Publications list
A putative DEAD-box RNA-helicase is required for normal zoospore development in the late blight pathogen Phytophthora infestans. Fungal Genetics and Biology. 45:954-962. Abstract
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2008.
The 'Goldilocks Zone' of predation: the level of fox control needed to select predator resistance in a reintroduced mammal in Australia. Biodiversity and Conservation. Published online..
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2021.
The 'mother knows best' principle: should soil insects be included in the preference-performance debate? Ecological Entomology. 31:395-401. Abstract
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2006.
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2012.
(De-) legitimising hunting - discourses over the morality of hunting in Europe and Eastern Africa. Land Use Policy. 32:261-270.
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2013.
(Poly)phenol metabolites from Arbutus unedo leaves protect yeast from oxidative injury by activation of antioxidant and protein clearance pathways. Journal of Functional Foods. 32:333-346.
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2017.
(Poly)phenol-digested metabolites modulate alpha-synuclein toxicity by regulating proteostasis. Scientific Reports. 8:ArticleNo.6965..
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2018.
(Poly)phenols protect from alpha-synuclein toxicity by reducing oxidative stress and promoting autophagy. Human Molecular Genetics. 24:1717-1732.
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2015.
13C and 15N natural abundances of urban soils and herbaceous vegetation in Karlsruhe, Germany. European Journal of Soil Science. 56:607-620. Abstract
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2005.
The 172 kb genomic DNA region of the O. rufipogon ylg1.1 locus: comparative sequence analysis with O. sativa ssp. japonica and O. sativa ssp. indica. Functional & Integrative Genomics. 9:97-108.
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2009.
The 2015 Bioinformatics Open Source Conference (BOSC 2015). PLoS Computational Biology. 12:e1004691.
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2016.
25 years of protest: migration control and the power of local activism. Geography. 104:134-140.
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2019.
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2016.
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2008.
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2011.
2H stable isotope analysis of human tooth enamel: a new tool for forensic human provenancing? Rapid Communications in Mass Spectrometry. 25:910-916.
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2011.
3D deformation field in growing plant roots reveals both mechanical and biological responses to axial mechanical forces. Journal of Experimental Botany. 67:5605-5614.
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2016.
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2021.
The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies. Journal of Biomedical Semantics. 4
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2013.
The ABA-Insensitive-4 (AB14) transcription factor links redox, hormone and sugar signalling pathways (Review). Plant Signaling and Behavior. 7:276-281.
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2012.
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2009.
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2005.
Aboriginal rangers' perspectives on feral pigs: are they a pest or a resource? A case study in the wet tropics world heritage area of Northern Queensland Journal of Australian Indigenous Issues. 15:2-19.
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2012.
Above- and below-ground competition effects of two heathland species: Implications for growth and response to herbivory in birch saplings. Basic and Applied Ecology. 9(1):55-66.
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2008.
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2013.
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2006.
Aboveground-belowground herbivore interactions: a meta-analysis. Ecology. 93:2208-2215.
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2012.
Absence of Curli in soil-persistent Escherichia coli is mediated by a C-di-GMP signaling defect and suggests evidence of biofilm-independent niche specialization. Frontiers in Microbiology. 9:ArticleNo.1340.
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2018.
Absorption efficiencies and basal turnover of C, N and fatty acids in a marine Calanoid copepod. Functional Ecology. 25:509-518.
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2011.
Accelerating root system phenotyping of seedlings through a computer-assisted processing pipeline. Plant Methods. 13:ArticleNo.57.
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2017.
Acclimation, adaptation, traits and trade-offs in plankton functional type models: reconciling terminology for biology and modelling. Journal of Plankton Research. 37:683-691.
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2015.
Accounting for false positive detection error induced by transient individuals. Wildlife Research. 40:490-498.
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2013.
Accounting for the assimilative capacity of water systems in Scotland. Water. 9:ArticleNo.559.
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2017.
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2014.
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2012.
Accumulation and phosphatase-lability of organic phosphorus in fertilised pasture soils. Australian Journal of Agricultural Research. 58:47-55. Abstract
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2007.
