Robbie Waugh
Current positions
-
2011 - Research Leader (PC2), James Hutton Institute (80%)
- 2012 - Professor, Div. Plant Sciences, University of Dundee (20%)
- 2008 - Honorary Professor, University of Glasgow
- 2013 - Trustee Director of ‘The Genome Analysis Centre’, Norwich
- 2014 - Adjunct Professor, University of Adelaide
- 2016 – Adjunct Professor, University of Minneapolis (pending)
- 2014 – Co-Director, Scottish Food Security Alliance (Crops)
- 2010 – Board Member, ARC Centre of Excellence in Plant Cell Walls, Adelaide
Awards
Fellow of the Royal Society of Biology (2015 onwards)
Fellow of the Royal Society of Edinburgh (2013 onwards)
Honorary Professor, University of Glasgow (2008 onwards)
Education
- BSc (hons), Strathclyde University (1981)
- PhD, University of Dundee (1987)
Current research interests
In late 2015 I was awarded a 5-year ERC advanced grant to extend our work on meiosis and recombination in large genome crop plants. This complements ongoing interests in inflorescence development and architecture and the development and application of genetic (e.g. GWAS) and genomic technologies (e.g. exome sequencing) to explore, largely through collaboration, a range of issues in plant biology (e.g. cell wall biology). Common themes include the impact of natural (e.g. crop wild relatives and landraces) and induced (e.g. mutants, genome editing) diversity, how these can be assessed, generated, captured efficiently and exploited for both discovery science and crop improvement. In future, while maintaining a focus on gene identification we will also conduct more mechanistic studies in order to understand the individual genes and networks of interaction that condition certain biological responses (e.g. inflorescence architecture). Translating research into tangible outcomes remains an important driver and we have had considerable success over an extended period in identifying genes that control a broad range of phenotypic traits. We therefore actively collaborate with the commercial sector, who generally deploy technologies that we have developed, or discoveries we have made, in practical crop improvement programmes.
Bibliography
- Comadran, J.; Waugh, R. (In press) Introduccion al mapeo por asociacion genetica., La genetica de los caracteres cuantitativos en la mejora vegetal del siglo XXI (eds. J. Comadran, J. Moreno, A. Torres, J. Canizares, R. Giraldez, B. Ordas, I. Romagosa, R. Lozano.). Spanish Society of Genetics, Gijon, Chapter 9.
- Barakate, A.; Orr, J.; Schreiber, M.; Colas, I.; Lewandowska, D.; McCallum, N.; Macaulay, M.; Morris, J.; Arrieta, M.; Hedley, P.E.; Ramsay, L.; Waugh, R. (2021) Barley anther and meiocyte transcriptome dynamics in meiotic prophase I., Frontiers in Plant Science, 11, Article No. 619404.
- McCouch, S.; Navabi, K.; Abberton, M.; Anglin, N.L.; Barbieri, R.L.; Baum, M.; Bett, K.; Booker, H.; Brown, G.L.; Bryan, G.J.; Cattivelli, L.; Charest, D.; Eversole, K.; Freitas, M.; Ghamkhar, K.; Grattapaglia, D.; Henry, R.; Inglis, M.C.V.; Islam, T.; Kehel, Z.; Kersey, P.J.; King, G.J.; Kresovich, S.; Marden, E.; Mayes, S.; Ndjiondjop, M.N.; Nguyen, H.T.; Paiva, S.R.; Papa, R.; Phillips, P.W.B.; Rasheed, A.; Richards, C.; Rouard, M.; Sampaio, M.J.A.S.; Scholz, U.; Shaw, P.D.; Sherman, B.; Staton, S.E.; Stein, N.; Svensson, J.; Tester, M.; Valls, J.F.M.; Varshney, R.; Visscher, S.; von Wettberg, E.; Waugh, R. (2020) Mobilizing crop biodiversity., Molecular Plant, 13, 1341-1344.
- Arrieta, M; Willems, G; DePessemier, G; Colas, I; Burkholz, A; Darracq, A; Vanstraelen, S; Pacolet, P; Barre, C; Kempeneers, P; Waugh, R; Barnes, S; Ramsay, L (2020) The effect of heat stress on sugar beet recombination., Theoretical and Applied Genetics. Published online
- Looseley, M.E.; Ramsay, L.; Bull, H.; Swanston, J.S.; Shaw, P.D.; Macaulay, M.; Booth, A.; Russell, J.R.; Waugh, R.; Thomas, W.T.B. (2020) Association mapping of malting quality traits in UK spring and winter barley cultivar collections., Theoretical and Applied Genetics, 133, 2567-2582.
