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Publications list

Found 5892 results

2007
Albon SD, Brewer MJ, Nolan AJ, Cope D.  2007.  Quantifying the grazing impacts associated with different herbivores on rangelands. Journal of Applied Ecology. 44(6):1176-1187.
Brown KM.  2007.  Reconciling moral and legal collective entitlement: Lessons for community-based land reform. Land Use Policy. 24(4):633-643.
Walker KJ, Warman EA, Bhogal A, Cross RB, Pywell RF, Meek WR, Chambers BJ, Pakeman RJ.  2007.  Recreation of lowland heathland on ex-arable land: assessing the limiting processes on two sites with contrasting soil fertility and pH. Journal of Applied Ecology. 44(3):573-582.
Beale CM, Lennon JJ, Elston DA, Brewer MJ, Yearsley JM.  2007.  Red herrings remain in geographical ecology: a reply to Hawkins et al. (2007). Ecography. 30:845-847.
Kay D, Aitken M, Crowther J, Dickson I, Edwards AC, Francis C, Hopkins M, Jeffrey W, Kay C, McDonald MDATD et al..  2007.  Reducing fluxes of faecal indicator compliance parameters to bathing waters from diffuse agricultural sources: The Brighouse Bay study, Scotland. Environmental Pollution. 147(1):138-149.
Szubert J, Reiff C, Thorburn AP, Singh BK.  2007.  REMA: A computer-based mapping tool for analysis of restriction sites in multiple DNA sequences. Journal of Microbiological Methods. 69(2):411-413.
Gotts NM.  2007.  Resilience, panarchy and world-systems analysis. Ecology and Society. 12(1):24.
Le Duc MG, Pakeman RJ, Marrs RH.  2007.  A restoration experiment on moorland infested by Pterdium aquilinum: Plant species responses. Agriculture, Ecosystems and Environment. 119(1-2):53-59.
Pedersen ML, Friberg N, Skriver J, Baattrup-Pedersen A, Larsen SE.  2007.  Restoration of Skjern River and its valley: short-term effects on river habitats, macrophytes and macroinvertebrates. Ecological Engineering. 30(2):145-156.
Paterson E, Gebbing T, Abel C, Sim A, Telfer G.  2007.  Rhizodeposition shapes rhizosphere microbial community structure in organic soil. New Phytologist. 173(3):600-610.
Stutter MI, Langan SJ, Demars BOL.  2007.  River sediments provide a link between catchment pressures and ecological status in a mixed land use Scottish river system. Water Research. 41(12):2803-2815.
Paquette SR, Behncke SM, O'Brien SH, Brenneman RA, Louis EE, Lapointe FJ.  2007.  Riverbeds demarcate distinct conservation units of the radiated tortoise (Geochelone radiata) in southern Madagascar. Conservation Genetics. 8(4):797-807.
Bastias BA, Anderson IC, Xu Z, Cairney WG.  2007.  RNA- and DNA-based profiling of soil fungal communities in a native Australian eucalypt forest and adjacent Pinus elliotti plantation. Soil Biology and Biochemistry. 39(12):3108-3114.
Helliwell RC, Coull MC, Evans CD, Davies JJL, Norris D, Ferrier RC, Jenkins A, Reynolds B.  2007.  The role of catchment characteristics in determining surface water nitrogen in four upland regions in the UK. Hydrology and Earth System Sciences. 11(1):356-371.
Pakeman RJ, Quested HM.  2007.  Sampling plant functional traits: what proportion of the species need to be measured? Applied Vegetation Science. 10(1):91-96.
Demars BOL, Edwards AC.  2007.  A seasonal survey of surface water habitats within the River Spey basin, Scotland: major nutrient properties. Aquatic Conservation: Marine and Freshwater Ecosystems. 17(6):565-583.
Fleurance G, Duncan P, Fritz H, Cabaret J, Cortet J, Gordon IJ.  2007.  Selection of feeding sites by horses at pasture: Testing the anti-parasite theory. Applied Animal Behaviour Science. 108(3-4):288-301.
Polhill JG, Pignotti E, Gotts NM, Edwards P, Preece A.  2007.  A semantic grid service for experimentation with an agent-based model of land use change. Journal of Artificial Societies and Social Simulation.. 10(2):2.
Matthiopoulos J, Graham K, Smout S, Asseburg C, Redpath S, Thirgood SJ, Hudson P, Harwood J.  2007.  Sensitivity to assumptions in models of generalist predation on a cyclic prey. Ecology. 88(10):2576-2586.
Carranza J, Perez-Barberia FJ.  2007.  Sexual selection and senescence: Male size-dimorphic ungulates evolved relatively smaller molars than females. American Naturalist. 170(3):370-380.
Freppaz M, Williams BL, Edwards AC, Scalenghe R, Zanini E.  2007.  Simulating soil freeze/thaw cycles typical of early and late winter alpine conditions: implications for N and P availability. Applied Soil Ecology. 35(1):247-255.
Aherne J, Helliwell RC, Lilly A, Ferrier RC, Jenkins A.  2007.  Simulation of soil and surface water acidification: Divergence between one-box and two-box models? Applied Geochemistry. Special Issue on Acid Rain2005, 7th International Conference on Acid Deposition, June 12-17th 2005, Prague, Czech Republic.. 22(6):1167-1173.
Evans KL, Lennon JJ, Gaston KJ.  2007.  Slopes of avian species - area relationships, human population density, and environmental factors. Avian Conservation and Ecology, Ecologie et Conservation des Oiseaux 2(2): 7..
Hewitson LA, Gordon IJ, Dumont B.  2007.  Social context affects patch-leaving decisions of sheep in a variable environment. Animal Behaviour. 74(2):239-246.
Slee B.  2007.  Social indicators of multifunctional rural land use: the case of forestry in the UK. Agriculture, Ecosystems and Environment. 120(1):31-40.
Hough RL.  2007.  Soil and human health: an epidemiological review. European Journal of Soil Science. 58(5):1200-1212.
Jensen OP, Barbara BJ, Magnuson JJ, Card VM, Futter MN, Soranno PA, Stewart KM.  2007.  Spatial analysis of ice phenology trends across the Laurentian Great Lakes region during a recent warming period. Limnology and Oceanography. 52:2013-2026.