Accumulation of endocrine disrupting compounds in sheep fetal and maternal liver tissue following exposure to pastures treated with sewage sludge. Journal of Environmental Monitoring. 11(8):1469-1476.
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2009.
Accumulation of potassium, rubidium and caesium (133Cs and 137Cs) in various fractions of soil and fungi in a Swedish forest. The Science of the Total Environment. 408:2543-2548.
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2010.
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2018.
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2007.
Achievements in and future prospects for molecular diagnostics for plant-parasitic nematodes. Canadian Journal of Plant Pathology. 27:176-185. Abstract
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2005.
Achieving dietary recommendations and reducing greenhouse gas emissions: modelling diets to minimise the change from current intakes. International Journal of Behavioral Nutrition and Physical Activity. 13
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2016.
Achieving on-farm practice change through facilitated group learning: evaluating the effectiveness of monitor farms and discussion groups. Journal of Rural Studies. 56:1-11.
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2017.
Acid-extractable potassium in agricultural soils: Source minerals according by differential and quantitative x-ray diffraction. Journal of Plant Nutrition and Soil Science. 176:407-419.
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2013.
Acidophilic denitrifiers dominate the N2O production in a 100-year-old tea orchard soil. Environmental Science and Pollution Research. 22:4173-4182.
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2015.
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2011.
Acquisition and metabolism of carbon in the Ochrophyta other than diatoms. Philosophical Transactions of the Royal Society B, Biological Sciences. 378:ArticleNo.20160400.
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2017.
Activation of hatching in diapaused and quiescent Globodera pallida. Parasitology. 140:445-454.
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2013.
Active water transport in unicellular algae: where, why, and how. Journal of Experimental Botany. 65:6279-6292.
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2014.
Activity and structure of methanotrophic communities in landfill cover soils. Environmental Microbiology and Environmental Microbiology Reports. 1:414-423.
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2009.
Activity energy expenditure is an independent predictor of energy intake in humans. International Journal of Obesity. 43:1466-1474.
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2019.
Activity pattern of arctic reindeer in a predator-free environment - no need to keep a daily rhythm. Oecologia. 152(4):617-624.
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2007.
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2015.
Acute toxicity of high doses of the glycoalkaloids, . Journal of Agricultural and Food Chemistry. 56:8753-8760. Abstract
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2008.
Adaptation assessments for crop production in response to climate change in Cameroon. Agronomy for Sustainable Development.. 29(2):247-256.
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2009.
Adaptation assessments for crop production in response to climate change in Cameroon. African Journal of Plant Science and Biotechnology. 2:10-17.
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2008.
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2012.
Adaptation of water resources systems to changing society and environment: a statement by the International Association of Hydrological Sciences. Hydrological Sciences Journal. 61:2803-2817.
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2016.
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2021.
Adaptation response surfaces for managing wheat under perturbed climate and CO2 in a Mediterranean environment. Agricultural Systems. Published online..
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2017.
Adaptation response surfaces for managing wheat under perturbed climate and CO2 in a Mediterranean environment. Agricultural Systems. Published online..
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2017.
Adaptation response surfaces for managing wheat under perturbed climate and CO2 in a Mediterranean environment. Agricultural Systems. 159:260-274.
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2018.
Adaptation response surfaces for managing wheat under perturbed climate and CO2 in a Mediterranean environment. Agricultural Systems. 159:260-274.
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2018.
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2013.
Adapting crops and cropping systems to future climates to ensure food security: the role of crop modelling. Global Food Security. 2:24-28.
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2013.
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2020.
Adapting scenarios for climate adaptation: Practitioners’ perspectives on a popular planning method. Environmental Science and Policy. 104:13-19.
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2020.
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2012.
Adding ‘iterativity’ to the credibility, relevance, legitimacy: A novel scheme to highlight dynamic aspects of science-policy interfaces. Environmental Science and Policy. 54:505-512.
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2015.
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2013.
Addition of fructose to the maize hyphosphere increases phosphatase activity by changing bacterial community structure. Soil Biology and Biochemistry. 142:ArticleNo.107724.
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2020.
Additive impacts of nitrogen deposition and grazing on a mountain moss-sedge heath. Botanica Helvetica.. 120(2):129-137.
