C, Calaminos VC, Carceller P, Cornut G, Costa BV et al..  2019.  BrAPI - an Application Programming Interface for plant breeding applications. Bioinformatics. :ArticleNo.btz190.
Abarenkov K, Nilsson RH, Larsson KH, Alexander IJ, Eberhardt U, Erland S, Hoiland K, Kjoller R, Larsson E, Pennanen T et al..  2010.  The UNITE database for molecular identification of fungi - recent updates and future perspectives. New Phytologist. 186(2):281-285.
Abarenkov K, Adams RI, Irinyi L, Agan A, Ambrosio E, Antonelli A, Bahram M, Bengtsson-Palme J, Bok G, Cangren P et al..  2016.  Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard - a report from a May 23-24, 2016 workshop (Gothenburg, Sweden). Mycokeys. 16:1-15.
Abang M, Baum M, Ceccarelli S, Grando S, Linde CC, Yahyaoui A, Zhan J, McDonald BA.  2006.  Differential selection on Rhynchosporium secalis during parasitic and saprophytic phases in the barley scald disease cycle. Phytopathology. 96:1214-1222. Abstract
Abang M, Baum M, Ceccarelli S, Grando S, Linde CC, Yahyaoui AH, Zhan J, McDonald BA.  2006.  Pathogen evolution in response to host resistance genes: Evidence from field experiments with Rhynchosporium secalis on barley. Phytopathology. 96:S2-S2.
Abad ZG, Abad JA, Cacciola SO, Pane A, Faedda R, Moralejo E, Perez-Sierra A, Abad-Campos P, Alvarez-Bernaola LA, Bakonyi J et al..  2014.  Phytophthora niederhauserii sp. nov., a polyphagous species associated with ornamentals, fruit trees and native plants in 13 countries. Mycologia. 106:431-447.
Abad P, Gouzy J, Aury JM, Castagnone-Sereno P, Danchin EGJ, Deleury E, Perfus-Barbeoch L, Anthouard V, Artiguenave F, Blok VC et al..  2008.  Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. Nature Biotechnology. 26:909-915.
Aalders IH, Hough RL, Towers W.  2011.  Risk of erosion in peat soils - an investigation using Bayesian belief networks. Soil Use and Management. 27:538-549.
Aalders IH, Stanik N.  2019.  Spatial units and scales for cultural ecosystem services: a comparison illustrated by cultural heritage and entertainment services in Scotland. Landscape Ecology. 34:1635-1651.
Aalders IH, Ball B, Black HIJ, Campbell CD, Griffiths B, Hopkins D, Hough RL, Lilly A, McKenzie B, Rees RM et al..  2009.  Considerations for Scottish soil monitoring in the European context. European Journal of Soil Science. 60(5):833-843.
Aalders IH.  2008.  Modelling land use decision behavior with Bayesian belief networks. Ecology and Society. 13(1):16.
dos, Reis J, F, Simon M, Gross E, Boddey R, Elliott GN, Loureiro M, de Queiroz L, Chen WM, Bontemps C et al..  2010.  Nodulation and nitrogen fixation by mimosa spp. In the Cerrado and Caatinga biomes of Brazil. New Phytologist. 186(4):934-946.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.