Helliwell RC, Davies JJL, Jenkins A, Evans CD, Coull MC, Reynolds B, Norris D, Ferrier RC.  2007.  Spatial and seasonal variations in nitrogen leaching and acidity across four acid-impacted regions of the UK. Water, Air and Soil Pollution. 185(1-4):3-19.
Aitkenhead-Peterson JA, Smart RP, Aitkenhead MJ, Cresser MS, McDowell WH.  2007.  Spatial and temporal variation of dissolved organic carbon export from gauged and ungauged watersheds of Dee Valley, Scotland: Effect of land cover and C:N. Water Resources Research article no. W05442.. 43(5)
Kerlin D, Haydon D, Miller D, Aebischer N, Smith A, Thirgood SJ.  2007.  Spatial synchrony in red grouse population dynamics. Oikos. 116(12):2007-2016.
Gaston KJ, Davies RC, David C, Orme L, Olson VA, Thomas GH, Ding TS, Rasmussen PC, Lennon JJ, Bennett PM et al..  2007.  Spatial turnover in the global avifauna. Proceedings of the Royal Society of London, B. 274(1618):1567-1574.
Garnier E, Ansquer P, Castro H, Cruz P, Dolezal J, Eriksson O, Fortunel C, Freitas H, Golodets C, Grigulis C et al..  2007.  A standardized methodology to assess the effects of land use change on plant traits, communities and ecosystem functioning in grasslands. Annals of Botany. 99(5):967-985.
Eaton MA, Marshall KB, Gregory RD.  2007.  The status of Capercaillie, Tetrao urogallus, in Scotland in the winter 2003-04. Bird Study. 54:145-153.
Lutz E, Birkeland KW, Kronholm K, Hansen K, Aspinall RJ.  2007.  Surface hoar characteristics derived from a snow micropenetrometer using moving window statistical operations. Cold Regions Science and Technology. 47(1-2):118-133.
Small LA.  2007.  Sustainable (rural) livelihoods: a critical review. Canadian Journal of Development Studies. 28:27-38.
Fischer A, Petersen L, Feldkoetter C, Huppert W.  2007.  Sustainable governance of natural resources and institutional change - an analytical framework. Public Administration and Development. 27(2):123-137.
Stutter MI, Lumsdon DG, Cooper RJ.  2007.  Temperature and soil moisture effects on dissolved organic matter release from a moorland Podzol O horizon under field and controlled laboratory. European Journal of Soil Science. 58(5):1007-1016.
Ghorbani J, Le Duc MG, McAllister HA, Pakeman RJ, Marrs RH.  2007.  Temporal responses of propagule banks during ecological restoration in the UK. Restoration Ecology. 15(1):103-117.
Demars BOL, Edwards AC.  2007.  Tissue nutrient concentrations in freshwater aquatic macrophytes: high inter-taxon differences and low phenotypic response to nutrient supply. Freshwater Biology. 52(22):2073-2086.
Osler GHR, Sommerkorn M.  2007.  Towards a complete soil C and N cycle: incorporating the soil fauna. Ecology. 88:1611-1621.
Steffan-Dewenter I, Kessler M, Barkmann J, Bos MM, Buchori D, Erasmi S, Faust H, Gerold G, Glenk K, Gradstein SR et al..  2007.  Tradeoffs between income, biodiversity, and ecosystem functioning during tropical rainforest conversion and agroforestry intensification. Proceedings of the National Academy of Sciences of the United States of America. 104(12):4973-4978.
Howard BJ, Beresford NA, Gashchak S, Arkhipov A, Mayes RW, Caborn J, Stromann G, Wacker L.  2007.  The transfer of 239/240Pu to cow milk. Journal of Environmental Radioactivity. 98(1-2):191-204.
Howard BJ, Beresford NA, Mayes RW, Lamb CS, Barnett CL.  2007.  The transfer of different forms of 35S to goat milk. Journal of Environmental Radioactivity. 98(1-2):177-190.
Beresford NA, Mayes RW, Barnett CL, Howard BJ.  2007.  The transfer of radiocaesium to ewes through a breeding cycle - an illustration of the pitfalls of the transfer coefficient. Journal of Environmental Radioactivity. 98(1-2):24-35.
Beresford NA, Howard BJ, Mayes RW, Lamb CS.  2007.  The transfer of radionuclides from saltmarsh vegetation to sheep tissues and milk. Journal of Environmental Radioactivity. 98(1-2):36-49.
Izquierdo LR, Izquierdo SS, Gotts NM, Polhill JG.  2007.  Transient and asymptotic dynamics of reinforcement learning in games. Games and Economic Behavior. 61(2):259-276.
Pedersen ML, Friberg N.  2007.  Two lowland stream riffles - linkages between physical habitats and macroinvertebrates across multiple spatial scales. Aquatic Ecology. 41(3):475-490.
Williams DL, Goddard PJ, Brancker WM.  2007.  Ultrasonographic examination of ocular lesions in farmed halibut. Veterinary Journal. 173(2):456-458.
Kirk EA, Reeves AD, Blackstock KL.  2007.  Understanding environmental regulation: disciplinary interactions and path dependency. Environment and Planning C. 25:250-268.
Fischer A, Young J.  2007.  Understanding mental constructs of biodiversity - implications for biodiversity management and conservation. Biological Conservation. 136(2):271-282.
Brown KM.  2007.  Understanding the materialities and moralities of property: reworking collective claims to land. Transactions of the Institute of British Geographers. 32(4):507-522.
Newey SJ, Dahl F, Willebrand T, Thirgood SJ.  2007.  Unstable dynamics and population regulation in mountain hares: a review. Biological Reviews. 82(4):527-549.
Moseley MH, Marriott L, Nettleton P, Dukes J, Irvine RJ, Mougoet F.  2007.  Use of real-time RT-PCR to determine the prevalence of louping ill virus in live red grouse chicks. Veterinary Record. 161:660-661.
Smith DG, Mayes RW, Hollands T, Cuddeford D, Yule HH, Ladrero CMM, Gillen E.  2007.  Validating the alkane pair technique to estimate dry matter intake in equids. Journal of Agricultural Science. 145:273-281.
