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Euan James
I completed my PhD in Biological Sciences at the University of Dundee in 1990, and then over the next 10 years worked as a consultant in Brazil and the Philippines where I specialised in the localisation of N-fixing bacteria in sugarcane and rice using electron microscopy.
During my time in Brazil I also gained a strong interest in the legume-rhizobial symbioses, particularly their role in tropical ecosystems and agriculture, and co-wrote a NERC-funded project at the University of St Andrews on the functioning of legume symbioses in the Brazilian Pantanal wetlands.
My position prior to joining the James Hutton Institute was as an electron microscopist at the University of Dundee College of Life Sciences, where I also acted as Principal Investigator on a NERC-funded project “In search of beta-rhizobia: exploring the symbionts of Mimosa in Brazil.”
Current research interests
Plant electron microscopy: the ultrastructure of beneficial plant-bacterial interactions. I also specialise in immunolocalisation of both conventionally (chemically)- and cryo-fixed plant material.
Nitrogen fixation by legumes: Currently measuring biological nitrogen fixation (BNF) by field beans (Vicia faba) in an experimental rotation at the Centre for Sustainable Cropping (CSC), Balruddery Farm. This work is funded by the EU FP7 project Legume Futures.
Nitrogen fixation by non-legumes: I have recently edited a Special Issue of Plant and Soil on The role of biological nitrogen fixation by non-legumes in the sustainable production of food and biofuels. It includes 20 papers that were presented at the 12th International Symposium on Biological Nitrogen Fixation (BNF) with Non-Legumes which was held in Buzios, Rio de Janeiro, Brazil from 3-8 October 2010.
Past research
Identified the nature of the O2 regulation mechanism in legume nodules using electron microscopy.
Identified the mechanisms that allow flooding-tolerant legumes to fix N whilst flooded in both tropical and temperate ecosystems.
Confirmed the endophytic nature of several species of N-fixing bacteria in sugarcane and rice using light and electron microscopy.
Showed that a completely “new” (actually ancient) type of symbiont existed in legume nodules in tropical ecosystems that was unrelated to Rhizobium. These symbionts are now termed “Beta-rhizobia”.
Bibliography
- Young, J.P.W.; Moeskj?r, S.; Afonin, A.; Rahi, P.; Maluk, M.; James, E.K.; Cavassim, M.I.A.; Rashid, M.; Aserse, A.A.; Perry, B.J.; Wang, E.T.; Velazquez, E.; Andronov, E.E.; Tampakaki, A.; Flores Felix, J.D.; Rivas Gonzalez, R.; Youseif, S.H.; Lepetit, M.; Boivin, S.; Jorrin, B.; Kenicer, G.J.; Peix, A.; Hynes, M.F.; Ramirez-Bahena, M.H.; Gulati, A.; Tian, C-F. (2021) Defining the rhizobium leguminosarum species complex., Genes, 12, Article No. 111.
- Raittz, R.T.; Reginatto De Pierri, C.; Maluk, M.; Bueno Batista, M.; Carmona, M.; Junghare, M.; Faoro, H.; Cruz, L.M.; Battistoni, F.; de Souza, E.; de Oliverira Pedrosa, F.; Chen, W.-M.; Poole, P.S.; Dixon, R.A.; James, E.K. (2021) Comparative genomics provides insights into the taxonomy of Azoarcus and reveals separate origins of Nif genes in the proposed Azoarcus and Aromatoleum genera., Genes, 12, Article No. 71.
- Mavima, L.; Beukes, C.W.; Palmer, M.; De Meyer, S.E.; James, E.K.; Maluk, M.; Gross, E.; Bueno dos Reis Junior, F.; Avontuur, J.R.; Chan, W.Y.; Venter, S.N.; Steenkamp, E.T. (2021) Paraburkholderia youngii sp. nov. and 'Paraburkholderia atlantica' - Brazilian and Mexican Mimosa-associated rhizobia that were previously known as Paraburkholderia tuberum sv. Mimosae., Systematic and Applied Microbiology, 44, Article No. 126152.
- Unkovich, M.; Herridge, D.; James, E.K.; Giller, K.; Peoples, M.B. (2020) Reliable quantification of N-2 fixation by non-legumes remains problematic., Nutrient Cycling in Agroecosystems, 118, 223-225.
- Reis, V.M.; Alves, B.J.R.; Hartmann, A.; James, E.K.; Zilli, J.E. (2020) Beneficial microorganisms in agriculture: the future of plant growth-promoting rhizobacteria., Plant and Soil, 451, 1-3.
- Choudhary, S.; Tak, N.; Bissa, G.; Chouhan, B.; Choudhary, P.; Sprent, J.I.; James, E.K.; Gehlot, H.S. (2020) The widely distributed legume tree Vachellia (Acacia) nilotica subsp. indica is nodulated by genetically diverse Ensifer strains in India., Symbiosis, 80, 15-31.