- Arrieta, M.; Colas, I.; Macaulay, M.; Waugh, R.; Ramsay, L. (2020) A modular tray growth system for barley., In: Pradillo M. & Heckmann S. (eds). Plant Meiosis. Methods in Molecular Biology, Humana, New York, Volume 2061, pp367-379.
- Darrier, B.; Arrieta, M.; Mittmann, S.U.; Sourdille, P.; Ramsay, L.; Waugh, R.; Colas, I. (2020) Following the formation of synaptonemal complex formation in wheat and barley by high-resolution microscopy., In: Pradillo M. & Heckmann S. (eds). Plant Meiosis. Methods in Molecular Biology, Humana, New York, Volume 2061, pp207-215.
- Garcia-Gimenez, G.; Russell, J.; Aubert, M.K.; Fincher, G.B.; Burton, R.A.; Waugh, R.; Tucker, M.R.; Houston, K. (2019) Barley grain (1,3;1,4)-beta-glucan content: effects of transcript and sequence variation in genes encoding the corresponding synthase and endohydrolase enzymes., Scientific Reports, 9, Article No. 17250.
- Schreiber, M.; Barakate, A.; Uzrek, N.; Macaulay, M.; Sourdille, A.; Morris, J.; Hedley, P.E.; Ramsay, L.; Waugh, R. (2019) A highly mutagenised barley (cv. Golden Promise) TILLING population coupled with strategies for screening-by-sequencing., Plant Methods, 15, Article No. 99.
- Patil, V.; McDermott, H.I.; McAllister, T.; Cummins, M.; Silva, J.C.; Mollison, E.; Meikle, R.; Morris, J.; Hedley, P.E.; Waugh, R.; Dockter, C.; Hansson, M.; McKim, S.M. (2019) APETALA2 control of barley internode elongation., Development, 146, Article No. dev170373.
- Pont, C.; Leroy, T.; Seidel, M.; Tondelli, A.; Duchemin, W.; Armisen, D.; Lang, D.; Bustos-Korts, D.; Goue, N.; Balfourier, F.; Molnar-Lang, M.; Lage, J.; Kilian, B.; Ozkan, H.; Waite, D.; Dyer, S.; Letellier, T.; Alaux, M.; Russell, J.; Keller, B.; van Eeuwijk, F.; Spannagl, M.; Mayer, K.F.X.; Waugh, R.; Stein, N.; Cattivelli, L.; Haberer, G.; Charmet, G.; Salse, J. (2019) Tracing the ancestry of modern bread wheats., Nature Genetics, 51, 905-911.
- Darrier, B.; Russel, J.; Milner, S.G.; Hedley, P.E.; Shaw, P.D.; Macaulay, M.; Ramsay, L.D.; Halpin, C.; Mascher, M.; Fleury, D.L.; Langridge, P.; Stein, N.; Waugh, R. (2019) A comparison of mainstream genotyping platforms for the evaluation and use of barley genetic resources., Frontiers in Plant Science, 10, Article No. 544.
- Langridge, P.; Waugh, R. (2019) Harnessing the potential of germplasm collections., Nature Genetics, 51, 200-201.
- Bustos-Korts, D.; Dawson, I.K.; Russell, J.; Tondelli, A.; Guerra, D.; Ferrandi, C.; Strozzi, F.; Nicolazzi, E.L.; Molnar-Land, M.; Ozkan, H.; Megyen, M.; Miko, P.; Cakur, E.; Yaksir, E.; Trabanco, N.; Delbono, S.; Kyriakidis, S.; Booth, A.; Cammarano, D.; Mascher, M.; Werner, P.; Cattivelli, L.; Rossini, L.; Stein, N.; Kilian, B.; Waugh, R.; van Eeuwijk, F.A. (2019) Exome sequences and multi-environment field trials elucidate the genetic basis of adaptation in barley., The Plant Journal, 99, 1172-1191.