Thirgood SJ, Mduma SAR, Keyyu JD, Laurenson MK.  2007.  The value of long-term research: conservation science and practice in Tanzania. Conservation Biology. 21(3):576-579.
Brewer MJ, Nolan AJ.  2007.  Variable smoothing in Bayesian intrinsic autoregressions. Environmetrics. 18(8):841-857.
Bishop ID, Miller DR.  2007.  Visual assessment of off-shore wind turbines: the influence of distance, contrast, movement and social variables. Renewable Energy. 32(5):814-831.
Dullinger S, Kleinbauer I, Pauli H, Gottfried M, Brooker RW, Nagy L, Theurillat JP, Holten JI, Abdaladze O, Benito JL et al..  2007.  Weak and variable relationships between environmental severity and small-scale co-occurrence in alpine plant communities. Journal of Ecology. 95(6):1284-1295.
Perez-Barberia FJ, Robertson E, Soriguer R, Aldezabal A, Mendizabal M.  2007.  Why polygynous ungulates segregate in space? Testing the activity budget hypothesis in Soay sheep Ecological Monographs. 77(4):631-647.
Gilbert L, Bulmer E, Arnold KE, Graves JA.  2007.  Yolk androgens and embryo sex: maternal effects of confounding factors? Hormones and Behavior. 51(2):231-238.
George TS, Simpson RJ, Hadobas PA, Marshall DJ, Richardson AE.  2007.  Accumulation and phosphatase-lability of organic phosphorus in fertilised pasture soils. Australian Journal of Agricultural Research. 58:47-55. Abstract
Navajas EA, Lambe NR, McLean KA, Glasbey CA, Fisher AV, Charteris AJL, B L, Simm G.  2007.  Accuracy of in vivo muscularity indices measured by computed tomography and their associaton with carcass quality in lambs. Meat Science. 75:533-542. Abstract
Andersen MN, Sausse C, Lacroix B, Caul S, Mess A.  2007.  Agricultural studies of GM maize and the field experimental infrastructure of ECOGEN. Pedobiologia. 51:175-184. Abstract
Glasbey CA, van der Heijden GWAM.  2007.  Alignment and sub-pixel interpolation of images using Fourier methods. Journal of Applied Statistics. 34:217-230. Abstract
Kr E, Tups A, Archer ZA, Ross AW, Moar KM, Bell LM, Duncan JS, Mayer CD, Morgan PJ, Mercer JG et al..  2007.  Altered expression of SOCS3 in the hypothalamic arcuate nucleus during seasonal body mass changes in the field vole, Microtus agrestis. Journal of Neuroendocrinology. 19:83-94. Abstract
Novis PM, Whitehead D, Gregorich EG, Hunt JE, Sparrow AD, Hopkins DW, Elberling B, Greenfield LG.  2007.  Annual carbon fixation in terrestrial populations of Nostoc commune (Cyanobacteria) from an Antarctic dry valley is driven by temperature regime. Global Change Biology. 13:1224-1237. Abstract
McDougall GJ, Fyffe S, Dobson P, Stewart D.  2007.  Anthocyanins from red cabbage - stability to simulated gastrointestinal digestion. Phytochemistry. 68:1285-1294. Abstract
Ross HA, McDougall GJ, Stewart D.  2007.  Antiproliferative activity is predominantly associated with ellagitannins in raspberry extracts. Phytochemistry. 68:218-228. Abstract
Scagliarini A, McInnes CJ, Gallina L, Dal Pozza F, Scagliarini L, Snoeck R, Prosperi S, Sales J, Gilray JA, Nettleton PF.  2007.  Antiviral activity of HPMPC (cidofovir) against orf virus infected lambs. Antiviral Research. 73:169-174. Abstract
Bevan M, Waugh R.  2007.  Applying plant genomics to crop improvement. Genome Biology. 8:302-302. Abstract
Raven JA, Larkum AWD.  2007.  Are there ecological implications for the proposed energetic restrictions on photosynthetic oxygen evolution at high oxygen concentrations? Photosynthesis Research. 94:31-42. Abstract
Tetzlaff D, Waldron S, Brewer MJ, Soulsby C.  2007.  Assessing nested hydrological and hydrochemical behaviour of a mesoscale catchment using continuous tracer data. Journal of Hydrology. 336:430-443. Abstract
Squires J, Stephens J, Schoelz JE, Palukaitis P.  2007.  Assessment of CaMV-mediated gene silencing and integration of CaMV into GM plants with a 35S RNA promoter. Environmental Biosafety Research. 6:259-270. Abstract
Swanston JS, Smith PL, Gillespie TL, Brosnan JM, Bringhurst TA, Agu RC.  2007.  Associations between grain characteristics and alcohol yield among soft wheat varieties. Journal of the Science of Food and Agriculture. 87:676-683. Abstract
Raven JA.  2007.  Astrobiology: Photosynthesis in watercolours. Nature. 448:-418.
Sharma SK, Bryan GJ, Millam S.  2007.  Auxin pulse treatment holds the potential to enhance efficiency and practicability of somatic embryogenesis in potato. Plant Cell Reports. 26:945-950. Abstract
Ravensdale M, Blom TJ, Gracia-Garza JA, Svircev AM, Smith RJ.  2007.  Bacteriophages and the control of Erwinia carotovora subsp. carotovora. Canadian Journal of Plant Pathology. 29:121-130.