- Vasconcelos, M.W.; Grusak, M.A.; Pinto, E.; Gomes, A.; Ferreira, H.; Balazs, B.; Centofanti, T.; Ntatsi, G.; Savvas, D.; Karkanis, A.; Williams, M.; Vandenberg, A.; Toma, L.; Shrestha, S.; Akaichi, F.; Barrios, C.O.; Gruber, S.; James, E.K.; Maluk, M.; Karkey, A.J.; Iannetta, P.P.M. (2020) The biology of legumes and their agronomic, economic, and social impact., In: Hasanuzzaman, M., Araujo, S. & Singh Gill, S. (eds.). The Plant Family Fabaceae: The Biology and Physiological Responses to Environmental Issues. Springer Nature, Singapre, Chapter 1, pp3-25.
- Estrada-de los Santos, P.; Palmer, M.; Steenkamp, E.T.; Maluk, M.; Beukes, C.; Hirsch, A.M.; James, E.K.; Venter, S.N. (2019) Trinickia dabaoshanensis sp. nov., a new name for a lost species., Archives of Microbiology, 201, 1313-1316.
- Temesgen, D.; Maluk, M.; James, E.K.; Iannetta, P.P.M.; Assefa, F. (2019) The functional characterisation of soybean (Glycine max L.) rhizospheric bacteria indigenous to Ethiopian soils., African Journal of Agricultural Research, 14, 1659-1673.
- Pastor-Bueis, R.; Sanchez-Canizares, C.; James, E.K.; Gonzalez-Andres, F. (2019) Formulation of a highly effective inoculant for common bean based on an autochthonous elite strain of rhizobium leguminosarum bv. phaseoli, and genomic-based insights into its agronomic performance., Frontiers in Microbiology, 10, Article No. 2724.
- Speck, J.J.; James, E.K.; Sugawara, M.; Sadowsky, M.J.; Gyaneshwar, P. (2019) An alkane sulfonate monooxygenase is required for symbiotic nitrogen fixation by Bradyrhizobium diazefficiens (syn. Bradyrhizobium japonicum) USDA110(T)., Applied and Environmental Microbiology, 85, Article No. e01552-19.
- Dello Jacovo, E.; Valentine, T.A.; Maluk, M.; Toorop, P.; Lopez del Egido, L.; Frachon, N.; Kenicer, G.; Park, L.; Goff, M.; Ferro, V.A.; Bonomi, C.; James, E.K.; Iannetta, P.P.M. (2019) Towards a characterisation of the wild legume bitter vetch (Lathyrus linifolius L. (Reichard) Bassler): heteromorphic seed germination, root nodule structure and N-fixing rhizobial symbionts., Plant Biology, 2, 523-532.
- De Meyer, S.E.; Andrews, M.; James, E.K.; Willems, A. (2019) Mesorhizobium carmichaelinearum sp. nov., isolated from Carmichaelineae spp. root nodules., International Journal of Systematic and Evolutionary Microbiology, 69, 146-152.
- Rubio, M.C.; Calvo-Begueria, L.; Diaz-Mendoza, M.; Elhiti, M.; Moore, M.; Matamoros, M.A.; James, E.K.; Diaz, I.; Perez-Rontome, C.; Villar, I.; Sein-Echaluce, V.C.; Hebelstrup, K.H.; Dietz, KJ.; Becana, M. (2019) Phytoglobins in the nuclei, cytoplasm and chloroplasts modulate nitric oxide signaling and interact with abscisic acid., The Plant Journal, 100, 38-54.
- Andrews, M.; Id, S.D.M.; James, E.K.; Stepkowski, T.; Hodge, S.; Simon, M.F.; Young, J.P.W. (2018) Horizontal transfer of symbiosis genes within and between rhizobial genera: occurrence and importance., Genes, 9, Article No. 321.
- Liu, H.J.; Sandal, N.; Andersen, K.R.; James, E.K.; Stougaard, J.; Kelly, S.; Kawaharada, Y. (2018) A genetic screen for plant mutants with altered nodulation phenotypes in response to rhizobial glycan mutants., New Phytologist, 220, 526-538.
- Rathi, S.; Tak, N.; Bissa, G.; Chouhan, B.; Ojha, A.; Adhikari, D.; Barik, S.K.; Satyawada, R.R.; Sprent, J.I.; James, E.K.; Gehlot, H.S. (2018) Selection of Bradyrhizobium or Ensifer symbionts by the native Indian caesalpinioid legume Chamaecrista pumila depends on soil pH and other edaphic and climatic factors., FEMS Microbiology Ecology, 94, Article No. fiy180.
