Publications list

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2018

Wang H, Yang ZL, Du S, Ma L, Liao Y, Wang YJ, Toth I, Fan JQ. 2018. Characterization of Pectobacterium carotovorum proteins differentially expressed during infection of Zantedeschia elliotiana in vivo and in vitro which are essential for virulence. Molecular Plant Pathology. 19:35-48.

Fronzek S, Pirttioja N, Carter TR, Bindi M, Hoffmann H, Palosuo T, Ruiz-Ramos M, Tao F, Trnka M, Acutis M et al.. 2018. Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change. Agricultural Systems. 159:209-224.

Zhang L, Ding X, Peng Y, George TS, Feng G. 2018. Closing the loop on phosphorus loss from intensive agricultural soil: a microbial immobilization solution? Frontiers in Microbiology. 9:ArticleNo.4..

Clarke HV, Foster SP, Oliphant L, Waters EW, Karley AJ. 2018. Co-occurrence of defensive traits in the potato aphid Macrosiphum euphorbiae. Ecological Entomology. 43:538-542.

Creamer E, Eadson W, van Veelen B, Pinker A, Tingey M, Braunholtz-Speight T, Markantoni M, Foden M, Lacey-Barnacle M. 2018. Community energy: entanglements of community, state and private sectors. Geography Compass. 12:ArticleNo.e12378.

Herzig P, Maurer A, Draba V, Sharma R, Draicchio F, Bull H, Milne L, Thomas WTB, Flavell AJ, Pillen K. 2018. Contrasting genetic regulation of plant development in wild barley grown in two European environments revealed by nested association mapping. Journal of Experimental Botany. 69:1517-1531.

Tao FL, Rotter RP, Palosuo T, Diaz-Ambrona CGH, Minguez MI, Semenov MA, Kersebaum KC, Nendel C, Specka X, Hoffmann H et al.. 2018. Contribution of crop model structure, parameters and climate projections to uncertainty in climate change impact assessments. Global Change Biology. 24:1291-1307.

Mitchell RJ, Hewison RL, Fielding DA, Fisher JM, Gilbert DJ, Hurskainen S, Pakeman RJ, Potts JM, Riach D. 2018. Decline in atmospheric sulphur deposition and changes in climate are the major drivers of long-term change in grassland plant communities in Scotland. Environmental Pollution. 235:956-964.

Isaac NJB, Brotherton PNM, Bullock JM, Gregory RD, Boehning-Gaese K, Connor B, Crick HQP, Freckleton RP, Gill JA, Hails RS et al.. 2018. Defining and delivering resilient ecological networks: nature conservation in England. Journal of Applied Ecology. Published online..

Forsmoo J, Anderson K, Macleod CJA, Wilkinson ME, Brazier R. 2018. Drone-based structure-from-motion photogrammetry captures grassland sward height variability. Journal of Applied Ecology. 55:2587-2599.

Pages M, Fischer A, van der Wal R. 2018. The dynamics of volunteer motivations for engaging in the management of invasive plants: insights from a mixed-methods study on Scottish seabird islands. Journal of Environmental Planning and Management. 61:904-923.

Pagès M, Fischer A, van der Wal R. 2018. The dynamics of volunteer motivations for engaging in the management of invasive plants: insights from a mixed-methods study on Scottish seabird islands. Journal of Environmental Planning and Management. 61:904-923.

Maxwell J, Allen S, Brooks T, Cuttelod A, Dudley N, Fisher J, Langhammer P, Patenaude G, Woodley S. 2018. Engaging end-users to inform the development of a global standard for the identification of key biodiversity areas. Environmental Science and Policy. 89:273-282.

Hodgson ID, Redpath SM, Fischer A, Young J. 2018. Fighting talk - organisational discourses of the conflict over raptors and grouse moor management in Scotland. Land Use Policy. 77:332-343.

Buijs A, Fischer A, Muhar A. 2018. From urban gardening to planetary stewardship: human-nature relationships and their implications for environmental management. Journal of Environmental Planning and Management. 61:747-755.

Xu X, Sharma R, Tondelli A, Russell J, Comadran J, Schnaithmann F, Pillen K, Kilian B, Cattivelli L, Thomas WTB et al.. 2018. Genome-wide association analysis of grain yield-associated traits in a Pan-European barley cultivar collection. Plant Genome. 11:ArticleNo.UNSP170073.

Sharma R, Draicchio F, Bull H, Herzig P, Maurer A, Pillen K, Thomas WTB, Flavell AJ. 2018. Genome-wide association of yield traits in a nested association mapping population of barley reveals new gene diversity for future breeding. Authors. Journal of Experimental Botany. 69:3811-3822.

Pascoalino JAL, Thompson JA, Wright G, Franco FA, Scheeren PL, Pauletti V, Moraes MF, White PJ. 2018. Grain zinc concentrations differ among Brazilian wheat genotypes and respond to zinc and nitrogen supply. PLoS ONE. 13:ArticleNo.e0199464.

Dengler J, Wagner V, Dembicz I, García-Mijangos I, Naqinezhad A, Boch S, Chiarucci A, Conradi T, Filibeck G, Guarino R et al.. 2018. GrassPlot - a database of multi-scale plant diversity in Palaearctic grasslands. Phytocoenologia. 48:331-347.

Folimonova SY, Tilsner J. 2018. Hitchhikers, highway tolls and roadworks: the interactions of plant viruses with the phloem. Current Opinion in Plant Biology. 43:82-88.

Kallscheuer N, Menezes R, Foito A, Silva MH, Braga A, Dekker W, Sevillano DM, Rosado-Ramos R, Jardim C, Oliveira J et al.. 2018. Identification and microbial production of the raspberry phenol Salidroside that is active against Huntington’s Disease. Plant Physiology. 179:969-985.

Freitag S, Verrall SR, Pont SDA, McRae D, Sungartas JA, Palau R, Hawes C, Alexander CJ, Allwood JW, Foito A et al.. 2018. Impact of conventional and integrated management systems on the water-soluble vitamin content in potatoes, field beans and cereals. Journal of Agricultural and Food Chemistry. 66:831-841.

De Clerck O, Kao SM, Bogaert KA, Blomme J, Foflonker F, Kwantes M, Vancaester E, Vanderstraeten L, Aydogdu E, Boesger J et al.. 2018. Insights into the evolution of multicellularity from the sea lettuce genome. Current Biology. 28:2921-2933.