Forster BP, Franckowiak JD, Lundqvist U, Lyon J, Pitkethly I, Thomas WTB.  2007.  The barley phytomer. Annals of Botany. 100:725-733. Abstract
Hukkanen AT, Kokko HI, Buchala AJ, McDougall GJ, Stewart D, K SO, Karjalainen RO.  2007.  Benzothiadiazole induces the accumulation of phenolics and improves resistance to powdery mildew in strawberries. Journal of Agricultural and Food Chemistry. 55:1862-1870. Abstract
Sayanova O, Haslam R, Guschina I, Lloyd D, Christie WW, Harwood JL, Napier JA.  2007.  A bifunctional D12, D15-desaturase from Acanthamoeba castellanii directs the synthesis of highly unusual n-1 series unsaturated fatty acids. Journal of Biological Chemistry. 281:36533-36541. Abstract
Kuan HL, Hallett PD, Griffiths BS, Gregory AS, Watts CW, Whitmore AP.  2007.  The biological and physical stability and resilience of a selection of Scottish soils to stresses. European Journal of Soil Science. 58:811-821. Abstract
Williamson B, Tudzynski B, Tudzynski P, Van Kan JAL.  2007.  Botrytis cinerea: the cause of grey mould disease. Molecular Plant Pathology. 8:561-580. Abstract
Roberts K, Granum E, Leegood RC, Raven JA.  2007.  C3 and C4 pathways of photosynthetic carbon assimilation in marine diatoms are under genetic, not environmental, control. Plant Physiology. 145:230-235. Abstract
Kim S-H, Ryabov EV, Kalinina N, Rakitina DV, Gillespie T, MacFarlane SA, Haupt S, Brown JWS, Taliansky ME.  2007.  Cajal bodies and the nucleolus are required for a plant virus systemic infection. EMBO Journal. 26:2169-2179. Abstract
Roberts AMI, Theobold CM, McNeil M.  2007.  Calibration of quantitative PCR assays. Journal of Agricultural Biological and Environmental Statistics. 12:364-378. Abstract
Roberts K, Granum E, Leegood RC, Raven JA.  2007.  Carbon acquisition by diatoms. Photosynthesis Research. 93:79-88. Abstract
Reavy B, Bagirova S, Chichkova NV, Fedoseeva SV, Kim S-H, Vartapetian AB, Taliansky ME.  2007.  Caspase-resistant VirD2 protein provides enhanced gene delivery and expression in plants. Plant Cell Reports. 26:1215-1219. Abstract
Artz RRE, Anderson IC, Chapman SJ, Hagn A, Schloter M, Potts JM, Campbell CD.  2007.  Changes in fungal community composition in response to vegetational succession during the natural regeneration of cutover peatlands. Microbial Ecology. 54:508-522. Abstract
Woodhall JW, Lees AK, Edwards SG, Jenkinson P.  2007.  Characterisation of Rhizoctonia solani from potato in Great Britain. Plant Pathology. 56:286-295. Abstract
Le Gall O, Sanfacon H, Ikegami M, Iwanami T, Jones AT, Karasev A, Lehto K, Wellink J, Wetzel T, Yoshikawa N.  2007.  Cheravirus and Sadwavirus: two unassigned genera of plant positive-sense single-stranded RNA viruses formerly considered atypical members of the genus Nepovirus (family Comoviridae). Archives of Virology. 152:1767-1774.
Mazzitelli L, Hancock RD, Haupt S, Walker PG, Pont SDA, McNicol JW, Cardle L, Morris J, Viola R, Brennan RM et al..  2007.  Co-ordinated gene expression during phases of dormancy release in raspberry (Rubus idaeus L.) buds.. Journal of Experimental Botany. 58:1035-1045. Abstract
Coates EM, Popa G, Gill CIR, McCann M, McDougall GJ, Stewart D, Rowland I.  2007.  Colon-available raspberry extract exhibit anti-cancer effects on in vitro models of colon cancer. Proceedings of the Nutrition Society. 66:67A-67A.
Coates EM, Popa G, Gill CIR, McCann MJ, McDougall GJ, Stewart D, Rowland I.  2007.  Colon-available raspberry polyphenols exhibit anti-cancer effects on in vitro models of colon cancer. Journal of Carcinogenesis. 6:1-13. Abstract
Glasbey CA, van der Heijden GWAM, Toh VFK, Gray A.  2007.  Colour displays for categorical images. Color Research and Application. 32:304-309. Abstract
Khondoker MR, Glasbey CA, Worton BJ.  2007.  A comparison of parametric and non-parametric methods for normalising cDNA microarray data. Biometrical Journal. 49:815-823. Abstract
Jones MR, Leith ID, Fowler D, Raven JA, Sutton MA, Nemitz E, Cape JN, Sheppard LJ, Smith RI, Theobold MR.  2007.  Concentration-dependent NH3 deposition processes for mixed moorland semi-natural vegetation. Atmospheric Environment. 41:2049-2060. Abstract
Jones MR, Leith ID, Fowler D, Raven JA, Sutton MA, Nemitz E, Cape JN, Sheppard LJ, Smith RI.  2007.  Concentration-dependent NH3 deposition processes for stomatal and non-stomatal moorland species. Atmospheric Environment. 41:8990-8994. Abstract
Sommerhalder RJ, McDonald BA, Zhan J.  2007.  Concordant evolution of mitochondrial and nuclear genomes in the wheat pathogen Phaeosphaeria nodurum. Fungal Genetics and Biology. 44:764-772. Abstract
Vanbergen AJ, Jones TH, Halls RS, Watt AD, Elston DA.  2007.  Consequences for a host-parasitoid interaction of host-plant aggregation, isolation and phenology. Ecological Entomology. 32:419-427. Abstract
Bown JL, Pachepsky E, Eberst A, Bausenwein U, Millard P, Squire GR, Crawford JW.  2007.  Consequences of intraspecific variation for the structure and function of ecological communities Part 1: Model development and predicted patterns of diversity. Ecological Modelling. 207:264-276. Abstract
Pachepsky E, Bown JL, Eberst A, Bausenwein U, Millard P, Squire GR, Crawford JW.  2007.  Consequences of intraspecific variation for the structure and function of ecological communities Part 2: Linking diversity and function. Ecological Modelling. 207:277-285. Abstract
Sakvarelidze L, Tao Z, Bush M, Roberts GR, Leader DJ, Doonan JH, Rawsthorne S.  2007.  Coupling the GAL4 UAS system with alcR for versatile cell type-specific chemically inducible gene expression in Arabidopsis. Plant Biotechnology Journal. 5:465-476. Abstract
