Publications list
Filters: First Letter Of Last Name is H [Clear All Filters]
In silico identification and characterization of conserved plant microRNAs in barley. Central European Journal of Biology. 9:841-852.
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2014.
Induced variations in Brassinosteroid genes define barley height and sturdiness, and expand the green revolution genetic toolkit. Plant Physiology. 166:1912-1927.
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2014.
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2014.
Kaolins and health: from first grade to first aid. Elements. 10:207-211.
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2014.
Late-season foliar urea applications can increase berry yeast-assimilable nitrogen in winegrapes (Vitis vinifera L.). American Journal of Enology and Viticulture. 65:89-95.
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2014.
Leptosphaeria spp., phoma stem canker and potential spread of L. maculans on oilseed rape crops in China. Plant Pathology. 63:598-612.
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2014.
Loss of labile carbon following soil disturbance determinded by measurement of respired d¹³CO. Soil Biology and Biochemistry. 68:125-132.
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2014.
Loss of microbial diversity in soils is coincident with reductions in some specialized functions. Environmental Microbiology. 16:2408-2420.
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2014.
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2014.
The low recombining pericentromeric region of barley restricts gene diversity and evolution but not gene expression. The Plant Journal. 79:981-992.
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2014.
Measuring the difference between actual and reported food intakes in the context of energy balance under laboratory conditions. British Journal of Nutrition. 111:2032-2043.
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2014.
Metabolic effects of elevated temperature on organic acid degradation in ripening Vitis vinifera fruit. Journal of Experimental Botany. 65:5975-5988.
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2014.
Microbial properties and nitrogen contents of arable soils under different tillage regimes. Soil Use and Management. 30:152-159.
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2014.
Modelling soil organic carbon storage with RothC in irrigated Vertisols under cotton cropping systems in the sub-tropics. Soil and Tillage Research. 143:38-49.
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2014.
Modelling the hydrological impacts of rural land use change. Hydrology Research. 45:737-754.
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2014.
Modelling the long-term response of stream water chemistry to forestry in Galloway, Southwest Scotland. Ecological Indicators. 37:396-411.
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2014.
Molecular effects of resistance elicitors from biological origin and their potential for crop protection. Frontiers in Plant Science. 5
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2014.
More plant growth but less plant defence? First global gene expression data for plants grown in soil amended with biochar Global Change Biology Bioenergy. Published online.
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2014.
Mud, muddle and models in the knowledge value-chain to action on tropical peatland conservation. Mitigation and Adaptation Strategies for Global Change. 19:887-905.
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2014.
The need to disentangle key concepts from Ecosystem Approach jargon. Conservation Biology. 28:1215-1224.
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2014.
Non-destructive automatic leaf area measurements by combining stereo and time-of-flight images. IET Computer Vision. 8:391-403.
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2014.
The North East Scotland Energy Monitoring Project: Exploring relationships between household occupants and energy usage. Energy and Buildings. 75:493-503.
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2014.
An optimised method for the extraction of bacterial mRNA from plant roots infected with Escherichia coli O157:H7. Frontiers in Microbiology Research. 5
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2014.
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2014.
Permeable reactive interceptors - blocking diffuse nutrient and greenhouse gases losses in key areas of the farming landscape. Journal of Agricultural Science. 152:S71-S81.
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2014.
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2014.
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2014.
Physiological, biochemical and molecular responses of the potato (Solanum tuberosum L.) plant to moderately elevated temperature. Plant Cell and Environment. 37:439-450.
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2014.
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2014.
Platelet-derived microparticle count and surface molecule expression differ between subjects with and without type 2 diabetes, independently of obesity status. Journal of Thrombosis and Thrombolysis. 37:455-463.
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2014.
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2014.
Post-flowering photoperiod has marked effects on fruit chemical composition in red raspberry (Rubus idaeus). Annals of Applied Biology. 165:454-465.
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2014.
Postprandial cell defense system responses to meal formulations: Stratification through gene expression profiling. Molecular Nutrition and Food Research. 58:2066-2079.
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2014.
The potential of chlorhexidine lavage to reduce the shedding of VTEC 0157 from cattle. Cattle Practice. 22:280-280.
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2014.