Bournaud C, James EK, de Faria SM, Lebrun M, Melkonian R, Duponnois R, Tisseyre P, Moulin L, Prin Y. 2018. Interdependency of efficient nodulation and arbuscular mycorrhization in Piptadenia gonoacantha, a Brazilian legume tree. Plant Cell and Environment. 41:2008-2020.

da C. Souza I, Arrivabene HP, Craig CA, Midwood AJ, Thornton B, Matsumoto ST, Elliott M, Wunderlin DA, MonferránM.V, Fernandes MN. 2018. Interrogating pollution sources in a mangrove food web using multiple stable isotopes. Science of the Total Environment. 640-641:501-511.

Dey T, Saville A, Myers K, Tewari S, Cooke DEL, Tripathy S, Fry WE, Ristaino JB, Guha Roy S. 2018. Large sub-clonal variation in Phytophthora infestans from recent severe late blight epidemics in India. Scientific Reports. 8:ArticleNo.4429.

Holland JE, Bennett AE, Newton AC, White PJ, McKenzie BM, George TS, Pakeman RJ, Bailey JS, Fornara DA, Hayes RC. 2018. Liming impacts on soils, crops and biodiversity in the UK: a review. Science of the Total Environment. 610-611:316-332.

Fuechtbauer W, Yunusov T, Bozsoki Z, Gavrin A, James EK, Stougaard J, Schornack S, Radutoiu S. 2018. LYS12 LysM receptor decelerates Phytophthora palmivora disease progression in Lotus japonicus. Plant Journal. 93:297-310.

de Moraes MT, Bengough AG, Debiasi H, Franchini JC, Levien R, Schnepf A, Leitner D. 2018. Mechanistic framework to link root growth models with weather and soil physical properties, including example applications to soybean growth in Brazil. Plant and Soil. 428:67-92.

Foito A, Stewart D. 2018. Metabolomics: A high-throughput screen for biochemical and bioactivity diversity in plants and crops. Current Pharmaceutical Design. 24:2043-2054.

Cameron A, Logie L, Patel K, Erhardt S, Bacon S, Middleton P, Harthill J, Forteath C, Coats JT, Kerr C et al.. 2018. Metformin selectively targets redox control of complex I energy transduction. Redox Biology. 14:187-197.

Hollaway MJ, Beven KJ, Benskin CMH, Collins AL, Evans R, Falloon PD, Forber KJ, Hiscock KM, Kahana R, Macleod CJA et al.. 2018. A method for uncertainty constraint of catchment discharge and phosphorus load estimates. Hydrological Processes. 32:2779-2787.

Kettle H, Holtrop G, Louis P, Flint HJ. 2018. microPop: Modelling microbial populations and communities in R. Methods in Ecology and Evolution. 9:399-409.

Wallach D, Martre P, Liu B, Asseng S, Ewert F, Thorburn PJ, Ittersum M, Aggarwal PK, Ahmed M, Basso B et al.. 2018. Multimodel ensembles improve predictions of crop-environment-management interactions. Global Change Biology. 24:5072-5083.

Britton AJ, Mitchell RJ, Fisher JM, Riach DJ, Taylor AFS. 2018. Nitrogen deposition drives loss of moss cover in alpine moss-sedge heath via lowered C: N ratio and accelerated decomposition. New Phytologist..

Manfreda S, McCabe ME, Miller PE, Lucas R, Madrigal VP, Mallinis G, Dor E, Helman D, Estes L, Ciraolo G et al.. 2018. On the use of unmanned aerial systems for environmental monitoring. Remote Sensing. 10:ArticleNo.641.

George TS, Giles CD, Menezes-Blackburn D, Condron LM, Gama-Rodrigues AC, Jaisi D, Lang F, Neal AL, Stutter MI, Almeida DS et al.. 2018. Organic phosphorus in the terrestrial environment: a perspective on the state of the art and future priorities. Plant and Soil. 427:191-208.

Silva VM, Boleta EHM, Bereta MGD, Lavres J, Martins JT, Santos EF, dos Santos FLM, Putti FF, Furlani E, White PJ et al.. 2018. Physiological, biochemical, and ultrastructural characterization of selenium toxicity in cowpea plants. Environmental and Experimental Botany. 150:172-182.

Silva VM, Boleta EHM, Bereta MGD, Lavres J, Martins JT, Santos EF, dos Santos FLM, Putti FF, Furlani E, White PJ et al.. 2018. Physiological, biochemical, and ultrastructural charcterization of selenium toxicity in cowpea plants. Environmental and Experimental Botany. 150:172-182.

Giampieri F, Afrin S, Stewart D, McDougall GJ, Brennan R, Blyth L, Gasparrini M, Mazzoni L, Capocasa F, Alvarez-Suarez JM et al.. 2018. Phytochemical composition and cytotoxic effects on liver hepatocellular carcinoma cells of different berries following a simulated in vitro gastrointestinal digestion. Molecules. 23:ArticleNo.1918..

Mideros MF, Turissini DA, Guayazán N, Ibarra-Avila H, Danies G, Cárdenas M, Myers K, Tabima J, Goss EM, Bernal A et al.. 2018. Phytophthora betacei, a new species within Phytophthora clade 1c causing late blight on Solanum betaceum in Colombia. Persoonia - Molecular Phylogeny and Evolution of Fungi. 41:39-55.

McLean K, Palarea-Albaladejo J, Currie CG, Imrie LHJ, Manson EDT, Fraser-Pitt D, Wright F, Alexander CJ, Pollock KGJ, Allison L et al.. 2018. Rapid and robust analytical protocol for E-coli STEC bacteria subspecies differentiation using whole cell MALDI mass spectrometry. Talanta. 182:164-170.

Karpinska B, Zhang KM, Rasool B, Pastok D, Morris J, Verrall SR, Hedley PE, Hancock RD, Foyer CH. 2018. The redox state of the apoplast influences the acclimation of photosynthesis and leaf metabolism to changing irradiance. Plant Cell and Environment. 41:1083-1097.

Minasny B, Arrouays D, McBratney AB, Angers DA, Chambers A, Chaplot V, Chen ZS, Cheng K, Das BS, Field DJ et al.. 2018. Rejoinder to Comments on Minasny et al., 2017 Soil carbon 4 per mille. Geoderma, 292, 59-86. Geoderma. 309:124-129.