- Estrada-de los Santos, P.; Palmer, M.; Chavez-Ramirez, B.; Beukes, C.; Steenkamp, E.T.; Briscoe, L.; Khan, N.; Maluk, M.; Lafos, M.; Humm, E.; Arrabit, M.; Crook, M.; Gross, E.; Simon, M.F.; dos Reis, F.B.; Whitman, W.B.; Shapiro, N.; Poole, P.S.; Hirsch, A.M.; Venter, S.N.; James, E.K. (2018) Whole genome analyses suggests that Burkholderia sensu lato contains two additional novel genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the evolution of diazotrophy and nodulation in the Burkholderiaceae., Genes, 9, Article No. 389.
- Silva, V.C.; Alves, P.A.C.; Rhem, M.F.K.; dos Santos, J.M.F.; James, E.K.; Gross, E. (2018) Brazilian species of Calliandra Benth. (tribe Ingeae) are nodulated by diverse strains of Paraburkholderia., Systematic and Applied Microbiology, 41, 241-250.
- Bournaud, C.; James, E.K.; de Faria, S.M.; Lebrun, M.; Melkonian, R.; Duponnois, R.; Tisseyre, P.; Moulin, L.; Prin, Y. (2018) Interdependency of efficient nodulation and arbuscular mycorrhization in Piptadenia gonoacantha, a Brazilian legume tree., Plant Cell and Environment, 41, 2008-2020.
- Pires, R.D.; dos Reis, F.B.; Zilli, J.E.; Fischer, D.; Hofmann, A.; James, E.K.; Simon, M.F. (2018) Soil characteristics determine the rhizobia in association with different species of Mimosa in central Brazil., Plant and Soil, 423, 411-428.
- Malolepszy, A.; Kelly, S.; Sorensen, K.K.; James, E.K.; Kalisch, C.; Bozsoki, Z.; Panting, M.; Andersen, S.U.; Sato, S.; Tao, K.; Jensen, D.B.; Vinther, M.; de Jong, N.; Madsen, L.H.; Umehara, Y.; Gysel, K.; Berentsen, M.U.; Blaise, M.; Jensen, K.J.; Thygesen, M.B.; Sandal, N.; Andersen, K.R.; Radutoiu, S. (2018) A plant chitinase controls cortical infection thread progression and nitrogen-fixing symbiosis., eLife, 7, Article No. e38874.
- Fuechtbauer, W.; Yunusov, T.; Bozsoki, Z.; Gavrin, A.; James, E.K.; Stougaard, J.; Schornack, S.; Radutoiu, S. (2018) LYS12 LysM receptor decelerates Phytophthora palmivora disease progression in Lotus japonicus., Plant Journal, 93, 297-310.
- Ojha, A.; Tak, N.; Rathi, S.; Chouhan, B.; Rao, S.R.; Barik, S.K.; Joshi, S.R.; Sprent, J.S.; James, E.K.; Gehlot, H.S. (2017) Molecular characterization of novel Bradyrhizobium strains nodulating ErioSema Chinese and Flemingia vestita, important unexplored native legumes of the sub-Himalayan region (Meghalaya) of India., Systematic and Applied Microbiology, 40, 334-344.
- dos Santos, J.M.F.; Alves, P.A.C.; Silva, V.C.; Rhem, M.F.K.; James, E.K.; Gross, E. (2017) Diverse genotypes of Bradyrhizobium nodulate herbaceous Chamaecrista (Moench) Fabaceae, Caesalpinioideae) species in Brazil., Systematic and Applied Microbiology, 40, 69-79.
- Tian, R.; Heiden, S.; Osman, W.A.M.; Ardley, J.A.; James, E.K.; Gollagher, M.M.; Tiwari, R.; Seshadri, R.; Kyrpides, N.C.; Reeve, W.G. (2017) Evolution of a multi-step phosphorelay signal transduction system in Ensifer: recruitment of the sigma factor RpoN and a novel enhances binding protein triggers acid-activated gene expression., Molecular Microbiology, 103, 829-844.
- Faoro, H.; Menegazzo, R.R.; Battistoni, F.; Gyaneshwar, P.; do Amaral, F.P.; Taule, C.; Rausch, S.; Galv?o, P.G.; de los Santos, C.; Mitra, S.; Heijo, G.; Sheu, S-Y.; Chen, W.M.; Mareque, C.; Tadra-Sfeir, M.Z.; Baldani, J.I.; Maluk, M.; Guimar?es, A.P.; Stacey, G.; de Souza, E.M.; Pedrosa, F.O.; Cruz, L.M.; James, E.K. (2017) The oil-contaminated soil diazotroph Azoarcus olearius DQS-4T if genetically and phenotypically similar to the model grass endophyte Azoarcus sp. BH72., Environmental Microbiology Reports, 9, 223-238.
- Sprent, J.I.; Ardley, J.; James, E.K. (2017) Biogeography of nodulated legumes and their nitrogen fixing symbionts - Tansley review., New Phytologist, 215, 40-56.
- Kawaharada, Y.; James, E.K.; Kelly, S.; Sandal, N.; Stougaard, J. (2017) The ethylene responsive factor required for nodulation 1 (ERN1) transcription factor is required for infection-thread formation in Lotus japonicus., Molecular Plant-Microbe Interactions, 30, 194-204.