The PREDICTS database: a global database of how local terrestrial biodiversity responds to human impacts. Ecology and Evolution. 4:4701-4735.
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2014.
Prevalence and diversity of Escherichia coli isolated from a barley trial supplemented with bulky organic soil amendments: green compost and bovine slurry. Letters in Applied Microbiology. 58:205-212.
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2014.
Principal component analysis in the spectral analysis of the dynamic laser speckle patterns. Journal of the European Optical Society - Rapid Publications. 9:ArticleNo.14009.
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2014.
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2014.
Progress in understanding the mechanisms and functional importance of protein-membrane interactions in plants. New Phytologist. 204:741-743.
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2014.
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2014.
Pyromorphite formation in a fungal biofilm community growing on lead metal. Environmental Microbiology. 16:1441-1451.
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2014.
Quantifying preferences for the natural world using monetary and non-monetary assessments of value. Conservation Biology. 28:404-413.
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2014.
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2014.
Recently identified microbial guild mediates soil N2O sink capacity. Nature Climate Change. 4:801-805.
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2014.
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2014.
The relationship between soil inoculum and the development of Fusarium dry rot in potato cultivars Asterix and Saturna. European Journal of Plant Pathology. 146:711-714.
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2014.
Review of the annual phosphorus loss estimator tool-a new model for estimating phosphorus losses at the field scale. Soil Use and Management. 30:337-341.
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2014.
The role of mixotrophic protists in the biological carbon pump. Biogeosciences. 11:995-1005.
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2014.
The role of nitrogen deposition in widespread plant community change across semi-natural habitats. Ecosystems. 17:864-877.
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2014.
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2014.
Seasonal nitrous oxide emissions in field soils under soil management of reduced tillage, compost application or organic farming. Agriculture, Ecosystems and Environment. 189:17-180.
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2014.
A sequence-ready physical map of barley anchored genetically by two million single-nucleotide polymorphisms. Plant Physiology. 164:412-423.
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2014.
Simultaneous down-regulation of enzymes in the phenylpropanoid pathway of plants has aggregated effects on rhizosphere microbial communities. Biology and Fertility of Soils. 50:455-463.
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2014.
Socio-economic changes, social capital and implications for climate change in a changing rural Nepal. GeoJournal. Published online..
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2014.
The synaptonemal complex protein ZYP1 is required for imposition of meiotic crossovers in barley. The Plant Cell. 26:729-740.
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2014.
A systematic review of the health and well-being benefits of biodiverse environments. Journal of Toxicology and Environmental Health, Part B: Critical Reviews. 17:1-20.
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2014.
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2014.
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2014.
Top-down control by Harmonia axyridis mitigates the impact of elevated atmospheric CO2 on a plant-aphid interaction. Agricultural and Forest Entomology. 16:350-358.
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2014.
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2014.
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2014.
Transformation of vanadinite (Pb5(VO4)3Cl) by fungi. Environmental Microbiology. Published online..
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2014.
tropiTree: an NGS-based EST-SSR resource for 24 tropical tree species. PLoS ONE. 9:e102502.
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2014.
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2014.
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2014.
The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies. Journal of Biomedical Semantics. 4
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2013.
Acid-extractable potassium in agricultural soils: Source minerals according by differential and quantitative x-ray diffraction. Journal of Plant Nutrition and Soil Science. 176:407-419.
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2013.
Adapting crops and cropping systems to future climates to ensure food security: the role of crop modelling. Global Food Security. 2:24-28.
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2013.
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2013.
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2013.
The age of CO2 released from soils in contrasting ecosystems during the arctic winter. Soil Biology and Biochemistry. 63:1-4.
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2013.
Algae influence the hydrophysical parameters of a sandy soil. Catena. 108:58-68.
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2013.
Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ). Plant Journal. 76:718-727.
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2013.
Anthocyanin-enriched bilberry and blackcurrant extracts modulate amyloid precursor protein processing and alleviate behavioral abnormalities in the APP/PS1 mouse model of Alzheimer's disease. Journal of Nutritional Biochemistry. 24:360-370.
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2013.
Anticipating and managing future trade-offs and complementarities between ecosystem services. Ecology and Society, 18, 5..
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2013.