Beerling DJ, Hewitt CN, Pyle JA, Raven JA.  2007.  Critical issues in trace gas biogeochemistry and global change. Philosophical Transactions of the Royal Society A - Mathematical Physical and Engineering Sciences. 365:1629-1642. Abstract
Valentine TA, Randall E, Wypijewski K, Chapman S, Jones JT, Oparka KJ.  2007.  Delivery of macromolecules to plant parasitic nematodes using a tobacco rattle virus vector. Plant Biotechnology Journal. 5:827-834. Abstract
Cullen DW, Lees AK.  2007.  Detection of the nec1 virulence gene and its correlation with pathogenicity in Streptomyces species on potato tubers and in soil using conventional and realtime PCR. Journal of Applied Microbiology. 102:1082-1094. Abstract
Cullen DW, Toth IK, Pitkin Y, Boonham N, Walsh K, Barker I, Lees AK.  2007.  Development and validation of conventional and quantitative polymerase chain reaction assays for the detection of storage rot potato pathogens, Phytophthora erythroseptica, Pythium ultimum and Phoma foveata. Journal of Phytopathology. 155:309-315. Abstract
van Nugteren I, Hein I, Berger DK.  2007.  Development of a virus-induced gene silencing system in pearl millet. South African Journal of Botany. 73:339-339. Abstract
Woodhead M, Russell JR, Squirrell J, Hollingsworth PM, Cardle L, Gibby M, Powell W.  2007.  Development of EST-derived microsatellite markers for Arabidopsis lyrata subspecies petraea (L.). Molecular Ecology Notes. 7:631-634. Abstract
George TS, Simpson RJ, Gregory PJ, Richardson AE.  2007.  Differential interaction of Aspergillus niger and Peniophora lycii phytases with soil particles affects the hydrolysis of inositol phosphates. Soil Biology & Biochemistry. 39:793-803. Abstract
Tzortzakakis EA, Blok VC.  2007.  Differentiation in two populations of Meloidogyne incognita from Greece in relation to reproduction on resistant tomato and pepper. Journal of Plant Diseases and Protection. 114:276-277. Abstract
Solomon-Blackburn RM, Stewart HE, Bradshaw JE.  2007.  Distinguishing major-gene from field resistance to late blight (Phytophthora infestans) of potato (Solanum tuberosum) and selecting for high levels of field resistance. Theoretical and Applied Genetics. 115:141-149. Abstract
Mao X, Hu F, Griffiths BS, Chen XY, Liu M, Li H.  2007.  Do bacterial-feeding nematodes stimulate root proliferation through hormonal effects? Soil Biology & Biochemistry. 39:1816-1819. Abstract
Szarejko I, Forster BP.  2007.  Doubled haploidy and induced mutation. Euphytica. 158:359-370. Abstract
Zhang K, Greenwood DJ, White PJ, Burns IG.  2007.  A dynamic model for the combined effects of N, P and K fertilizers on yield and mineral composition; description and experimental test. Plant and Soil. 298:81-98. Abstract
El Zemrany H, Czarnes S, Hallett PD, Alamercery S, Bally R, Monrozier LJ.  2007.  Early changes in root characteristics of maize (Zea mays) following seed inoculation with the PGPR Azospirillum lipoferum CRT1. Plant and Soil. 291:109-118. Abstract
Krogh PH, Griffiths BS.  2007.  ECOGEN - Soil ecological and economic evaluation of genetically modified crops. Pedobiologia. 51:171-173. Abstract
Chope GA, Terry LA, White PJ.  2007.  The effect of 1-methylcyclopropene (1-MCP) on the physical and biochemical characteristics of onion cv. SS1 bulbs during storage. Postharvest Biology and Technology. 44:131-140. Abstract
Anthony J-P, Fyfe L, Stewart D, McDougall GJ, Smith HV.  2007.  The effect of blueberry extracts on Giardia duodenalis viability and spontaneous excystation of Cryptosporidium parvum oocysts, in vitro.. Methods. 42:339-348. Abstract
Andersen HS, Gambling L, Holtrop G, McArdle HJ.  2007.  Effect of dietary copper deficiency on iron metabolism in the pregnant rat. British Journal of Nutrition. 97:239-246. Abstract
Chope GA, Terry LA, White PJ.  2007.  The effect of the transition between controlled atmosphere and regular atmosphere storage on bulbs of onion cultivars SS1, Carlos and Renate. Postharvest Biology and Technology. 44:228-239. Abstract
Lehesranta SJ, Koistinen KM, Massat N, Davies HV, Shepherd LVT, McNicol JW, Cakmak I, Cooper J, Luck L, K SO et al..  2007.  Effects of agricultural production systems and their components on protein profiles of potato tubers. Proteomics. 7:597-604. Abstract
Griffiths DW, Dale MFB, Morris WL, Ramsay G.  2007.  Effects of season and postharvest storage on the carotenoid content of Solanum phureja potato tubers. Journal of Agricultural and Food Chemistry. 55:379-385. Abstract
Ravirala RS, Barabote RD, Wheeler DM, Reverchon S, Tatum O, Malouf J, Liu H, Pritchard L, Hedley PE, Birch PRJ et al..  2007.  Efflux pump gene expression in Erwinia chrysanthemi is induced by exposure to phenolic acids. Molecular Plant-Microbe Interactions. 20:313-320. Abstract
Johnson SN, Zhang X, Crawford JW, Gregory PJ, Young IM.  2007.  Egg hatching and survival time of soil-dwelling insect larvae: a partial differential equation model and experimental validation. Ecological Modelling. 202:493-502. Abstract
Shams-Bakhsh M, Canto T, Palukaitis P.  2007.  Enhanced resistance and neutralization of defense responses by suppressors of RNA silencing. Virus Research. 130:103-109. Abstract
Dziva F, Mahajan A, Cameron P, Currie C, McKendrick IJ, Wallis TS, Smith DGE, Stevens MP.  2007.  EspP, a type V-secreted serine protease of enterohaemorrhagic Escherichia coli O157:H7, influences intestinal colonization of calves and adherence to bovine primary intestinal epithelial cells. FEMS Microbiology Letters. 271:258-264. Abstract
