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Trinder C, Brooker R, Davidson H, Robinson D.  2012.  Dynamic trajectories of growth and nitrogen capture by competing plants. New Phytologist. 193:948-958.
Trinder CJ, Artz RRE, Johnson D.  2008.  Temporal patterns of litter production by vascular plants colonising cut-over peatlands. Wetlands. 28(1):245-250.
Trincal V, Thiéry V, Mamindy-Pajany Y, Hillier S.  2018.  Use of hydraulic binders for reducing sulphate leaching: application to gypsiferous soil sampled in Ile-de-France region (France). Environmental Science and Pollution Research. 25:ArticleNo.22977.
Treonis AM, Cook R, Dawson LA, Grayston SJ, Mize T.  2007.  Effects of a plant parasitic nematode (Heterodera trifolii) on clover roots and soil microbial communities. Biology and Fertility of Soils. 43(5):541-548.
Travis JMJ, Smith HS, Ranwala SMW.  2010.  Towards a mechanistic understanding of dispersal evolution in plants: conservation implications. Diversity and Distributions. 16(4):690-702.
Travis AJ, Norton GJ, Datta S, Sarma R, Dasgupta T, Savio FL, Macaulay M, Hedley PE, McNally KL, Sumon MH et al..  2015.  Assessing the genetic diversity of rice originating from Bangladesh, Assam and West Bengal. Rice. 8
Trapero-Mozos A, Morris WL, Ducreux LJM, McLean K, Stephens J, Torrance L, Bryan GJ, Hancock RD, Taylor MA.  2017.  Engineering heat tolerance in potato by temperature-dependent expression of a specific allele of HEAT SHOCK COGNATE 70. Plant Biotechnology Journal. Published online..
Trapero-Mozos A, Ducreux LJM, Bita CE, Morris W, Wiese C, Morris JA, Paterson C, Hedley PE, Hancock RD, Taylor MA.  2018.  A reversible light and genotype dependent acquired thermotolerance response protects the potato plant from excessive temperature. Planta. 247:1377-1393.
Trapero-Mozos A, Morris WL, Ducreux LJM, McLean K, Stephens J, Torrance L, Bryan GJ, Hancock RD, Taylor MA.  2018.  Engineering heat tolerance in potato by temperature-dependent expression of a specific allele of HEAT SHOCK COGNATE 70. Plant Biotechnology Journal. 16:197-207.
Trakal L, Michálková Z, Beesley L, Vítková M, Ourednícek P, Barceló AP, Ettler V, Cíhalová S, Komárek M.  2018.  AMOchar: Amorphous manganese oxide coating of biochar improves its efficiency at removing metal(loid)s from aqueous solutions. Science of the Total Environment. 625:71-78.
Trakal L, Raya-Moreno I, Mitchell K, Beesley L.  2017.  Stabilization of metal(loid)s in two contaminated agricultural soils: Comparing biochar to its non-pyrolysed source material. Chemosphere. 181:150-159.
Townsend SE, Newey SJ, Thirgood SJ, Haydon DT.  2011.  Dissecting the drivers of population cycles: interactions between parasites and mountain hare demography. Ecological Modelling. 222:48-56.
Townsend SE, Newey SJ, Thirgood SJ, Matthews L, Haydon DT.  2009.  Can parasites drive population cycles in mountain hares? Proceedings of the Royal Society of London, B. 276(1662):1611-1617.
Toth IK, van der Wolf JM, Saddler G, Lojkowska E, Helias V, Pirhonen M, Tsror L, Elphinstone JG.  2011.  Dickeya species: an emerging problem for potato production in Europe. Plant Pathology. 60:385-399.
Toth IK, Pritchard L, Birch PRJ.  2006.  Comparative genomics reveals what makes an enterobacterial plant pathogen. Annual Review of Phytopathology. 44:305-336. Abstract
Toth IK, Birch PRJ.  2005.  Rotting softly and stealthily. Current Opinion in Plant Biology. 8:424-429.
Toth IK, Humphris S, Campbell E, Pritchard L.  2015.  Why genomics research on Pectobacterium and Dickeya makes a difference. American Journal of Potato Research. 92:218-222.
Toth I.  2014.  Pesticides "security" threat. Chemistry and Industry. 78:28.
Torronen R, McDougall GJ, Dobson G, Stewart D, Hellström J, Mattila P, Pihlava JM, Karjalainen RO.  2012.  Fortification of blackcurrant juice with crowberry: impact on polyphenol composition, urinary phenoloic metabolites, and postprandial glycemic response in healthy subjects. Journal of Functional Foods. 4:746-756.
Torres-Ca P, Hinojosa MB, Garcia-Ruiz R, Daniell TJ, Carreira JA.  2009.  Linking biogeochemical variability and microbial community structure in forest soils: Abies pinsapo-fir forests as a study case. Ecosistemas. 18:91-102.
Torres GA, Gong Z, Iovene M, Hirsch C, Buell CR, Bryan GJ, Novak P, Macas J, Jiang J.  2011.  Organization and evolution of subtelomeric satellite repeats in the potato genome. Genes Genomes Genetics. 1:85-92.
Torrance L, Lukhovitskaya NI, Schepetilnikov MV, Cowan GH, Ziegler A, Savenkov EI.  2009.  Unusual long-distance movement strategies of Potato mop-top virus RNAs in Nicotiana benthamiana. Molecular Plant-Microbe Interactions. 22:381-390.
Torrance L, Andreev I, Gabrenaite-Verhouskay R, Cowan GH, Makinen K, Taliansky ME.  2006.  An unusual structure at one end of potato potyvirus particles. Journal of Molecular Biology. 357:1-8.
Torrance L, Wright KM, Crutzen F, Cowan GH, Lukhovitskaya NI, Bragard C, Savenkov EI.  2011.  Unusual features of pomoviral RNA movement. Frontiers in Plant Microbe Interactions. 2:259.