- Kawaharada, Y.; Nielson, M.W.; Kelly, S.; James, E.K.; Andersen, K.R.; Rasmussen, S.R.; Fuchtbauer, W.; Madsen, L.H.; Heckmann, A.B.; Radutoiu, S.; Stougaard, J. (2017) Differential regulation of the Epr3 receptor coordinates membrane - restricted rhizobial colonization of root nodule primordia., Nature Communications, 8, Article No. 14534.
- Sankhla, I.S.; Tak, N.; Meghwal, R.R.; Choudhary, S.; Tak, A.; Rathi, S.; Sprent, J.I.; James, E.K.; Gehlot, H.S. (2017) Molecular characterization of nitrogen fixing microsymbionts from root nodules of Vachellia (Acacia) jacquemontii, a native legume from the Thar Desert of India., Plant and Soil, 410, 21-40.
- Iannetta, P.P.M.; Begg, G.; Black, K.; Hawes, C.; Karley, A.j.; James, E.K.; Maluk, M.; Newton, A.; Squire, G.R.; Walker, G.; White, P. (2017) Teaming up for good: intercropping and farming-science partnership at the James Hutton Institute., NGO Report for www.LEAF.org, 8 November 2017.
- Iannetta, P.P.M.; Begg, G.; Black, K.; Hawes, C.; Karley, A.J.; James, E.K.; Maluk, M.; Newton, A.C.; Squire, G.R.; Walker, G.; White, P.J. (2017) Sustainable legume systems for improved primary produce., SAB Annual Report, May 2017.
- Mitra, S.; Mukhjerjee, A.; Wiley-Kalil, A.; Das, S.; Owen, H.; Reddy, P.M.; James, E.K.; Ane, J.M.; Gyaneshwar, P. (2016) A rhamnose-deficient Lipopolysaccharide mutant of Rhizobium sp. IRBG74 is defective in root colonization and beneficial interactions with its flooding-tolerant hosts Sesbania cannabina and wetland rice., Journal of Experimental Botany, 67, 5869-5884.
- Barauna, A.C.; Rouws, L.F.M.; Simoes-Araujo, J.L.; dos Reis Junior, F.B.; Iannetta, P.P.M.; Maluk, M.; Goi S.R.; Reis, V.M.; James, E.K.; Zilli, J.E. (2016) Rhizobium altiplani sp. nov. isolated from effective nodules on Mimosa pudica growing in untypically alkaline soil in Central Brazil., International Journal of Systematic and Evolutionary Microbiology, 66, 1-7.
- Lemaire, B.; Chimphango, S.; Stirton, C.; Rafundeen S.; Honnay, O.; Smets, E.; Chen, W-M.; Sprent, J.I.; James, E.K.; Muasya, A.M. (2016) Biogeographical patterns of legume-nodulating Burkholderia spp.: from African Fynbos to continental scales., Applied and Environmental Microbiology, 82, 5099-5115.
- Platero, R.; James, E.K.; Rios, C.; Iriarte, A.; Sandes, L.; Zabaleta, M.; Battistoni, F.; Fabiano, E. (2016) Novel Cupriavidus strains isolated from root nodules of native Uruguayan Mimosa species., Applied and Environmental Microbiology, 82, 3150-3164.
- Gonzalez-Andres, F.; James, E. (2016) National meeting of the Spanish Society of Nitrogen Fixation (XV SEFIN)., Symbiosis, 67, 1-2.
- Lemaire, B.; Van Cauwenberghe, J.; Verstraete, B.; Chimphango, S.; Stirton, C.; Honnay, O.; Smets, E.; Sprent, J.I.; James, E.K.; Muasya, A.M. (2016) Characterization of the papilionoid-Burkholderia interaction in the Fynbos biome: the diversity and distribution of beta-rhizobia nodulating Podalyria calyptrata (Fabaceae, Podalyrieae)., Systematic and Applied Microbiology, 39, 41-48.
- Iannetta, P.P.M.; Young, M.; Bachinger, J.; Bergkvist, G.; Lopez-Bellido, R.J.; Monti, M.; Pappa, V.A.; Reckling, M.; Topp, C.F.E.; Walker, R.L.; Rees, R.M.; Watson, C.A.; James, E.K.; Squire, G.R.; Begg, G.S. (2016) A comparative nitrogen balance and productivity analysis of legume and non-legume supported cropping systems: the potential role of biological nitrogen fixation., Frontiers in Plant Science, 7, Article No. 1700.