Kvarnstr M, Glasbey CA.  2007.  Estimation of centres and radial intensity profiles of spherical nano-particles in digital microscopy. Biometrical Journal. 49:300-311. Abstract
Cook AR, Otten W, Marion G, Gibson GJ, Gilligan CA.  2007.  Estimation of multiple transmission rates for epidemics in heterogeneous populations. Proceedings of the National Academy of Sciences, USA. 104:20392-20397. Abstract
Cortet J, Griffiths BS, Bohanec M, Demsar D, Andersen MN, Caul S, Birch ANE, Pernin C, Tabone E, de Vaufleury A et al..  2007.  Evaluation of effects of transgenic Bt maize on microarthropods in a European multi-site experiment. Pedobiologia. 51:207-218. Abstract
Takle GW, Toth IK, Brurberg MB.  2007.  Evaluation of reference genes for real-time RT-PCR expresion studies in the plant pathogen Pectobacterium atrosepticum. BMC Plant Biology. 7:-50. Abstract
Watanabe T, Broadley MR, Jansen S, White PJ, Takada J, Satake K, Takamatsu T, Tuah SJ, Osaki M.  2007.  Evolutionary control of leaf element composition in plants. New Phytologist. 174:516-523. Abstract
Zazzo A, Harrison SM, Bahar B, Moloney AP, Monahan FJ, Scrimgeour CM, Schmidt O.  2007.  Experimental determination of dietary carbon turnover in bovine hair and hoof. Canadian Journal of Zoology. 85:1239-1248. Abstract
Usher KM, Bergman B, Raven JA.  2007.  Exploring cyanobacterial mutualisms. Annual Review of Ecology Evolution and Systematics. 38:255-273. Abstract
Grant OM, Tronina L, Jones HG, Chaves MM.  2007.  Exploring thermal imaging variables for the detection of stress responses in grapevine under different irrigation regimes. Journal of Experimental Botany. 58:815-825. Abstract
de Vaufleury A, Kramarz P, Binet P, Cortet J, Caul S, Andersen MN, Plumey E, Coeurdassier M, Krogh PH.  2007.  Exposure and effects assessments of Bt maize on non-target organisms (gastropod, microarthropods, mycorrhizal fungi) in a semi-field microcosm experiment. Pedobiologia. 51:185-194. Abstract
Kikuchi T, Aikawa T, Kosaka H, Pritchard L, Ogura N, Jones JT.  2007.  Expressed sequence tag (EST) analysis of the pine wood nematode Bursaphelenchus xylophilus and B. mucronatus. Molecular and Biochemical Parasitology. 155:9-17. Abstract
White PJ, Bowen HC, Marshall B, Broadley MR.  2007.  Extraordinarily high leaf selenium to sulfur ratios define "Se-accumulator" plants. Annals of Botany. 100:111-118. Abstract
Butler A, Heffernan JE, Tawn JA, Flather RA, Horsburgh KJ.  2007.  Extreme value analysis of decadal variations in storm surge elevations. Journal of Marine Systems. 67:189-200. Abstract
van de Graaf P, Wale S, Lees AK.  2007.  Factors affecting the incidence and severity of Spongospora subterranea infection and galling in potato roots. Plant Pathology. 56:1005-1013. Abstract
Lichner L, Hallett PD, Feeney D, Dugova O, Sir M, Tesar M.  2007.  Field measurement of soil water repellency and its impact on water flow under different vegetation. Biologia. 62:537-541. Abstract
Farmer NL, Ruffell A, Meier-Augenstein W, Meneely J, Kalin RM.  2007.  Forensic analysis of wooden safety matches - a case study. Science and Justice. 47:88-98. Abstract
Forster BP, Tuvesson S, Weyen J.  2007.  Foreword: Gametic cells and molecular breeding for crop improvement. Euphytica. 158:273-274. Abstract
Jing R, Johnson R, Seres A, Kiss G, Ambrose MJ, Knox MR, Ellis THN, Flavell AJ.  2007.  Gene-based sequence diversity analysis of field pea (Pisum). Genetics. 177:2263-2275. Abstract
Zhang X, Johnson SN, Crawford JW, Gregory PJ, Young IM.  2007.  A general random walk model for the leptokurtic distribution of organism movement: theory and application. Ecological Modelling. 200:79-88. Abstract
Hein I, McLean K, Chalhoub B, Bryan GJ.  2007.  Generation and screening of a BAC library from a diploid potato clone to unravel durable late blight resistance on linkage group IV. International Journal of Plant Genomics. :-51421. Abstract
Sanz AM, Gonzalez SG, Syed NH, Suso MJ, Salda CC, Flavell AJ.  2007.  Genetic diversity analysis in Vicia species using retrotransposon-based SSAP markers. Molecular Genetics and Genomics. 278:433-441. Abstract
Chesnay C, Kumar A, Pearce SR.  2007.  Genetic diversity of SIRE-1 retroelements in annual and perennial glycine species revealed using SSAP. Cellular and Molecular Biology Letters. 12:103-110. Abstract
M C, Crosley LK, Nicol F, Beckett GJ, Howie AF, Hill KE, Horgan GW, Mathers JC, Arthur JR, Hesketh JE.  2007.  Genetic polymorphisms in the human selenoprotein P gene determine the response of selenoprotein markers to selenium supplementation in a gender-specific manner (the SELGEN study). FASEB Journal. 21:3063-3074. Abstract
Hopkins DW, Webster EA, Boerjan W, Pilate G, Halpin C.  2007.  Genetically modified lignin belowground. Nature Biotechnology. 25:168-169. Abstract
Ramsey JS, Wilson ACC, de Vos M, Sun Q, Tamborindeguy C, Winfield A, Malloch G, Smith DM, Fenton B, Gray SM et al..  2007.  Genomic resources for Myzus persicae: EST sequencing, SNP identification, and microarray design. BMC Genomics. 8:-423. Abstract
Varshney RK, Marcel TC, Ramsay L, Russell JR, R MS, Stein N, Waugh R, Langridge P, Niks RE, Graner A.  2007.  A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics. 114:1091-1103. Abstract
Sims M, Elston DA, Larkham A, Nussey DH, Albon SD.  2007.  Identifying when weather influences life-history traits of grazing herbivores. Journal of Animal Ecology. 76:761-770. Abstract