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2010.
Addressing "nature-deficit disorder": a mixed methods pilot study of young adults attending a wilderness camp. Evidence based Complimentary and Alternative Medicine. Article No. 651827
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2015.
Addressing gender imbalances in animal conservation. Animal Conservation. 16:131-133.
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2013.
Adopting soil organic carbon management practices in soils of varying quality: implications and perspectives in Europe. Soil and Tillage Research. 165:95-106.
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2017.
ADS1 encodes a MATE-transporter that negatively regulates plant disease resistance. New Phytologist. 192:471-482.
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2011.
Adsorption of phosphate by halloysite (7 angstrom) nanotubes (HNTs). Clay Minerals. 55:184-193.
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2020.
Adsorptive removal of imidacloprid by potassium hydroxide activated magnetic sugarcane bagasse biochar: adsorption efficiency, mechanism and regeneration. Journal of Cleaner Production. 292:ArticleNo.126005.
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2021.
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2009.
Advances in functional genomics and genetic modification of potato (Review). Potato Research. 51:283-299. Abstract
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2008.
Advances in imaging RNA in plants. Trends in Plant Science. 15:196-203.
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2010.
Affective lives of rural ageing. Sociologia Ruralis. 58:213-234.
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2018.
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2013.
Afforestation for the provision of multiple ecosystem services: a Ukrainian case study. International Journal of Forestry Research, 2012, Article ID 295414, 12pp..
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2012.
Afforestation of moorland leads to changes in crenarchaeal community structure. FEMS Microbiology Ecology. 60(1):51-59.
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2007.
AFLP analysis of the genetic diversity of Meloidogyne chitwoodi and M. fallax, major agricultural pests. Comptes Rendus Biologies. 328:455-462. Abstract
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2005.
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2009.
African legumes: A vital but under-utilised resource. Journal of Experimental Botany. 61:1257-1265.
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2010.
The age of CO2 released from soils in contrasting ecosystems during the arctic winter. Soil Biology and Biochemistry. 63:1-4.
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2013.
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2016.
Aged riverine particulate organic carbon in four UK catchments. Science of the Total Environment. 536:648-654.
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2015.
Agenda-setting and power in collaborative natural resource management. Environmental Conservation. 41:311-320.
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2014.
Agent-based land use models: a review of applications. Landscape Ecology. 22(10):1447-1459.
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2007.
An agent-based model for simulating environmental behavior in an educational organization. Neural Processing Letters. 42:89-118.
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2015.
An agent-based model that simulates the spatio-temporal dynamics of sources and transfer mechanisms contributing faecal indictor organisms to streams. Part 1: Background and model description. Journal of Environmental Management. 270:ArticleNo.110903.
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2020.
An agent-based model to simulate meat consumption behaviour of consumers in Britain. Journal of Artificial Societies and Social Simulation. 22:ArticleNo.8.
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2019.
An agent-based modelling approach to evaluate factors influencing bioenergy crop adoption in north-east Scotland. Global Change Biology Bioenergy. 8:226-244.
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2016.
Agent-based modelling of foraging behaviour: the impact of spatial heterogeneity on disease risks from faeces in grazing systems. Journal of Agricultural Science. 146:507-520. Abstract
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2008.
Agent-based modelling of socio-ecological systems: Models, projects and ontologies. Ecological Complexity. 40:ArticleNo.100728.
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2019.
Agglomeration, accessibility, and productivity: evidence for large metropolitan areas in the US. Urban Studies. 54:179-195.
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2017.
Agglomeration, accessibility, and productivity: evidence for urbanized areas in the US. Urban Studies, Published online..
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2016.
Agri-environmental collaboratives as bridging organisations in landscape management. Journal of Environmental Management. 161:375-384.
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2015.
Agri-environmental collaboratives for landscape management in Europe. Current Opinion in Environmental Sustainability. 12:59-66.
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2015.
Agri-environmental diversification:linking environmental, forestry and renewable energy engagement on Scottish farms. Journal of Rural Studies. 47:10-20.
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2016.