- Young, J.P.W.; Moeskj?r, S.; Afonin, A.; Rahi, P.; Maluk, M.; James, E.K.; Cavassim, M.I.A.; Rashid, M.; Aserse, A.A.; Perry, B.J.; Wang, E.T.; Velazquez, E.; Andronov, E.E.; Tampakaki, A.; Flores Felix, J.D.; Rivas Gonzalez, R.; Youseif, S.H.; Lepetit, M.; Boivin, S.; Jorrin, B.; Kenicer, G.J.; Peix, A.; Hynes, M.F.; Ramirez-Bahena, M.H.; Gulati, A.; Tian, C-F. (2021) Defining the rhizobium leguminosarum species complex., Genes, 12, Article No. 111.
- Raittz, R.T.; Reginatto De Pierri, C.; Maluk, M.; Bueno Batista, M.; Carmona, M.; Junghare, M.; Faoro, H.; Cruz, L.M.; Battistoni, F.; de Souza, E.; de Oliverira Pedrosa, F.; Chen, W.-M.; Poole, P.S.; Dixon, R.A.; James, E.K. (2021) Comparative genomics provides insights into the taxonomy of Azoarcus and reveals separate origins of Nif genes in the proposed Azoarcus and Aromatoleum genera., Genes, 12, Article No. 71.
- Mavima, L.; Beukes, C.W.; Palmer, M.; De Meyer, S.E.; James, E.K.; Maluk, M.; Gross, E.; Bueno dos Reis Junior, F.; Avontuur, J.R.; Chan, W.Y.; Venter, S.N.; Steenkamp, E.T. (2021) Paraburkholderia youngii sp. nov. and 'Paraburkholderia atlantica' - Brazilian and Mexican Mimosa-associated rhizobia that were previously known as Paraburkholderia tuberum sv. Mimosae., Systematic and Applied Microbiology, 44, Article No. 126152.
- Unkovich, M.; Herridge, D.; James, E.K.; Giller, K.; Peoples, M.B. (2020) Reliable quantification of N-2 fixation by non-legumes remains problematic., Nutrient Cycling in Agroecosystems, 118, 223-225.
- Reis, V.M.; Alves, B.J.R.; Hartmann, A.; James, E.K.; Zilli, J.E. (2020) Beneficial microorganisms in agriculture: the future of plant growth-promoting rhizobacteria., Plant and Soil, 451, 1-3.
- Choudhary, S.; Tak, N.; Bissa, G.; Chouhan, B.; Choudhary, P.; Sprent, J.I.; James, E.K.; Gehlot, H.S. (2020) The widely distributed legume tree Vachellia (Acacia) nilotica subsp. indica is nodulated by genetically diverse Ensifer strains in India., Symbiosis, 80, 15-31.
- Estrada-de los Santos, P.; Palmer, M.; Steenkamp, E.T.; Maluk, M.; Beukes, C.; Hirsch, A.M.; James, E.K.; Venter, S.N. (2019) Trinickia dabaoshanensis sp. nov., a new name for a lost species., Archives of Microbiology, 201, 1313-1316.
- Temesgen, D.; Maluk, M.; James, E.K.; Iannetta, P.P.M.; Assefa, F. (2019) The functional characterisation of soybean (Glycine max L.) rhizospheric bacteria indigenous to Ethiopian soils., African Journal of Agricultural Research, 14, 1659-1673.
- Pastor-Bueis, R.; Sanchez-Canizares, C.; James, E.K.; Gonzalez-Andres, F. (2019) Formulation of a highly effective inoculant for common bean based on an autochthonous elite strain of rhizobium leguminosarum bv. phaseoli, and genomic-based insights into its agronomic performance., Frontiers in Microbiology, 10, Article No. 2724.
- Speck, J.J.; James, E.K.; Sugawara, M.; Sadowsky, M.J.; Gyaneshwar, P. (2019) An alkane sulfonate monooxygenase is required for symbiotic nitrogen fixation by Bradyrhizobium diazefficiens (syn. Bradyrhizobium japonicum) USDA110(T)., Applied and Environmental Microbiology, 85, Article No. e01552-19.
- Dello Jacovo, E.; Valentine, T.A.; Maluk, M.; Toorop, P.; Lopez del Egido, L.; Frachon, N.; Kenicer, G.; Park, L.; Goff, M.; Ferro, V.A.; Bonomi, C.; James, E.K.; Iannetta, P.P.M. (2019) Towards a characterisation of the wild legume bitter vetch (Lathyrus linifolius L. (Reichard) Bassler): heteromorphic seed germination, root nodule structure and N-fixing rhizobial symbionts., Plant Biology, 2, 523-532.
- De Meyer, S.E.; Andrews, M.; James, E.K.; Willems, A. (2019) Mesorhizobium carmichaelinearum sp. nov., isolated from Carmichaelineae spp. root nodules., International Journal of Systematic and Evolutionary Microbiology, 69, 146-152.
- Rubio, M.C.; Calvo-Begueria, L.; Diaz-Mendoza, M.; Elhiti, M.; Moore, M.; Matamoros, M.A.; James, E.K.; Diaz, I.; Perez-Rontome, C.; Villar, I.; Sein-Echaluce, V.C.; Hebelstrup, K.H.; Dietz, KJ.; Becana, M. (2019) Phytoglobins in the nuclei, cytoplasm and chloroplasts modulate nitric oxide signaling and interact with abscisic acid., The Plant Journal, 100, 38-54.