Huber R, Bakker M, Balmann A, Berger T, Bithell M, Britz W, Brown C, Grêt-Regamey A, Hang X, Le QB et al.. 2018. Representation of decision-making in European agricultural agent-based models. Agricultural Systems. 167:143-160.

Fieber KD, Mills JP, Miller PE, Clarke L, Ireland L, Fox AJ. 2018. Rigorous 3D change determination in Antarctic Peninsula glaciers from stereo WorldView-2 and archival aerial imagery. Remote Sensing of Environment. 205:18-31.

Taylor-Davis K, Callaway RM, Fajardo A, Pauchard A, Nunez MA, Brooker RW, Maxwell BD, Dimarco RD, Peltzer DA, Mason B et al.. 2018. Severity of impacts of an introduced species corresponds with regional eco-evolutionary experience. Ecography. 42:1-11.

Craig T, Fischer A, Lorenzo-Arribas A. 2018. Shopping versus being in nature? An exploratory study of everyday experiences Frontiers in Psychology.

Craig T, Fischer A, Lorenzo-Arribas A. 2018. Shopping versus being in nature? An exploratory study of everyday experiences Frontiers in Psychology. 9:Article9.

Seserman DM, Pohle I, Veste M, Freese D. 2018. Simulating climate change impacts on hybrid-poplar and black locust short rotation coppices. Forests. 9:ArticleNo.419.

Ghaley BB, Wösten H, Olesen JE, Schelde K, Baby S, Karki YK, Børgesen CD, Smith P, Yeluripati J, Ferrise R et al.. 2018. Simulation of soil organic carbon effects on long-term winter wheat (Triticum aestivum) production under varying fertilizer inputs. Frontiers in Plant Science. 9:ArticleNo.1158.

Fischer A, Spekkink W, Polzin C, Diaz-Ayude A, Brizi A, Macsinga I. 2018. Social representations of governance for change towards sustainability: perspectives of sustainability advocates. Environmental Politics. 27:621-643.

Pires RD, dos Reis FB, Zilli JE, Fischer D, Hofmann A, James EK, Simon MF. 2018. Soil characteristics determine the rhizobia in association with different species of Mimosa in central Brazil. Plant and Soil. 423:411-428.

Spezia L, Friel N, Gimona A. 2018. Spatial hidden Markov models and species distributions. Journal of Applied Statistics. 45:1595-1615.

Fang SB, Cammarano D, Petropoulos G. 2018. Special section guest editorial: Recent advances in earth observation technologies for agrometeorology and agroclimatology. Journal of Applied Remote Sensing. 12:ArticleNo.022201.

Faccioli M, Kuhfuss L, Czajkowski M. 2018. Stated preferences for conservation policies under uncertainty: insights on individuals’ risk attitudes in the environmental domain. Environmental and Resource Economics. Published online..

von der Luhe B, Birk JJ, Dawson LA, Mayes RW, Fiedler S. 2018. Steroid fingerprints: Efficient biomarkers of human decomposition fluids in soil. Organic Geochemistry. 124:228-237.

Langan C, Farmer J, Rivington M, Smith J. 2018. Tropical wetland ecosystem service assessments in East Africa; A review of approaches and challenges. Environmental Modelling and Software. 102:260-273.

Yuan JJ, Lu YL, Ferrier RC, Liu ZY, Su HQ, Meng J, Song S, Jenkins A. 2018. Urbanization, rural development and environmental health in China. Environmental Development. 28:101-110.

Hernandez AD, Boag B, Neilson R, Forrester NL. 2018. Variable changes in nematode infection prevalence and intensity after rabbit haemorrhagic disease virus emerged in wild rabbits in Scotland and New Zealand. International Journal for Parasitology: Parasites and Wildlife. 7:187-195.

Dicks LV, Rose DC, Ang F, Aston S, Birch ANE, Boatman N, Bowles EL, Chadwick D, Dinsdale A, Durham S et al.. 2018. What agricultural practices are most likely to deliver ‘sustainable intensification’ in the UK? Food and Energy Security. Published online..

2017

Jardim C, Macedo D, Figueira I, Dobson G, McDougall GJ, Stewart D, Ferreira RB, Menezes R, Santos CN. 2017. (Poly)phenol metabolites from Arbutus unedo leaves protect yeast from oxidative injury by activation of antioxidant and protein clearance pathways. Journal of Functional Foods. 32:333-346.

Ruiz-Ramos M, Ferrise R, Rodriguez A, Lorite IJ, Bindi M, Carter TR, Fronzek S, Palosuo T, Pirttioja N, Baranowski P et al.. 2017. Adaptation response surfaces for managing wheat under perturbed climate and CO2 in a Mediterranean environment. Agricultural Systems. Published online..

Merante P, Dibari C, Ferrise R, Sanchez B, Iglesias A, Lesschen J, Kuikman P, Yeluripati J, Smith P, Bindi M. 2017. Adopting soil organic carbon management practices in soils of varying quality: implications and perspectives in Europe. Soil and Tillage Research. 165:95-106.

Nicolas WJ, Grison MS, Trépout S, Gaston A, Fouché M, Cordelières FP, Oparka K, Tilsner J, Brocard L, Bayer EM. 2017. Architecture and permeability of post-cytokinesis plasmodesmata lacking cytoplasmic sleeves. Nature Plants. 3:ArticleNo.17082.

Pagaling E, Vassileva K, Mills CG, Bush T, Blythe RA, Schwarz-Linek J, Strathdee F, Allen RJ, Free A. 2017. Assembly of microbial communities in replicate nutrient-cycling model ecosystems follows divergent trajectories, leading to alternate stable states. Environmental Microbiology. 19:3374-3386.

Sarkki S, Ficko A, Wielgolaski FE, Abraham EM, Bratanova-Doncheva S, Grunewald K, Hofgaard A, Holtmeier FK, Kyriazopoulos AP, Broll G et al.. 2017. Assessing the resilient provision of ecosystem services by social-ecological systems: introduction and theory. Climate Research. 73:7-15.

Neacsu M, McMonagle J, Fletcher RJ, Hulshof T, Duncan SH, Scobbie L, Duncan GJ, Cantlay L, Horgan G, de Roos B et al.. 2017. Availability and dose response of phytophenols from a wheat bran rich cereal product in healthy human volunteers. Molecular Nutrition and Food Research. 61:ArticleNo.UNSP1600202.