Eaton SL, Rocchi M, Gonz L, Hamilton S, Finlayson J, Sales J, Jeffrey M, Steele PJ, Dagliesh MP, Rodger SM et al..  2007.  Immunological differences between susceptible and resistant sheep during the preclinical phase of scrapie infection. Journal of General Virology. 88:1384-1391. Abstract
Lobley GE, Bremner DM, Holtrop G, Johnstone AM, Maloney C.  2007.  Impact of high protein diets with either moderate or low carbohydrate on weight loss, body composition, blood pressure and glucose tolerance in rats. British Journal of Nutrition. 97:1099-1108. Abstract
Belenguer A, Duncan SH, Holtrop G, Anderson SE, Lobley GE, Flint HJ.  2007.  Impact of pH on lactate formation and utilization by human fecal microbial communities. Applied and Environmental Microbiology. 73:6526-6533. Abstract
Naylor SW, Nart P, Sales J, Flockhart A, Gally DL, Low JC.  2007.  Impact of the direct application of therapeutic agents to the terminal recta of experimentally colonized calves on Escherichia coli O157: H7 shedding. Applied and Environmental Microbiology. 73:1493-1500. Abstract
Sims M, Elston DA, Harris MP, Wanless S.  2007.  Incorporating variance uncertainty into a power analysis of monitoring designs. Journal of Agricultural Biological and Environmental Statistics. 12:236-249. Abstract
Singh BK, Munro S, Potts JM, Millard P.  2007.  Influence of grass species and soil type on rhizosphere microbial community structure in grassland soils. Applied Soil Ecology. 36:147-155. Abstract
Sales J, Vali L, Hoyle DV, Yates CM, Amyes SGB, McKendrick IJ.  2007.  The interaction between dam methylation sites and Xha1 restriction digest sites in Escherichia coli O157: H7 EDL933. Journal of Applied Microbiology. 102:820-825. Abstract
Kim S-H, MacFarlane SA, Kalinina NO, Rakitina DV, Ryabov E, Gillespie T, Haupt S, Brown JWS, Taliansky ME.  2007.  Interaction of a plant virus-encoded protein with the major nucleolar protein fibrillarin is required for systemic virus infection. Proceedings of the National Academy of Sciences, USA. 104:11115-11120.
Rommens CM, Haring MA, Swords K, Davies HV, Belknap WR.  2007.  The intragenic approach as a new extension to traditional plant breeding. Trends in Plant Science. 12:397-403. Abstract
Gilroy EM, Hein I, van der Hoorn R, Boevink P, Venter E, McLellan H, Kaffarnik F, Hrubikova K, Shaw J, Holeva MC et al..  2007.  Involvement of cathepsin B in the plant disease resistance hypersensitive response. Plant Journal. 52:1-13. Abstract
Andrews M, Raven JA, Sprent JI, Lea PJ.  2007.  Is shoot growth correlated to leaf protein concentration? Trends in Plant Science. 12:531-532. Abstract
Hancock RD, Walker PG, Pont SDA, Marquis N, Vivera S, Gordon SL, Brennan RM, Viola R.  2007.  L-Ascorbic acid accumulation in fruit of Ribes nigrum occurs by in situ biosynthesis via the L-galactose pathway. Functional Plant Biology. 34:1080-1091. Abstract
Allcroft DJ, Glasbey CA, Paulo MJ.  2007.  A latent Gaussian model for multivariate consumption data. Food Quality and Preference. 18:508-516. Abstract
Latijnhouwers M, Gillespie T, Boevink P, Hawes C, Carvalho C.  2007.  Localisation and domain characterisation of Arabidopsis Golgin Candidates. Journal of Experimental Botany. 58:4373-4386. Abstract
Mickovski SB, Bengough AG, Bransby MF, Davies MCR, Hallett PD, Sonnenberg R.  2007.  Material stiffness, branching pattern, and soil water matric potential affect the pullout resistance of model root systems. European Journal of Soil Science. 58:1471-1481. Abstract
Feuillet C, Langridge P, Waugh R.  2007.  Meeting Report: The Aaronsohn-ITMI International Conference. Israel Journal of Plant Sciences. 55:315-319.
Stewart D, McDougall GJ, Sungurtas J, Verrall SR, Graham J, Martinussen I.  2007.  Metabolomic approach to identifying bioactive compounds in berries: Advances toward fruit nutritional enhancement. Molecular Nutrition and Food Research. 51:645-651. Abstract
Griffiths BS, Caul S, Thompson J, Birch ANE, Cortet J, Andersen MN, Krogh PH.  2007.  Microbial and microfaunal community structure in cropping systems with genetically modified plants. Pedobiologia. 51:195-206. Abstract
Gibson T, Blok VC, Phillips MS, Hong G, Kumarasinghe D, Riley IT, Dowton M.  2007.  The mitochondrial subgenomes of the nematode Globodera pallida are mosaics: Evidence of recombination in an animal mitochondrial genome. Journal of Molecular Evolution. 64:463-471. Abstract
Rae SJ, Macaulay M, Ramsay L, Leigh F, Matthews D, O'Sullivan DM, Donini P, Morris PC, Powell W, Marshall DF et al..  2007.  Molecular barley breeding. Euphytica. 158:295-303. Abstract
Adam MAM, Phillips MS, Blok VC.  2007.  Molecular diagnostic key for identification of single juveniles of seven common and economically important species of root-knot nematode (Meloidogyne spp.). Plant Pathology. 56:190-197. Abstract
Morris WL, Ducreux LJM, Bryan GJ, Taylor MA.  2007.  Molecular dissection of sensory traits in the potato tuber. American Journal of Potato Research. 85:286-297. Abstract
Riga E, Karanastasi E, Oliveira CMG, Neilson R.  2007.  Molecular identification of two stubby root nematode species. American Journal of Potato Research. 84:161-167. Abstract
Dauwe R, Morreel K, Goeminne G, Gielen B, Rohde A, Van Beeumen J, Ralph J, Boudet AM, Kopka J, Rochange SF et al..  2007.  Molecular phenotyping of lignin-modified tobacco reveals associated changes in cell-wall metabolism, primary metabolism, stress metabolism and photorespiration. Plant Journal. 52:263-285.