- Andrews, M.; Id, S.D.M.; James, E.K.; Stepkowski, T.; Hodge, S.; Simon, M.F.; Young, J.P.W. (2018) Horizontal transfer of symbiosis genes within and between rhizobial genera: occurrence and importance., Genes, 9, Article No. 321.
- Liu, H.J.; Sandal, N.; Andersen, K.R.; James, E.K.; Stougaard, J.; Kelly, S.; Kawaharada, Y. (2018) A genetic screen for plant mutants with altered nodulation phenotypes in response to rhizobial glycan mutants., New Phytologist, 220, 526-538.
- Rathi, S.; Tak, N.; Bissa, G.; Chouhan, B.; Ojha, A.; Adhikari, D.; Barik, S.K.; Satyawada, R.R.; Sprent, J.I.; James, E.K.; Gehlot, H.S. (2018) Selection of Bradyrhizobium or Ensifer symbionts by the native Indian caesalpinioid legume Chamaecrista pumila depends on soil pH and other edaphic and climatic factors., FEMS Microbiology Ecology, 94, Article No. fiy180.
- Estrada-de los Santos, P.; Palmer, M.; Chavez-Ramirez, B.; Beukes, C.; Steenkamp, E.T.; Briscoe, L.; Khan, N.; Maluk, M.; Lafos, M.; Humm, E.; Arrabit, M.; Crook, M.; Gross, E.; Simon, M.F.; dos Reis, F.B.; Whitman, W.B.; Shapiro, N.; Poole, P.S.; Hirsch, A.M.; Venter, S.N.; James, E.K. (2018) Whole genome analyses suggests that Burkholderia sensu lato contains two additional novel genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the evolution of diazotrophy and nodulation in the Burkholderiaceae., Genes, 9, Article No. 389.
- Silva, V.C.; Alves, P.A.C.; Rhem, M.F.K.; dos Santos, J.M.F.; James, E.K.; Gross, E. (2018) Brazilian species of Calliandra Benth. (tribe Ingeae) are nodulated by diverse strains of Paraburkholderia., Systematic and Applied Microbiology, 41, 241-250.
- Bournaud, C.; James, E.K.; de Faria, S.M.; Lebrun, M.; Melkonian, R.; Duponnois, R.; Tisseyre, P.; Moulin, L.; Prin, Y. (2018) Interdependency of efficient nodulation and arbuscular mycorrhization in Piptadenia gonoacantha, a Brazilian legume tree., Plant Cell and Environment, 41, 2008-2020.
- Pires, R.D.; dos Reis, F.B.; Zilli, J.E.; Fischer, D.; Hofmann, A.; James, E.K.; Simon, M.F. (2018) Soil characteristics determine the rhizobia in association with different species of Mimosa in central Brazil., Plant and Soil, 423, 411-428.
- Malolepszy, A.; Kelly, S.; Sorensen, K.K.; James, E.K.; Kalisch, C.; Bozsoki, Z.; Panting, M.; Andersen, S.U.; Sato, S.; Tao, K.; Jensen, D.B.; Vinther, M.; de Jong, N.; Madsen, L.H.; Umehara, Y.; Gysel, K.; Berentsen, M.U.; Blaise, M.; Jensen, K.J.; Thygesen, M.B.; Sandal, N.; Andersen, K.R.; Radutoiu, S. (2018) A plant chitinase controls cortical infection thread progression and nitrogen-fixing symbiosis., eLife, 7, Article No. e38874.
- Fuechtbauer, W.; Yunusov, T.; Bozsoki, Z.; Gavrin, A.; James, E.K.; Stougaard, J.; Schornack, S.; Radutoiu, S. (2018) LYS12 LysM receptor decelerates Phytophthora palmivora disease progression in Lotus japonicus., Plant Journal, 93, 297-310.
- Ojha, A.; Tak, N.; Rathi, S.; Chouhan, B.; Rao, S.R.; Barik, S.K.; Joshi, S.R.; Sprent, J.S.; James, E.K.; Gehlot, H.S. (2017) Molecular characterization of novel Bradyrhizobium strains nodulating ErioSema Chinese and Flemingia vestita, important unexplored native legumes of the sub-Himalayan region (Meghalaya) of India., Systematic and Applied Microbiology, 40, 334-344.
- dos Santos, J.M.F.; Alves, P.A.C.; Silva, V.C.; Rhem, M.F.K.; James, E.K.; Gross, E. (2017) Diverse genotypes of Bradyrhizobium nodulate herbaceous Chamaecrista (Moench) Fabaceae, Caesalpinioideae) species in Brazil., Systematic and Applied Microbiology, 40, 69-79.