Torrance L, Ziegler A, Pittman H, Paterson M, Toth R, Eggleston I.  2006.  Oriented immobilisation of engineered single-chain antibodies to develop biosensors for virus detection. Journal of Virological Methods. 134:164-170. Abstract
del Toro F, Fernandez FT, Tilsner J, Wright KM, Tenllado F, Chung BN, Praveen S, Canto T.  2014.  Potato virus Y HCPro localization at distinct, dynamically related and environment-influenced structures in the cell cytoplasm. Molecular Plant-Microbe Interactions. 27:1331-1343.
Tordoff GM, Chamberlain PM, Crowther TW, Black HIJ, Jones TH, Stott A, Boddy L.  2011.  Invertebrate grazing affects nitrogen partitioning in the saprotrophic fungus Phanerochaete velutina. Soil Biology and Biochemstry. 43:2338-2346.
Topp CFE, Hughes G, Nevison IM, Butler A, Oxley SJP, Havis ND.  2019.  Rhynchosporium leaf scald disease incidence: seed source and spatial pattern. Plant Pathology. 68:1179-1187.
Toorop PE, Cuerva RC, Begg GS, Locardi B, Wishart J, Squire GR, Iannetta PPM.  2012.  Co-adaptation of seed dormancy and flowering time in the arable weed Capsella bursa-pastoris (shepherd's purse). Annals of Botany. 109:481-489.
Toorop PE, Herrera Ballester M, Deng W, Iannetta PPM.  2011.  Osmotic stress tolerance of Capsella bursa-pastoris seeds contributes to bet-hedging in arable fields. Association of Applied Biologists - Agricultural Ecology Research: It's Role in Delivering Sustainable Farm Systems, Dundee, 15-16 June 2011. Aspects of Applied Biology. 109:39-40.
Tondelli A, Pagani D, Ghafoori IN, Rahimi M, Ataei R, Rizza F, Flavell AJ, Cattivelli L.  2014.  Allelic variation at Fr-H1/Vrn-H1 and Fr-H2 loci is the main determinant of frost tolerance in spring barley. Environmental and Experimental Botany. 106:148-155.
Tondelli A, Francia E, Visioni A, Comadran J, Mastrangelo AM, Akar T, Al-Yassin A, Ceccarelli S, Grando S, Benbelkacem A et al..  2014.  QTLs for barley yield adaptation to Mediterranean environments in the 'Nure' x 'Tremois' biparental population. Euphytica. 197:73-86.
Tondelli A, Xu X, Moragues M, Sharma R, Schnaithmann F, Ingvardsen C, Manninen O, Comadran J, Russell J, Waugh R et al..  2013.  Structural and temporal variation in genetic diversity of European spring two-row barley cultivars and association mapping of quantitative traits. Plant Genome. 6
Tomlekova NB, White PJ, Thompson JA, Penchev EA, Nielen S.  2017.  Mutation increasing beta-carotene concentrations does not adversely affect concentrations of essential mineral elements in pepper fruit. PLoS ONE. 12:e0172180.
Tomkins JL, Aungier J, Hazel W, Gilbert L.  2014.  Towards an evolutionary understanding of host questing behaviour in the tick lxodes ricinus. PLoS ONE. 9:e110028.
Tomczynska I, Stefanczyk E, Chmielarz M, Karasiewicz B, Kaminski P, Jones JDG, Lees AK, Sliwka J.  2014.  A locus conferring effective late blight resistance in potato cultivar Sarpo Mira maps to chromosome XI. Theoretical and Applied Genetics. 127:647-657.
Tomcynska I, Jupe F, Hein I, Marczewski W, Sliwka J.  2014.  Hypersensitive response to Potato virus Y in potato cultivar Sarpo Mira is conferred by the Ny-Smira gene located on the long arm of chromosome IX. Molecular Breeding. 34:471-480.
Tomaszewski C, Byrne S, Foito A, Kildea S, Kopecky D, Dolezel J, Heslop-Harrison JS, Stewart D, Barth S.  2012.  Genetic linkage mapping in an F2 perennial ryegrass population saturated with DArT markers. Plant Breeding. 131:345-349.
Toma L, Barnes AP, Sutherland LA, Thomson S, Burnett F, Mathews KB.  2018.  Impact of information transfer on farmers' uptake of innovative crop technologies: a structural equation model applied to survey data. Journal of Technology Transfer. 43:864-881.
Tolkamp BJ, Allcroft DJ, Barrio JP, Bley TAG, Howie JA, Jacobsen TB, Morgan CA, Schweitzer DPN, Wilkinson S, Yeates MP et al..  2011.  The temporal structure of feeding behaviour. American Journal of Physiology - Regulatory, Integrative and Comparative Physiology. 301:R378-R393.
Tolkamp BJ, Yearsley JM, Gordon IJ, Illius AW, Speakman JR, Kyriazakis I.  2007.  Predicting the effects of body fatness on food intake and performance of sheep. British Journal of Nutrition. 97(6):1206-1215.
Toftegaard T, Iason GR, Alexander IJ, Rosendahl S, Taylor AFS.  2010.  The threatened plant intermediate wintergreen (Pyrola media Sw.) associates with a wide range of biotrophic fungi in native Scottish pine woods. Biodiversity and Conservation. 19(14):3963-3971.
Tobin AK, Bowsher CG.  2005.  Nitrogen and carbon metabolism in plastids: evolution, integration and coordination with reactions in the cytosol.. Advances in Botanical Research. 42:113-165.
Toberman H, Tipping EW, Boyle JF, Helliwell RC, Lilly A, Henrys PA.  2015.  Dependence of ombrotrophic peat nitrogen on phosphorus and climate. Biogeochemistry. 125:11-20.