Chaerle L, Leinonen I, Jones HG, van der Straeten D.  2007.  Monitoring and screening plant populations with combined thermal and chlorophyll fluorescence imaging. Journal of Experimental Botany. 58:773-784. Abstract
Jones HG.  2007.  Monitoring plant and soil water status: established and novel methods revisited and their relevance to studies of drought tolerance. Journal of Experimental Botany. 58:119-130. Abstract
Caumette G, Ouypornkochagorn S, Scrimgeour CM, Raab A, Feldmann J.  2007.  Monitoring the arsenic and iodine exposure of seaweed-eating North Ronaldsay sheep from the gestational and suckling periods to adulthood by using horns as a dietary archive. Environmental Science & Technology. 41:2673-2679. Abstract
Matheson LA, Loren A, Hanton SL, Rossi M, Latijnhouwers M, Stefano G, Renna L, Brandizzi F.  2007.  Multiple roles of ADP-ribosylation factor 1 in plant cells include spatially regulated recruitment of coatomer and elements of the golgi matrix. Plant Physiology. 143:1615-1627.
Wilson MR, Foucaud L, Barlwo PG, Hutchison GR, Sales J, Simpson RJ, Stone V.  2007.  Nanoparticle interactions with zinc and iron: Implications for toxicology and inflammation. Toxicology and Applied Pharmacology. 225:80-89. Abstract
Dietrich C, Miller J, McKenzie G, Palkovics L, Bal E, Palukaitis P, Maiss E.  2007.  No recombination detected between potyvirus mixed infections and between potyvirus derived transgenes and heterologous challenging potyviruses. Environmental Biosafety Research. 6:207-218. Abstract
Johnson SN, Crawford JW, Gregory PJ, Grinev DV, Mankin RW, Masters GJ, Murray PJ, Wall DH, Zhang X.  2007.  Non-invasive techniques for investigating and modelling root-feeding insects in managed and natural systems. Agricultural and Forest Entomology. 9:39-46.
Krishnarajah I, Marion G, Gibson G.  2007.  Novel bivariate moment-closure approximations. Mathematical Biosciences. 208:621-643. Abstract
Li X, Halpin C, Ryan MD.  2007.  A novel cleavage site within the potato leafroll virus P1 polyprotein. Journal of General Virology. 88:1620-1623. Abstract
Avrova AO, Whisson SC, Pritchard L, Venter E, de Luca S, Hein I, Birch PRJ.  2007.  A novel, non-protein-coding infection-specific gene family is clustered throughout the genome of Phytophthora infestans. Microbiology. 153:747-759. Abstract
Graham NS, Broadley MR, Hammond JP, White PJ, May ST.  2007.  Optimising the analysis of transcript data using high density oligonucleotide arrays and genomic DNA-based probe selection. BMC Genomics. 8:-344. Abstract
Cockell CS, Raven JA.  2007.  Ozone and life on the Archaean earth. Philosophical Transactions of the Royal Society A - Mathematical Physical and Engineering Sciences. 365:1889-1901. Abstract
Stamati K, Hollingsworth PM, Russell JR.  2007.  Patterns of clonal diversity in three species of sub-arctic willow (Salix lanata, Salix lapponum and Salix herbacea). Plant Systematics and Evolution. 269:75-88. Abstract
Judge J, Davidson RS, Marion G, White PCL, Hutchings MR.  2007.  Persistence of Mycobacterium avium subspecies paratuberculosis in rabbits: the interplay between horizontal and vertical transmission. Journal of Applied Ecology. 44:302-311. Abstract
Gregory AS, Watts CW, Whalley WR, Kuan HL, Griffiths BS, Hallett PD, Whitmore AP.  2007.  Physical resilience of soil to field compaction and the interactions with plant growth and microbial community structure. European Journal of Soil Science. 58:1221-1232. Abstract
Giordano M, Norici A, Gilmour DJ, Raven JA.  2007.  Physiological responses of the green alga Dunaliella parva (Volvocales, Chlorophyta) to controlled incremental changes in the N source. Functional Plant Biology. 34:925-934. Abstract
Kaplan IB, Lee L, Ripoll DR, Palukaitis P, Gildow FE, Gray SM.  2007.  Point mutations in the potato leafroll virus major capsid protein alter virion stability and aphid transmission. Journal of General Virology. 88:1821-1830. Abstract
Carfrae JA, Sheppard LJ, Raven JA, Leith ID, Crossley A.  2007.  Potassium and phosphorus additions modify the response of Sphagnum capillifolium growing on a Scottish ombrotrophic bog to enhanced nitrogen deposition. Applied Geochemistry. 22:1111-1121. Abstract
McCue KF, Allen PV, Shepherd LVT, Blake A, Maccree MM, Rockhold DR, Novy RG, Stewart D, Davies HV, Belknap WR.  2007.  Potato glycosterol rhamnosyltransferase, the terminal step in triose side-chain biosynthesis. Phytochemistry. 68:327-334. Abstract
Shepherd T, Dobson G, Verrall SR, Conner S, Griffiths DW, McNicol JW, Davies HV, Stewart D.  2007.  Potato metabolomics by GC-MS: what are the limiting factors? Metabolomics. 3:475-488. Abstract
Christie WW, Dobson G, Adlof RO.  2007.  A practical guide to the isolation, analysis and identification of conjugated linoleic acid. Lipids. 42:1073-1084. Abstract
Chope GA, Terry LA, White PJ.  2007.  Preharvest application of exogenous abscisic acid (ABA) or an ABA analogue does not affect endogenous ABA concentration of onion bulbs. Plant Growth Regulation. 52:117-129. Abstract
Laurenson K, McKendrick IJ, Reid HW, Challenor R, Mathewson GK.  2007.  Prevalence, spatial distribution and the effect of control measures on louping-ill virus in the Forest of Bowland, Lancashire. Epidemiology and Infection. 135:963-973. Abstract
Szili-Kovacs T, Torok K, Tilston EL, Hopkins DW.  2007.  Promoting microbial immobilization of soil nitrogen during restoration of abandoned agricultural fields by organic additions. Biology and Fertility of Soils. 43:823-828.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.