Bull H, Casao MC, Zwirek M, Flavell AJ, Thomas WTB, Guo WB, Zhang RX, Rapazote-Flores P, Kyriakidis S, Russell J et al.. 2017. Barley SIX-ROWED SPIKE3 encodes a putative Jumonji C-type H3K9me2/me3 demethylase that represses lateral spikelet fertility. Nature Communications. 8:ArticleNo.936.

Garcia G, Nanni S, Figueira I, Ivanov I, McDougall GJ, Stewart D, Ferreira RB, Pinto P, Silva RFM, Brites D et al.. 2017. Bioaccessible (poly)phenol metabolites from raspberry protect neural cells from oxidative stress and attenuate microglia activation. Food Chemistry. 215:274-283.

Jamieson AJ, Malkocs T, Piertney SB, Fujii T, Zhang ZL. 2017. Bioaccumulation of persistent organic pollutants in the deepest ocean fauna. Nature Ecology and Evolution. 1:ArticleNo.0051.

Eastwood A, Fischer A, Byg A. 2017. The challenges of participatory and systemic environmental management: from aspiration to implementation. Journal of Environmental Planning and Management. 60:1683-1701.

Mascher M, Gundlach H, Himmelbach A, Beier S, Twardziok SO, Wicker T, Radchuk V, Dockter C, Hedley PE, Russell J et al.. 2017. A chromosome conformation capture ordered sequence of the barley genome. Nature. 544:427-433.

Westerink J, Jongeneel R, Polman N, Prager K, Franks J, Dupraz P, Mettepenningen E. 2017. Collaborative governance arrangements to deliver spatially coordinated agri-environmental management. Land Use Policy. 69:175-192.

Fischer A, Holstead K, Hendrickson CY, Virkkula O, Prampolini A. 2017. Community-led initiatives' everyday politics for sustainability - conflicting rationalities and aspirations for change. Environment and Planning A. 49:1986-2006.

Fyfe L, Okoro P, Paterson E, Coyle S, McDougall GJ. 2017. Compositional analysis of Scottish honeys with antimicrobial activity against antibiotic-resistant bacteria reveals novel antimicrobial components. LWT - Food Science and Technology. 79:52-59.

Beier S, Himmelbach A, Colmsee C, Zhang XQ, Barrero RA, Zhang QS, Li L, Bayer M, Bolser D, Taudien S et al.. 2017. Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data. 4:ArticleNo.170044.

Calladine J, Humphreys EM, Gilbert L, Furness RW, Robinson RA, Fuller RJ, Littlewood NA, Pakeman RJ, Ferguson J, Thompson C. 2017. Continuing influences of introduced hedgehogs Erinaceus europaeus as a predator of wader (Charadrii) eggs four decades after their release on the Outer Hebrides, Scotland. Biological Invasions. 19:1981-1987.

Rathore R, Dowling DN, Forristal PD, Spink J, Cotter PD, Bulgarelli D, Germaine KJ. 2017. Crop establishment practices are a driver of the plant microbiota in winter oilseed rape (Brassica napus). Frontiers in Microbiology. 8:ArticleNo.1489.

Hudson LN, Newbold T, Contu S, Hill SLL, Lysenko I, De Palma A, Phillips HRR, Alhusseini TI, Bedford FE, Bennett DJ et al.. 2017. The database of the PREDICTS (Projecting Responses of ecological Diversity in Changing Terrestrial Systems). Ecology and Evolution. 7:145-188.

Wijedasa LS, Jauhiainen J, Kononen M, Lampela M, Vasander H, LeBlanc MC, Evers S, Smith TEL, Yule CM, Varkkey H et al.. 2017. Denial of long-term issues with agriculture on tropical peatlands will have devastating consequences. Global Change Biology. 23:977-982.

Tao FL, Rotter RP, Palosuo T, Diaz-Ambrona CGH, Minguez MI, Semenov MA, Kersebaum KC, Nendel C, Cammarano D, Hoffmann H et al.. 2017. Designing future barley ideotypes using a crop model ensemble. European Journal of Agronomy. 82:144-162.

Forber KJ, Ockenden MC, Wearing C, Hollaway MJ, Falloon PD, Kahana R, Villamizar ML, Zhou JG, Withers PJA, Beven KJ et al.. 2017. Determining the effect of drying time on phosphorus release from agricultural soils under climate change scenarios. Journal of Environmental Quality. 46:1131-1136.

Ferdous J, Sanchez-Ferrero JC, Langridge P, Milne L, Chowdhury J, Brien C, Tricker PJ. 2017. Differential expression of microRNAs and potential targets under drought stress in barley. Plant Cell and Environment. 40:11-24.

Kawaharada Y, Nielson MW, Kelly S, James EK, Andersen KR, Rasmussen SR, Fuchtbauer W, Madsen LH, Heckmann AB, Radutoiu S et al.. 2017. Differential regulation of the Epr3 receptor coordinates membrane - restricted rhizobial colonization of root nodule primordia. Nature Communications. 8:ArticleNo.14534..

Lechenet M, Deytieux V, Antichic D, Aubertot JN, Bàrberi B, Bertrand M, Cellier V, Charles R, Colnenne-David C, Dachbrodt-Saaydeh S et al.. 2017. Diversity of methodologies to experiment Integrated Pest Management in arable cropping systems: analysis and reflections based on a European network. European Journal of Agronomy. 83:86-99.

Redpath SM, Linnell JDC, Festa-Bianchet M, Boitani L, Bunnefeld N, Dickman A, Gutiérrez RJ, Irvine RJ, Johansson M, Majic A et al.. 2017. Don't forget to look down - collaborative approaches to predator conservation. Biological Reviews. Published online..

Vannucchi PE, Peralta-Maraver I, de Figueroa JMT, Lopez-Rodrigueza MJ. 2017. Dynamics of the macroinvertebrate community and food web of a Mediterranean stream. Journal of Freshwater Ecology. 32:223-239.

Shuzhong G, Jenkins A, Gao SJ, Lu Y, Li H, Li Y, Ferrier RC, Bailey M, Wang Y, Zhang Y et al.. 2017. Ensuring water resource security in China; the need for advances in evidence-based policy to support sustainable management. Environmental Science and Policy. 75:65-69.