Toberman H, Freeman C, Evans C, Fenner N, Artz RRE.  2008.  Summer drought decreases soil fungal diversity and associated phenol oxidase activity in upland Calluna heathland soil. FEMS Microbiology Ecology. 66(2):426-436.
Toberman H, Freeman C, Artz RRE, Evans C, Fenner N.  2008.  Impeded drainage stimulates extracellular phenol oxidase activity in riparian peat cores. Soil Use and Management. 24(4):357-365.
Toberman H, Laiho R, Evans CD, Artz RRE, Fenner N, Vavrova P, Freeman C.  2010.  Long-term drainage for forestry inhibits extracellular phenol oxidase activity in Finnish boreal mire peat. European Journal of Soil Science. 61(6):950-957.
Toberman H, Evan C, Freeman C, Fenner N, Artz RRE.  2008.  Summer drought effects upon soil and litter phenol oxidase activity and soluble carbon release in an upland Calluna heathland. Soil Biology and Biochemistry. 40(6):1519-1532.
Titlyanov EA, Kiyashko SI, Titlyanova TV, Kalita TL, Raven JA.  2008.  δ13C and δ15N values in reef corals Porites lutea and P. cylindrica and in their epilithic and endolithic algae. Marine Biology. 155:353-361. Abstract
Tipping E, Davies JAC, Henrys PA, Jarvis SG, Rowe EC, Smart SM, Le Duc MG, Marrs RH, Pakeman RJ.  2019.  Measured estimates of semi-natural terrestrial NPP in Great Britain: comparison with modelled values, and dependence on atmospheric nitrogen deposition. Biogeochemistry. 144:215-227.
Tipping E, Benham S, Boyle JF, Crow P, Davies J, Fischer U, Guyatt H, Helliwell RC, Jackson-Blake L, Lawlor AJ et al..  2014.  Atmospheric deposition of phosphorus to land and freshwater. Environmental Science: Processes and Impacts. 16:1608-1617.
Tipping EW, Davies J, Henrys PA, Kirk G, Lilly A, Dragosits U, Carnell EJ, Dore A, Sutton M, Tomlinson SJ.  2017.  Long-term increases in soil carbon due to ecosystem fertilization by atmospheric nitrogen deposition demonstrated by regional-scale modelling and observations. Scientific Reports. 7:ArticleNo.1890.
Tingem Munang R, Thiaw I, Rivington M.  2011.  Ecosystem management: tomorrow's approach to enhancing food security under a changing climate. Sustainability. 3:937-954.
Tingem M, Rivington M, Bellocchi G, Azam-Ali S, Colls J.  2008.  Adaptation assessments for crop production in response to climate change in Cameroon. African Journal of Plant Science and Biotechnology. 2:10-17.
Tingem M, Rivington M, Bellocchi G, Azam-Ali S, Colls J.  2009.  Crop yield model validation for Cameroon. Theoretical and Applied Climatology. 96(3-4):275-280.
Tingem M, Rivington M, Bellocchi G, Azam-Ali S, Colls J.  2008.  Effects of climate change on Cameroon crop production: Simulation results using GCM scenarios. Climate Research. 36:65-77.
Tingem M, Rivington M, Azam-Ali S, Colls J.  2007.  Assessment of the ClimGen stochastic weather generator at Cameroon sites. African Journal of Environmental Science and Technology. 1:86-92.
Tingem M, Rivington M, Bellocchi G.  2009.  Adaptation assessments for crop production in response to climate change in Cameroon. Agronomy for Sustainable Development.. 29(2):247-256.
Tingem M, Rivington M, Colls J.  2008.  Climate variability and maize production in Cameroon: simulating the effects of extreme dry and wet years. Singapore Journal of Tropical Geography. 29:357-370.
Tinch R, Beaumon N, Sunderlan T, Ozdemiroglu E, Barton D, Bowe C, Borger T, Burgess P, Cooper CN, Faccioli M et al..  2019.  Economic valuation of ecosystem goods and services: a review for decision makers. Journal of Environmental Economics and Policy. 8:359-378.
Tilston EL, Halpin C, Hopkins DW.  2013.  Decomposition of tobacco roots with modified phenylpropanoid content by fungi with contrasting lignocellulose degradation strategies. Biology and Fertility of Soils. 49:305-311.
Tilston EL, Halpin C, Hopkins DW.  2008.  Tissue culture propagation alters plant-microbe interactions in tobacco rhizosphere. Biology and Fertility of Soils. 44:897-901. Abstract
Tilsner J, Nicolas W, Rosado A, Bayer EM.  2016.  Staying tight: Plasmodesmal membrane contact sites and the control of cell-to-cell connectivity in plants. Annual Review of Plant Biology.
Tilsner J.  2015.  Techniques for RNA in vivo imaging in plants. Journal of Microscopy. 258:1-5.
Tilsner J, Nicolas W, Rosado A, Bayer EM.  2016.  Staying tight: Plasmodesmal membrane contact sites and the control of cell-to-cell connectivity in plants. Annual Review of Plant Biology. 67:337-364.
Tilsner J, Amari K, Torrance L.  2011.  Plasmodesmata viewed as specialised membrane adhesion sites. Protoplasma. 248:39-60.
Tilsner J, Oparka KJ.  2010.  Tracking the green invaders: advances in imaging virus infection in plants. Biochemical Journal. 430:21-37.
Tilsner J, Oparka KJ.  2012.  Missing links? The connection between replication and movement of plant RNA viruses Current Opinion in Virology. 2:705-711.
Tilsner J, Linnik O, Louveaux M, Roberts IM, Chapman SN, Oparka KJ.  2013.  Replication and trafficking of a plant virus are coupled at the entrances of plasmodesmata. Journal of Cell Biology. 201:981-995.
Tilsner J, Linnik O, Wright KM, Bell K, Roberts AG, Lacomme C, Santa Cruz S, Oparka KJ.  2012.  The TGB1 movement protein of potato virus X reorganises actin and endomembranes into the X--body, a viral replication factory. Plant Physiology. 158:1359-1370.