- Coulter, M.; Buttner, B.; Hofmann, K.; Bayer, M.; Ramsay, L.; Schweizer, G.; Waugh, R.; Looseley, M.E.; Avrova, A. (2019) Characterisation of barley resistance to rhynchosporium on chromosome 6HS., Theoretical and Applied Genetics, 132, 1089-1107.
- Lewandowska, D.; Zhang, R.; Colas, I.; Uzrek, N.; Waugh, R. (2019) Application of a sensitive and reproducible label-free proteomic approach to explore the proteome of individual meiotic-phase barley anthers., Frontiers in Plant Science, 10, Article No. 393.
- Rapazote-Flores, P.; Bayer, M.; Milne, L.; Mayer, C-D.; Fuller, J.; Guo, W.; Hedley, P.E.; Morris, J.; Halpin, C.; Kam, J.; McKim, S.M.; Zwirek, M.; Casao, C.; Barakate, A.; Schreiber, M.; Stephen, G.; Zhang, R.; Brown, J.W.S.; Waugh, R.; Simpson, C.G. (2019) BaRTv1.0: a barley reference transcript dataset for quantitative measurement barley transcriptomes using RNA-seq., BMC Genomics, 20, Article No. 968.
- Zwirek, M.; Waugh, R.W.; McKim, S.M. (2019) Interaction between row-type genes in barley controls meristem determinacy and reveals novel routes to improved grain., New Phytologist, 221, 1950-1965.
- Daly, P.; McClellan, C.; Maluk, M.; Oakey, H.; Lapierre, C.; Waugh, R.; Stephens, J.; Marshall, D.; Barakate, A.; Tsuji, Y.; Goeminne, G.; Vanholme, R.; Boerjan, W.; Ralph, J.; Halpin, C. (2019) RNAi-suppression of barley caffeic acid O-methyltransferase modifies lignin despite redundancy in the gene family., Plant Biotechnology Journal, 17, 594-607.
- Colas, I.; Barakate, A.; Macaulay, M.; Schreiber, M.; Stephens, J.; Vivera, S.; Halpin, C.; Waugh, R.; Ramsay, L. (2019) Desynaptic5 carries a spontaneous semi-dominant mutation affecting Disrupted Meiotic cDNA 1 (DMC1) in barley., Journal of Experimental Botany, 70, 2683-2698.
- Mittmann, S.; Arrieta, M.; Ramsay, L.; Waugh, R.; Colas, I. (2019) Preparation of barley pollen mother cells for confocal and super resolution microscopy., In: Harwood, W.A. (ed.). Barley: Methods and Protocols. Methods Molecular Biology, Volume 1900, Humana Press, New York, Chapter 11, pp167-179.
- Bayer, M.; Morris, J.; Booth, C.; Booth, A.; Uzrek, N.; Russell, J.R.; Waugh, R.; Hedley, P.E. (2019) Exome capture for variant discovery and analysis in barley., In: Harwood, W.A. (ed.). Barley: Methods and Protocols. Methods in Molecular Biology, Humana Press, New York, Volume 1900, Chapter 18, pp283-310.
- Mittmann, S.U.; Arrieta, M.; Ramsay, L.; Waugh, R.; Colas, I. (2019) Preparation of barley pollen mother cells for confocal and super resolution microscopy., In: Harwood, W.A. (ed.). Barley: Methods and Protocols. Methods in Molecular Biology, Humana Press, New York, Volume 1900, Chapter 11, pp167-179.
- Simpson, C.G.; Fuller, J.; Flores, J.; Mayer, C-D.; Calixto, C.P.G.; Milne, L.; Hedley, P.E.; Booth, C.; Waugh, R.; Brown, J.W.S. (2019) High resolution RT-PCR analysis of alternative barley transcripts., In: Harwood, W.A. (ed.). Barley: Methods and Protocols. Methods in Molecular Biology, Humana Press, New York, Volume 1900, Chapter 17, pp269-281.
- De la Fuente Canto, C.; Russell, J.; Hackett, C.A.; Booth, A.; Dancey, S.; George, T.S.; Waugh, R. (2018) Genetic dissection of quantitative and qualitative traits using a minimum set of barley recombinant chromosome substitution lines., BMC Plant Biology, 18, Article No. 340.
- De La Fuente Canto, C.; Kalogiros, D.I.; Ptashnyk, M.; George, T.S.; Waugh, R.; Bengough, A.G.; Russell, J.; Dupuy, L.X. (2018) Morphological and genetic characterisation of the root system architecture of selected barley recombinant chromosome substitution lines using an integrated phenotyping approach., Journal of Theoretical Biology, 447, 84-97.