Application of Bayesian Belief Networks to quantify and map areas at risk to soil threats: using soil compaction as an example. Soil Tillage and Research. 132:56-68.
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2013.
An approach to the determination of winter chill requirements for different Ribes cultivars. Plant Biology. 15:18-27.
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2013.
Assessing the importance of soil erosion to the seedbank biodiversity in arable agro-ecosystems. Progress in Physical Geography. 37:622-641.
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2013.
Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond. Plant Journal. 76:494-505.
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2013.
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2013.
Biomechanics of nodal, seminal and lateral roots of barley: effects of diameter, waterlogging and mechanical impedance. Plant and Soil. 370:407-418.
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2013.
Biophysics of the Vadose Zone: from reality to model systems and back again. Vadose Zone Journal. 12
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2013.
Caffeoyl Shikimate Esterase (CSE) is an enzyme in the lignin biosynthetic pathway. Science. 341:1103-1106.
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2013.
Cell biology: up against the wall. Current Biology. 23:R1048-R1050.
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2013.
Characterization of cell death inducing Phytophthora capsici CRN effectors suggests diverse activities in the host nucleus. Frontiers in Plant Science. 4
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2013.
Comparison of soil carbon stocks in Scottish soils between 1978 and 2009. European Journal of Soil Science. 64:455-465.
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2013.
Concentrations and geographic distribution of selected organic pollutants in Scottish surface soils. Environmental Pollution. 182:15-27.
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2013.
Construction of reference chromosome-scale Pseudomolecules for potato: integrating the potato genome with genetic and physical maps. G3-Genomes Genomes Genetics. 3:2031-2047.
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2013.
Contributions of roots and rootstocks to sustainable, intensified crop production. Journal of Experimental Botany. 64:1209-1222.
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2013.
Control of fruit quality traits in red raspberry, a review from the James Hutton Institute. Aspects of Applied Biology. 119:1-16.
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2013.
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2013.
Decomposition of tobacco roots with modified phenylpropanoid content by fungi with contrasting lignocellulose degradation strategies. Biology and Fertility of Soils. 49:305-311.
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2013.
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2013.
Differential effects of polyphenols on proliferation and apoptosis in human myeloid and lymhoid leukemia cell lines. Anti-Cancer Agents in Medicinal Chemistry. 13:1601-1613.
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2013.
Downward migration of radiocaesium in organic soils across a transect in Scotland. Journal of Environmental Radioactivity. 115:124-133.
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2013.
Draft Genome Sequences of 17 isolates of the plant pathogenic bacterium Dickeya. Genome Announcements. 1:e00978-13.
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2013.
Draft genome sequences of four Dickeya dianthicola and four Dickeya solani strains. Genome Announcements. 1:e0087-12.
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2013.
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2013.
Editor's choice: Evaluating the potential for adverse interactions within genetically engineered breeding stacks. Plant Physiology. 161:1587-1594.
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2013.
Effectiveness of Calluna-heathland restoration methods after invasive plant control. Ecological Engineering. 54:218-226.
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2013.
The effects of population density on the breeding performance of mountain hare Lepus timidus. Wildlife Biology. 19:473-482.
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2013.
The endophytic lifestyle of Escherichia coli O157:H7: quantification and internal localization in roots. Phytopathology. 103:333-340.
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2013.
Endoscopy as a novel method for assessing endoparasite burdens in free-ranging European shags (Phalacrocorax aristotelis). Methods in Ecology and Evolution. 4:207-216.
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2013.
Environmental change impacts on the C- and N-cycle of European forests: a model comparison study. Biogeosciences. 10:1751-1773.
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2013.
Estimating the contribution of rural land uses to greenhouse gas emissions: A case study for North East Scotland. Environmental Science and Policy. 25:36-49.
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2013.
Estimating U fluxes in a high-latitude, boreal post-glacial setting using U-series isotopes in soils and rivers. Chemical Geology. 354:22-32.
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2013.
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2013.
Europe-wide dampening of population cycles in keystone herbivores. Science. 340:63-66.
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2013.
An evaluation of the IDEEA (TM) activity monitor for estimating energy expenditure. British Journal of Nutrition. 109:173-183.
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2013.
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Exploitation of interspecific diversity for monocot crop improvement. Heredity. 110:475-483.
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2013.