Tikkanen J, Haara A, Dinnie L, Reusser D, Hujala T, Kajanus M, Kangas J, Kurttila M, Leskinen P.  2019.  Stochastic cognitive mapping to build common ground for selecting cases in research projects. Regional Environmental Change. 19:913-926.
Tighe P, Duthie GG, Vaughan N, Brittenden J, Simpson WG, Duthie S, Mutch W, Wahle K, Horgan GW, Thies F.  2010.  Effect of increased consumption of whole-grain foods on blood pressure and other cardiovascular risk markers in healthy middle-aged persons: a randomised controlled trial. American Journal of Clinical Nutrition. 94:733-740.
Tian D, Asseng S, Martinez CJ, Misra V, Cammarano D, Ortiz B.  2015.  Does decadal climate variation influence Wheat and Maize production in the southeast USA? Agricultural Forest Meteorology. 204:1-9.
Tian R, Heiden S, Osman WAM, Ardley JA, James EK, Gollagher MM, Tiwari R, Seshadri R, Kyrpides NC, Reeve WG.  2017.  Evolution of a multi-step phosphorelay signal transduction system in Ensifer: recruitment of the sigma factor RpoN and a novel enhances binding protein triggers acid-activated gene expression. Molecular Microbiology. 103:829-844.
Thwaites RH, Ashmore MR, Morton AJ, Pakeman RJ.  2006.  The effects of tropospheric ozone on the species dynamics of calcareous grassland. Environmental Pollution. 144(2):500-509.
Thuenemann EC, Lenzi P, Love AJ, Taliansky M, Becares M, Zuniga S, Enjuanes L, Zahmanova GG, Minkov IN, Matic S et al..  2013.  The use of transient expression systems for the rapid production of virus-like particles in plants. Current Pharmaceutical Design. 19:5564-5573.
Thoss V, O'Reilly-Wapstra J, Iason GR.  2007.  Assessment and implications of intra-specific and phenological variability in monoterpenes of Scots pine (Pinus sylvestris) foliage. Journal of Chemical Ecology. 33(3):477-491.
Thorsen MK, Hopkins DW, Woodward S, McKenzie BM.  2010.  Resilience of microorganisms and aggregation of a sandy calcareous soil to amendment with organic and synthetic fertilizer. Soil Use and Management. 26:149-157.
Thorpe P, Mantelin S, Cock PJA, Blok VC, Coke MC, van Den Akker SE, Guzeeva E, Lilley CJ, Smant G, Reid AJ et al..  2014.  Genomic characterisation of the effector complement of the potato cyst nematode Globodera pallida. BMC Genomics. 15
Thornton I, Farago ME, Thums CR, Parrish RR, McGill RAR, Breward N, Fortey NJ, Simpson P, Young SD, Tye AM et al..  2008.  Urban geochemistry: research strategies to assist risk assessment and remediation of brownfield sites in urban areas. Environmental Geochemistry and Health. 30:565-576.
Thornton B, Martin G, Procee M, Miller DR, Coull MC, Yao HY, Chapman SJ, Hudson G, Midwood AJ.  2015.  Distributions of carbon and nitrogen isotopes in Scotland's topsoil: a national-scale study. European Journal of Soil Science. 66:1002-1011.
Thornton B, Zhang ZL, Mayes RW, Hogberg MN, Midwood AJ.  2011.  Can gas chromatography combustion isotope ratio mass spectrometry be used to quantify organic compound abundance? Rapid Communications in Mass Spectrometry. 23:2433-2438.
Thornton B, Osborne SM, Paterson E, Cash P.  2007.  A proteomic and targeted metabolomic approach to investigate change in Lolium perenne roots when challenged with glycine. Journal of Experimental Botany. 58(7):1581-1590.
Thordal-Christensen H, Birch PRJ, Spanu PD, Panstruga R.  2018.  Why did filamentous plant pathogens evolve the potential to secrete hundreds of effectors to enable disease? Molecular Plant Pathology. 19:781-785.
Thonur L, Maley M, Gilray J, Crook T, Laming E, Turnbull D, Nath M, Willoughby K.  2012.  One-step multiplex real time RT-PCR for the detection of bovine respiratory syncytial virus, bovine herpesvirus 1 and bovine parainfluenza virus 3. BMC Veterinary Research. 8:37-37.
Thomson K, Vellinga N, Slee B, Ibiyemi A.  2014.  Mapping socio-economic performance in rural Scotland. Scottish Geographical Journal. 130:1-21.
Thomson NR, Yeats C, Bell K, Holden MTG, Bentley SD, Livingstone M, Cerde AM, Harris B, Doggett J, Ormond D et al..  2005.  The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to inter-species variation.. Genome Research. 15:629-640. Abstract
Thomsen NI, Binning PJ, McKnight US, Tuxen N, Bjerg PL, Troldborg M.  2016.  A Bayesian belief network approach for assessing uncertainty in conceptual site models at contaminated sites. Journal of Contaminant Hydrology. 188:12-28.
Thompson CW, Aspinall P, Roe J, Robertson L, Miller DR.  2016.  Mitigating stress and supporting health in deprived urban communities: the importance of green space and the social environment. International Journal of Environmental Research and Public Health. 13:ArticleNo.440.
Thompson SP, Kennedy H, Day SJ, Baker AR, Butler BM, Safi E, Kelly J, Male A, Potter J, Cobb T et al..  2018.  A slow-cooling-rate in situ cell for long-duration studies of mineral precipitation in cold aqueous environments on earth and other planetary bodies. Journal of Applied Crystallography. 51:1197-1210.
Thomas-Sharma S, Abdurahman A, Ali S, Andrade-Piedra JL, Bao S, Charkowski AO, Crooke D, Kadian M, Kromann P, Struik PC et al..  2016.  Seed degeneration in potato: the need for an integrated seed health strategy to mitigate the problem in developing countries. Plant Pathology. 65:3-16.