- Prade, V.M.; Gundlach, H.; Twardziok, S.; Chapman, B.; Tan, C.; Langridge, P.; Schulman, A.H.; Stein, N.; Waugh, R.; Zhang, G.; Platzer, M.; Li, C.; Spannagl, M.; Mayer, K.F.X. (2018) The pseudogenes of barley., The Plant Journal, 93, 502-514.
- Looseley, M.E.; Griffe, L.L.; Buttner, B.; Wright, K.M.; Middlefell-Williams, J.; Bull, H.; Shaw, P.D.; Macaulay, M.; Booth, A.; Schweizer, G.; Russell, J.R.; Waugh, R.; Thomas, W.T.B.; Avrova, A. (2018) Resistance to Rhynchosporium commune in a collection of European spring barley germplasm., Theoretical and Applied Genetics, 131, 2513-2528.
- Okagaki, R.J.; Haaning, A.; Bilgic, H.; Heinen, S.; Druka, A.; Bayer, M.; Waugh, R.; Muehlbauer, G.J. (2018) ELIGULUM-A regulates lateral branch and leaf development in barley., Plant Physiology, 176, 2750-2760.
- Simpson, C.G.; Barrero, R.A.; Bayer, M.; Flavell, A.; Rapazote-Flores, P.; Bellgard, M.I.; Hedley, P.E.; Zhang, R.; Waugh, R. (2018) The expressed portion of the barley genome., In: Stein, N. & Muehlbauer, G. (eds.). The Barley Genome, Compendium of Plant Genomes. Springer, Cham, Switzerland, Chapter 7, 789-107.
- Twardziok, S.; Gundlach, H.; Hedley, P.E.; Bayer, M.; Platzer, M.; Groth, M.; Waugh, R.; Spannagl, M. (2018) Gene prediction in the barley genome., In: Stein, N. & Muehlbauer, G. (eds.). The Barley Genome, Compendium of Plant Genomes. Springer, Cham, Switzerland, Chapter 6, 73-88.
- Mascher, M.; Gundlach, H.; Himmelbach, A.; Beier, S.; Twardziok, S.O.; Wicker, T.; Radchuk, V.; Dockter, C.; Hedley, P.E.; Russell, J.; Bayer, M.; Ramsay, L.; Liu, H.; Haberer, G.; Zhang, X.; Zhang, Q.; Barrero, R.A.; Li, L.; Taudien, S.; Groth, M.; Felder, M.; Hastie, A.; Simkova, H.; Stankova, H.; Vrana, J.; Chan, S.; Munoz-Amatriain, M.; Ounit, R.; Wanamaker, S.; Bolser, D.; Colmsee, C.; Schmutzer, T.; Aliyeva-Schnorr, L.; Grasso, S.; Tanskanen, J.; Chailyan, A.; Sampath, D.; Heavens, D.; Clissold, L.; Cao, S.; Chapman, B.; Dai, F.; Han, Y.; Li, H.; Li, X.; Lin, C.; McCooke, J.K.; Tan, C.; Wang, P.; Wang, S.; Yin, S.; Zhou, G.; Poland, J.A.; Bellgard, M.I.; Borisjuk, L.; Houben, A.; Dolezel, J.; Ayling, S.; Lonardi, S.; Kersey, P.; Langridge, P.; Muehlbauer, G.J.; Clark, M.D.; Caccamo, M.; Schulman, U.; Mayer, K.F.X.; Platzer, M.; Close, T.J.; Scholz, U.; Hansson, M.; Zhang, G.; Braumann, I.; Spannagl, M.; Li, C.; Waugh. R.; Stein, N. (2017) A chromosome conformation capture ordered sequence of the barley genome , Nature, 544, 427-433.
- Bayer, M.; Ganal, M.; Hedley, P.E.; Macaulay, M.; Plieske, J.; Ramsay, L.; Rapazote-Flores, P.; Russell, J.; Shaw, P.; Thomas, W.; Waugh, R. (2017) Development and evaluation of a barley 50k iSelect SNP array., Frontiers in Plant Science, 8, Article No. 1792.