Gu SZ, Jenkins A, Gao SJ, Lu YL, Li H, Li YY, Ferrier RC, Bailey M, Wang YW, Zhang Y et al.. 2017. Ensuring water resource security in China; the need for advances in evidence-based policy to support sustainable management. Environmental Science and Policy. 75:65-69.

Mitchell RJ, Hewison RL, Britton AJ, Brooker RW, Cummins RP, Fielding DA, Fisher JM, Gilbert DJ, Hester AJ, Hurskainen S et al.. 2017. Forty years of change in Scottish grassland vegetation: increased richness, decreased diversity and increased dominance. Biological Conservation. 212:327-336.

Begg GS, Cook SM, Dye R, Ferrante M, Franck P, Lavigne C, Lovei GL, Mansion-Vaquie A, Pell JK, Petit S et al.. 2017. A functional overview of conservation biological control. Crop Protection. 97:145-158.

Kerr PJ, Cattadori IM, Rogers MB, Fitch A, Geber A, Liu J, Sim DG, Boag B, Eden JS, Ghedin E et al.. 2017. Genomic and phenotypic characterization of myxoma virus from Great Britain reveals multiple evolutionary pathways distinct from those in Australia. PLoS Pathogens. 13:ArticleNo.e1006252.

Zhang RX, Calixto CPG, Marquez Y, Venhuizen P, Tzioutziou NA, Guo WB, Spensley M, Entizne JC, Lewandowska D, Ten Have S et al.. 2017. A high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing. Nucleic Acids Research. 45:5061-5073.

Sarkki S, Ficko A, Grunewald K, Kyriazopoulos A, Nijnik M. 2017. How pragmatism in environmental science and policy can undermine sustainability transformations: the case of marginalized mountain areas under climate and land use change. Sustainability Science. 12:549-561.

Kaczmareka M, Piotrowska MJ, Fountaine JM, Gorniak K, McGrann GRD, Armstrong A, Wright KM, Newton AC, Harvis ND. 2017. Infection strategy of Ramularis collo-cygni and development of Ramularia leaf spot on barley and alternate graminaceous hosts. Plant Pathology. 66:45-55.

Delgado-Baquerizo M, Reich PB, Khachane AN, Campbell CD, Thomas N, Freitag TE, Al-Soud WA, Sorensen SJ, Bardgett RD, Singh BK. 2017. It is elemental: soil nutrient stoichiometry drives bacterial diversity. Environmental Microbiology. 19:1176-1188.

Pakeman RJ, Hewison RL, Riach D, Fisher J, Hurskianen S, Fielding D, Mitchell RJ. 2017. Long-term functional structure and functional diversity changes in Scottish grasslands. Agriculture, Ecosystems and Environment. 247:352-362.

Pakeman RJ, Hewison RL, Riach D, Fisher J, Hurskianen S, Fielding D, Mitchell RJ. 2017. Long-term structural and functional diversity changes in Scottish grasslands. Agriculture, Ecosystems and Environment. 247:352-362.

Ockenden MC, Hollaway MJ, Beven KJ, Collins AL, Evans R, Falloon PD, Forber KJ, Hiscock KM, Kahana R, Macleod CJA et al.. 2017. Major agricultural changes required to mitigate phosphorus losses under climate change. Nature Communications. 8:ArticleNo,161.

Hurst CH, Turnbull D, Plain F, Fuller W, Hemsley PA. 2017. Maleimide scavenging enhances determination of protein S-palmitoylation state in acyl-exchange methods. Biotechniques. 62:69-75.

Joynson R, Pritchard L, Osemwekha E, Ferry N. 2017. Metagenomic analysis of the gut microbiome of the common black slug arion ater in search of novel lignocellulose degrading enzymes. Frontiers in Microbiology. 9:ArticleNo.2181.

Rowe EC, Jones L, Dise NB, Evans CD, Mills G, Hall J, Stevens CJ, Mitchell RJ, Field C, Caporn SJ et al.. 2017. Metrics for evaluating the ecological benefits of decreased nitrogen deposition. Biological Conservation. 212:454-463.

Demaneche S, Schauser L, Dawson LA, Franqueville L, Simonet P. 2017. Microbial soil community analyses for forensic science: application to a blind test. Forensic Science International. 270:153-158.

Tadie D, Fischer A. 2017. Natural resource governance in lower Omo, Ethiopia - negotiation processes instead of property rights and rules? International Journal of the Commons. 11:ArticleNo.716.

Franco-Orozco B, Berepiki A, Ruiz O, Gamble L, Griffe LL, Wang SM, Birch PRJ, Kanyuka K, Avrova A. 2017. A new proteinaceous pathogen-associated molecular pattern (PAMP) identified in Ascomycete fungi induces cell death in Solanaceae. New Phytologist. 214:1657-1672.

Verma A, van der Wal R, Fischer A. 2017. New technological interventions in conservation conflicts: Countering emotions and contested knowledge. Human Ecology. 45:683-695.

Leles SG, Mitra A, Flynn KJ, Stoecker DK, Hansen PJ, Calbet A, McManus GB, Sanders RW, Caron DA, Not F et al.. 2017. Oceanic protists with different forms of acquired phototrophy display contrasting biogeographies and abundance. Proceedings of the Royal Society B, Biological Sciences. 284:ArticleNo.1860.

Faoro H, Menegazzo RR, Battistoni F, Gyaneshwar P, do Amaral FP, Taulé C, Rausch S, Galvão PG, de los Santos C, Mitra S et al.. 2017. The oil-contaminated soil diazotroph Azoarcus olearius DQS-4T if genetically and phenotypically similar to the model grass endophyte Azoarcus sp. BH72. Environmental Microbiology Reports. 9:223-238.

Larson BMH, van der Wal R, Fischer A, Selge S. 2017. Origin might matter; people matter, too. A response to the comment by Rejmanek and Simberloff, 2016. Environmental Conservation. 44:100-101.

Figueira I, Garcia G, Pimpão RC, Terrasso AP, Costa I, Almeida AF, Tavares L, Pais TF, Pinto P, Ventura M et al.. 2017. Polyphenols journey through blood-brain barrier towards neuronal protection. Scientific Reports. 7:ArticleNo.11456.