- Tian, R.; Heiden, S.; Osman, W.A.M.; Ardley, J.A.; James, E.K.; Gollagher, M.M.; Tiwari, R.; Seshadri, R.; Kyrpides, N.C.; Reeve, W.G. (2017) Evolution of a multi-step phosphorelay signal transduction system in Ensifer: recruitment of the sigma factor RpoN and a novel enhances binding protein triggers acid-activated gene expression., Molecular Microbiology, 103, 829-844.
- Faoro, H.; Menegazzo, R.R.; Battistoni, F.; Gyaneshwar, P.; do Amaral, F.P.; Taule, C.; Rausch, S.; Galv?o, P.G.; de los Santos, C.; Mitra, S.; Heijo, G.; Sheu, S-Y.; Chen, W.M.; Mareque, C.; Tadra-Sfeir, M.Z.; Baldani, J.I.; Maluk, M.; Guimar?es, A.P.; Stacey, G.; de Souza, E.M.; Pedrosa, F.O.; Cruz, L.M.; James, E.K. (2017) The oil-contaminated soil diazotroph Azoarcus olearius DQS-4T if genetically and phenotypically similar to the model grass endophyte Azoarcus sp. BH72., Environmental Microbiology Reports, 9, 223-238.
- Sprent, J.I.; Ardley, J.; James, E.K. (2017) Biogeography of nodulated legumes and their nitrogen fixing symbionts - Tansley review., New Phytologist, 215, 40-56.
- Kawaharada, Y.; James, E.K.; Kelly, S.; Sandal, N.; Stougaard, J. (2017) The ethylene responsive factor required for nodulation 1 (ERN1) transcription factor is required for infection-thread formation in Lotus japonicus., Molecular Plant-Microbe Interactions, 30, 194-204.
- Kawaharada, Y.; Nielson, M.W.; Kelly, S.; James, E.K.; Andersen, K.R.; Rasmussen, S.R.; Fuchtbauer, W.; Madsen, L.H.; Heckmann, A.B.; Radutoiu, S.; Stougaard, J. (2017) Differential regulation of the Epr3 receptor coordinates membrane - restricted rhizobial colonization of root nodule primordia., Nature Communications, 8, Article No. 14534.
- Sankhla, I.S.; Tak, N.; Meghwal, R.R.; Choudhary, S.; Tak, A.; Rathi, S.; Sprent, J.I.; James, E.K.; Gehlot, H.S. (2017) Molecular characterization of nitrogen fixing microsymbionts from root nodules of Vachellia (Acacia) jacquemontii, a native legume from the Thar Desert of India., Plant and Soil, 410, 21-40.
- Mitra, S.; Mukhjerjee, A.; Wiley-Kalil, A.; Das, S.; Owen, H.; Reddy, P.M.; James, E.K.; Ane, J.M.; Gyaneshwar, P. (2016) A rhamnose-deficient Lipopolysaccharide mutant of Rhizobium sp. IRBG74 is defective in root colonization and beneficial interactions with its flooding-tolerant hosts Sesbania cannabina and wetland rice., Journal of Experimental Botany, 67, 5869-5884.
- Tak, N.; Awasthi, E.; Bissa, G.; Meghwal, R.R.; James, E.K.; Sprent, J.S.; Gehlot, H.S. (2016) Multi locus sequence analysis and symbiotic characterization of novel Ensifer strains nodulating Tephrosia spp. In the Indian Thar Desert., Systematic and Applied Microbiology, 39, 534-545.
- Barauna, A.C.; Rouws, L.F.M.; Simoes-Araujo, J.L.; dos Reis Junior, F.B.; Iannetta, P.P.M.; Maluk, M.; Goi S.R.; Reis, V.M.; James, E.K.; Zilli, J.E. (2016) Rhizobium altiplani sp. nov. isolated from effective nodules on Mimosa pudica growing in untypically alkaline soil in Central Brazil., International Journal of Systematic and Evolutionary Microbiology, 66, 1-7.
- Lemaire, B.; Chimphango, S.; Stirton, C.; Rafundeen S.; Honnay, O.; Smets, E.; Chen, W-M.; Sprent, J.I.; James, E.K.; Muasya, A.M. (2016) Biogeographical patterns of legume-nodulating Burkholderia spp.: from African Fynbos to continental scales., Applied and Environmental Microbiology, 82, 5099-5115.
- Platero, R.; James, E.K.; Rios, C.; Iriarte, A.; Sandes, L.; Zabaleta, M.; Battistoni, F.; Fabiano, E. (2016) Novel Cupriavidus strains isolated from root nodules of native Uruguayan Mimosa species., Applied and Environmental Microbiology, 82, 3150-3164.
- Gonzalez-Andres, F.; James, E. (2016) National meeting of the Spanish Society of Nitrogen Fixation (XV SEFIN)., Symbiosis, 67, 1-2.