- Hassan, A.S.; Houston, K.; Lahnstein, J.; Shirley, N.; Schwerdt, J.G.; Gidley, M.J.; Waugh, R.; Little, A.; Burton, R.A. (2017) A genome wide association study of arabinoxylan content in 2-row spring barley grain., PLoS ONE, 12, Article No. e0182537.
- Hughes, J.; Hepworth, C.; Dutton, C.; Dunn, J.A.; Hunt, L.; Stephens, J.; Waugh, R.; Cameron, D.D.; Gray, J.E. (2017) Reducing stomatal density in barley improves drought tolerance without impacting on yield., Plant Physiology, 174, 776-787.
- Guo, W.; Calixto, C.P.G.; Tzioutziou, N.; Lin, P.; Waugh, R.; Brown, J.W.S.; Zhang, R. (2017) Evaluation and improvement of the regulatory inference for large co-expression networks with limited sample size., BMC Systems Biology, 11, Article No. 62.
- Beier, S.; Himmelbach, A.; Colmsee, C.; Zhang, X.Q.; Barrero, R.A.; Zhang, Q.S.; Li, L.; Bayer, M.; Bolser, D.; Taudien, S.; Groth, M.; Felder, M.; Hastie, A.; Simkova, H.; Stankova, H.; Vrana, J.; Chan, S.K.; Munoz-Amatriain, M.; Ounit, R.; Wanamaker, S.; Schmutzer, T.; Aliyeva-Schnorr, L.; Grasso, S.; Tanskanen, J.; Sampath, D.; Heavens, D.; Cao, SJ; Chapman, B; Dai, F; Han, Y; Li, H; Li, X; Lin, CY; McCooke, JK; Tan, C; Wang, SB; Yin, SY; Zhou, GF; Poland, JA; Bellgard, MI; Houben, A; Dolezel, J; Ayling, S; Lonardi, S.; Langridge, P.; Muehlbauer, G.J.; Kersey, P.; Clark, M.D.; Caccamo, M.; Schulman, A.H.; Platzer, M.; Close, T.J.; Hansson, M.; Zhang, G.P.; Braumann, I.; Li, C.D.; Waugh, R.; Scholz, U.; Stein, N.; Mascher, M. (2017) Construction of a map-based reference genome sequence for barley, Hordeum vulgare L., Scientific Data, 4, Article No. 170044.
- Colas, I.; Darrier, B.; Arrieta, M.; Mittmann, S.U.; Ramsay, L.; Sourdille, P.; Waugh, R. (2017) Observation of extensive chromosome axis remodeling during the "diffuse-phase" of meiosis in large genome cereals., Frontiers in Plant Science, 8, Article No. 1235.
- Gou, W.; Calixtio, C.P.G.; Tzioutziou, N.; Ping, L.; Waugh, R.; Brown, J.W.S.; Zhang, R. (2017) Evaluation and improvement of the regulatory inference for large co-expression networks with limited sample size., BMC Systems Biology, 11, Article No. 62.
- Bull, H.; Casao, M.C.; Zwirek, M.; Flavell, A.J.; Thomas, W.T.B.; Guo, W.B.; Zhang, R.X.; Rapazote-Flores, P.; Kyriakidis, S.; Russell, J.; Druka, A.; McKim, S.M.; Waugh, R. (2017) Barley SIX-ROWED SPIKE3 encodes a putative Jumonji C-type H3K9me2/me3 demethylase that represses lateral spikelet fertility., Nature Communications, 8, Article No. 936.
- Barakate, A.; Orr, J.; Schreiber, M.; Colas, I.; Lewandowska, D.; McCallum, N.; Macaulay, M.; Morris, J.; Arrieta, M.; Hedley, P.E.; Ramsay, L.; Waugh, R. (2021) Barley anther and meiocyte transcriptome dynamics in meiotic prophase I., Frontiers in Plant Science, 11, Article No. 619404.