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2013.
The Floods and Agriculture Risk Matrix (FARM): a decision support tool for effectively communicating flood risk from farmed landscapes. International Journal of River Basin Management.. 11:237-252.
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2013.
Folate in pregnancy and imprinted gene and repeat element methylation in the offspring. American Journal of Clinical Nutrition. 97:94-99.
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2013.
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2013.
FR-H3: a new QTL to assist in the development of fall-sown barley with superior low temperature tolerance. Theoretical and Applied Genetics. 126:335-347.
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2013.
Fungal biotransformation of zinc silicate and sulfide mineral ores. Environmental Microbiology. 15:2173-2186.
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2013.
Genetic and QTL analyses of yield and a set of physiological traits in pepper. Euphytica. 190:181-201.
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Genetic diversity in caribou linked to past and future climate change. Nature Climate Change. 4:132-137.
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Global climate change and above-belowground insect herbivore interactions. Frontiers in Plant Science. 4:412.
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2013.
High prevalence of paratuberculosis in rabbits is associated with difficulties in controlling the disease in cattle. Veterinary Journal. 198:267-270.
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2013.
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2013.
Holocene evolution in weathering and erosion patterns in the Pearl River delta. Geochemistry Geophysics Geosystems. 14:2349-2368.
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2013.
How do enzymes catalysing soil nitrogen transformations respond to changing temperatures? Biology and Fertility of Soils. 49:99-103.
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Identification of genes in the VirR regulon of Pectobacterium atrosepticum and characterization of their roles in quorum sensing-dependent virulence. Environmental Microbiology. 15:687-701.
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2013.
Identification of quantitative trait loci for cane splitting in red raspberry (Rubus idaeus). Molecular Breeding. 31:111-122.
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2013.
The impact of past introductions on an iconic and economically important species, the red deer of Scotland. Journal of Heredity. 104:14-22.
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Influence of scale on thermal characteristics in a large montane river basin. River Research Applications. 29:403-419.
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2013.
An investigation using the choice experiment method into options for reducing illegal bushmeat hunting in western Serengeti. Conservation Letters. 6:37-45.
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2013.
Knowledge management for land degradation monitoring and assessment: an analysis of contemporary thinking. Land Degradation and Development. 24:307-322.
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2013.
Leaf area estimation of medium size plants using optical metrology. Revista Brasileira de Engenharia Agricola e Ambiental. 17:595-601.
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2013.
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2013.
Long-term density-dependent changes in habitat selection in red deer (Cervus elaphus). Oecologia. 173:837-847.
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2013.
Marine litter: Progress in developing an integrated policy approach in Scotland. Marine Policy. 42:49-55.
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2013.
Matching roots to their environment. Annals of Botany. 112:207-222.
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2013.
Measuring chronic social tension in groups of growing pigs using inter-individual distances. Applied Animal Behaviour Science. 146:26-36.
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2013.
A metabolic regulator modulates virulence and quorum sensing signal production in Pectobacterium atrosepticum. Molecular Plant Microbe Interactions. 26:356-366.
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2013.
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2013.
Microbial biomass phosphorus contributions to phosphorus solubility in riparian vegetated buffer strip soils. Biology and Fertility of Soils. 49:1237-1241.
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2013.
Microbial responses to carbon and nitrogen supplementation in an Antarctic dry valley soil. Soil Biology and Biochemistry. 25:55-61.
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2013.
Microbial responses to the erosional redistribution of soil organic carbon in arable fields. Soil Biology and Biochemistry. 60:195-201.
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2013.
Misuse of the phytoplanktonzooplankton dichotomy: the need to assign organisms as mixotrophs within plankton functional types. Journal of Plankton Research. 35:3-11.
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2013.
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2013.
Modelling the impact of vaccination on tuberculosis in badgers. Epidemiology and Infection. 141:1417-1427.
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2013.
Natural capital and ecosystem services, developing an appropriate soils framework as a basis for valuation. Soil Biology and Biochemistry. 57:1023-1033.
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2013.
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2013.
A novel framework for linking functional diversity of plants with other trophic levels for the quantification of ecosystem services. Journal of Vegetation Science. 24:942-948.
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2013.