Eisenhauer N, Antunes PM, Bennett AE, Birkhofer K, Bissett A, Bowker MA, Caruso T, Chen B, Coleman DC, de Boer W et al.. 2017. Priorities for research in soil ecology. Pedobiologia. 63:1-7.

Foito A, Hackett CA, Stewart D, Velmurugan J, Milbourne D, Byrne SL, Barth S. 2017. Quantitative trait loci associated with different polar metabolites in perennial ryegrass - providing scope for breeding towards increasing certain polar metabolites. BMC Genetics. 18:ArticleNo.84.

Fischer A, McKee A. 2017. A question of capacities? Community resilience and empowerment between assets, abilities and relationships Journal of Rural Studies. 54:187-197.

Rasool B, McGowan J, Pastok D, Marcus SE, Morris JA, Verrall SR, Hedley PE, Hancock RD, Foyer CH. 2017. Redox control of aphid resistance through altered cell wall composition and nutritional quality. Plant Physiology. 175:259-271.

Cervellini M, Fiorini S, Cavicchi A, Campetella G, Simonetti E, Chelli S, Canullo R, Gimona A. 2017. Relationships between understory specialist species and local management practices in coppiced forests - evidence from the Italian Apennines. Forest Ecology and Management. 385:35-45.

Busby PE, Soman C, Wagner MR, Friesen ML, Kremer J, Bennett AE, Morsy M, Eisen JA, Leach JA, Dangl JL. 2017. Research priorities for harnessing plant microbiomes in sustainable agriculture. PLoS Biology. 15:ArticeleNo.e2001793.

Minasny B, Malone BP, McBratney AB, Angers DA, Arrouays D, Chambers A, Chaplot V, Chen ZS, Cheng K, Das BS et al.. 2017. Soil carbon 4 per mille. Geoderma. 292:59-86.

Arrouays D, Leenaars JGB, Richer-de-Forges A, Adhikari K, Ballabio C, Greve M, Grundy M, Guerrero E, Hempel J, Hengl T et al.. 2017. Soil legacy data rescue via GlobalSoilMap and other international and national initiatives. GeoResJ. 14:1-19.

Vasileiadis VP, Dachbrodt-Saaydeh S, Kudsk P, Colnenne-David C, Leprince F, Holb IJ, Kierzek R, Furlan L, Loddo D, Melander B et al.. 2017. Sustainability of European winter wheat- and maize-based cropping systems: economic, environmental and social ex-post assessment of conventional and IPM-based systems. Crop Protection. 97:60-69.

Bölscher T, Paterson E, Freitag T, Thornton B, Herrmann AM. 2017. Temperature sensitivity of substrate-use efficiency can result from altered microbial physiology without change to community composition. Soil Biology and Biochemistry. 109:59-69.

von der Luhe B, Fiedler S, Mayes RW, Dawson LA. 2017. Temporal fatty acid profiles of human decomposition fluid in soil. Organic Geochemistry. 111:26-33.

Garcia-Mira R, Dumitru A, Alonso-Betanzos A, Sánchez-Maroño N, Fontenla-Romero O, Craig T, Polhill JG. 2017. Testing scenarios to achieve workplace sustainability goals using backcasting nad agent-based modeling. Environment and Behavior. 49:1007-1037.

Glendell M, McShane G, Farrow L, James MR, Quinton J, Anderson K, Evans M, Benaud P, Rawlins B, Morgan D et al.. 2017. Testing the utility of structure-from-motion photogrammetry reconstructions using small unmanned aerial vehicles and ground photography to estimate the extent of upland soil erosion. Earth Surface Processes and Landforms. Published online..

Fazey I, Moug P, Allen S, Beckman K, Blackwood D, Bonaventura M, Burnett K, Danson M, Fanconer R, Gagnon A et al.. 2017. Transformation in a changing climate: a research agenda. Climate and Development. Published online..

Wang EL, Martre P, Zhao ZG, Ewert F, Maiorano A, Rotter RP, Kimball BA, Ottman MJ, Wall GW, White JW et al.. 2017. The uncertainty of crop yield projections is reduced by improved temperature response functions. Nature Plants. 3:ArticleNo.17102.

Torres C, Faccioli M, Font AR. 2017. Waiting or acting now? The effect on willingness-to-pay of delivering inherent uncertainty information in choice experiments Ecological Economics. 131:231-240.

Flynn KJ, Raven JA. 2017. What is the limit for photoautotrophic plankton growth rates? Journal of Plankton Research. 39:13-22.

Nazir S, Newey S, Irvine RJ, Verdicch F, Davidson P, Fairhurst G, van der Wal R. 2017. WiseEye: Next generation expandable and programmable camera trap platform for wildlife research. PLoS One. 12

Nazir S, Newey S, Irvine RJ, Verdicchio F, Davidson P, Fairhurst G, van der Wal R. 2017. WiseEye: Next generation expandable and programmable camera trap platform for wildlife research. PLoS One. 12

Nazir S, Newey S, Irvine RJ, Verdicchio F, Davidson P, Fairhurst G, van der Wal R. 2017. WiseEye: Next generation expandable and programmable camera trap platform for wildlife research. PLoS OBE. 12:e0169758.

2016

Harris NL, Cock PJA, Lapp H, Chapman B, Davey R, Fields C, Hokamp K, Munoz-Torres M. 2016. The 2015 Bioinformatics Open Source Conference (BOSC 2015). PLoS Computational Biology. 12:e1004691.

Roulston C, Luke GA, de Felipe P, Ruan L, Cope J, Nicholson J, Sukhodub A, Tilsner J, Ryan MD. 2016. "2A-Like' signal sequences mediating translational recoding: a novel form of dual protein targeting. Traffic. 17:923-939.

Sarkki S, Ficko AJ, Grunewald K, Nijnik M. 2016. Benefits from and threats to European treeline ecosystem services: an exploratory study of stakeholders and governance. Regional Environmental Change. 16:2019-2032.

Hannam KD, Kehila D, Millard P, Midwood AJ, Neilsen D, Neilsen GH, Forge TA, Nichol C, Jones MD. 2016. Bicarbonates in irrigation water contribute to carbonate formation and CO2 production in orchard soils under drip irrigation. Geoderma. 266:120-126.

Arts K, Fischer A, van der Wal R. 2016. Boundaries of the wolf and the wild: a conceptual examination of the relationship between rewilding and animal reintroduction. Restoration Ecology. 24:27-34.