- McCouch, S.; Navabi, K.; Abberton, M.; Anglin, N.L.; Barbieri, R.L.; Baum, M.; Bett, K.; Booker, H.; Brown, G.L.; Bryan, G.J.; Cattivelli, L.; Charest, D.; Eversole, K.; Freitas, M.; Ghamkhar, K.; Grattapaglia, D.; Henry, R.; Inglis, M.C.V.; Islam, T.; Kehel, Z.; Kersey, P.J.; King, G.J.; Kresovich, S.; Marden, E.; Mayes, S.; Ndjiondjop, M.N.; Nguyen, H.T.; Paiva, S.R.; Papa, R.; Phillips, P.W.B.; Rasheed, A.; Richards, C.; Rouard, M.; Sampaio, M.J.A.S.; Scholz, U.; Shaw, P.D.; Sherman, B.; Staton, S.E.; Stein, N.; Svensson, J.; Tester, M.; Valls, J.F.M.; Varshney, R.; Visscher, S.; von Wettberg, E.; Waugh, R. (2020) Mobilizing crop biodiversity., Molecular Plant, 13, 1341-1344.
- Arrieta, M; Willems, G; DePessemier, G; Colas, I; Burkholz, A; Darracq, A; Vanstraelen, S; Pacolet, P; Barre, C; Kempeneers, P; Waugh, R; Barnes, S; Ramsay, L (2020) The effect of heat stress on sugar beet recombination., Theoretical and Applied Genetics. Published online
- Looseley, M.E.; Ramsay, L.; Bull, H.; Swanston, J.S.; Shaw, P.D.; Macaulay, M.; Booth, A.; Russell, J.R.; Waugh, R.; Thomas, W.T.B. (2020) Association mapping of malting quality traits in UK spring and winter barley cultivar collections., Theoretical and Applied Genetics, 133, 2567-2582.
- Garcia-Gimenez, G.; Russell, J.; Aubert, M.K.; Fincher, G.B.; Burton, R.A.; Waugh, R.; Tucker, M.R.; Houston, K. (2019) Barley grain (1,3;1,4)-beta-glucan content: effects of transcript and sequence variation in genes encoding the corresponding synthase and endohydrolase enzymes., Scientific Reports, 9, Article No. 17250.
- Schreiber, M.; Barakate, A.; Uzrek, N.; Macaulay, M.; Sourdille, A.; Morris, J.; Hedley, P.E.; Ramsay, L.; Waugh, R. (2019) A highly mutagenised barley (cv. Golden Promise) TILLING population coupled with strategies for screening-by-sequencing., Plant Methods, 15, Article No. 99.
- Patil, V.; McDermott, H.I.; McAllister, T.; Cummins, M.; Silva, J.C.; Mollison, E.; Meikle, R.; Morris, J.; Hedley, P.E.; Waugh, R.; Dockter, C.; Hansson, M.; McKim, S.M. (2019) APETALA2 control of barley internode elongation., Development, 146, Article No. dev170373.
- Pont, C.; Leroy, T.; Seidel, M.; Tondelli, A.; Duchemin, W.; Armisen, D.; Lang, D.; Bustos-Korts, D.; Goue, N.; Balfourier, F.; Molnar-Lang, M.; Lage, J.; Kilian, B.; Ozkan, H.; Waite, D.; Dyer, S.; Letellier, T.; Alaux, M.; Russell, J.; Keller, B.; van Eeuwijk, F.; Spannagl, M.; Mayer, K.F.X.; Waugh, R.; Stein, N.; Cattivelli, L.; Haberer, G.; Charmet, G.; Salse, J. (2019) Tracing the ancestry of modern bread wheats., Nature Genetics, 51, 905-911.
- Darrier, B.; Russel, J.; Milner, S.G.; Hedley, P.E.; Shaw, P.D.; Macaulay, M.; Ramsay, L.D.; Halpin, C.; Mascher, M.; Fleury, D.L.; Langridge, P.; Stein, N.; Waugh, R. (2019) A comparison of mainstream genotyping platforms for the evaluation and use of barley genetic resources., Frontiers in Plant Science, 10, Article No. 544.
- Langridge, P.; Waugh, R. (2019) Harnessing the potential of germplasm collections., Nature Genetics, 51, 200-201.
- Bustos-Korts, D.; Dawson, I.K.; Russell, J.; Tondelli, A.; Guerra, D.; Ferrandi, C.; Strozzi, F.; Nicolazzi, E.L.; Molnar-Land, M.; Ozkan, H.; Megyen, M.; Miko, P.; Cakur, E.; Yaksir, E.; Trabanco, N.; Delbono, S.; Kyriakidis, S.; Booth, A.; Cammarano, D.; Mascher, M.; Werner, P.; Cattivelli, L.; Rossini, L.; Stein, N.; Kilian, B.; Waugh, R.; van Eeuwijk, F.A. (2019) Exome sequences and multi-environment field trials elucidate the genetic basis of adaptation in barley., The Plant Journal, 99, 1172-1191.