- Lemaire, B.; Van Cauwenberghe, J.; Verstraete, B.; Chimphango, S.; Stirton, C.; Honnay, O.; Smets, E.; Sprent, J.I.; James, E.K.; Muasya, A.M. (2016) Characterization of the papilionoid-Burkholderia interaction in the Fynbos biome: the diversity and distribution of beta-rhizobia nodulating Podalyria calyptrata (Fabaceae, Podalyrieae)., Systematic and Applied Microbiology, 39, 41-48.
- Iannetta, P.P.M.; Young, M.; Bachinger, J.; Bergkvist, G.; Lopez-Bellido, R.J.; Monti, M.; Pappa, V.A.; Reckling, M.; Topp, C.F.E.; Walker, R.L.; Rees, R.M.; Watson, C.A.; James, E.K.; Squire, G.R.; Begg, G.S. (2016) A comparative nitrogen balance and productivity analysis of legume and non-legume supported cropping systems: the potential role of biological nitrogen fixation., Frontiers in Plant Science, 7, Article No. 1700.
- Bontemps, C.; Rogel, M.A.; Wiechmann, A.; Mussabekova, A.; Moody, S.; Simon, M.F.; Moulin, L.; Elliott, G.N.; Lacercat-Didier, L.; Dasilva, C.; Grether, R.; Camargo-Ricalde, S.L.; Chen, W.; Sprent, J.I.; Martinez-Romero, E.; Young, J.P.W.; James, E.K. (2016) Endemic Mimosa species from Mexico prefer alphaproteobacterial rhizobial symbionts., New Phytologist, 209, 319-333.
- Sheu, S-Y.; Chen, M.H.; Liu, W.Y.Y.; Andrews, M.; James, E.K.; Ardley, J.K.; De Meyer, S.E.; James, T.K.; Howieson, J.G.; Coutinho, B.G.; Chen, W.M. (2015) Burkholderia dipogonis sp. Nov., isolated from root nodules of Dipogon lignosus in New Zealand and Western Australia., International Journal of Systematic and Evolutionary Microbiology, 65, 4716-4723.
- Vasconcelos, M.W.; Grusak, M.A.; Pinto, E.; Gomes, A.; Ferreira, H.; Balazs, B.; Centofanti, T.; Ntatsi, G.; Savvas, D.; Karkanis, A.; Williams, M.; Vandenberg, A.; Toma, L.; Shrestha, S.; Akaichi, F.; Barrios, C.O.; Gruber, S.; James, E.K.; Maluk, M.; Karkey, A.J.; Iannetta, P.P.M. (2020) The biology of legumes and their agronomic, economic, and social impact., In: Hasanuzzaman, M., Araujo, S. & Singh Gill, S. (eds.). The Plant Family Fabaceae: The Biology and Physiological Responses to Environmental Issues. Springer Nature, Singapre, Chapter 1, pp3-25.
- James, E.K. (2016) Nitrogen fixation., In: Thomas, B., Murray, B.G. & Murphy, D.J. (eds.). Encyclopedia of Applied Plant Sciences, 2nd Edition, Waltham, MA, Academic Press, Volume 1, pp271-277.
- Hartmann, A.; James, E.K.; de Bruijn, F.J.; Schwab, S.; Rothballer, M.; Schmid, M. (2015) In situ localization and strain-specific quantification of Azospirillum and other diazotrophic plant growth-promoting bacteria (PGPB) using antibodies and molecular probes., In: Cassan, F.D., Okon, J. & Cecilia Creus, C. (eds.). Handbook for Azospirillum. Technical Issues and Protocols. Springer, Dordrecht, Chapter 3, pp45-64.
- Moulin, L.; James, E.K.; Klonowska, A.; Miana de Faria, S.; Simon, M.F. (2015) Phylogeny, diversity, geographical distribution and host range of legume-nodulating Betaproteobacteria: what is the role of plant taxonomy?, In: de Bruijn, E. (ed.). Biological Nitrogen Fixation. Volume 1. Wiley-Blackwell, Chapter 17, pp177-190
- Iannetta, P.P.M.; Begg, G.; Black, K.; Hawes, C.; Karley, A.j.; James, E.K.; Maluk, M.; Newton, A.; Squire, G.R.; Walker, G.; White, P. (2017) Teaming up for good: intercropping and farming-science partnership at the James Hutton Institute., NGO Report for www.LEAF.org, 8 November 2017.
- Iannetta, P.P.M.; Begg, G.; Black, K.; Hawes, C.; Karley, A.J.; James, E.K.; Maluk, M.; Newton, A.C.; Squire, G.R.; Walker, G.; White, P.J. (2017) Sustainable legume systems for improved primary produce., SAB Annual Report, May 2017.
- Squire, G.R.; Begg, G.S.; Hawes, C.; Iannetta, P.P.M.; James, E.K.; Karley, A.J.; Young, M.W. (2011) Scotland's wild arable plants., Annual Report of the Scottish Crop Research Institute for 2010, pp21-23.
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