A novel grass hybrid to reduce flood generation in temperate regions. Nature Scientific Reports, 3, Article no.1683..
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2013.
Observations on the epidemiology and interactions between myxomatosis, coccidiosis and helminth parasites in a wild rabbit population in Scotland. European Journal of Wildlife Research. 59:557-562.
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2013.
On the mechanism of exfoliation of "Vermiculite". Clay Minerals. 48:563-582.
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2013.
On the multifunctionality of hunting - an institutional analysis of eight cases from Europe and Africa. Journal of Environmental Planning and Management. 56:531-552.
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2013.
Overcoming resistance and resilience of an invaded community is necessary for effective restoration: a multi-site bracken control study. Journal of Applied Ecology. 50:156-167.
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2013.
Partial complementation of Sinorhizobium meliloti bacA mutant phenotypes by the Mycobacterium tuberculosis BacA protein. Journal of Bacteriology. 195:389-398.
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2013.
Pathogenesis of scrapie in ARQ/ARQ sheep after subcutaneous infection: Effect of lymphadenectomy and immune cell subset changes in relation to prion protein accumulation. Veterinary Immunology and Immunopathology. 152:348-358.
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2013.
Peri-conceptional changes in maternal exposure to sewage sludge chemicals disturbs fetal thyroid gland development in sheep. Molecular and Cellular Endocrinology. 367:98-108.
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2013.
Phylogenetic overview of the Boletineae. Fungal Biology. 117:479-511.
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Pore shape and organic compounds drive major changes in the hydrological characteristics of agricultural soils. European Journal of Soil Science. 64:334-344.
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2013.
Prediction of soil characteristics and colour using data from the National Soils Inventory of Scotland. Geoderma. 200-201:99-107.
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2013.
Priming of soil organic matter mineralisation is intrinsically insensitive to temperature. Soil Biology and Biochemistry. 66:20-28.
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2013.
Quantitative high resolution mapping of HvMLH3 foci in barley pachytene nuclei reveals a strong distal bias and weak interference. Journal of Experimental Botany. 64:2139-2154.
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Reciprocal feeding facilitation between above- and below-ground herbivores. Biology Letters. 9
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2013.
Regional-scale alteration of clear-cut forest regeneration caused by moose browsing. Forest Ecology and Management. 289:289-299.
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2013.
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2013.
Regulon studies and in planta role of the BraI/R quorum-sensing system in the plant-beneficial Burkholderia cluster. Applied and Environmental Microbiology. 79:4421-4432.
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The response of alpine Salix shrubs to long-term experimental browsing varies with elevation and herbivore density. Arctic Antarctic and Alpine Research. 45:584-593.
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The role of ecosystems and their management in regulating climate, and soil, water and air quality. Journal of Applied Ecology. 50:812-829.
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2013.
Root hairs improve root penetration, root-soil contact, and phosphorus acquisition in soils of different strength. Journal of Experimental Botany. 64:3711-3721.
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2013.
Selecting land-based mitigation practices to reduce GHG emissions from the rural land use sector: a case study of North East Scotland. Journal of Environmental Management. 120:93-104.
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Simulated browsing affects leaf shedding phenology and litter quality of oak and birch saplings. Tree Physiology. 33:438-445.
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2013.
Site-directed nucleases, a paradigm shift in predictable, knowledge-based plant breeding. Trends in Biotechnology. 31:373-383.
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2013.
The spatial distribution of canopy-resident and ground-resident cereal aphids (Sitobion avenae and Metopolophium dirhodum) in winter wheat. Arthropod-Plant Interactions. 7:21-32.
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2013.
Stochastic model-based methods for handling uncertainty in areal interpolation. International Journal of Geographical Information Science. 27:785-803.
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2013.
Top 10 plant parasitic nematodes in molecular plant pathology. Molecular Plant Pathology. 14:946-961.
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2013.
Towards a unified paradigm for sequence-based identification of fungi. Molecular Ecology. 22:5271-5277.
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2013.
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2013.
Unpredicted impacts of insect endosymbionts on interactions between soil organisms, plants and aphids. Proceedings of the Royal Society B. 280:1471-2954.
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2013.
The use of transient expression systems for the rapid production of virus-like particles in plants. Current Pharmaceutical Design. 19:5564-5573.
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