- Coulter, M.; Buttner, B.; Hofmann, K.; Bayer, M.; Ramsay, L.; Schweizer, G.; Waugh, R.; Looseley, M.E.; Avrova, A. (2019) Characterisation of barley resistance to rhynchosporium on chromosome 6HS., Theoretical and Applied Genetics, 132, 1089-1107.
- Lewandowska, D.; Zhang, R.; Colas, I.; Uzrek, N.; Waugh, R. (2019) Application of a sensitive and reproducible label-free proteomic approach to explore the proteome of individual meiotic-phase barley anthers., Frontiers in Plant Science, 10, Article No. 393.
- Rapazote-Flores, P.; Bayer, M.; Milne, L.; Mayer, C-D.; Fuller, J.; Guo, W.; Hedley, P.E.; Morris, J.; Halpin, C.; Kam, J.; McKim, S.M.; Zwirek, M.; Casao, C.; Barakate, A.; Schreiber, M.; Stephen, G.; Zhang, R.; Brown, J.W.S.; Waugh, R.; Simpson, C.G. (2019) BaRTv1.0: a barley reference transcript dataset for quantitative measurement barley transcriptomes using RNA-seq., BMC Genomics, 20, Article No. 968.
- Zwirek, M.; Waugh, R.W.; McKim, S.M. (2019) Interaction between row-type genes in barley controls meristem determinacy and reveals novel routes to improved grain., New Phytologist, 221, 1950-1965.
- Daly, P.; McClellan, C.; Maluk, M.; Oakey, H.; Lapierre, C.; Waugh, R.; Stephens, J.; Marshall, D.; Barakate, A.; Tsuji, Y.; Goeminne, G.; Vanholme, R.; Boerjan, W.; Ralph, J.; Halpin, C. (2019) RNAi-suppression of barley caffeic acid O-methyltransferase modifies lignin despite redundancy in the gene family., Plant Biotechnology Journal, 17, 594-607.
- Colas, I.; Barakate, A.; Macaulay, M.; Schreiber, M.; Stephens, J.; Vivera, S.; Halpin, C.; Waugh, R.; Ramsay, L. (2019) Desynaptic5 carries a spontaneous semi-dominant mutation affecting Disrupted Meiotic cDNA 1 (DMC1) in barley., Journal of Experimental Botany, 70, 2683-2698.
- De la Fuente Canto, C.; Russell, J.; Hackett, C.A.; Booth, A.; Dancey, S.; George, T.S.; Waugh, R. (2018) Genetic dissection of quantitative and qualitative traits using a minimum set of barley recombinant chromosome substitution lines., BMC Plant Biology, 18, Article No. 340.
- De La Fuente Canto, C.; Kalogiros, D.I.; Ptashnyk, M.; George, T.S.; Waugh, R.; Bengough, A.G.; Russell, J.; Dupuy, L.X. (2018) Morphological and genetic characterisation of the root system architecture of selected barley recombinant chromosome substitution lines using an integrated phenotyping approach., Journal of Theoretical Biology, 447, 84-97.
- Prade, V.M.; Gundlach, H.; Twardziok, S.; Chapman, B.; Tan, C.; Langridge, P.; Schulman, A.H.; Stein, N.; Waugh, R.; Zhang, G.; Platzer, M.; Li, C.; Spannagl, M.; Mayer, K.F.X. (2018) The pseudogenes of barley., The Plant Journal, 93, 502-514.
- Looseley, M.E.; Griffe, L.L.; Buttner, B.; Wright, K.M.; Middlefell-Williams, J.; Bull, H.; Shaw, P.D.; Macaulay, M.; Booth, A.; Schweizer, G.; Russell, J.R.; Waugh, R.; Thomas, W.T.B.; Avrova, A. (2018) Resistance to Rhynchosporium commune in a collection of European spring barley germplasm., Theoretical and Applied Genetics, 131, 2513-2528.
- Okagaki, R.J.; Haaning, A.; Bilgic, H.; Heinen, S.; Druka, A.; Bayer, M.; Waugh, R.; Muehlbauer, G.J. (2018) ELIGULUM-A regulates lateral branch and leaf development in barley., Plant Physiology, 176, 2750-2760.
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