Agricultural activities affect the pattern of the resistome within the phyllosphere microbiome in peri-urban environments. Journal of Hazardous Materials. 382:ArticleNo.121068.
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2020.
Agricultural studies of GM maize and the field experimental infrastructure of ECOGEN. Pedobiologia. 51:175-184. Abstract
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2007.
Agriculture and inequalities: Gentrification in a Scottish parish. Journal of Rural Studies. 68:240-250.
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2019.
Agriculture: Feeding the future. Nature. 499:23-24.
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2013.
Agritourism around the globe: Definitions, authenticity, and potential controversy. Journal of Agriculture, Food Systems, and Community Development, 10..
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2021.
Agritourism from the perspective of providers and visitors: a typology-based investigation. Tourism Management. 40:405.
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2014.
Agro-environmental project duration and effectiveness in South-East Asia. Outlook on Agriculture. 39(2):107-113.
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2010.
Agro-meteorological indices and climate model uncertainty over the UK. Climatic Change. 128:113-126.
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2015.
Agro-meteorological metrics for communicating climate change impacts to land managers. Aspects of Applied Biology. 88:85-91.
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2008.
Agrobacterium-mediated transformation of Solanum phureja. Plant Cell Reports. 24:10-14. Abstract
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2005.
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2011.
Agroecological practices for whole system sustainability. CABI Review, 16..
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2021.
Agronomic biofortification of cowpea with selenium: effects of selenate and selenite application on selenium and phytate concentrations in seeds. Journal of the Science of Food and Agriculture. 99:5969-5983.
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2019.
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2017.
The AKIS concept and its relevance in selected EU member states. Outlook on Agriculture.
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2015.
Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytologist. Published online..
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In Press.
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2019.
An aldo-keto reductase with 2-keto-l-gulonate reductase activity functions in l-tartaric acid biosynthesis from vitamin C in Vitis vinifera. Journal of Biological Chemistry. 294:15932-15946.
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2019.
Algae. Current Biology. 24:R590-R595.
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2014.
Algae as nutritional and functional food sources: revisiting our understanding. Journal of Applied Phycology. 29:949-982.
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2017.
Algae influence the hydrophysical parameters of a sandy soil. Catena. 108:58-68.
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2013.
Algae lacking carbon concentrating mechanisms. Canadian Journal of Botany. 83:879-890.
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2005.
Algal and aquatic plant carbon concentrating mechanisms in relation to environmental change. Photosynthesis Research. 109:281-296.
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2011.
Algal biogeography: metagenomics shows distribution of a picoplanktonic pelagophyte. Current Biology. 22:R682-R683.
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2012.
Algal evolution in relation to atmospheric CO2: carboxylases, carbon-concentrating mechanisms and carbon oxidation cycles. Philosophical Transactions of the Royal Society, B. 367:493-507.
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2012.
The algal revolution. Trends in Plant Science. 22:726-738.
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2017.
An algorithm for the simulation of the growth of root systems on deformable domains. Journal of Theoretical Biology. 310:164-174.
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2012.
Alignment and sub-pixel interpolation of images using Fourier methods. Journal of Applied Statistics. 34:217-230. Abstract
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2007.
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2012.
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2019.
An alkane sulfonate monooxygenase is required for symbiotic nitrogen fixation by Bradyrhizobium diazefficiens (syn. Bradyrhizobium japonicum) USDA110(T). Applied and Environmental Microbiology. 85:ArticleNo.e01552-19.
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2019.
Allele mining in barley genetic resources reveals genes of race-non-specific powdery mildew resistance. Frontiers in Plant Science. 2:113.
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2012.
Allele mining in barley genetic resources reveals genes of race-nonspecific powdery mildew resistance. Frontiers in Plant Science: Plant Nutrition. 2:e113.
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2011.
Allelic diversity of S-RNase alleles in diploid potato species. Theoretical and Applied Genetics. 129:1985-2001.
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2016.
An allelic series reveals essential roles for FY in plant development in addition to flowering-time control. Development. 132:3597-3607. Abstract
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2005.
Allelic variation at Fr-H1/Vrn-H1 and Fr-H2 loci is the main determinant of frost tolerance in spring barley. Environmental and Experimental Botany. 106:148-155.