Thomas WTB.  2014.  The value of decimal cereal growth stages. Annals of Applied Biology. 165:303-304.
Thomas D, Finan C, Newport MJ, Jones S.  2015.  DNA-entropy reveals a significant difference in complexity between housekeeping and tissue specific gene promoters. Computational Biology and Chemistry. 58:19-24.
Thomas CR, Gordon IJ, Wooldridge S, Marshall P.  2012.  Balancing the trade-offs between ecological and economic risks in the Great Barrier Reef: a pragmatic conceptual framework. Human and Ecological Risk Assessment.. 18:69-91.
Thomas CL, Alcock TD, Graham NS, Hayden R, Matterson S, Wilson L, Young SD, Dupuy LX, White PJ, Hammond JP et al..  2016.  Root morphology and seed and leaf ionomic traits in a Brassica napus L. diversity panel show wide phenotypic variation and are characteristic of crop habit. BMC Plant Biology.. 16
Thomas MM, Millard P, Watt MS, Turnbull MH, Peltzer D, Whitehead D.  2008.  The impact of defoliation on nitrogen translocation patterns in Buddleia davidii FRANCH. Functional Plant Biology. 35(6):462-469.
Thomas WTB.  2015.  Drought-resistant cereals: impact on water sustainability and nutritional quality. Proceedings of the Nutrition Society. 74:191-197.
Thomas CL, Graham NS, Hayden R, Meacham MC, Neugebauer K, Nightingale M, Dupuy LX, Hammond JP, White PJ, Broadley MR.  2016.  High-throughput phenotyping (HTP) identifies seedling root traits linked to variation in seed yield and nutrient capture in field-grown oilseed rape (Brassica napus L.). Annals of Botany. 118:655-665.
Thole V, Bassard JE, Trick M, Ramirez-Gonzalez R, Afshar B, Love N, Breitel D, Hill L, Foito A, Shepherd L et al..  2019.  RNA-seq, de novo transcriptome assembly and flavonoid gene analysis in 13 wild and cultivated berry fruit species with high content of phenolics. BMC Genomics. 20:ArticleNo.995.
Thirugnanasambandam A, Wright KM, Havis ND, Whisson SC, Newton AC.  2011.  Agrobacterium-mediated transformation of the barley pathogen Ramularia collo-cygni with fluorescent marker tags and live tissue imaging of infection development. Plant Pathology. 60:929-937.
Thirugnanasambandam A, Wright KM, Atkins SD, Whisson SC, Newton AC.  2011.  Infection of Rrs1 barley by an incompatible race of the fungus, Rhynchosporium secalis, expressing the green fluorescent protein. Plant Pathology. 60:513-521.
Thirgood SJ, Mduma SAR, Keyyu JD, Laurenson MK.  2007.  The value of long-term research: conservation science and practice in Tanzania. Conservation Biology. 21(3):576-579.
Thirgood SJ.  2009.  New perspectives on managing wildlife diseases. Journal of Applied Ecology.. 46(2):454-456.
Thirgood SJ, Redpath S.  2008.  Hen harriers and red grouse: science, politics and human-wildlife conflict. Journal of Applied Ecology. 45(5):1488-1492.
Thilliez GJA, Armstrong MR, Lim TY, Baker K, Jouet A, Ward B, van Oosterhout C, Jones JDG, Huitema E, Birch PRJ et al..  In Press.  Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes. New Phytologist. Published online..
Thilliez GJA, Armstrong MR, Lim TY, Baker K, Jouet A, Ward B, van Oosterhout C, Jones JDG, Huitema E, Birch PRJ et al..  2019.  Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes. New Phytologist. 221:1634-1648.
Thies F, Masson LF, Rudd A, Vaughan N, Tsang C, Brittenden J, Simpson WG, Duthie S, Horgan GW, Duthie G.  2012.  Effect of a tomato-rich diet on markers of cardiovascular disease risk in moderately overweight, disease-free, middle-aged adults: a randomized controlled trial. American Journal of Clinical Nutrition. 95:1013-1022.
Thiel T, Graner A, Waugh R, Grosse I, Close TJ, Stein N.  2009.  Evidence and evolutionary analysis of ancient whole-genome duplication in barley predating the divergence from rice. BMC Evolutionary Biology. 9:-209.
Theobold CM, Chatterjee A, Horgan GW.  2012.  A hierarchical Bayesian mixture model for repeated dietary records. Food and Chemical Toxicology. 50:320-327.
Thanh VTK, Orskov ER.  2006.  Causes of differences in urinary excretion of purine derivatives in buffaloes and cattle. Animal Science. 82(3):355-358.
Tetzlaff D, McDonnell JJ, Uhlenbrook S, McGuire KJ, Bogaart P, Naef F, Baird AJ, Dunn SM, Soulsby C.  2008.  Conceptualising catchment processes: simply too complex? Hydrological Processes. 22(11):1727-1730.
Tetzlaff D, Soulsby C, Waldron S, Malcolm BDIAPJS, Lilly A, Youngson AF.  2007.  Conceptualisation of runoff processes using tracers and GIS analysis in a nested mesoscale catchment. Hydrological Processes. 21(10):1289-1307.
Tetzlaff D, Waldron S, Brewer MJ, Soulsby C.  2007.  Assessing nested hydrological and hydrochemical behaviour of a mesoscale catchment using continuous tracer data. Journal of Hydrology. 336:430-443. Abstract
Tetzlaff D, Soulsby C, Birkel C.  2010.  Hydrological connectivity and microbiological fluxes in montane catchments: the role of seasonality and climatic variability. Hydrological Processes. 24(9):1231-1235.