Flanigan S, Sutherland LA. 2016. Buying access to social capital? From collaboration to service provision in an agricultural co-operative Sociologia Ruralis. 56:471-490.

Ockenden MC, Deasy CE, Benskin CMH, Beven KJ, Burke S, Collins AL, Evans R, Falloon PD, Forber KJ, Hiscock KM et al.. 2016. Changing climate and nutrient transfers: Evidence from high temporal resolution concentration-flow dynamics in headwater catchments. Science of the Total Environment. 548:325-339.

Pearson KA, Taylor AFS, Fuchs RME, Woodward S. 2016. Characterisation and pathogenicity of Fusarium taxa isolated from ragwort (Jacobaea vulgaris) roots. Fungal Ecology. 20:186-192.

Salvadori C, Finlayson J, Trogu T, Formenti N, Lanfranchi P, Citterio C, Palarea-Albaladejo J, Poli A, Chianini F. 2016. Characterization of immune system cell subsets in fixed tissues from alpine chamois (Rupicapra rupicapra). Journal of Comparative Pathology. 155:207-212.

Hamel S, Gaillard JM, Yoccoz NG, Albon S, Cote SD, Craine JM, Festa-Bianchet M, Garel M, Lee P, Moss C et al.. 2016. Cohort variation in individual body mass dissipates with age in large herbivores. Ecological Monographs. 86:517-543.

Hamel S, Gillard JM, Yoccoz N, Albon SD, Cote SD, Craine JM, Festa-Blanchet M, Garel M, Lee P, Moss C et al.. 2016. Cohort variation in individual body mass dissipates with age in large herbivores. Ecological Monographs. 86:517-543.

Nimegeer A, Farmer J, Munoz SA, Currie M. 2016. Community participation for rural healthcare design: description and critique of a method. Health and Social Care in the Community. 24:175-183.

Pongrac P, Potisek M, Fras A, Likar M, Budic B, Myszka K, Boros D, Necemer M, Kelemen M, Vavpetic P et al.. 2016. Composition of mineral elements and bioactive compounds in tartary buckwheat and wheat sprouts as affected by natural mineral-rich water. Journal of Cereal Science. 69:9-16.

Lin H, Jin DF, Freitag TE, Sun WC, Yu QG, Fu JR, Ma JW. 2016. A compositional shift in the soil microbiome induced by tetracycline, sulfamonomethoxine and ciprofloxacin entering a plant-soil system. Environmental Pollution. 212:440-448.

Fischer A, Eastwood A. 2016. Coproduction of ecosystem services as human-nature interactions - an analytical framework. Land Use Policy. 52:41-50.

Hillier S, Brydson R, Delbos E, Fraser T, Gray N, Pendlowski H, Phillips I, Robertson J, Wilson I. 2016. Correlations among the mineralogical and physical properties of hallyosite nanotubes (HNTs). Clay Minerals. 51:325-350.

Foyer CH, Rasool B, Davey JW, Hancock RD. 2016. Cross tolerance to biotic and abiotic stresses in plants: a focus on resistance to aphid infestation. Journal of Experimental Biology. 67:2025-2037.

Mitra A, Flynn KJ, Tillmann U, Raven JA, Caron D, Stoecker DK, Not F, Hansen PJ, Hallegraeff G, Sanders R et al.. 2016. Defining planktonic protist functional groups on mechanisms for energy and nutrient acquisition: incorporation of diverse mixotrophic strategies. Protist. 167:106-120.

Dagleish MP, Bayne CW, Moon GG, Finlayson J, Sales J, Williams J, Hodgson JC. 2016. Differences in virulence between bovine-derived clinical isolates of pasteurella multocida serotype A from the UK and the USA in a model of bovine pneumonic pasteurellosis. Journal of Comparative Pathology. 155:62-71.

Lazarova SS, Brown DJF, Oliveira CMG, Fenton B, MacKenzie K, Wright F, Malloch G, Neilson R. 2016. Diversity of endosymbiont bacteria associated with a non-filarial nematode group. Nematology. 18:615-623.

Faccioli M, Hanley N, Torres C, Riera A. 2016. Do we care about sustainability? An analysis of time sensitivity of social preferences under environmental time-persistent effects Journal of Environmental Management. 117:356-364.

Eastwood A, Brooker R, Irvine RJ, Artz RRE, Norton LR, Bullock JM, Ross L, Fielding D, Ramsay S, Roberts J et al.. 2016. Does nature conservation enhance ecosystem services delivery? Ecosystem Services. 17:152-162.

Zhang RX, Tucker MR, Burton RA, Shirley NJ, Little A, Morris J, Milne L, Houston K, Hedley PE, Waugh R et al.. 2016. The dynamics of transcript abundance during cellularization of developing barley endosperm. Plant Physiology. 170:1549-1565.

Melville LA, McBean D, Fyfe A, Campbell SJ, Palarea-Albaladejo J, Kenyon F. 2016. Effect of anthelmintic treatment strategy on strongylid nematode species composition in grazing lambs in Scotland. Parasites and Vectors. 9

Verhagen W, Van Teeffelen AJA, Compagnucci AB, Poggio L, Gimona A, Verburg NPHE, Feabreque O, Dawson LA, Demaneche S. 2016. Effects of landscape configuration on mapping ecosystem service capacity: a review of evidence and a case study in Scotland. Landscape Ecology. 31:1457-1479.

Lin H, Sun WC, Zhang ZL, Chapman SJ, Freitag TE, Fu J, Zhang X, Ma J. 2016. Effects of manure and mineral fertilization strategies on soil antibiotic resistance gene levels and microbial community in a paddy-upland rotation system. Environmental Pollution. 211:332-337.

Lin H, Sun W, Zhang Z, Chapman SJ, Freitag TE, Fu J, Zhang X, Ma J. 2016. Effects of manure and mineral fertilization strategies on soil antibiotic resistance gene levels and microbial community in a paddy-upland rotation system. Environmental Pollution. 211:332-337.

Villamuelas M, Fernandez N, Albanell E, Galvez-Ceron A, Bartolome J, Mentaberre G, Lopez-Olvera JR, Fernandez-Aguilar X, Colom-Cadena A, Lopez-Martin JM et al.. 2016. The Enhanced Vegetation Index (EVI) as a proxy for diet quality and composition in a mountain ungulate. Ecological Indicators. 61:658-666.