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2014.
Allelomimetic synchronisation in merino sheep. Animal Behaviour. 74(5):1443-1454.
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2007.
Allometry and stoichiometry of unicellular, colonial and multicellular phytoplankton. New Phytologist. 181:295-309.
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2009.
Allowing for uncertainty in exogenous shocks to CGE models: the case of a new renewable energy sector. Economic Systems Research, Published online..
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2017.
Allowing for uncertainty in exogenous shocks to CGE models: the case of a new renewable energy sector. Economic Systems Research. 29:509-527.
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2017.
Alperujo extract, hydroxytyrosol, and 3,4-dihydroxyphenylglycol are bioavailable and have antioxidant properties in vitamin e-deficient ratsua proteomics and network analysis approach. Molecular Nutrition and Food Research. 56:1131-1147.
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2012.
Alpine cushion plants inhibit the loss of phylogenetic diversity in severe environments. Ecology Letters. 16:478-486.
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2013.
Alteration and resilience of the soil microbial community following compost amendment: effects of compost level and compost-borne microbial community. Environmental Microbiology. 8(2):247-257.
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2006.
Alteration of enzyme activities and functional diversity of a soil contaminated with copper and arsenic. Ecotoxicology and Environmental Safety. 192:ArticleNo.110264.
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2020.
Alteration of the carbon and nitrogen stable isotope composition of beef by substitution of grass silage with maize silage. Rapid Communications in Mass Spectrometry. 19:1937-1942. Abstract
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2005.
Altered expression of SOCS3 in the hypothalamic arcuate nucleus during seasonal body mass changes in the field vole, Microtus agrestis. Journal of Neuroendocrinology. 19:83-94. Abstract
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2007.
Altered food web structure and C-flux pathways associated with mineralisation of organic amendments to agricultural soil. Applied Soil Ecology. 48:107-116.
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2011.
Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis. Nucleic Acids Research. 40:2454-2469.
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2012.
Alternative splicing at the intersection of biological timing, development, and stress responses. The Plant cell. 25:3640-3656.
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2013.
Alternative splicing in plants. Biochemical Society Transactions. 36:508-510.
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2008.
Alternative splicing in plants - coming of age. Trends in Plant Science. 17:616-623.
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2012.
Alternative splicing mediates responses of the Arabidopsis thaliana circadian clock to temperature changes. The Plant Cell. 24:961-981.
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2012.
Alternative splicing of circadian clock genes correlates with temperature in field-grown sugarcane. Frontiers in Plant Science. 10:ArticleNo.1614..
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2019.
Alternative splicing of mini-exons in the Arabidopsis leaf rust receptor-like kinase LRK10 genes affects subcellular localisation. Plant Cell Reports. 34:495-505.
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2015.
An alternative to farmer age as an indicator of life-cycle stage: The case for a farm family age index. Journal of Rural Studies. 22(4):485-492.
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2006.
An alternative to killing? Treating wildlife to protect a valuable species from a shared parasite Parasitology. 140:247-257.
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2013.
An alternative to radiation hybrid mapping for large-scale genome analysis in barley. Molecular Genetics and Genomics. 274:589-594. Abstract
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2005.
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2010.
Ambiguous genetic relationships among coconut (Cocos nucifera L.) cultivars: the effects of outcrossing, sample source and size, and method of analysis. Genetic Resources and Crop Evolution. 57:203-217.
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2010.
Amino acid composition of grape (Vitis vinifera L.) juice in response to applications of urea to the soil or foliage. American Journal of Enology and Viticulture. 67:47-55.
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2016.
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2019.
AMOchar: Amorphous manganese oxide coating of biochar improves its efficiency at removing metal(loid)s from aqueous solutions. Science of the Total Environment. 625:71-78.
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2018.
Among population differentiation at nuclear genes in native Scots pine (Pinus sylvestris L.) in Scotland. Flora - Morphology, Distribution, Functional Ecology of Plants. 208:79-96.
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2013.
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2014.
Amplification of chloroplast DNA using the polymerase chain reaction (PCR): a practical activity for secondary school students. Journal of Biological Education. 40:172-177. Abstract
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2006.