Tetzlaff D, Seibert J, McGuire K, Laudon H, Burns D, Dunn SM, Soulsby C.  2009.  How does landscape structure influence catchment transit time across different geomorphic provinces? Hydrological Processes. 23(6):945-953.
Testoni SA, Melo VF, Dawson LA, Salvador FAD, Kunii PA.  2019.  Validation of a Standard Operating Procedure (SOP) for forensic soils investigation in Brazil. Revista Brasileira Ciencia Do Solo. 43:ArticleNo.e0190010.
Terzi LC, Simpson GG.  2009.  Arabidopsis RNA immunoprecipitation. Plant Journal. 59:163-168.
Terrazas RA, Balbirnie-Cumming K, Morris J, Hedley PE, Russell J, Paterson E, Baggs EM, Fridman E, Bulgarelli D.  2020.  A footprint of plant eco-geographic adaptation on the composition of the barley rhizosphere bacterial microbiota. Scientific Reports. 10:ArticleNo.12916.
Ternan NG, Moore ND, Smyth D, McDougall GJ, Allwood JW, Verrall S, Gill CIR, Dooley JSG, McMullan G.  2018.  Increased sporulation underpins adaptation of Clostridium difficile strain 630 to a biologically-relevant faecal environment, with implications for pathogenicity. Scientific Reports. 8:ArticleNo.16691.
Teodoro M, Trakal L, Gallagher BN, Simek P, Soudek P, Poherely M, Beesley L, Jacka L, Kovar M, Seyedsadr S et al..  2020.  Application of co-composted biochar significantly improved plant-growth relevant physical/chemical properties of a metal contaminated soil. Chemosphere. 242:ArticleNo.UNSP125255.
Templer PH, Mack MC, Chapin FS, Christenson LM, Compton JE, Crook HD, Currie WS, Curtis CJ, Dail DB, D'Antonio CM et al..  2012.  Sinks for nitrogen inputs in terrestrial ecosystems: a meta-analysis of N-15 tracer field studies. Ecology. 93:1816-1829.
Teixeira MA, Sela N, Atamian HS, Bao E, Chaudhary R, MacWilliams J, He JM, Mantelin S, Girke T, Kaloshian I.  2018.  Sequence analysis of the potato aphid Macrosiphum euphorbiae transcriptome identified two new viruses. PLoS ONE. 13:ArticleNo.e0193239.
Teixeira A, Toorop PE, Iannetta PPM.  2020.  Differential interspecific adaptation to abiotic stress by plantago species. Frontiers in Plant Science. 11:ArticleNo.573039.
Teel T, Manfredo M, Jensen FS, Buijs A, Fischer A, Riepe C, Arlinghaus R, Jacobs M.  2010.  Understanding the cognitive basis for human-wildlife relationships. International Journal of Sociology. 40:104-123.
Taylor-Davis K, Callaway RM, Fajardo A, Pauchard A, Nunez MA, Brooker RW, Maxwell BD, Dimarco RD, Peltzer DA, Mason B et al..  2018.  Severity of impacts of an introduced species corresponds with regional eco-evolutionary experience. Ecography. 42:1-11.
Taylor MA.  2018.  Routes to genetic gain in potato. Nature Plants. 4:631-632.
Taylor JA, Chen HY, Smallwood M, Marshall B.  2018.  Investigations into the opportunity for spatial management of the quality and quantity of production in UK potato systems. Field Crops Research. 229:95-102.
Taylor AR, Taylor AFS.  2014.  Assessing daily egestion rates in earthworms: using fungal spores as a natural soil marker to estimate gut transit time. Biology and Fertility of Soils. 50:179-183.
Taylor MA, Fraser PD.  2011.  Solanesol: added value from solanaceous waste. Phytochemistry. 72:1323-1327.
Taylor DL, Leung LKP, Gordon IJ.  2011.  The impact of feral pigs (Sus scrofa) on an Australian lowland tropical rainforest. Wildlife Research. 38:437-445.
Tavares LR, McDougall GJ, Fortalezas S, Stewart D, Ferreira RB, Santos CN.  2012.  The neuroprotective potential of phenolic-enriched fractions from four juniperus species found in Portugal. Food Chemistry. 135:562-570.
Tavares LR, Pimpao R, McDougall G, Stewart D, Ferreira RB, Santos CN.  2013.  Elucidating phytochemical production in Juniperus sp.: seasonality and response to stress situations. Journal of Agricultural and Food Chemistry. 61:4044-4052.
Tavares LR, Figueira I, Macedo D, McDougall GJ, Leitao MC, Vieira HLA, Stewart D, Alves PM, Ferreira RB, Santos CN.  2012.  Neuroprotective effect of blackberry (Rubus sp.) polyphenols is potentiated after simulated gastronintestinal digestion. Food Chemistry. 131:1443-1452.
Tavares LR, Figueira I, McDougall GJ, Vieira HLA, Stewart D, Alves PM, Ferreira RB, Santos CN.  2013.  Neuroprotective effects of digested polyphenols from wild blackberry species. European Journal of Nutrition. 52:225-236.
Tavares LR, Fortalezas S, Carrilho C, McDougall GJ, Stewart D, Ferreira RB, Santos CN.  2010.  Antioxidant and antiproliferative properties of strawberry tree tissues. Journal of Berry Research. 1:3-12.
Tattersall RJ, Prashar A, Singh KD, Tokarczuk PF, Erichsen JT, Hocking PM, Guggenheim JA.  2010.  Ex vivo magnetic resonance imaging of crystalline lens dimensions in chicken. Molecular Vision. 16:144-153.
Tate KR, Ross DJ, Saggar S, Hedley CB, Dando J, Singh BK, Lamb SJ.  2007.  Methane uptake in soils from Pinus radiata plantations, a reverting shrubland and adjacent pastures: effects of land-use change, and soil texture, water and mineral nitrogen. Soil Biology and Biochemistry. 39(7):1437-1449.