Campbell R, Freitag S, Bryan GJ, Stewart D, Taylor MA. 2016. Environmental and gentic factors associated with solanesol accumulation in potato leaves. Frontiers in Plant Science. 7

Lea RG, Byers AS, Sumner RN, Rhind SM, Zhang ZL, Freeman SL, Moxon R, Richardson HM, Green M, Craigon J et al.. 2016. Environmental chemicals impact dog semen quality in vitro and may be associated with a temporal decline in sperm motility and increased cryptorchidism. Scientific Reports. 6

Wylie CE, Shaw DJ, Fordyce FM, Lilly A, Pirie RS, McGorum BC. 2016. Equine grass sickness in Scotland: a case control study of environmental geochemical risk factors. Equine Veterinary Journal. 48:779-785.

Russell J, Mascher M, Dawson IK, Kyriakidis S, Calixto C, Freund F, Bayer M, Milne I, Marshall-Griffiths T, Heinen S et al.. 2016. Exome sequencing of geographically diverse barley landraces and wild relatives gives insights into environmental adaptation. Nature Genetics. 49:1024-1030.

Bolleman JT, Mungall CJ, Strozzi F, Baran J, Dumontier M, Bonnal RJP, Buels R, Hoehndorf R, Fujisawa T, Katayama T et al.. 2016. FALDO: a semantic standard for describing the location of nucleotide and protein feature annotation. Journal of Biomedical Semantics. 7

Lea RG, Amezaga MR, Loup B, Mandon-Pépin B, Stefansdottir A, Filis P, Kyle C, Zhang ZL, Allen C, Purdie L et al.. 2016. The fetal ovary exhibits temporal sensitivity to a "real-life" mixture of environmental chemicals. Scientific Reports. 6:22279.

Marcotuli I, Houston K, Schwerdt JG, Waugh R, Fincher GB, Burton RA, Blanco A, Gadaleta A. 2016. Genetic diversity and genome wide association study of beta-glucan content in tetraploid wheat grains. PLoS ONE. 11:e0152590.

Mascher M, Schuenemann VJ, Davidovich U, Marom N, Himmelbach A, Hubner S, Korol A, David M, Reiter E, Riehl S et al.. 2016. Genomic analysis of 6,000-year-old cultivated grain illuminates the domestication history of barley. Nature Genetics. 48:1089-1093.

Pyhala A, Fernandez-Llamazares A, Lehvavirta H, Byg A, Ruiz-Mallen I, Salpeteur M, Thorton TF. 2016. Global environmental change: local perceptions, understandings, and explanations. Ecology and Society. 21:ArticleNo.25.

Howland BWA, Stojanovic D, Gordon IJ, Fletcher D, Snape M, Stirnemann IA, Lindenmayer DB. 2016. Habitat preference of the striped legless lizard: Implications of grazing by native herbivores and livestock for conservation of grassland biota. Austral Ecology. 41:455-464.

Verma A, van der Wal R, Fischer A. 2016. Imagining wildlife: New technologies and animal censuses, maps and museums. Geoforum. 75:75-86.

Newey S, Mustin K, Bryce R, Fielding D, Redpath SR, Bunnefeld N, Daniel B, Irvine RJ. 2016. Impact of management on avian communities in the Scottish highlands. PLoS ONE. 11:e0155473.

Demars BOL, Gislason GM, Olafsson JS, Manson JR, Friberg N, Hood JM, Thompson JJD, Freitag TE. 2016. Impact of warming on CO2 emissions from streams countered by aquatic photosynthesis. Nature Geoscience. 9:758-761.

Farmer JG, Graham MC, Eades LJ, Lilly A, Bacon JR. 2016. Influences upon the lead isotopic composition of organic and mineral horizons in soil profiles from the National Soil Inventory of Scotland (2007-09). Science of the Total Environment. 544:730-743.

Jackson-Blake LA, Wade AJ, Futter MN, Butterfield D, Couture RM, Cox BA, Crossman J, Ekholm P, Halliday SJ, Jin L et al.. 2016. The INtegrated CAtchment model of phosphorus dynamics (INCA-P): Description and demonstration of new model structure and equations. Environmental Modelling and Software. 83:356-386.

Kaspersen BS, Jacobsen TV, Butts MB, Boegh E, Muller HG, Stutter MI, Fredenslund AM, Kjaer T. 2016. Integrating climate change mitigation into river basin management planning for the Water Framework Directive - A Danish case. Environmental Science and Policy. 55:141-150.

Cameron AR, Logie L, Patel K, Bacon S, Forteath C, Harthill J, Roberts A, Sutherland CD, Stewart D, Viollet B et al.. 2016. Investigation of salicylate hepatic responses in comparison with chemical analogues of the drug. Biochimica et Biophysica Acta - Molecular Basis of Disease. 1862:1412-1422.

Zhou JG, Haygarth PM, Withers PJA, Macleod CJA, Falloon PD, Beven KJ, Ockenden MC, Forber KJ, Hollaway MJ, Evans R et al.. 2016. Lattice Boltzmann method for the fractional advection-diffusion equation. Physical Review E. 93:ArticleNo.043310.

Pakeman RJ, Alexander J, Brooker R, Cummins R, Fielding D, Gore S, Hewison R, Mitchell R, Moore E, Erford K et al.. 2016. Long-term impacts of nitrogen deposition on coastal plant communities. Environmental Pollution. 221:337-347.

Gibson SA, Horgan GW, Francis LE, Gibson AA, Stephen AM. 2016. Low calorie beverage consumption is associated with energy and nutrient intakes and diet quality in British adults. Nutrients. 8:ArticleNo.9.

Andriotis VME, Saalbach G, Waugh R, Field RA, Smith AM. 2016. The Maltase involved in starch metabolism in barley endosperm is encoded by a single gene. PLoS One. 11:e0151642.

Fletcher J, Foster A, Goddard P, McSloy A. 2016. Managing antler problems in deer. In Practice. 38:513-519.

Allinson D, Irvine KN, Edmondson JL, Tiwary A, Hill G, Morris J, Bell M, Davies ZG, Firth SK, Fisher J et al.. 2016. Measurement and analysis of household carbon: the case of a UK city. Applied Energy. 164:871-881.