Anaerobic digestion of feedstock grown on marginal land: break-even electricity prices. Energies. 10:ArticleNo.1416.
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2017.
Anaerobic digestion of food waste for bio-energy production in China and Southeast Asia: A review. Renewable and Sustainable Energy Reviews. 133:ArticleNo.110138.
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2020.
The anaerobic digestion of solid organic waste. Waste Management. 31:1737-1744.
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2011.
Analysing decision behaviour in stated preference surveys: a consumer psychological approach. Ecological Economics. 61(2-3):303-314.
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2007.
Analysing public preferences for woodland integration with other land uses in rural landscapes in Scotland. Landscape and Urban Planning. 86(2-3):267-275.
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2008.
Analysing the contribution of component cultivars and cultivar combinations to malting quality, yield and disease in complex mixtures. Journal of the Science of Food and Agriculture. 88:2142-2152. Abstract
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2008.
Analysing the development of small-scale forestry in Central and Eastern Europe. Small Scale Forestry Journal. 209(8):159-174.
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2009.
Analysing the relationship between indicators of landscape complexity and preference. Environment and Planning B. 38:24-40.
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2011.
Analysing visual landscape complexity: theory and application. Landscape Research. 35(1):111-131.
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2010.
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2011.
Analysis of anthocyanin composition and content contained from grains of the Korean purple rice varieties by liquid chromatography with diode array detection and electrospray ionization/mass spectrometry (LC-DAD-ESI/MS). Korean Journal of International Agriculture. 22:267-272.
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2010.
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2005.
Analysis of coupled axial and lateral deformation of roots in soil. International Journal for Numerical and Analytical Methods in Geomechanics. 43:684-707.
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2019.
Analysis of emerging contaminants in sewage effluent and river water: comparison from spot and passive sampling. Analytica Chimica Acta. 607(1):37-44.
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2008.
Analysis of ESTs generated from inner bark tissue of an Acacia auriculiformis x Acacia mangium hybrid. Tree Genetics and Genomes. 7:143-152.
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2011.
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2009.
Analysis of Expressed Sequence Tags from the ectoparasitic nematode Xiphinema index. Nematology. 7:95-104. Abstract
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2005.
Analysis of fatty acids and fatty alcohols reveals seasonal and sex-specific changes in the diets of seabirds. Marine Biology. 160:987-999.
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2013.
Analysis of improvements in nitrogen use efficiency associated with 75 years of spring barley breeding. European Journal of Agronomy. 42:49-58.
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2012.
Analysis of meiosis and cell cycle genes of the facultatively asexual pea aphid, Acyrthosiphon pisum (Hemiptera: Aphididae). Insect Molecular Biology. 19 Supplement s2:229-239.
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2010.
Analysis of plant diversity with retrotransposon-based molecular markers. Heredity. 106:520-530.
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2011.
Analysis of RNA silencing in agroinfiltrated leaves of Nicotiana benthamiana and Nicotiana tabacum. Plant Molecular Biology. 59:647-661. Abstract
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2005.
Analysis of root growth from a phenotyping data set using a density-based model. Journal of Experimental Botany. 67:1045-1058.
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2016.
Analysis of root growth from a phenotyping data set using a density-based model. Journal of Experimental Botany.. 67:1045-1058.
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2016.
Analysis of spatio-temporal properties of stochastic systems using TSTL. ACM Transactions on Modeling and Computer Simulation. 29:ArticleNo.20.
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2019.
Analysis of survival and hatching transcriptomes from potato cyst nematodes, Globodera rostochiensis and G. pallida. Science Reports. 7:ArticleNo.3882.
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2017.
Analysis of the barley bract suppression gene Trd1. Theoretical and Applied Genetics. 125:33-45.
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2012.
Analysis of the distribution of marker classes in a genetic linkage map: A case study in Norway Spruce (Picea.abies Karst). Tree Genetics and Genomes. 1:93-102. Abstract
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2005.
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2014.
Analysis of time series data on agroecosystem vegetation using predictive clustering trees. Ecological Modelling. 222:2524-2529.
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2011.