Tarfasa S, Balana BB, Tefera T, Woldeamanuel T, Moges A, Dinato M, Black HIJ.  2019.  Corrigendum to Modeling smallholder farmers' preferences for soil management measures: a case study from South Ethiopia. [Ecol. Econ. 145 (2018), 410-419.]. Ecological Economics. 156:433.
Tarfasa S, Balana BB, Tefera T, Woldeamanuel T, Moges A, Dinato M, Black HIJ.  2018.  Modeling smallholder farmers' preferences for soil management measures : A case study from South Ethiopia. Ecological Economics. 145:410-419.
Tao FL, Rotter RP, Palosuo T, Diaz-Ambrona CGH, Minguez MI, Semenov MA, Kersebaum KC, Nendel C, Cammarano D, Hoffmann H et al..  2017.  Designing future barley ideotypes using a crop model ensemble. European Journal of Agronomy. 82:144-162.
Tao FL, Rotter RP, Palosuo T, Diaz-Ambrona CGH, Minguez MI, Semenov MA, Kersebaum KC, Nendel C, Specka X, Hoffmann H et al..  2018.  Contribution of crop model structure, parameters and climate projections to uncertainty in climate change impact assessments. Global Change Biology. 24:1291-1307.
Tao FL, Rotter RP, Palosuo T, Diaz-Ambrona CGH, Minguez MI, Semenov MA, Kersebaum KC, Nendel C, Specka X, Hoffmann H et al..  2018.  Contribution of crop model structure, parameters and climate projections to uncertainty in climate change impact assessments. Global Change Biology. 24:1291-1307.
Tao FL, Rotter RP, Palosuo T, Diaz-Ambrona CGH, Minguez MI, Semenov MA, Kersebaum KC, Nendel C, Cammarano D, Hoffmann H et al..  2017.  Designing future barley ideotypes using a crop model ensemble. European Journal of Agronomy. 82:144-162.
Tandy S, Brittain S, Grail BM, McLeod CW, Paterson E, Tomos AD.  2013.  Fine scale measurement and mapping of uranium in soil solution in soil and plant-soil microcosms, with special reference to depleted uranium. Plant and Soil. 368:471-482.
Tanaka K, Hanley N, Kuhfuss L.  2022.  Farmers’ preferences toward an outcomebased payment for ecosystem service scheme in Japan. Journal of Agricultural Economics.
Tan HW, Weir BS, Carter N, Heenan PB, Ridgway HJ, James EK, Sprent JI, Young JPW, Andrews M.  2012.  Rhizobia with 16S rRNA and nifH similar to Mesorhizobium huakuii but Novel recA, glnII, nodA and nodC genes are symbionts of New Zealand Carmichaelinae. PLoS ONE, e47677. 7
Tamburic B, Evenhuis CR, Suggett DJ, Larkum AWD, Raven JA, Ralph PJ.  2015.  Gas transfer controls carbon limitation during biomass production by marine microalgae. Chemsuschem. 8:2727-2736.
Taliansky ME, Samarskaya V, Zavriev SK, Fesenko I, Kalinina NO, Love AJ.  2021.  RNA-based technologies for engineering plant virus resistance. Plants. 10:ArticleNo.82.
Taliansky ME, Brown JWS, Rajam ML, Valkonen JPT, Kalinina NO.  2010.  Involvement of the plant nucleolus in virus and viroid infections: Parallels with animal pathosystems. Advances in Virus Research. 77:119-158.
Talevich E, Invergo BM, Cock PJA, Chapman BA.  2012.  Bio.Phylo: a unified toolkit for processing, analyzing and visualizing phylogenetic trees in Biophyton. BMC Bioinformatics. 13:209.
Tak N, Awasthi E, Bissa G, Meghwal RR, James EK, Sprent JS, Gehlot HS.  2016.  Multi locus sequence analysis and symbiotic characterization of novel Ensifer strains nodulating Tephrosia spp. In the Indian Thar Desert. Systematic and Applied Microbiology. 39:534-545.
Tagarelli G, Fiorini S, Piro A, Luiselli D, Tagarelli A, Pettener D.  2007.  Ethnicity and biodemographic structure in the Arbereshe of the province of Cosenza, Souther Italy in the XIX century. Collegium Antropologicum. 31:331-338.
Taft HE, Cross P, Hastings A, Yeluripati J, Jones DL.  2019.  Estimating greenhouse gases emissions from horticultural peat soils using a DNDC modelling approach. Journal of Environmental Management. 233:681-694.
Tadie D, Fischer A.  2017.  Natural resource governance in lower Omo, Ethiopia - negotiation processes instead of property rights and rules? International Journal of the Commons. 11:ArticleNo.716.
Ta CAK, Pebsworth PA, Liu R, Hillier S, Gray N, Arnason JT, Young SL.  2018.  Soil eaten by chacma baboons adsorbs polar plant secondary metabolites representative of those found in their diet. Environmental Geochemistry and Health.
S
Szubert J, Reiff C, Thorburn AP, Singh BK.  2007.  REMA: A computer-based mapping tool for analysis of restriction sites in multiple DNA sequences. Journal of Microbiological Methods. 69(2):411-413.
Szili-Kovacs T, Torok K, Tilston EL, Hopkins DW.  2007.  Promoting microbial immobilization of soil nitrogen during restoration of abandoned agricultural fields by organic additions. Biology and Fertility of Soils. 43:823-828.
Szarejko I, Forster BP.  2007.  Doubled haploidy and induced mutation. Euphytica. 158:359-370. Abstract
Syed NH, Kalyna M, Marquez Y, Barta A, Brown JWS.  2012.  Alternative splicing in plants - coming of age. Trends in Plant Science. 17:616-623.
Syed NH, Sorensen AP, Antonise R, van de Wiel C, van der Linden CG, van't Westende W, Hooftman DAP, den Nijs HCM, Flavell AJ.  2006.  A detailed linkage map of lettuce based on SSAP, AFLP and NBS markers. Theoretical and Applied Genetics. 112:517-527. Abstract
Syed NH, Sureshsundar S, Wilkinson MJ, Bhau BS, Cavalcanti JJV, Flavell AJ.  2005.  Ty1-copia retrotransposon-based SSAP marker development in cashew (Anacardium occidentale L.). Theoretical and Applied Genetics. 110:1195-1202.
Sweetman C, Sadras VO, Hancock RD, Soole KL, Ford CM.  2014.  Metabolic effects of elevated temperature on organic acid degradation in ripening Vitis vinifera fruit. Journal of Experimental Botany. 65:5975-5988.
Swanston JS, Newton AC, Hoad SP, Spoor W.  2005.  Barleys grown as cultivar mixtures compared with blends made before and after malting, for effects on malting performance. Journal of the Institute of Brewing. 111:144-152. Abstract
Swanston JS, Smith PL, Agu RC, Brosnan JM, Bringhurst TA, Jack FR.  2012.  Variation, across environments within the UK, in grain protein and grain hardness, in wheat varieties of differing distilling quality. Field Crops Research. 127:146-152.
Swanston JS, Middlefell-Williams J.  2012.  The influence of steep regime and germination period on the malting properties of some hull-less barley lines. Journal of the Institute of Brewing. 118:186-191.
Swanston JS, Newton AC, Hoad SP, Spoor W.  2006.  Variation across environments in patterns of water uptake and endosperm modification in barley varieties and variety mixtures. Journal of the Science of Food and Agriculture. 86:826-833. Abstract
Swanston JS, Thomas TW, Keith RP, Middlefell-Williams JE.  2017.  Variation in grain size and shape in a population of hull-less barley and its influence on yield and quality traits. Journal of Agricultural Science. 155:117-128.
Swanston JS, Newton AC.  2005.  Mixtures of UK wheat as an efficient and environmentally friendly source for bioethanol. Journal of Industrial Ecology. 9:109-126. Abstract
Swanston JS, Smith PL, Thomas WTB, Sylvester-Bradley R, Kindred D, Brosnan JM, Bringhurst TA, Agu RC.  2014.  Stability, across environments, of grain and alcohol yield, in soft wheat varieties grown for grain distilling or bioethanol production. Journal of the Science of Food and Agriculture. 94:3234-3240.
Swanston JS, Smith PL, Gillespie TL, Brosnan JM, Bringhurst TA, Agu RC.  2007.  Associations between grain characteristics and alcohol yield among soft wheat varieties. Journal of the Science of Food and Agriculture. 87:676-683. Abstract
Swanston JS, Newton AC, Brosnan JM, Fotheringham A, Glasgow E.  2005.  Determining the spirit yield of wheat varieties and variety mixtures. Journal of Cereal Science. 42:127-134. Abstract
Swanston JS, Middlefell-Williams J, Forster BP, Thomas WTB.  2011.  Effects of grain and malt beta-glucan on distilling quality in a population of hull-less barley. Journal of the Institute of Brewing. 117:389-393.
Swanson MM, Reavy B, Makarova KS, Cock PJ, Hopkins DW, Torrance L, Koonin EV, Taliansky M.  2012.  Novel bacteriophages containing a genome of another bacteriophage within their genomes. PLoS ONE. 7:e40683.
Swanson MM, Fraser G, Daniell TJ, Torrance L, Gregory PJ, Taliansky ME.  2009.  Viruses in soils: morphological diversity and abundance in the rhizosphere. Annals of Applied Biology. 155:51-60. Abstract
Swamy M, Beck-Garcia K, Beck-Garcia E, Hartl FA, Morath A, Yousefi OS, Pashupati Dopfer E, Molnar E, Schulze AK, Blanco R et al..  2016.  A cholesterol-based allostery model of T cell receptor phosphorylation. Immunity. 44:1091-1101.
Swain DL, Friend MA, Mayes RW, Wilson LA, Hutchings MR.  2008.  Combining an active transponder system with sprayed n-alkanes to quantify investigative and ingestive grazing behaviour of dairy cattle in pastures treated with slurry. Applied Animal Behaviour Science. 109(2-4):211-222.
Sverrisdottir E, Sundmark EHR, Johnsen HO, Kirk HG, Asp T, Janss L, Bryan G, Nielsen KL.  2018.  The value of expanding the training population to improve genomic selection models in tetraploid potato. Frontiers in Plant Science. 9:ArticleNo.1118.
Sverrisdóttir E, Sundmark EHR, Johnsen HO, Kirk HG, Asp T, Janss L, Bryan G, Nielsen KL.  2018.  The value of expanding the training population to improve genomic selection models in tetraploid potato. Frontiers in Plant Science. 9:ArticleNo.1118.
Sutherland LA, Mills J, Ingram J, Burton RJF, Dwyer J, Blackstock KL.  2013.  Considering the source: Commercialisation and trust in agri-environmental information and advisory services in England. Journal of Environmental Management. 118:96-205.
Sutherland LA, Holstead K.  2014.  Future-proofing the farm: On-farm wind turbine development in farm business decision-making. Land Use Policy. 36:102-112.
Sutherland WJ, Albon SD, Allison H, Armstrong-Brown S, Bailey MJ, Bereton T, Boyd IL, Carey P, Edwards J, Gill M et al..  2010.  The identification of priority opportunities for UK nature conservation policy. Journal of Applied Ecology. 47(5):955-965.
Sutherland LA, Gabriel D, Hathaway-Jenkins L, Pascual U, Schmutz U, Rigby D, Godwin R, Sait S, Sakrabani R, Kunin B et al..  2012.  The 'neighbourhood effect': a multidisciplinary assessment of the case for farmer co-ordination in agri-environmental programmes. Land Use Policy. 29:502-512.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.